ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26g03 |
|---|---|
| Clone Library Name | barley_pub |
>DRL25_ARATH (O50052) Putative disease resistance protein At4g19050| Length = 1181 Score = 41.6 bits (96), Expect = 5e-04 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Frame = +2 Query: 41 TLWLSQL--LSAQTFTTSILTFCSLELLHLDCCPRLLHVFPLASRKSGRFFCSYLQTLEI 214 TLW+S L L++ + F +L+ L +DCCP + +FP L+ L + Sbjct: 1054 TLWISNLPLLTSLYSSKGGFIFKNLKKLSVDCCPSIKWLFPEIP--------DNLEILRV 1105 Query: 215 VYCDDLREVFPLAPGRQKQDTIIEFPYLRSIHLHEVPKL 331 +CD L +F + G E LR +HL ++P L Sbjct: 1106 KFCDKLERLFEVKAG--------ELSKLRKLHLLDLPVL 1136
>DRL36_ARATH (Q8VZC7) Probable disease resistance protein At5g45510| Length = 1202 Score = 33.1 bits (74), Expect = 0.17 Identities = 21/67 (31%), Positives = 36/67 (53%) Frame = +2 Query: 41 TLWLSQLLSAQTFTTSILTFCSLELLHLDCCPRLLHVFPLASRKSGRFFCSYLQTLEIVY 220 TL ++ LLS +T + I +L+ L LDCCP++ +FP + L L + + Sbjct: 1106 TLSITNLLSLETISF-IAKLENLKNLSLDCCPKIKTIFPEMP--------ASLPVLNLKH 1156 Query: 221 CDDLREV 241 C++L +V Sbjct: 1157 CENLEKV 1163
>DRL14_ARATH (Q9SI85) Probable disease resistance protein At1g62630 (pNd4)| Length = 893 Score = 32.0 bits (71), Expect = 0.37 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +2 Query: 185 FCSYLQTLEIVYCDDLREVFPLAPGRQKQDT-IIEFPYLRSIHLHEVPKLQRXY 343 F L++L +V DL ++ + +D+ I+ FP L+ ++L ++PKL+ Y Sbjct: 762 FAPKLRSLSVVDAKDLEDIINEEKACEGEDSGIVPFPELKYLNLDDLPKLKNIY 815
>DRL19_ARATH (Q9C8T9) Putative disease resistance protein At1g63350| Length = 898 Score = 31.6 bits (70), Expect = 0.49 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 1/96 (1%) Frame = +2 Query: 89 ILTFCSLELLHLDCCPRLLHVFPLASRKSGRFFCSYLQTLEIVYCDDLREVFPLAPGRQK 268 I +F SL ++L C RL + L F L+ L +V + L ++ Sbjct: 731 ICSFSSLIEVNLSNCRRLRELTFL-------MFAPNLKRLHVVSSNQLEDIINKEKAHDG 783 Query: 269 QDT-IIEFPYLRSIHLHEVPKLQRXYGCRMXAPKLE 373 + + I+ FP L +HL+ + +L+ Y + P LE Sbjct: 784 EKSGIVPFPKLNELHLYNLRELKNIYWSPLPFPCLE 819
>DRL20_ARATH (Q9SH22) Putative disease resistance protein At1g63360| Length = 884 Score = 30.8 bits (68), Expect = 0.83 Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +2 Query: 185 FCSYLQTLEIVYCDDLREVFPLAPGRQKQDT-IIEFPYLRSIHLHEVPKLQRXY 343 F +++L + + DL ++ + +++ I+ FP L + LH++PKL++ Y Sbjct: 760 FAPKIRSLSVWHAKDLEDIINEEKACEGEESGILPFPELNFLTLHDLPKLKKIY 813
>RPS5_ARATH (O64973) Disease resistance protein RPS5 (Resistance to Pseudomonas| syringae protein 5) (pNd3/pNd10) Length = 889 Score = 30.8 bits (68), Expect = 0.83 Identities = 16/63 (25%), Positives = 30/63 (47%) Frame = +2 Query: 185 FCSYLQTLEIVYCDDLREVFPLAPGRQKQDTIIEFPYLRSIHLHEVPKLQRXYGCRMXAP 364 F L LE+ + ++ ++ + TI+ F L ++HL E+ L+R Y + P Sbjct: 766 FAPNLTFLEVGFSKEVEDIISEEKAEEHSATIVPFRKLETLHLFELRGLKRIYAKALHFP 825 Query: 365 KLE 373 L+ Sbjct: 826 CLK 828
>F113A_HUMAN (Q9H1Q7) Protein FAM113A (Sarcoma antigen NY-SAR-23)| Length = 454 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = -3 Query: 282 IIVSCFWRPGAKGKTSLRSSQYTISRVCK*LQKNLPDFLLAKGNTCKSLGQQ 127 II SC W G+ S+ S + + RV + + LPD L N LG++ Sbjct: 138 IINSCLWDLSRYGRCSMESYRENLERVFVRMDQVLPDSCLLVWNMAMPLGER 189
>F113A_MOUSE (Q6P1Z5) Protein FAM113A| Length = 449 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = -3 Query: 282 IIVSCFWRPGAKGKTSLRSSQYTISRVCK*LQKNLPDFLLAKGNTCKSLGQQ 127 II SC W G+ S+ S + + RV + + LPD L N LG++ Sbjct: 138 IINSCLWDLSRYGRCSMESYRENLERVFVRMDQVLPDSCLLVWNLAMPLGER 189
>PP2B1_YEAST (P23287) Serine/threonine-protein phosphatase 2B catalytic subunit| A1 (EC 3.1.3.16) (Calcineurin A1) (Calmodulin-binding protein 1) Length = 553 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Frame = +2 Query: 83 TSILTFCSLELLH------LDCCPRLLHVFPLASRKSGRFFC 190 TS TF + E+LH D C R +V PLA+ +G++FC Sbjct: 186 TSYFTFKN-EMLHKYDMEVYDACCRSFNVLPLAALMNGQYFC 226
>YP18_YEAST (Q06489) Hypothetical 45.0 kDa protein in PIS1-CLB2 intergenic| region Length = 411 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/66 (33%), Positives = 29/66 (43%) Frame = +2 Query: 23 ALGVWXTLWLSQLLSAQTFTTSILTFCSLELLHLDCCPRLLHVFPLASRKSGRFFCSYLQ 202 ALGV +LW L + L + CPR+ HVFPL +R + S L Sbjct: 194 ALGVIRSLWKDSLAKTDKADSG---------LDNEKCPRMGHVFPLETRPYNQ--GSRLT 242 Query: 203 TLEIVY 220 E+VY Sbjct: 243 AYELVY 248
>RIMM_HAEIN (P44568) 16S rRNA-processing protein rimM| Length = 178 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = -3 Query: 246 GKTSLRSSQYTISRVCK*LQKNLPDFLLAKGNTCKSLGQQSRCNNSRLQKV--RIDVVNV 73 G T + YT+ V + ++ D L+ K NT + G+Q R ++V R+D+ Sbjct: 109 GCTVVNLEGYTMGTVTEMMETGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLTTK 168 Query: 72 CADRSWD 52 + WD Sbjct: 169 TIEVDWD 175
>RIMM_HAEI8 (Q4QNY7) 16S rRNA-processing protein rimM| Length = 178 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = -3 Query: 246 GKTSLRSSQYTISRVCK*LQKNLPDFLLAKGNTCKSLGQQSRCNNSRLQKV--RIDVVNV 73 G T + YT+ V + ++ D L+ K NT + G+Q R ++V R+D+ Sbjct: 109 GCTVVNLEGYTMGTVTEMMETGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLTTK 168 Query: 72 CADRSWD 52 + WD Sbjct: 169 TIEVDWD 175
>OTSA_SALTY (P0A1Q0) Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC| 2.4.1.15) (Trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase) Length = 472 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 Query: 218 YCDDLREVFPLAPGRQKQDTIIEFPYL 298 + DL+EV P +P RQ+Q+ + FP L Sbjct: 445 FIHDLKEVTPRSPERQQQNNVATFPKL 471
>OTSA_SALTI (P0A1Q1) Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC| 2.4.1.15) (Trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase) Length = 472 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 Query: 218 YCDDLREVFPLAPGRQKQDTIIEFPYL 298 + DL+EV P +P RQ+Q+ + FP L Sbjct: 445 FIHDLKEVTPRSPERQQQNNVATFPKL 471
>ATG2_NEUCR (Q871L5) Autophagy-related protein 2| Length = 2011 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +3 Query: 69 HRHLPRQFLPFVAWSCCTWTVAPGSYMCSPWPAESQGG 182 + H + + A+S T+ PG+YM W AES+GG Sbjct: 434 YSHEEAESMYMSAFSDAHSTLMPGAYMPGGWGAESEGG 471
>GPR15_PANTR (Q9BG77) G-protein coupled receptor 15 (BOB)| Length = 360 Score = 28.9 bits (63), Expect = 3.2 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +2 Query: 23 ALGVWXTLWLSQLLSAQTFTTSILTFCSLELLHLDCCPRLLH-VFPLASRKSGRFFCSYL 199 +LG+W T S L ++ S+ CS+ LL R L V+P+ SRK R C+Y+ Sbjct: 95 SLGLWRTG--SFLCKGSSYMISVNMHCSVLLLTCMSVDRYLAIVWPVVSRKFRRTDCAYV 152
>GPR15_HUMAN (P49685) G-protein coupled receptor 15 (BOB)| Length = 360 Score = 28.9 bits (63), Expect = 3.2 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +2 Query: 23 ALGVWXTLWLSQLLSAQTFTTSILTFCSLELLHLDCCPRLLH-VFPLASRKSGRFFCSYL 199 +LG+W T S L ++ S+ CS+ LL R L V+P+ SRK R C+Y+ Sbjct: 95 SLGLWRTG--SFLCKGSSYMISVNMHCSVLLLTCMSVDRYLAIVWPVVSRKFRRTDCAYV 152
>FLGB_AQUAE (O67244) Flagellar basal-body rod protein flgB| Length = 124 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -1 Query: 197 NNYKRTSLTFCWPRGTHVRAWGNSPGATTPGYKR*ELTW*MSVPT 63 N YK+ + F W R H GN A TP YKR +L + + PT Sbjct: 8 NLYKKY-INFTWKR--HKVLLGNLANADTPNYKRRDLIFFLEPPT 49
>ELK3_MOUSE (P41971) ETS domain-containing protein Elk-3 (ETS-related protein| NET) (ETS-related protein ERP) Length = 409 Score = 28.9 bits (63), Expect = 3.2 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = +2 Query: 140 LLHVFPLASRKSGRFFCSYLQTLEIVYCDDLREVFPLAPGR-QKQDTIIEFPYLRSIHLH 316 L F A SG F S I + L V PL+P R Q +T+ +FP L + H+ Sbjct: 328 LTPAFFTAQTPSGLFLASSPLLPSIHFWSSLSPVAPLSPARLQGPNTLFQFPTLLNGHMP 387 Query: 317 -EVPKLQR 337 +P L R Sbjct: 388 VPLPSLDR 395
>CR8AA_BACUK (Q45704) Pesticidal crystal protein cry8Aa (Insecticidal| delta-endotoxin CryVIIIA(a)) (Crystaline entomocidal protoxin) (131 kDa crystal protein) Length = 1157 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/58 (32%), Positives = 27/58 (46%) Frame = -3 Query: 219 YTISRVCK*LQKNLPDFLLAKGNTCKSLGQQSRCNNSRLQKVRIDVVNVCADRSWDNH 46 YTI + KN+PD LL + S G +RC+ + R++ N RS D H Sbjct: 818 YTIRHQTNRIVKNVPDDLLPDVSPVNSDGSINRCSEQKYVNSRLEGEN----RSGDAH 871
>Y1501_RHIME (Q92Q49) Hypothetical zinc metalloprotease R01501 (EC 3.4.24.-)| Length = 374 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Frame = -1 Query: 182 TSLTFCW-PRGTHVRAWGNSPGATTPGYKR*ELTW*MSVPTEAGTTIMSXRRLK 24 T FC P G +V+ +G+ A+TP Y+R E P E G T + + K Sbjct: 61 TRWKFCAVPLGGYVKFFGDEDAASTPDYRRLETI----APEERGRTFLGAKLWK 110
>PRLR_HUMAN (P16471) Prolactin receptor precursor (PRL-R)| Length = 622 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = -3 Query: 288 NSIIVSCFWRPGAKGKTSLRSSQYTISRVCK*LQKNLPDFLLAKGNTC 145 N +C+WRPG G S T R + L PD++ N+C Sbjct: 40 NKETFTCWWRPGTDGGLPTNYS-LTYHREGETLMHECPDYITGGPNSC 86
>PHLB2_MOUSE (Q8K1N2) Pleckstrin homology-like domain family B member 2 (Protein| LL5-beta) Length = 1249 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -2 Query: 325 GDLMQVDAPQIGKFYNCILFLAPRGQRED 239 G L VD G + FLAPRG R D Sbjct: 509 GSLQDVDVAGFGNLGHSASFLAPRGSRSD 537
>RLPA_SALTY (Q8ZR01) Rare lipoprotein A precursor| Length = 381 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -3 Query: 123 RCNNSRLQKVRIDVVNVCADRSWDNHNVXQTPKAGRTTALP 1 R N S KVRID + V D S + T A +T ALP Sbjct: 157 RLNTSNNTKVRIDPIIVAPDGSLSGPGMACTTVAKQTYALP 197
>RLPA_SALTI (Q8Z8I0) Rare lipoprotein A precursor| Length = 377 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -3 Query: 123 RCNNSRLQKVRIDVVNVCADRSWDNHNVXQTPKAGRTTALP 1 R N S KVRID + V D S + T A +T ALP Sbjct: 157 RLNTSNNTKVRIDPIIVAPDGSLSGPGMACTTVAKQTYALP 197
>RLPA_ECOLI (P10100) Rare lipoprotein A precursor| Length = 362 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -3 Query: 123 RCNNSRLQKVRIDVVNVCADRSWDNHNVXQTPKAGRTTALP 1 R N S KVRID + V D S + T A +T ALP Sbjct: 155 RLNTSNNTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALP 195
>RLPA_ECO57 (Q8XBQ1) Rare lipoprotein A precursor| Length = 362 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -3 Query: 123 RCNNSRLQKVRIDVVNVCADRSWDNHNVXQTPKAGRTTALP 1 R N S KVRID + V D S + T A +T ALP Sbjct: 155 RLNTSNNTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALP 195
>FLGD_BUCAI (P57421) Basal-body rod modification protein flgD| Length = 236 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 10/68 (14%) Frame = -3 Query: 267 FWRPGAKGKTSLRSSQYTISRVCK*LQKNLP----------DFLLAKGNTCKSLGQQSRC 118 FW K S+ S QY IS + K +N+P +++ GN LG+ + Sbjct: 167 FWDGQDLNKNSVMSGQYNISVIAKKNNQNIPVNSLSVGVVNSIIMSSGNAIIDLGESGQI 226 Query: 117 NNSRLQKV 94 ++++ Sbjct: 227 TPLSIREI 234
>CR8BA_BACUK (Q45705) Pesticidal crystal protein cry8Ba (Insecticidal| delta-endotoxin CryVIIIB(a)) (Crystaline entomocidal protoxin) (134 kDa crystal protein) Length = 1169 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = -3 Query: 219 YTISRVCK*LQKNLPDFLLAKGNTCKSLGQQSRCNNSRLQKVRIDVVN 76 YTI + KN+PD LL + G+ +RC+ + R++V N Sbjct: 814 YTIRHQTNRIVKNVPDDLLPDVPPVNNDGRINRCSEQKYVNSRLEVEN 861
>CI038_HUMAN (Q9UI66) Protein C9orf38| Length = 118 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 212 SLGSANNYKRTSLTFCWPRGTHVRAW 135 SLG+ +NYK T L P H R+W Sbjct: 71 SLGAKHNYKATCLMRFLPLQRHTRSW 96
>POLG_KUNJM (P14335) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3433 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 Query: 212 SLGSANNYKRTSLTFCWPRGTHVRAWGNSPG 120 ++G A+N KR +F +G R WGN G Sbjct: 366 TMGEAHNDKRADPSFVCKQGVVDRGWGNGCG 396
>RLPA_YERPE (Q8ZDG6) Rare lipoprotein A precursor| Length = 360 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -3 Query: 123 RCNNSRLQKVRIDVVNVCADRSWDNHNVXQTPKAGRTTALP 1 R N S KV+ID +NV D S + T A ++ ALP Sbjct: 152 RLNISNNTKVKIDFINVAPDGSLSGPGMVGTTIAKQSYALP 192
>POLG_STEVM (P09732) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 1525 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = -1 Query: 206 GSANNYKRTSLTFCWPRGTHVRAWGNSPG 120 G A+N KR+ TF R R WGN G Sbjct: 366 GEAHNTKRSDPTFVCKRDVVDRGWGNGCG 394
>PANC_BUCAP (Q8K9U7) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 285 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +2 Query: 200 QTLEIVYCDDLREVFPLAPGRQKQDTIIEFPYLRSI 307 + +EI++C D+ E++PL K T I+ P L I Sbjct: 85 EKVEILFCPDVNEMYPLG---LKNHTYIDVPKLSKI 117
>POLG_WNV (P06935) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; F Length = 3430 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -1 Query: 212 SLGSANNYKRTSLTFCWPRGTHVRAWGNSPG 120 ++G A+N KR F +G R WGN G Sbjct: 366 TMGEAHNEKRADPAFVCKQGVVDRGWGNGCG 396
>TBB_SCHPO (P05219) Tubulin beta chain (Beta tubulin)| Length = 448 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = +2 Query: 218 YCDDLREVFPLAPGRQKQDTIIEFPYLRSIHLHEV 322 Y D + F +AP + DT++E PY ++ +H++ Sbjct: 159 YPDRMMATFSVAPAPKSSDTVVE-PYNATLSMHQL 192 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,349,397 Number of Sequences: 219361 Number of extensions: 1198504 Number of successful extensions: 3278 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3201 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3277 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
