ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags26g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450275.1| Oryza sativa (japonica cultivar-group), mRNA 396 e-107
2dbj|AK059394.1| Oryza sativa (japonica cultivar-group) cDNA clon... 396 e-107
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
4dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
5dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
6dbj|AK068062.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 6e-37
7gb|AC116593.4| Mus musculus BAC clone RP24-91C7 from chromosome ... 46 0.10
8gb|AC158528.1| Mus musculus BAC clone RP23-259G7 from chromosome... 46 0.10
9ref|XM_391231.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 44 0.41
10emb|AL109953.24|HSDJ746H2 Human DNA sequence from clone RP4-746H... 44 0.41
11gb|AC068135.5| Homo sapiens BAC clone RP11-764E7 from 2, complet... 44 0.41
12ref|NM_102571.2| Arabidopsis thaliana unknown protein AT1G28060 ... 42 1.6
13emb|AL450386.17| Human DNA sequence from clone RP11-466B20 on ch... 42 1.6
14gb|AY126993.1| Arabidopsis thaliana At1g28060/F13K9_16 mRNA, com... 42 1.6
15gb|BT002294.1| Arabidopsis thaliana At1g28060/F13K9_16 mRNA, com... 42 1.6
16ref|XM_629085.1| Dictyostelium discoideum hypothetical protein (... 40 6.5
17gb|AC132910.8| Mus musculus chromosome 17, clone RP24-301I14, co... 40 6.5
18gb|AC108097.3| Homo sapiens chromosome 16 clone RP11-109P11, com... 40 6.5
19emb|AL136370.4| Human DNA sequence from clone RP11-101E13 on chr... 40 6.5
20emb|AL355927.1|NCB1D1 Neurospora crassa DNA linkage group II BAC... 40 6.5
21gb|AC092332.4| Homo sapiens chromosome 16 clone RP11-18F14, comp... 40 6.5
22gb|AC113611.3| Homo sapiens BAC clone RP11-421M20 from 4, comple... 40 6.5
23gb|AF276892.1|AF276892 Neurospora crassa carbamoylphosphate:L-or... 40 6.5 
>ref|XM_450275.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1755

 Score =  396 bits (200), Expect = e-107
 Identities = 407/476 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   gatgctgtgaagcgagcacaagagcttgctgctaagatgggatttcgccaggacccacag 61
           |||||||||||||||||||| || ||||||||||||||||||||  | ||||| ||||| 
Sbjct: 1   gatgctgtgaagcgagcacaggaacttgctgctaagatgggattcagacaggatccacaa 60

                                                                       
Query: 62  tttgcacctcttatcaacatgttccctggtacatctggtgaactgactgttcctcaaaga 121
           ||||| ||||| |||||  |||| |||||||||||   |||||| ||||| ||||||| |
Sbjct: 61  tttgcgcctctcatcaatttgtttcctggtacatcctctgaactaactgtgcctcaaaaa 120

                                                                       
Query: 122 cctgccaaggctcctgttctccgactcgatgatcaaggtagggaaattgatgagaatgga 181
           ||||| ||||| ||||||||||| || |||| ||| |||||||||||||||||  |||| 
Sbjct: 121 cctgcgaaggcacctgttctccgtcttgatgctcagggtagggaaattgatgaacatggg 180

                                                                       
Query: 182 aatgttatcagcatgaccaaaccaagcaacctgagtactctaaaggttaacattaacaag 241
           |||||||||| ||||||||| |||| |||  |||| |||||||| |||||||| || |||
Sbjct: 181 aatgttatcaacatgaccaagccaaccaatttgagcactctaaaagttaacataaataag 240

                                                                       
Query: 242 cagaagaaggatgcattccaaattatcaaaccagacttggagtcgcttgcaaaagctact 301
           || |||||||| || |||||||| ||||||||||||||||| || ||||||||| | | |
Sbjct: 241 caaaagaaggaagctttccaaataatcaaaccagacttggattcccttgcaaaatcaagt 300

                                                                       
Query: 302 gttcattttgatgaaaggatgggcatcaacccaactaagctccttcgtcctaaaaggcca 361
           |  || ||||||||||||||||||||||||| ||  |||||||| || |||| |||||| 
Sbjct: 301 gcacactttgatgaaaggatgggcatcaaccaaaacaagctcctccgccctagaaggcct 360

                                                                       
Query: 362 ggattccagtttattgaggaaggcaaactttcgaggcaggctgaattgcagaggattaag 421
           ||||| |||||||||||||| || |||||||| ||||| |||||  ||||||| ||||||
Sbjct: 361 ggatttcagtttattgaggagggaaaactttcaaggcaagctgagctgcagagaattaag 420

                                                                   
Query: 422 aaccaatttggcgaagcacaagccaaagagctcaaagtaaagcaagctcaacttgc 477
           || |||||||| ||||||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 421 aatcaatttggtgaagcacaagctaaagaacttaaagtaaaacaagctcaacttgc 476
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>dbj|AK059394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-H12, full
           insert sequence
          Length = 1755

 Score =  396 bits (200), Expect = e-107
 Identities = 407/476 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   gatgctgtgaagcgagcacaagagcttgctgctaagatgggatttcgccaggacccacag 61
           |||||||||||||||||||| || ||||||||||||||||||||  | ||||| ||||| 
Sbjct: 1   gatgctgtgaagcgagcacaggaacttgctgctaagatgggattcagacaggatccacaa 60

                                                                       
Query: 62  tttgcacctcttatcaacatgttccctggtacatctggtgaactgactgttcctcaaaga 121
           ||||| ||||| |||||  |||| |||||||||||   |||||| ||||| ||||||| |
Sbjct: 61  tttgcgcctctcatcaatttgtttcctggtacatcctctgaactaactgtgcctcaaaaa 120

                                                                       
Query: 122 cctgccaaggctcctgttctccgactcgatgatcaaggtagggaaattgatgagaatgga 181
           ||||| ||||| ||||||||||| || |||| ||| |||||||||||||||||  |||| 
Sbjct: 121 cctgcgaaggcacctgttctccgtcttgatgctcagggtagggaaattgatgaacatggg 180

                                                                       
Query: 182 aatgttatcagcatgaccaaaccaagcaacctgagtactctaaaggttaacattaacaag 241
           |||||||||| ||||||||| |||| |||  |||| |||||||| |||||||| || |||
Sbjct: 181 aatgttatcaacatgaccaagccaaccaatttgagcactctaaaagttaacataaataag 240

                                                                       
Query: 242 cagaagaaggatgcattccaaattatcaaaccagacttggagtcgcttgcaaaagctact 301
           || |||||||| || |||||||| ||||||||||||||||| || ||||||||| | | |
Sbjct: 241 caaaagaaggaagctttccaaataatcaaaccagacttggattcccttgcaaaatcaagt 300

                                                                       
Query: 302 gttcattttgatgaaaggatgggcatcaacccaactaagctccttcgtcctaaaaggcca 361
           |  || ||||||||||||||||||||||||| ||  |||||||| || |||| |||||| 
Sbjct: 301 gcacactttgatgaaaggatgggcatcaaccaaaacaagctcctccgccctagaaggcct 360

                                                                       
Query: 362 ggattccagtttattgaggaaggcaaactttcgaggcaggctgaattgcagaggattaag 421
           ||||| |||||||||||||| || |||||||| ||||| |||||  ||||||| ||||||
Sbjct: 361 ggatttcagtttattgaggagggaaaactttcaaggcaagctgagctgcagagaattaag 420

                                                                   
Query: 422 aaccaatttggcgaagcacaagccaaagagctcaaagtaaagcaagctcaacttgc 477
           || |||||||| ||||||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 421 aatcaatttggtgaagcacaagctaaagaacttaaagtaaaacaagctcaacttgc 476
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  184 bits (93), Expect = 2e-43
 Identities = 192/225 (85%)
 Strand = Plus / Minus

                                                                           
Query: 1       ggatgctgtgaagcgagcacaagagcttgctgctaagatgggatttcgccaggacccaca 60
               ||||||||||||||||||||| || ||||||||||||||||||||  | ||||| |||||
Sbjct: 3698953 ggatgctgtgaagcgagcacaggaacttgctgctaagatgggattcagacaggatccaca 3698894

                                                                           
Query: 61      gtttgcacctcttatcaacatgttccctggtacatctggtgaactgactgttcctcaaag 120
                ||||| ||||| |||||  |||| |||||||||||   |||||| ||||| ||||||| 
Sbjct: 3698893 atttgcgcctctcatcaatttgtttcctggtacatcctctgaactaactgtgcctcaaaa 3698834

                                                                           
Query: 121     acctgccaaggctcctgttctccgactcgatgatcaaggtagggaaattgatgagaatgg 180
               |||||| ||||| ||||||||||| || |||| ||| |||||||||||||||||  ||||
Sbjct: 3698833 acctgcgaaggcacctgttctccgtcttgatgctcagggtagggaaattgatgaacatgg 3698774

                                                            
Query: 181     aaatgttatcagcatgaccaaaccaagcaacctgagtactctaaa 225
                |||||||||| ||||||||| |||| |||  |||| ||||||||
Sbjct: 3698773 gaatgttatcaacatgaccaagccaaccaatttgagcactctaaa 3698729



 Score =  161 bits (81), Expect = 3e-36
 Identities = 168/197 (85%)
 Strand = Plus / Minus

                                                                           
Query: 225     aggttaacattaacaagcagaagaaggatgcattccaaattatcaaaccagacttggagt 284
               |||||||||| || ||||| |||||||| || |||||||| ||||||||||||||||| |
Sbjct: 3698638 aggttaacataaataagcaaaagaaggaagctttccaaataatcaaaccagacttggatt 3698579

                                                                           
Query: 285     cgcttgcaaaagctactgttcattttgatgaaaggatgggcatcaacccaactaagctcc 344
               | ||||||||| | | ||  || ||||||||||||||||||||||||| ||  |||||||
Sbjct: 3698578 cccttgcaaaatcaagtgcacactttgatgaaaggatgggcatcaaccaaaacaagctcc 3698519

                                                                           
Query: 345     ttcgtcctaaaaggccaggattccagtttattgaggaaggcaaactttcgaggcaggctg 404
               | || |||| |||||| ||||| |||||||||||||| || |||||||| ||||| ||||
Sbjct: 3698518 tccgccctagaaggcctggatttcagtttattgaggagggaaaactttcaaggcaagctg 3698459

                                
Query: 405     aattgcagaggattaag 421
               |  ||||||| ||||||
Sbjct: 3698458 agctgcagagaattaag 3698442



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                         
Query: 420     agaaccaatttggcgaagcacaagccaaagagctcaaagtaaagcaagctcaacttgc 477
               |||| |||||||| ||||||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 3698353 agaatcaatttggtgaagcacaagctaaagaacttaaagtaaaacaagctcaacttgc 3698296
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>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1695_A02
          Length = 156214

 Score =  184 bits (93), Expect = 2e-43
 Identities = 192/225 (85%)
 Strand = Plus / Minus

                                                                          
Query: 1      ggatgctgtgaagcgagcacaagagcttgctgctaagatgggatttcgccaggacccaca 60
              ||||||||||||||||||||| || ||||||||||||||||||||  | ||||| |||||
Sbjct: 107214 ggatgctgtgaagcgagcacaggaacttgctgctaagatgggattcagacaggatccaca 107155

                                                                          
Query: 61     gtttgcacctcttatcaacatgttccctggtacatctggtgaactgactgttcctcaaag 120
               ||||| ||||| |||||  |||| |||||||||||   |||||| ||||| ||||||| 
Sbjct: 107154 atttgcgcctctcatcaatttgtttcctggtacatcctctgaactaactgtgcctcaaaa 107095

                                                                          
Query: 121    acctgccaaggctcctgttctccgactcgatgatcaaggtagggaaattgatgagaatgg 180
              |||||| ||||| ||||||||||| || |||| ||| |||||||||||||||||  ||||
Sbjct: 107094 acctgcgaaggcacctgttctccgtcttgatgctcagggtagggaaattgatgaacatgg 107035

                                                           
Query: 181    aaatgttatcagcatgaccaaaccaagcaacctgagtactctaaa 225
               |||||||||| ||||||||| |||| |||  |||| ||||||||
Sbjct: 107034 gaatgttatcaacatgaccaagccaaccaatttgagcactctaaa 106990



 Score =  161 bits (81), Expect = 3e-36
 Identities = 168/197 (85%)
 Strand = Plus / Minus

                                                                          
Query: 225    aggttaacattaacaagcagaagaaggatgcattccaaattatcaaaccagacttggagt 284
              |||||||||| || ||||| |||||||| || |||||||| ||||||||||||||||| |
Sbjct: 106899 aggttaacataaataagcaaaagaaggaagctttccaaataatcaaaccagacttggatt 106840

                                                                          
Query: 285    cgcttgcaaaagctactgttcattttgatgaaaggatgggcatcaacccaactaagctcc 344
              | ||||||||| | | ||  || ||||||||||||||||||||||||| ||  |||||||
Sbjct: 106839 cccttgcaaaatcaagtgcacactttgatgaaaggatgggcatcaaccaaaacaagctcc 106780

                                                                          
Query: 345    ttcgtcctaaaaggccaggattccagtttattgaggaaggcaaactttcgaggcaggctg 404
              | || |||| |||||| ||||| |||||||||||||| || |||||||| ||||| ||||
Sbjct: 106779 tccgccctagaaggcctggatttcagtttattgaggagggaaaactttcaaggcaagctg 106720

                               
Query: 405    aattgcagaggattaag 421
              |  ||||||| ||||||
Sbjct: 106719 agctgcagagaattaag 106703



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                        
Query: 420    agaaccaatttggcgaagcacaagccaaagagctcaaagtaaagcaagctcaacttgc 477
              |||| |||||||| ||||||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 106614 agaatcaatttggtgaagcacaagctaaagaacttaaagtaaaacaagctcaacttgc 106557
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>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1116_H10
          Length = 101054

 Score =  184 bits (93), Expect = 2e-43
 Identities = 192/225 (85%)
 Strand = Plus / Minus

                                                                        
Query: 1    ggatgctgtgaagcgagcacaagagcttgctgctaagatgggatttcgccaggacccaca 60
            ||||||||||||||||||||| || ||||||||||||||||||||  | ||||| |||||
Sbjct: 6255 ggatgctgtgaagcgagcacaggaacttgctgctaagatgggattcagacaggatccaca 6196

                                                                        
Query: 61   gtttgcacctcttatcaacatgttccctggtacatctggtgaactgactgttcctcaaag 120
             ||||| ||||| |||||  |||| |||||||||||   |||||| ||||| ||||||| 
Sbjct: 6195 atttgcgcctctcatcaatttgtttcctggtacatcctctgaactaactgtgcctcaaaa 6136

                                                                        
Query: 121  acctgccaaggctcctgttctccgactcgatgatcaaggtagggaaattgatgagaatgg 180
            |||||| ||||| ||||||||||| || |||| ||| |||||||||||||||||  ||||
Sbjct: 6135 acctgcgaaggcacctgttctccgtcttgatgctcagggtagggaaattgatgaacatgg 6076

                                                         
Query: 181  aaatgttatcagcatgaccaaaccaagcaacctgagtactctaaa 225
             |||||||||| ||||||||| |||| |||  |||| ||||||||
Sbjct: 6075 gaatgttatcaacatgaccaagccaaccaatttgagcactctaaa 6031



 Score =  161 bits (81), Expect = 3e-36
 Identities = 168/197 (85%)
 Strand = Plus / Minus

                                                                        
Query: 225  aggttaacattaacaagcagaagaaggatgcattccaaattatcaaaccagacttggagt 284
            |||||||||| || ||||| |||||||| || |||||||| ||||||||||||||||| |
Sbjct: 5940 aggttaacataaataagcaaaagaaggaagctttccaaataatcaaaccagacttggatt 5881

                                                                        
Query: 285  cgcttgcaaaagctactgttcattttgatgaaaggatgggcatcaacccaactaagctcc 344
            | ||||||||| | | ||  || ||||||||||||||||||||||||| ||  |||||||
Sbjct: 5880 cccttgcaaaatcaagtgcacactttgatgaaaggatgggcatcaaccaaaacaagctcc 5821

                                                                        
Query: 345  ttcgtcctaaaaggccaggattccagtttattgaggaaggcaaactttcgaggcaggctg 404
            | || |||| |||||| ||||| |||||||||||||| || |||||||| ||||| ||||
Sbjct: 5820 tccgccctagaaggcctggatttcagtttattgaggagggaaaactttcaaggcaagctg 5761

                             
Query: 405  aattgcagaggattaag 421
            |  ||||||| ||||||
Sbjct: 5760 agctgcagagaattaag 5744



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                      
Query: 420  agaaccaatttggcgaagcacaagccaaagagctcaaagtaaagcaagctcaacttgc 477
            |||| |||||||| ||||||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 5655 agaatcaatttggtgaagcacaagctaaagaacttaaagtaaaacaagctcaacttgc 5598
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>dbj|AK068062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F10, full
           insert sequence
          Length = 1517

 Score =  163 bits (82), Expect = 6e-37
 Identities = 145/166 (87%)
 Strand = Plus / Plus

                                                                       
Query: 312 atgaaaggatgggcatcaacccaactaagctccttcgtcctaaaaggccaggattccagt 371
           ||||||||||||||||||||| ||  |||||||| || |||| |||||| ||||| ||||
Sbjct: 2   atgaaaggatgggcatcaaccaaaacaagctcctccgccctagaaggcctggatttcagt 61

                                                                       
Query: 372 ttattgaggaaggcaaactttcgaggcaggctgaattgcagaggattaagaaccaatttg 431
           |||||||||| || |||||||| ||||| |||||  ||||||| |||||||| |||||||
Sbjct: 62  ttattgaggagggaaaactttcaaggcaagctgagctgcagagaattaagaatcaatttg 121

                                                         
Query: 432 gcgaagcacaagccaaagagctcaaagtaaagcaagctcaacttgc 477
           | ||||||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 122 gtgaagcacaagctaaagaacttaaagtaaaacaagctcaacttgc 167
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>gb|AC116593.4| Mus musculus BAC clone RP24-91C7 from chromosome 8, complete sequence
          Length = 174603

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 239   aagcagaagaaggatgcattcca 261
             |||||||||||||||||||||||
Sbjct: 18429 aagcagaagaaggatgcattcca 18407
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>gb|AC158528.1| Mus musculus BAC clone RP23-259G7 from chromosome 8, complete
            sequence
          Length = 180194

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 239  aagcagaagaaggatgcattcca 261
            |||||||||||||||||||||||
Sbjct: 8693 aagcagaagaaggatgcattcca 8715
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>ref|XM_391231.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG11055.1)
            partial mRNA
          Length = 1821

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 163  ggaaattgatgagaatggaaat 184
            ||||||||||||||||||||||
Sbjct: 1485 ggaaattgatgagaatggaaat 1506
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>emb|AL109953.24|HSDJ746H2 Human DNA sequence from clone RP4-746H2 on chromosome 20 Contains the
             MRPS11P1 gene for mitochondrial ribosmal protein S11
             pseudogene 1, complete sequence
          Length = 148859

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 396   ggcaggctgaattgcagaggat 417
             ||||||||||||||||||||||
Sbjct: 45234 ggcaggctgaattgcagaggat 45255
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>gb|AC068135.5| Homo sapiens BAC clone RP11-764E7 from 2, complete sequence
          Length = 164736

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 336    ctaagctccttcgtcctaaaaggcca 361
              |||||||||||| |||||||||||||
Sbjct: 158387 ctaagctccttcttcctaaaaggcca 158412
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>ref|NM_102571.2| Arabidopsis thaliana unknown protein AT1G28060 mRNA, complete cds
          Length = 2604

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 195  tgaccaaaccaagcaacctgagtactctaaaggttaacattaacaagcagaagaaggatg 254
            |||| ||||||||||| || |||||  | ||||||||||| |||||  ||||||| ||||
Sbjct: 1135 tgactaaaccaagcaatcttagtacattgaaggttaacataaacaaaaagaagaaagatg 1194

             
Query: 255  c 255
            |
Sbjct: 1195 c 1195
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>emb|AL450386.17| Human DNA sequence from clone RP11-466B20 on chromosome 10 Contains a
             novel gene and a CpG island, complete sequence
          Length = 91331

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 349   tcctaaaaggccaggattcca 369
             |||||||||||||||||||||
Sbjct: 36206 tcctaaaaggccaggattcca 36186
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>gb|AY126993.1| Arabidopsis thaliana At1g28060/F13K9_16 mRNA, complete cds
          Length = 2605

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 195  tgaccaaaccaagcaacctgagtactctaaaggttaacattaacaagcagaagaaggatg 254
            |||| ||||||||||| || |||||  | ||||||||||| |||||  ||||||| ||||
Sbjct: 1135 tgactaaaccaagcaatcttagtacattgaaggttaacataaacaaaaagaagaaagatg 1194

             
Query: 255  c 255
            |
Sbjct: 1195 c 1195
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>gb|BT002294.1| Arabidopsis thaliana At1g28060/F13K9_16 mRNA, complete cds
          Length = 2361

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 195  tgaccaaaccaagcaacctgagtactctaaaggttaacattaacaagcagaagaaggatg 254
            |||| ||||||||||| || |||||  | ||||||||||| |||||  ||||||| ||||
Sbjct: 1106 tgactaaaccaagcaatcttagtacattgaaggttaacataaacaaaaagaagaaagatg 1165

             
Query: 255  c 255
            |
Sbjct: 1166 c 1166
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>ref|XM_629085.1| Dictyostelium discoideum hypothetical protein (DDB0192084), partial
           mRNA
          Length = 792

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 162 gggaaattgatgagaatggaaatgttat 189
           ||||||||| | ||||||||||||||||
Sbjct: 104 gggaaattgttaagaatggaaatgttat 131
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>gb|AC132910.8| Mus musculus chromosome 17, clone RP24-301I14, complete sequence
          Length = 209975

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   ttcctcaaagacctgccaag 130
             ||||||||||||||||||||
Sbjct: 10683 ttcctcaaagacctgccaag 10664
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>gb|AC108097.3| Homo sapiens chromosome 16 clone RP11-109P11, complete sequence
          Length = 181387

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   ttcctcaaagacctgccaaggctc 134
             ||||||||||||||||| ||||||
Sbjct: 16781 ttcctcaaagacctgcccaggctc 16758
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>emb|AL136370.4| Human DNA sequence from clone RP11-101E13 on chromosome 1q31.2-31.3
             Contains a zinc finger protein 101 (ZNF101) pseudogene,
             the UCHL5 gene for ubiquitin carboxyl-terminal hydrolase
             L5, the SSA2 gene for Sjogren syndrome antigen A2 (60kDa,
             ribonucleoprotein autoantigen SS-A/Ro), the GLRX2 gene for
             glutaredoxin 2 and two CpG islands, complete sequence
          Length = 147978

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   aaggtagggaaattgatgagaatg 179
             ||||||||||||||||||| ||||
Sbjct: 97220 aaggtagggaaattgatgaaaatg 97243
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>emb|AL355927.1|NCB1D1 Neurospora crassa DNA linkage group II BAC clone B1D1
          Length = 76072

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   tagggaaattgatgagaatg 179
             ||||||||||||||||||||
Sbjct: 13576 tagggaaattgatgagaatg 13557
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>gb|AC092332.4| Homo sapiens chromosome 16 clone RP11-18F14, complete sequence
          Length = 155886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 111   ttcctcaaagacctgccaaggctc 134
             ||||||||||||||||| ||||||
Sbjct: 34562 ttcctcaaagacctgcccaggctc 34585
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>gb|AC113611.3| Homo sapiens BAC clone RP11-421M20 from 4, complete sequence
          Length = 60597

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   gattccagtttattgaggaa 382
             ||||||||||||||||||||
Sbjct: 17523 gattccagtttattgaggaa 17542
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>gb|AF276892.1|AF276892 Neurospora crassa carbamoylphosphate:L-ornithine
           carbamoyltransferase precursor gene, nuclear gene
           encoding mitochondrial protein, complete cds; and
           unknown gene
          Length = 2959

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 tagggaaattgatgagaatg 179
           ||||||||||||||||||||
Sbjct: 141 tagggaaattgatgagaatg 160


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,465,975
Number of Sequences: 3902068
Number of extensions: 4465975
Number of successful extensions: 97211
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97142
Number of HSP's gapped (non-prelim): 64
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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