ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags26g16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF479044.1| Triticum aestivum F1-ATPase mRNA, partial cds 741 0.0
2gb|AY103884.1| Zea mays PCO090977 mRNA sequence 268 2e-68
3gb|BT016671.1| Zea mays clone Contig504 mRNA sequence 230 4e-57
4dbj|AK071267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 6e-56
5dbj|AK101953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
7dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
8dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
9dbj|D10422.1|RIC480 Oryza sativa mRNA for F1-ATPase (480 gene), ... 62 2e-06
10ref|XM_482388.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.12
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
12dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
13dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
14dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
15gb|AC140438.3| Mus musculus BAC clone RP24-106N10 from 12, compl... 44 0.48
16emb|CT009764.9| Mouse DNA sequence from clone RP23-173E21 on chr... 44 0.48
17gb|AC152103.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A1, compl... 42 1.9
18ref|XM_990488.1| PREDICTED: Mus musculus hypothetical protein LO... 42 1.9
19emb|CR376773.7| Zebrafish DNA sequence from clone CH211-23E22 in... 42 1.9
20gb|AY442327.1| Homo sapiens Werner syndrome (WRN) gene, complete... 42 1.9
21emb|AL592044.4| Human DNA sequence from clone RP13-407F1 on chro... 42 1.9
22emb|AL354693.6| Human DNA sequence from clone RP11-14E8 on chrom... 42 1.9
23gb|AC009563.12| Homo sapiens chromosome 8, clone RP11-363L24, co... 42 1.9
24gb|AC092840.4| Homo sapiens BAC clone RP11-258O11 from 2, comple... 42 1.9
25emb|BX004996.8| Zebrafish DNA sequence from clone CH211-268F23 i... 42 1.9
26gb|AF181897.1|HSWRNG2 Homo sapiens WRN (WRN) gene, complete cds 42 1.9
27emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chr... 42 1.9
28emb|AL844172.8| Zebrafish DNA sequence from clone DKEY-223H12, c... 42 1.9
29gb|AY674178.1| Ixodes pacificus clone D12_IPL_P19 NPL-2 mRNA, co... 40 7.5
30emb|AL353764.9| Human DNA sequence from clone RP11-440G5 on chro... 40 7.5
31dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 7.5
32ref|NM_001038982.1| Drosophila melanogaster CG33970-RA, transcri... 40 7.5
33ref|NM_001038981.1| Drosophila melanogaster CG33970-RB, transcri... 40 7.5
34gb|AY058373.1| Drosophila melanogaster GH14066 full length cDNA 40 7.5
35gb|BT003531.1| Drosophila melanogaster RE14039 full insert cDNA 40 7.5
36ref|XM_214018.3| PREDICTED: Rattus norvegicus hypothetical LOC28... 40 7.5
37emb|AL935269.7| Zebrafish DNA sequence from clone DKEY-46J18, co... 40 7.5
38gb|AC122293.3| Mus musculus BAC clone RP23-257O9 from 10, comple... 40 7.5
39gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 7.5
40emb|AL607070.19| Mouse DNA sequence from clone RP23-31C9 on chro... 40 7.5
41gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 7.5 
>gb|AF479044.1| Triticum aestivum F1-ATPase mRNA, partial cds
          Length = 555

 Score =  741 bits (374), Expect = 0.0
 Identities = 476/510 (93%)
 Strand = Plus / Plus

                                                                       
Query: 44  ctcctcctaggtttcgctctccaccaccgcggaacgaaccggaaatggcggcgcggcacc 103
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   ctcctcctaggtttcgctccccaccaccgcggaacgaaccggaaatggcggcgcggcacc 67

                                                                       
Query: 104 tcagatccggcctcccgctcctccaagcccgcctcgcggccaccgaatccgcggccgtcg 163
           |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 68  tcagatccggcctcccgctcctccaagcccgcctcgcggctaacgaatccgcggccgtcg 127

                                                                       
Query: 164 ctcaggtatcaagggggcttgcgacgcaggtggataagcctgcggagaacaagataaagg 223
           ||||||| || ||||||||||| ||| ||| ||||||||||  |||||||||||| ||||
Sbjct: 128 ctcaggtgtcgagggggcttgcaacggaggcggataagcctaaggagaacaagatcaagg 187

                                                                       
Query: 224 ttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgcagcag 283
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 188 ttccaaaagctctgtatggtggcacgggcaactacgctagtgcgttgttccttgcagcag 247

                                                                       
Query: 284 ccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggcagtca 343
           ||||| ||||||||||||||||||||||||| ||||||  ||||||||||||||||| ||
Sbjct: 248 ccaactcaaattcgttggaaaaagttgaatctgagattctcgatgttgtaggggcagcca 307

                                                                       
Query: 344 agaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaaccaggg 403
           |||||||||||||||||||||||||||| |||||| |||||||||| |||| ||||||||
Sbjct: 308 agaagagccctatgttttctcaattcatgaaggacacatcagtgcctaaagaaaccaggg 367

                                                                       
Query: 404 tgaaggctgtaacagaaatattcgctgaagccaagttttctgacatcacacagaatttct 463
           |||||||| |||| ||||||||| ||||||||  |||| ||||||||||| |||| ||||
Sbjct: 368 tgaaggctataactgaaatattctctgaagccgggtttactgacatcacaaagaaattct 427

                                                                       
Query: 464 tgtctgtactggcgtccaatggaagactgaaatttgttgaacgcattgcggagagatttg 523
           |||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 428 tgtctgcactggcatccaatggaagactgaaatatgttgaacgcattgctgagagatttg 487

                                         
Query: 524 ttgatttgaccatggcacacaggggggagg 553
           ||||||||||||||||||| ||||||||||
Sbjct: 488 ttgatttgaccatggcacataggggggagg 517
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>gb|AY103884.1| Zea mays PCO090977 mRNA sequence
          Length = 1134

 Score =  268 bits (135), Expect = 2e-68
 Identities = 381/463 (82%)
 Strand = Plus / Plus

                                                                       
Query: 90  ggcggcgcggcacctcagatccggcctcccgctcctccaagcccgcctcgcggccaccga 149
           |||||||||||||||||||||||||||||| |||||||  |||| ||||||  || ||||
Sbjct: 127 ggcggcgcggcacctcagatccggcctccccctcctccgcgcccacctcgcatcctccga 186

                                                                       
Query: 150 atccgcggccgtcgctcaggtatcaagggggcttgcgacgcaggtggataagcctgcgga 209
           ||||||||||||||||||||| || |||||  | ||| ||||||  |  |||||  | | 
Sbjct: 187 atccgcggccgtcgctcaggtttcgaggggcttcgcgtcgcaggccgccaagcccaccgg 246

                                                                       
Query: 210 gaacaagataaaggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgtt 269
           |||  |||| ||||||||||| ||||||| ||| ||||| |||||||| || |||||  |
Sbjct: 247 gaaggagatcaaggttccaaaggctctgtttggcggcacaggcaactatgccagtgcact 306

                                                                       
Query: 270 gttccttgcagcagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgt 329
           ||||||  ||||||| ||  | ||| | ||||| ||||||||||| ||||||   | | |
Sbjct: 307 gttcctcacagcagctaaatctaatgcattggacaaagttgaatctgagattaaagctat 366

                                                                       
Query: 330 tgtaggggcagtcaagaagagccctatgttttctcaattcataaaggactcatcagtgcc 389
           ||||| |||   ||||||||||||  ||||||||||||||||||||||||  ||||| ||
Sbjct: 367 tgtagaggcttccaagaagagcccgttgttttctcaattcataaaggacttgtcagttcc 426

                                                                       
Query: 390 aaaagcaaccagggtgaaggctgtaacagaaatattcgctgaagccaagttttctgacat 449
           |||||| ||||||||||||||| || | |||||||| ||||| ||   |||||| ||  |
Sbjct: 427 aaaagcgaccagggtgaaggctatagccgaaatatttgctgacgctgggttttcagatgt 486

                                                                       
Query: 450 cacacagaatttcttgtctgtactggcgtccaatggaagactgaaatttgttgaacgcat 509
            ||| ||||||||||| |||| ||||||  |||||| || ||||||| | ||||||||||
Sbjct: 487 tacaaagaatttcttggctgtcctggcggacaatggcaggctgaaatatattgaacgcat 546

                                                      
Query: 510 tgcggagagatttgttgatttgaccatggcacacaggggggag 552
           |||||||||||||||||||||||| |||| ||| | |||||||
Sbjct: 547 tgcggagagatttgttgatttgactatggaacataagggggag 589
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>gb|BT016671.1| Zea mays clone Contig504 mRNA sequence
          Length = 1081

 Score =  230 bits (116), Expect = 4e-57
 Identities = 378/464 (81%), Gaps = 1/464 (0%)
 Strand = Plus / Plus

                                                                       
Query: 90  ggcggcgcggcac-ctcagatccggcctcccgctcctccaagcccgcctcgcggccaccg 148
           ||||||||||||| |||| | |||||||||| |||||||  |||| ||||||  || |||
Sbjct: 83  ggcggcgcggcactctcaaagccggcctccccctcctccgcgcccacctcgcatcctccg 142

                                                                       
Query: 149 aatccgcggccgtcgctcaggtatcaagggggcttgcgacgcaggtggataagcctgcgg 208
           |||||||||||||||||||||| || |||||  | ||| ||||||  |  |||||  | |
Sbjct: 143 aatccgcggccgtcgctcaggtttcgaggggcttcgcgtcgcaggccgccaagcccaccg 202

                                                                       
Query: 209 agaacaagataaaggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgt 268
            |||  |||  ||||||||||| ||||||| ||| ||||| |||||||| || |||||  
Sbjct: 203 ggaaggagagcaaggttccaaaggctctgtttggcggcacaggcaactatgccagtgcac 262

                                                                       
Query: 269 tgttccttgcagcagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatg 328
           |||||||  ||||||| ||  | ||| | ||||| ||||||||||| ||||||   | | 
Sbjct: 263 tgttcctcacagcagctaaatctaatgcattggacaaagttgaatctgagattaaagcta 322

                                                                       
Query: 329 ttgtaggggcagtcaagaagagccctatgttttctcaattcataaaggactcatcagtgc 388
           |||||| |||   ||||||||||||  ||||||||||||||||||||||||  ||||| |
Sbjct: 323 ttgtagaggcttccaagaagagcccgttgttttctcaattcataaaggacttgtcagttc 382

                                                                       
Query: 389 caaaagcaaccagggtgaaggctgtaacagaaatattcgctgaagccaagttttctgaca 448
           ||||||| ||||||||||||||| || | |||||||| ||||| ||   |||||| ||  
Sbjct: 383 caaaagcgaccagggtgaaggctatagccgaaatatttgctgacgctgggttttcagatg 442

                                                                       
Query: 449 tcacacagaatttcttgtctgtactggcgtccaatggaagactgaaatttgttgaacgca 508
           | ||| ||||||||||| |||| ||||||  |||||| || ||||||| | |||||||||
Sbjct: 443 ttacaaagaatttcttggctgtcctggcggacaatggcaggctgaaatatattgaacgca 502

                                                       
Query: 509 ttgcggagagatttgttgatttgaccatggcacacaggggggag 552
           ||||||||||||||||||||||||| |||| ||| | |||||||
Sbjct: 503 ttgcggagagatttgttgatttgactatggaacataagggggag 546
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>dbj|AK071267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086I22, full
           insert sequence
          Length = 1044

 Score =  226 bits (114), Expect = 6e-56
 Identities = 279/334 (83%)
 Strand = Plus / Plus

                                                                       
Query: 220 aaggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgca 279
           ||||||||| |||||||||||||||||||||||||||| ||||||||  |||||||| ||
Sbjct: 253 aaggttccagaagctctgtatggtggcaccggcaactatgctagtgctctgttccttaca 312

                                                                       
Query: 280 gcagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggca 339
           || ||||| || || | | |||| ||||||||| | |||||| |||||||||||| ||||
Sbjct: 313 gcggccaaagctaacttgctggacaaagttgaaactgagattcgcgatgttgtagaggca 372

                                                                       
Query: 340 gtcaagaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaacc 399
             ||||||||| ||  |||||||||||||||| |||||||  |||||||| ||||  |||
Sbjct: 373 tccaagaagagtccattgttttctcaattcattaaggacttgtcagtgcccaaagagacc 432

                                                                       
Query: 400 agggtgaaggctgtaacagaaatattcgctgaagccaagttttctgacatcacacagaat 459
           |||||||||||  |||| ||||| |||||||||||    ||||| ||  ||||| |||||
Sbjct: 433 agggtgaaggcaataactgaaattttcgctgaagctggtttttcagatgtcacaaagaat 492

                                                                       
Query: 460 ttcttgtctgtactggcgtccaatggaagactgaaatttgttgaacgcattgcggagaga 519
           |||||| |||| || ||   |||||| ||||||||     |||| |||||||| ||||||
Sbjct: 493 ttcttggctgtgctcgccgacaatggcagactgaagcacattgatcgcattgctgagaga 552

                                             
Query: 520 tttgttgatttgaccatggcacacaggggggagg 553
           ||||||||||||||||||||||| | ||||||||
Sbjct: 553 tttgttgatttgaccatggcacataagggggagg 586



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                    
Query: 87  aatggcggcgcggcacctcagatccggcctcccgctcctcc 127
           ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 141 aatggcggcgcggcacctcagatccggcctccccctcctcc 181
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>dbj|AK101953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I24, full
            insert sequence
          Length = 2362

 Score =  218 bits (110), Expect = 1e-53
 Identities = 278/334 (83%)
 Strand = Plus / Plus

                                                                        
Query: 220  aaggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgca 279
            ||||||||| |||||||||||||||||||||||||||| ||||||||  |||||||| ||
Sbjct: 1607 aaggttccagaagctctgtatggtggcaccggcaactatgctagtgctctgttccttaca 1666

                                                                        
Query: 280  gcagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggca 339
            || ||||| || || | | |||| ||||||||| | |||||| |||||||||||| ||||
Sbjct: 1667 gcggccaaagctaacttgctggacaaagttgaaactgagattcgcgatgttgtagaggca 1726

                                                                        
Query: 340  gtcaagaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaacc 399
              ||||||||| ||  |||||||||||| ||| |||||||  |||||||| ||||  |||
Sbjct: 1727 tccaagaagagtccattgttttctcaatccattaaggacttgtcagtgcccaaagagacc 1786

                                                                        
Query: 400  agggtgaaggctgtaacagaaatattcgctgaagccaagttttctgacatcacacagaat 459
            |||||||||||  |||| ||||| |||||||||||    ||||| ||  ||||| |||||
Sbjct: 1787 agggtgaaggcaataactgaaattttcgctgaagctggtttttcagatgtcacaaagaat 1846

                                                                        
Query: 460  ttcttgtctgtactggcgtccaatggaagactgaaatttgttgaacgcattgcggagaga 519
            |||||| |||| || ||   |||||| ||||||||     |||| |||||||| ||||||
Sbjct: 1847 ttcttggctgtgctcgccgacaatggcagactgaagcacattgatcgcattgctgagaga 1906

                                              
Query: 520  tttgttgatttgaccatggcacacaggggggagg 553
            ||||||||||||||||||||||| | ||||||||
Sbjct: 1907 tttgttgatttgaccatggcacataagggggagg 1940



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                     
Query: 87   aatggcggcgcggcacctcagatccggcctcccgctcctcc 127
            ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1495 aatggcggcgcggcacctcagatccggcctccccctcctcc 1535
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  178 bits (90), Expect = 1e-41
 Identities = 183/214 (85%)
 Strand = Plus / Plus

                                                                            
Query: 221      aggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgcag 280
                |||||||| |||||||||||||||||||||||||||| ||||||||  |||||||| |||
Sbjct: 26025462 aggttccagaagctctgtatggtggcaccggcaactatgctagtgctctgttccttacag 26025521

                                                                            
Query: 281      cagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggcag 340
                | ||||| || || | | |||| ||||||||| | |||||| |||||||||||| |||| 
Sbjct: 26025522 cggccaaagctaacttgctggacaaagttgaaactgagattcgcgatgttgtagaggcat 26025581

                                                                            
Query: 341      tcaagaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaacca 400
                 ||||||||| ||  |||||||||||||||| |||||||  |||||||| ||||  ||||
Sbjct: 26025582 ccaagaagagtccattgttttctcaattcattaaggacttgtcagtgcccaaagagacca 26025641

                                                  
Query: 401      gggtgaaggctgtaacagaaatattcgctgaagc 434
                ||||||||||  |||| ||||| |||||||||||
Sbjct: 26025642 gggtgaaggcaataactgaaattttcgctgaagc 26025675



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                      
Query: 500      ttgaacgcattgcggagagatttgttgatttgaccatggcacacaggggggagg 553
                |||| |||||||| ||||||||||||||||||||||||||||| | ||||||||
Sbjct: 26026159 ttgatcgcattgctgagagatttgttgatttgaccatggcacataagggggagg 26026212



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                         
Query: 87       aatggcggcgcggcacctcagatccggcctcccgctcctcc 127
                ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 26024588 aatggcggcgcggcacctcagatccggcctccccctcctcc 26024628



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 102      cctcagatccggcctcccgctcctcc 127
                |||||||||||||||||| |||||||
Sbjct: 13638902 cctcagatccggcctccctctcctcc 13638877
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>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1226_A12
          Length = 113025

 Score =  178 bits (90), Expect = 1e-41
 Identities = 183/214 (85%)
 Strand = Plus / Plus

                                                                         
Query: 221   aggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgcag 280
             |||||||| |||||||||||||||||||||||||||| ||||||||  |||||||| |||
Sbjct: 63320 aggttccagaagctctgtatggtggcaccggcaactatgctagtgctctgttccttacag 63379

                                                                         
Query: 281   cagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggcag 340
             | ||||| || || | | |||| ||||||||| | |||||| |||||||||||| |||| 
Sbjct: 63380 cggccaaagctaacttgctggacaaagttgaaactgagattcgcgatgttgtagaggcat 63439

                                                                         
Query: 341   tcaagaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaacca 400
              ||||||||| ||  |||||||||||||||| |||||||  |||||||| ||||  ||||
Sbjct: 63440 ccaagaagagtccattgttttctcaattcattaaggacttgtcagtgcccaaagagacca 63499

                                               
Query: 401   gggtgaaggctgtaacagaaatattcgctgaagc 434
             ||||||||||  |||| ||||| |||||||||||
Sbjct: 63500 gggtgaaggcaataactgaaattttcgctgaagc 63533



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                   
Query: 500   ttgaacgcattgcggagagatttgttgatttgaccatggcacacaggggggagg 553
             |||| |||||||| ||||||||||||||||||||||||||||| | ||||||||
Sbjct: 64017 ttgatcgcattgctgagagatttgttgatttgaccatggcacataagggggagg 64070



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                      
Query: 87    aatggcggcgcggcacctcagatccggcctcccgctcctcc 127
             ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 62446 aatggcggcgcggcacctcagatccggcctccccctcctcc 62486
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>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0062J02
          Length = 151636

 Score =  178 bits (90), Expect = 1e-41
 Identities = 183/214 (85%)
 Strand = Plus / Plus

                                                                        
Query: 221  aggttccaaaagctctgtatggtggcaccggcaactacgctagtgcgttgttccttgcag 280
            |||||||| |||||||||||||||||||||||||||| ||||||||  |||||||| |||
Sbjct: 4707 aggttccagaagctctgtatggtggcaccggcaactatgctagtgctctgttccttacag 4766

                                                                        
Query: 281  cagccaacgcaaattcgttggaaaaagttgaatccgagattggcgatgttgtaggggcag 340
            | ||||| || || | | |||| ||||||||| | |||||| |||||||||||| |||| 
Sbjct: 4767 cggccaaagctaacttgctggacaaagttgaaactgagattcgcgatgttgtagaggcat 4826

                                                                        
Query: 341  tcaagaagagccctatgttttctcaattcataaaggactcatcagtgccaaaagcaacca 400
             ||||||||| ||  |||||||||||||||| |||||||  |||||||| ||||  ||||
Sbjct: 4827 ccaagaagagtccattgttttctcaattcattaaggacttgtcagtgcccaaagagacca 4886

                                              
Query: 401  gggtgaaggctgtaacagaaatattcgctgaagc 434
            ||||||||||  |||| ||||| |||||||||||
Sbjct: 4887 gggtgaaggcaataactgaaattttcgctgaagc 4920



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                  
Query: 500  ttgaacgcattgcggagagatttgttgatttgaccatggcacacaggggggagg 553
            |||| |||||||| ||||||||||||||||||||||||||||| | ||||||||
Sbjct: 5404 ttgatcgcattgctgagagatttgttgatttgaccatggcacataagggggagg 5457



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                     
Query: 87   aatggcggcgcggcacctcagatccggcctcccgctcctcc 127
            ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3833 aatggcggcgcggcacctcagatccggcctccccctcctcc 3873
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>dbj|D10422.1|RIC480 Oryza sativa mRNA for F1-ATPase (480 gene), partial sequence
          Length = 490

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 81/99 (81%)
 Strand = Plus / Plus

                                                                       
Query: 455 agaatttcttgtctgtactggcgtccaatggaagactgaaatttgttgaacgcattgcgg 514
           ||||||||||| |||| || ||   |||||||||||||||     |||| || ||||| |
Sbjct: 45  agaatttcttggctgtgctcgcngacaatggaagactgaagcacattgatcgnattgctg 104

                                                  
Query: 515 agagatttgttgatttgaccatggcacacaggggggagg 553
           |||||||||||||||||  ||||||||| | ||||||||
Sbjct: 105 agagatttgttgatttgnncatggcacataagggggagg 143
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>ref|XM_482388.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 672

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 88  atggcggcgcggcacctcagatccggcctcc 118
           |||||||||||||||  ||||||||||||||
Sbjct: 349 atggcggcgcggcacgccagatccggcctcc 379
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 88       atggcggcgcggcacctcagatccggcctcc 118
                |||||||||||||||  ||||||||||||||
Sbjct: 19762794 atggcggcgcggcacgccagatccggcctcc 19762824
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0007M04
          Length = 176293

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 88    atggcggcgcggcacctcagatccggcctcc 118
             |||||||||||||||  ||||||||||||||
Sbjct: 91745 atggcggcgcggcacgccagatccggcctcc 91775
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>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021N09
          Length = 156565

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 102   cctcagatccggcctcccgctcctcc 127
             |||||||||||||||||| |||||||
Sbjct: 46235 cctcagatccggcctccctctcctcc 46210
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>dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0459H02
          Length = 168230

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 102    cctcagatccggcctcccgctcctcc 127
              |||||||||||||||||| |||||||
Sbjct: 167392 cctcagatccggcctccctctcctcc 167367
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>gb|AC140438.3| Mus musculus BAC clone RP24-106N10 from 12, complete sequence
          Length = 154736

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 397   accagggtgaaggctgtaacag 418
             ||||||||||||||||||||||
Sbjct: 30956 accagggtgaaggctgtaacag 30935
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>emb|CT009764.9| Mouse DNA sequence from clone RP23-173E21 on chromosome 12, complete
             sequence
          Length = 214925

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 397   accagggtgaaggctgtaacag 418
             ||||||||||||||||||||||
Sbjct: 78220 accagggtgaaggctgtaacag 78199
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>gb|AC152103.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A1, complete sequence
          Length = 40624

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    ttcgctctccaccaccgcgga 76
             |||||||||||||||||||||
Sbjct: 19554 ttcgctctccaccaccgcgga 19574
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>ref|XM_990488.1| PREDICTED: Mus musculus hypothetical protein LOC667420 (LOC667420),
           mRNA
          Length = 507

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 120 gctcctccaagcccgcctcgcggcc 144
           ||||||||||||||| |||||||||
Sbjct: 269 gctcctccaagcccggctcgcggcc 245
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>emb|CR376773.7| Zebrafish DNA sequence from clone CH211-23E22 in linkage group 17,
              complete sequence
          Length = 167088

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 443    ctgacatcacacagaatttct 463
              |||||||||||||||||||||
Sbjct: 158055 ctgacatcacacagaatttct 158035
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>gb|AY442327.1| Homo sapiens Werner syndrome (WRN) gene, complete cds
          Length = 143624

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 353    ctatgttttctcaattcataa 373
              |||||||||||||||||||||
Sbjct: 133095 ctatgttttctcaattcataa 133075
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>emb|AL592044.4| Human DNA sequence from clone RP13-407F1 on chromosome 13, complete
              sequence
          Length = 236130

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 440    tttctgacatcacacagaatttctt 464
              |||||||||||| ||||||||||||
Sbjct: 170638 tttctgacatcatacagaatttctt 170614
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>emb|AL354693.6| Human DNA sequence from clone RP11-14E8 on chromosome 1 Contains the
             part of the EDARADD gene for EDAR-associated death domain
             and two CpG islands, complete sequence
          Length = 78986

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    cctcctccccgacccgatctc 43
             |||||||||||||||||||||
Sbjct: 24119 cctcctccccgacccgatctc 24099
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>gb|AC009563.12| Homo sapiens chromosome 8, clone RP11-363L24, complete sequence
          Length = 189944

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 353    ctatgttttctcaattcataa 373
              |||||||||||||||||||||
Sbjct: 101499 ctatgttttctcaattcataa 101519
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>gb|AC092840.4| Homo sapiens BAC clone RP11-258O11 from 2, complete sequence
          Length = 133042

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 353    ctatgttttctcaattcataa 373
              |||||||||||||||||||||
Sbjct: 127281 ctatgttttctcaattcataa 127301
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>emb|BX004996.8| Zebrafish DNA sequence from clone CH211-268F23 in linkage group 6,
              complete sequence
          Length = 167320

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 443    ctgacatcacacagaatttct 463
              |||||||||||||||||||||
Sbjct: 134965 ctgacatcacacagaatttct 134945
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>gb|AF181897.1|HSWRNG2 Homo sapiens WRN (WRN) gene, complete cds
          Length = 87543

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 353   ctatgttttctcaattcataa 373
             |||||||||||||||||||||
Sbjct: 45123 ctatgttttctcaattcataa 45103
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>emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chromosome 2, complete
              sequence
          Length = 209053

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 120    gctcctccaagcccgcctcgcggcc 144
              ||||||||||||||| |||||||||
Sbjct: 181888 gctcctccaagcccggctcgcggcc 181912
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>emb|AL844172.8| Zebrafish DNA sequence from clone DKEY-223H12, complete sequence
          Length = 163195

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 364    caattcataaaggactcatca 384
              |||||||||||||||||||||
Sbjct: 126120 caattcataaaggactcatca 126100
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>gb|AY674178.1| Ixodes pacificus clone D12_IPL_P19 NPL-2 mRNA, complete cds
          Length = 237

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 gccaccgaatccgcggccgt 161
           ||||||||||||||||||||
Sbjct: 189 gccaccgaatccgcggccgt 170
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>emb|AL353764.9| Human DNA sequence from clone RP11-440G5 on chromosome 9 Contains the
             NFIL3 gene for interleukin 3 regulated nuclear factor, a
             novel gene and two CpG islands, complete sequence
          Length = 170898

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   atgttttctcaattcataaa 374
             ||||||||||||||||||||
Sbjct: 47439 atgttttctcaattcataaa 47420
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ccggaaatggcggcgcggca 101
              ||||||||||||||||||||
Sbjct: 346237 ccggaaatggcggcgcggca 346218
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>ref|NM_001038982.1| Drosophila melanogaster CG33970-RA, transcript variant A (CG33970),
            mRNA
          Length = 3387

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 516  gagatttgttgatttgacca 535
            ||||||||||||||||||||
Sbjct: 2220 gagatttgttgatttgacca 2201
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>ref|NM_001038981.1| Drosophila melanogaster CG33970-RB, transcript variant B (CG33970),
           mRNA
          Length = 2025

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 516 gagatttgttgatttgacca 535
           ||||||||||||||||||||
Sbjct: 858 gagatttgttgatttgacca 839
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>gb|AY058373.1| Drosophila melanogaster GH14066 full length cDNA
          Length = 1574

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 516 gagatttgttgatttgacca 535
           ||||||||||||||||||||
Sbjct: 391 gagatttgttgatttgacca 372
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>gb|BT003531.1| Drosophila melanogaster RE14039 full insert cDNA
          Length = 3401

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 516  gagatttgttgatttgacca 535
            ||||||||||||||||||||
Sbjct: 2220 gagatttgttgatttgacca 2201
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>ref|XM_214018.3| PREDICTED: Rattus norvegicus hypothetical LOC289530 (predicted)
           (LOC289530), mRNA
          Length = 1163

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  ctcttcctcctccccgaccc 37
           ||||||||||||||||||||
Sbjct: 447 ctcttcctcctccccgaccc 466
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>emb|AL935269.7| Zebrafish DNA sequence from clone DKEY-46J18, complete sequence
          Length = 177658

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    cctcccgctcctccaagccc 133
              ||||||||||||||||||||
Sbjct: 175039 cctcccgctcctccaagccc 175020
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>gb|AC122293.3| Mus musculus BAC clone RP23-257O9 from 10, complete sequence
          Length = 209942

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 480   caatggaagactgaaatttg 499
             ||||||||||||||||||||
Sbjct: 60939 caatggaagactgaaatttg 60920
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    cgagattggcgatgttgtag 334
              ||||||||||||||||||||
Sbjct: 304271 cgagattggcgatgttgtag 304252
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>emb|AL607070.19| Mouse DNA sequence from clone RP23-31C9 on chromosome 4, complete
              sequence
          Length = 215106

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 229    aaagctctgtatggtggcaccggc 252
              |||||||||||||||| |||||||
Sbjct: 196174 aaagctctgtatggtgacaccggc 196197
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 82      ccggaaatggcggcgcggca 101
               ||||||||||||||||||||
Sbjct: 1274567 ccggaaatggcggcgcggca 1274586


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,290,267
Number of Sequences: 3902068
Number of extensions: 5290267
Number of successful extensions: 96507
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96271
Number of HSP's gapped (non-prelim): 229
length of query: 553
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 530
effective length of database: 17,143,297,704
effective search space: 9085947783120
effective search space used: 9085947783120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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