ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags26g17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479758.1| Oryza sativa (japonica cultivar-group), mRNA 371 2e-99
2dbj|AK106523.1| Oryza sativa (japonica cultivar-group) cDNA clon... 371 2e-99
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
4dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
5dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
6ref|NM_111616.1| Arabidopsis thaliana ubiquitin-protein ligase A... 74 6e-10
7gb|AC009853.4|ATAC009853 Arabidopsis thaliana chromosome III BAC... 74 6e-10
8gb|AY064647.1| Arabidopsis thaliana unknown protein (At3g07370; ... 74 6e-10
9gb|AY042807.1| Arabidopsis thaliana Unknown protein (F21O3.8) mR... 74 6e-10
10emb|BX825948.1|CNS0A6B0 Arabidopsis thaliana Full-length cDNA Co... 74 6e-10
11gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complet... 46 0.13
12emb|BX511098.5| Zebrafish DNA sequence from clone CH211-202L3 in... 44 0.52
13emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, ... 44 0.52
14dbj|AK069824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
15gb|AC148208.3| Callicebus moloch clone LB5-47E22, complete sequence 42 2.0
16gb|AC138177.12| Mus musculus chromosome 15, clone RP23-32P19, co... 42 2.0
17dbj|AK050760.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 42 2.0
18dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.0
19gb|AC171902.2| Capitella capitata clone JGIBGZA-45E7, complete s... 42 2.0
20gb|AC140945.1| Gallus gallus BAC clone TAM33-20E22 from chromoso... 42 2.0
21gb|DP000019.1| Callicebus moloch target 1 genomic scaffold 42 2.0
22ref|XM_631385.1| Dictyostelium discoideum hypothetical protein (... 40 8.1
23gb|AC120159.9| Mus musculus chromosome 19, clone RP24-408B13, co... 40 8.1
24ref|XM_419094.1| PREDICTED: Gallus gallus similar to Zinc finger... 40 8.1
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
26emb|BX545856.10| Zebrafish DNA sequence from clone DKEY-216E24 i... 40 8.1
27gb|AF532963.1| Wolbachia endosymbiont of Diabrotica barberi clon... 40 8.1
28gb|AF532962.1| Wolbachia endosymbiont of Diabrotica barberi clon... 40 8.1
29gb|AF532961.1| Wolbachia endosymbiont of Diabrotica barberi clon... 40 8.1
30emb|BX465864.12| Zebrafish DNA sequence from clone DKEY-148F24 i... 40 8.1
31ref|NM_001014315.1| Danio rerio zgc:110827 (zgc:110827), mRNA 40 8.1
32gb|AC113378.2| Homo sapiens chromosome 5 clone RP11-278A18, comp... 40 8.1
33gb|AC023426.29| Homo sapiens 12 BAC RP11-396L8 (Roswell Park Can... 40 8.1
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
35gb|AY901724.1| HIV-1 isolate 1139 protease (pol) gene, partial cds 40 8.1
36gb|BC091993.1| Danio rerio zgc:110827, mRNA (cDNA clone MGC:1108... 40 8.1
37gb|AC007037.4| Homo sapiens BAC clone RP11-119H15 from 2, comple... 40 8.1
38gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 40 8.1
39emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, ... 40 8.1
40gb|AF220605.1|AF220605 Wolbachia sp. cell-cycle protein FtsZ gen... 40 8.1
41emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15,... 40 8.1
42emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 8.1 
>ref|XM_479758.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1236

 Score =  371 bits (187), Expect = 2e-99
 Identities = 289/323 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgccgccatcgacgcctacaccggggctatagctctctgccaaaatgttgcagtatacc 60
           |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||  
Sbjct: 173 gcgccgccatcgacgcctacaccggggccatagctctctgcccaaaggttgcagtatatt 232

                                                                       
Query: 61  ggaccaaccgagcactgtgctataagaagcggaatgagtgggctaaggttgaggaagatt 120
           |||||||||||||||| ||||| |||| |||||||||||||| || || |||||||||||
Sbjct: 233 ggaccaaccgagcactttgctacaagaggcggaatgagtgggttagggctgaggaagatt 292

                                                                       
Query: 121 gtagaatggctatccattatgacagccactccgttaaggcacattacatgcttgggcttg 180
           ||||||  ||||| ||   |||||||||||| |||||||||||||||||||| |||||||
Sbjct: 293 gtagaacagctattcagcttgacagccactctgttaaggcacattacatgctcgggcttg 352

                                                                       
Query: 181 cacttctcaacaggcaagaactggctggaggaataaaagcactagaaaagtctttggagc 240
           |||||||||||| | | ||| |||| |  |||||||||| |||||| ||||| |||||||
Sbjct: 353 cacttctcaacaaggacgaattggccgagggaataaaagaactagagaagtcgttggagc 412

                                                                       
Query: 241 ttggaaggggtgcacatcctgcaagctatatggttgaagagatatggcaagagctttcta 300
           ||||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||
Sbjct: 413 ttggaaggggtgcacatccagcaagttacatggttgaagagatctggcaagagctttcta 472

                                  
Query: 301 aagcaaaatacattgaatgggaa 323
           ||||||||||||| |||||||||
Sbjct: 473 aagcaaaatacatagaatgggaa 495



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                       
Query: 495 gttcctgaccatctgtgctgcaaaattacacttgatatcttcagggatccagtgatcact 554
           |||||||| ||||| |||||||||||||| |||||||| ||||| || || ||||| || 
Sbjct: 747 gttcctgatcatctctgctgcaaaattactcttgatattttcagagacccggtgataacc 806

                                                 
Query: 555 ccaagcggaattacttatgagagggctgtgattcttga 592
           ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 807 ccaagtggaatcacgtatgagagggcggtgattcttga 844



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 370 catgtaaaaaagctctgaagagttataacagccttga 406
           |||||||| ||||||| | || |||||||||||||||
Sbjct: 542 catgtaaagaagctcttaggaattataacagccttga 578
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>dbj|AK106523.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D07, full
           insert sequence
          Length = 1236

 Score =  371 bits (187), Expect = 2e-99
 Identities = 289/323 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgccgccatcgacgcctacaccggggctatagctctctgccaaaatgttgcagtatacc 60
           |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||  
Sbjct: 173 gcgccgccatcgacgcctacaccggggccatagctctctgcccaaaggttgcagtatatt 232

                                                                       
Query: 61  ggaccaaccgagcactgtgctataagaagcggaatgagtgggctaaggttgaggaagatt 120
           |||||||||||||||| ||||| |||| |||||||||||||| || || |||||||||||
Sbjct: 233 ggaccaaccgagcactttgctacaagaggcggaatgagtgggttagggctgaggaagatt 292

                                                                       
Query: 121 gtagaatggctatccattatgacagccactccgttaaggcacattacatgcttgggcttg 180
           ||||||  ||||| ||   |||||||||||| |||||||||||||||||||| |||||||
Sbjct: 293 gtagaacagctattcagcttgacagccactctgttaaggcacattacatgctcgggcttg 352

                                                                       
Query: 181 cacttctcaacaggcaagaactggctggaggaataaaagcactagaaaagtctttggagc 240
           |||||||||||| | | ||| |||| |  |||||||||| |||||| ||||| |||||||
Sbjct: 353 cacttctcaacaaggacgaattggccgagggaataaaagaactagagaagtcgttggagc 412

                                                                       
Query: 241 ttggaaggggtgcacatcctgcaagctatatggttgaagagatatggcaagagctttcta 300
           ||||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||
Sbjct: 413 ttggaaggggtgcacatccagcaagttacatggttgaagagatctggcaagagctttcta 472

                                  
Query: 301 aagcaaaatacattgaatgggaa 323
           ||||||||||||| |||||||||
Sbjct: 473 aagcaaaatacatagaatgggaa 495



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                       
Query: 495 gttcctgaccatctgtgctgcaaaattacacttgatatcttcagggatccagtgatcact 554
           |||||||| ||||| |||||||||||||| |||||||| ||||| || || ||||| || 
Sbjct: 747 gttcctgatcatctctgctgcaaaattactcttgatattttcagagacccggtgataacc 806

                                                 
Query: 555 ccaagcggaattacttatgagagggctgtgattcttga 592
           ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 807 ccaagtggaatcacgtatgagagggcggtgattcttga 844



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 370 catgtaaaaaagctctgaagagttataacagccttga 406
           |||||||| ||||||| | || |||||||||||||||
Sbjct: 542 catgtaaagaagctcttaggaattataacagccttga 578
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  141 bits (71), Expect = 3e-30
 Identities = 89/95 (93%)
 Strand = Plus / Plus

                                                                          
Query: 229    agtctttggagcttggaaggggtgcacatcctgcaagctatatggttgaagagatatggc 288
              |||| |||||||||||||||||||||||||| ||||| || |||||||||||||| ||||
Sbjct: 712819 agtcgttggagcttggaaggggtgcacatccagcaagttacatggttgaagagatctggc 712878

                                                 
Query: 289    aagagctttctaaagcaaaatacattgaatgggaa 323
              ||||||||||||||||||||||||| |||||||||
Sbjct: 712879 aagagctttctaaagcaaaatacatagaatgggaa 712913



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                          
Query: 495    gttcctgaccatctgtgctgcaaaattacacttgatatcttcagggatccagtgatcact 554
              |||||||| ||||| |||||||||||||| |||||||| ||||| || || ||||| || 
Sbjct: 713250 gttcctgatcatctctgctgcaaaattactcttgatattttcagagacccggtgataacc 713309

                                                    
Query: 555    ccaagcggaattacttatgagagggctgtgattcttga 592
              ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 713310 ccaagtggaatcacgtatgagagggcggtgattcttga 713347



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                          
Query: 30     atagctctctgccaaaatgttgcagtataccggaccaaccgagcactgtgctataagaag 89
              ||||||||||||| ||| |||||||||||  |||||||||||||||| ||||| |||| |
Sbjct: 710319 atagctctctgcccaaaggttgcagtatattggaccaaccgagcactttgctacaagagg 710378

                   
Query: 90     cggaa 94
              |||||
Sbjct: 710379 cggaa 710383



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                          
Query: 157    aggcacattacatgcttgggcttgcacttctcaacaggcaagaactggctggaggaataa 216
              |||||||||||||||| ||||||||||||||||||| | | ||| |||| |  |||||||
Sbjct: 712411 aggcacattacatgctcgggcttgcacttctcaacaaggacgaattggccgagggaataa 712470

                        
Query: 217    aagcactaga 226
              ||| ||||||
Sbjct: 712471 aagaactaga 712480



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                         
Query: 1      gcgccgccatcgacgcctacaccgggg 27
              |||||||||||||||||||||||||||
Sbjct: 709468 gcgccgccatcgacgcctacaccgggg 709494



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                          
Query: 95     tgagtgggctaaggttgaggaagattgtagaatggctatccattatgacagccactccgt 154
              |||||||| || || |||||||||||||||||  ||||| ||   |||||||||||| ||
Sbjct: 710490 tgagtgggttagggctgaggaagattgtagaacagctattcagcttgacagccactctgt 710549

                   
Query: 155    taagg 159
              |||||
Sbjct: 710550 taagg 710554



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 370    catgtaaaaaagctctgaagagttataacagccttga 406
              |||||||| ||||||| | || |||||||||||||||
Sbjct: 713045 catgtaaagaagctcttaggaattataacagccttga 713081
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>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0427G12
          Length = 185545

 Score =  141 bits (71), Expect = 3e-30
 Identities = 89/95 (93%)
 Strand = Plus / Plus

                                                                         
Query: 229   agtctttggagcttggaaggggtgcacatcctgcaagctatatggttgaagagatatggc 288
             |||| |||||||||||||||||||||||||| ||||| || |||||||||||||| ||||
Sbjct: 12039 agtcgttggagcttggaaggggtgcacatccagcaagttacatggttgaagagatctggc 12098

                                                
Query: 289   aagagctttctaaagcaaaatacattgaatgggaa 323
             ||||||||||||||||||||||||| |||||||||
Sbjct: 12099 aagagctttctaaagcaaaatacatagaatgggaa 12133



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                         
Query: 495   gttcctgaccatctgtgctgcaaaattacacttgatatcttcagggatccagtgatcact 554
             |||||||| ||||| |||||||||||||| |||||||| ||||| || || ||||| || 
Sbjct: 12470 gttcctgatcatctctgctgcaaaattactcttgatattttcagagacccggtgataacc 12529

                                                   
Query: 555   ccaagcggaattacttatgagagggctgtgattcttga 592
             ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 12530 ccaagtggaatcacgtatgagagggcggtgattcttga 12567



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                        
Query: 30   atagctctctgccaaaatgttgcagtataccggaccaaccgagcactgtgctataagaag 89
            ||||||||||||| ||| |||||||||||  |||||||||||||||| ||||| |||| |
Sbjct: 9539 atagctctctgcccaaaggttgcagtatattggaccaaccgagcactttgctacaagagg 9598

                 
Query: 90   cggaa 94
            |||||
Sbjct: 9599 cggaa 9603



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                         
Query: 157   aggcacattacatgcttgggcttgcacttctcaacaggcaagaactggctggaggaataa 216
             |||||||||||||||| ||||||||||||||||||| | | ||| |||| |  |||||||
Sbjct: 11631 aggcacattacatgctcgggcttgcacttctcaacaaggacgaattggccgagggaataa 11690

                       
Query: 217   aagcactaga 226
             ||| ||||||
Sbjct: 11691 aagaactaga 11700



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                       
Query: 1    gcgccgccatcgacgcctacaccgggg 27
            |||||||||||||||||||||||||||
Sbjct: 8688 gcgccgccatcgacgcctacaccgggg 8714



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 95   tgagtgggctaaggttgaggaagattgtagaatggctatccattatgacagccactccgt 154
            |||||||| || || |||||||||||||||||  ||||| ||   |||||||||||| ||
Sbjct: 9710 tgagtgggttagggctgaggaagattgtagaacagctattcagcttgacagccactctgt 9769

                 
Query: 155  taagg 159
            |||||
Sbjct: 9770 taagg 9774



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 370   catgtaaaaaagctctgaagagttataacagccttga 406
             |||||||| ||||||| | || |||||||||||||||
Sbjct: 12265 catgtaaagaagctcttaggaattataacagccttga 12301
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>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0498H04
          Length = 151046

 Score =  141 bits (71), Expect = 3e-30
 Identities = 89/95 (93%)
 Strand = Plus / Plus

                                                                          
Query: 229    agtctttggagcttggaaggggtgcacatcctgcaagctatatggttgaagagatatggc 288
              |||| |||||||||||||||||||||||||| ||||| || |||||||||||||| ||||
Sbjct: 140197 agtcgttggagcttggaaggggtgcacatccagcaagttacatggttgaagagatctggc 140256

                                                 
Query: 289    aagagctttctaaagcaaaatacattgaatgggaa 323
              ||||||||||||||||||||||||| |||||||||
Sbjct: 140257 aagagctttctaaagcaaaatacatagaatgggaa 140291



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                          
Query: 495    gttcctgaccatctgtgctgcaaaattacacttgatatcttcagggatccagtgatcact 554
              |||||||| ||||| |||||||||||||| |||||||| ||||| || || ||||| || 
Sbjct: 140628 gttcctgatcatctctgctgcaaaattactcttgatattttcagagacccggtgataacc 140687

                                                    
Query: 555    ccaagcggaattacttatgagagggctgtgattcttga 592
              ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 140688 ccaagtggaatcacgtatgagagggcggtgattcttga 140725



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                          
Query: 30     atagctctctgccaaaatgttgcagtataccggaccaaccgagcactgtgctataagaag 89
              ||||||||||||| ||| |||||||||||  |||||||||||||||| ||||| |||| |
Sbjct: 137697 atagctctctgcccaaaggttgcagtatattggaccaaccgagcactttgctacaagagg 137756

                   
Query: 90     cggaa 94
              |||||
Sbjct: 137757 cggaa 137761



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                          
Query: 157    aggcacattacatgcttgggcttgcacttctcaacaggcaagaactggctggaggaataa 216
              |||||||||||||||| ||||||||||||||||||| | | ||| |||| |  |||||||
Sbjct: 139789 aggcacattacatgctcgggcttgcacttctcaacaaggacgaattggccgagggaataa 139848

                        
Query: 217    aagcactaga 226
              ||| ||||||
Sbjct: 139849 aagaactaga 139858



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                         
Query: 1      gcgccgccatcgacgcctacaccgggg 27
              |||||||||||||||||||||||||||
Sbjct: 136846 gcgccgccatcgacgcctacaccgggg 136872



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                          
Query: 95     tgagtgggctaaggttgaggaagattgtagaatggctatccattatgacagccactccgt 154
              |||||||| || || |||||||||||||||||  ||||| ||   |||||||||||| ||
Sbjct: 137868 tgagtgggttagggctgaggaagattgtagaacagctattcagcttgacagccactctgt 137927

                   
Query: 155    taagg 159
              |||||
Sbjct: 137928 taagg 137932



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 370    catgtaaaaaagctctgaagagttataacagccttga 406
              |||||||| ||||||| | || |||||||||||||||
Sbjct: 140423 catgtaaagaagctcttaggaattataacagccttga 140459
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>ref|NM_111616.1| Arabidopsis thaliana ubiquitin-protein ligase AT3G07370 mRNA,
           complete cds
          Length = 1323

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 267 tatatggttgaagagatatggcaagagctttctaaagcaaaatacattgaatgggaa 323
           |||||||| ||||| |||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 594 tatatggtagaagaaatatgggaagagctttctaaagcaaaatacatggagtgggaa 650
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>gb|AC009853.4|ATAC009853 Arabidopsis thaliana chromosome III BAC F21O3 genomic sequence,
             complete sequence
          Length = 90112

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                      
Query: 267   tatatggttgaagagatatggcaagagctttctaaagcaaaatacattgaatgggaa 323
             |||||||| ||||| |||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 33834 tatatggtagaagaaatatgggaagagctttctaaagcaaaatacatggagtgggaa 33778
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>gb|AY064647.1| Arabidopsis thaliana unknown protein (At3g07370; F21O3.8) mRNA,
           complete cds
          Length = 858

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 267 tatatggttgaagagatatggcaagagctttctaaagcaaaatacattgaatgggaa 323
           |||||||| ||||| |||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 346 tatatggtagaagaaatatgggaagagctttctaaagcaaaatacatggagtgggaa 402
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>gb|AY042807.1| Arabidopsis thaliana Unknown protein (F21O3.8) mRNA, complete cds
          Length = 1324

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 267 tatatggttgaagagatatggcaagagctttctaaagcaaaatacattgaatgggaa 323
           |||||||| ||||| |||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 594 tatatggtagaagaaatatgggaagagctttctaaagcaaaatacatggagtgggaa 650
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>emb|BX825948.1|CNS0A6B0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL75ZC05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1126

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 267 tatatggttgaagagatatggcaagagctttctaaagcaaaatacattgaatgggaa 323
           |||||||| ||||| |||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 444 tatatggtagaagaaatatgggaagagctttctaaagcaaaatacatggagtgggaa 500
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>gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complete sequence
          Length = 193015

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 292   agctttctaaagcaaaatacatt 314
             |||||||||||||||||||||||
Sbjct: 75290 agctttctaaagcaaaatacatt 75268
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>emb|BX511098.5| Zebrafish DNA sequence from clone CH211-202L3 in linkage group 5,
             complete sequence
          Length = 72481

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 203   ggctggaggaataaaagcacta 224
             ||||||||||||||||||||||
Sbjct: 55827 ggctggaggaataaaagcacta 55806
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>emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, complete sequence
          Length = 169897

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 203   ggctggaggaataaaagcacta 224
             ||||||||||||||||||||||
Sbjct: 37891 ggctggaggaataaaagcacta 37912
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>dbj|AK069824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026A06, full
           insert sequence
          Length = 1507

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 1   gcgccgccatcgacgcctacaccggggctatagctctctgcc 42
           ||||||||||||||  |||||||| |||||| ||||| ||||
Sbjct: 152 gcgccgccatcgactgctacaccgaggctatcgctctttgcc 193
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>gb|AC148208.3| Callicebus moloch clone LB5-47E22, complete sequence
          Length = 95449

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 448  tagatgaagttttcaggaaag 468
            |||||||||||||||||||||
Sbjct: 9351 tagatgaagttttcaggaaag 9331
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>gb|AC138177.12| Mus musculus chromosome 15, clone RP23-32P19, complete sequence
          Length = 180896

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    tgggcttgcacttctcaacag 193
              |||||||||||||||||||||
Sbjct: 125026 tgggcttgcacttctcaacag 125006
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>dbj|AK050760.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:D030017M07
           product:unclassifiable, full insert sequence
          Length = 1083

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 173 tgggcttgcacttctcaacag 193
           |||||||||||||||||||||
Sbjct: 701 tgggcttgcacttctcaacag 721
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 4       ccgccatcgacgcctacaccg 24
               |||||||||||||||||||||
Sbjct: 1336366 ccgccatcgacgcctacaccg 1336386
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>gb|AC171902.2| Capitella capitata clone JGIBGZA-45E7, complete sequence
          Length = 33620

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 537   agggatccagtgatcactcca 557
             |||||||||||||||||||||
Sbjct: 14214 agggatccagtgatcactcca 14234
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>gb|AC140945.1| Gallus gallus BAC clone TAM33-20E22 from chromosome ul, complete
            sequence
          Length = 143278

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 215  aaaagcactagaaaagtctttggag 239
            |||||||||| ||||||||||||||
Sbjct: 7169 aaaagcactacaaaagtctttggag 7145
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>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 448     tagatgaagttttcaggaaag 468
               |||||||||||||||||||||
Sbjct: 1656275 tagatgaagttttcaggaaag 1656255
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>ref|XM_631385.1| Dictyostelium discoideum hypothetical protein (DDB0216036), partial
            mRNA
          Length = 1392

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 366  acaacatgtaaaaaagctct 385
            ||||||||||||||||||||
Sbjct: 1152 acaacatgtaaaaaagctct 1133
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>gb|AC120159.9| Mus musculus chromosome 19, clone RP24-408B13, complete sequence
          Length = 178918

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   ataaatgagctagatgaagt 457
             ||||||||||||||||||||
Sbjct: 68086 ataaatgagctagatgaagt 68067
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>ref|XM_419094.1| PREDICTED: Gallus gallus similar to Zinc finger protein 236
           (LOC421008), mRNA
          Length = 6366

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 412 caactgcagacgtttctgaa 431
           ||||||||||||||||||||
Sbjct: 115 caactgcagacgtttctgaa 96
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 260      tgcaagctatatggttgaagagat 283
                ||||||| ||||||||||||||||
Sbjct: 35551011 tgcaagcaatatggttgaagagat 35551034
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>emb|BX545856.10| Zebrafish DNA sequence from clone DKEY-216E24 in linkage group 9,
              complete sequence
          Length = 209295

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 570    tatgagagggctgtgattct 589
              ||||||||||||||||||||
Sbjct: 105710 tatgagagggctgtgattct 105691
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>gb|AF532963.1| Wolbachia endosymbiont of Diabrotica barberi clone wolncrkend6-2
           cell division protein (ftsZ) gene, partial cds
          Length = 1055

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 aagcactagaaaagtctttg 236
           ||||||||||||||||||||
Sbjct: 23  aagcactagaaaagtctttg 42
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>gb|AF532962.1| Wolbachia endosymbiont of Diabrotica barberi clone wolncrkend6-1b
           cell division protein (ftsZ) gene, partial cds
          Length = 1055

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 aagcactagaaaagtctttg 236
           ||||||||||||||||||||
Sbjct: 23  aagcactagaaaagtctttg 42
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>gb|AF532961.1| Wolbachia endosymbiont of Diabrotica barberi clone wolncrwood5-3
           cell division protein (ftsZ) gene, partial cds
          Length = 1055

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 aagcactagaaaagtctttg 236
           ||||||||||||||||||||
Sbjct: 23  aagcactagaaaagtctttg 42
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>emb|BX465864.12| Zebrafish DNA sequence from clone DKEY-148F24 in linkage group 23,
             complete sequence
          Length = 128483

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   acacaacatgtaaaaaagct 383
             ||||||||||||||||||||
Sbjct: 40034 acacaacatgtaaaaaagct 40053
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>ref|NM_001014315.1| Danio rerio zgc:110827 (zgc:110827), mRNA
          Length = 1670

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 415 ctgcagacgtttctgaagag 434
           ||||||||||||||||||||
Sbjct: 377 ctgcagacgtttctgaagag 396
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>gb|AC113378.2| Homo sapiens chromosome 5 clone RP11-278A18, complete sequence
          Length = 93225

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   gaagagatatggcaagagct 295
             ||||||||||||||||||||
Sbjct: 22843 gaagagatatggcaagagct 22862
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>gb|AC023426.29| Homo sapiens 12 BAC RP11-396L8 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 148610

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  caaaaatgcgattctctcaa 350
            ||||||||||||||||||||
Sbjct: 3392 caaaaatgcgattctctcaa 3411
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 260      tgcaagctatatggttgaagagat 283
                ||||||| ||||||||||||||||
Sbjct: 35641083 tgcaagcaatatggttgaagagat 35641106
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>gb|AY901724.1| HIV-1 isolate 1139 protease (pol) gene, partial cds
          Length = 621

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 448 tagatgaagttttcaggaaa 467
           ||||||||||||||||||||
Sbjct: 248 tagatgaagttttcaggaaa 267
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>gb|BC091993.1| Danio rerio zgc:110827, mRNA (cDNA clone MGC:110827 IMAGE:7152202),
           complete cds
          Length = 1670

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 415 ctgcagacgtttctgaagag 434
           ||||||||||||||||||||
Sbjct: 377 ctgcagacgtttctgaagag 396
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>gb|AC007037.4| Homo sapiens BAC clone RP11-119H15 from 2, complete sequence
          Length = 168084

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 461    caggaaagctgcaaaggctgatac 484
              ||||||||||||||| ||||||||
Sbjct: 153369 caggaaagctgcaaatgctgatac 153346
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>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
             sequence
          Length = 145290

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 260   tgcaagctatatggttgaagagat 283
             ||||||| ||||||||||||||||
Sbjct: 83974 tgcaagcaatatggttgaagagat 83997
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>emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, complete sequence
          Length = 256446

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    gttttcaggaaagctgcaaa 475
              ||||||||||||||||||||
Sbjct: 117169 gttttcaggaaagctgcaaa 117150
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>gb|AF220605.1|AF220605 Wolbachia sp. cell-cycle protein FtsZ gene, partial cds
          Length = 1055

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 aagcactagaaaagtctttg 236
           ||||||||||||||||||||
Sbjct: 23  aagcactagaaaagtctttg 42
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>emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15, complete sequence
          Length = 150641

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   acacaacatgtaaaaaagct 383
             ||||||||||||||||||||
Sbjct: 39993 acacaacatgtaaaaaagct 40012
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 5       cgccatcgacgcctacaccg 24
               ||||||||||||||||||||
Sbjct: 1941208 cgccatcgacgcctacaccg 1941189


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,353,700
Number of Sequences: 3902068
Number of extensions: 5353700
Number of successful extensions: 100287
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100094
Number of HSP's gapped (non-prelim): 193
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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