ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags26f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY846828.1| Triticum aestivum ribosomal protein L7 mRNA, comp... 268 5e-69
2ref|XM_473801.1| Oryza sativa (japonica cultivar-group), predic... 204 6e-50
3dbj|AK073472.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 6e-50
4gb|AY109992.1| Zea mays CL9168_1 mRNA sequence 188 3e-45
5gb|BT016468.1| Zea mays clone Contig301 mRNA sequence 172 2e-40
6gb|AY104655.1| Zea mays PCO101521 mRNA sequence 167 1e-38
7ref|XM_480842.1| Oryza sativa (japonica cultivar-group), mRNA 153 2e-34
8dbj|AK102873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 2e-34
9gb|AY103677.1| Zea mays PCO099976 mRNA sequence 153 2e-34
10gb|BT017565.1| Zea mays clone EL01N0425H11.c mRNA sequence 141 7e-31
11emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4,... 131 7e-28
12emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4,... 131 7e-28
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 131 7e-28
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 100 2e-18
15dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic D... 100 2e-18
16ref|NM_020877.2| Homo sapiens dynein heavy chain domain 3 (DNHD3... 42 0.50
17gb|AC087388.9| Homo sapiens chromosome 17, clone RP11-199F11, co... 42 0.50
18dbj|AB040936.2| Homo sapiens mRNA for KIAA1503 protein, partial cds 42 0.50
19gb|AY130402.1| Branchiostoma lanceolatum ribosomal protein L7 mR... 42 0.50
20gb|AC025335.25| Homo sapiens chromosome 17, clone RP11-404G1, co... 42 0.50
21gb|BC034225.1| Homo sapiens dynein heavy chain domain 3, mRNA (c... 42 0.50
22gb|AC139213.11| Mus musculus chromosome 7, clone RP23-341H2, com... 40 2.0
23emb|AL161916.8| Human DNA sequence from clone RP4-636O23 on chro... 40 2.0
24emb|BX068796.1|CNS09P8W Single read from an extremity of a full-... 40 2.0
25emb|BX059760.1|CNS09I9W Single read from an extremity of a full-... 40 2.0
26emb|BX049726.1|CNS09AJ6 Single read from an extremity of a full-... 40 2.0
27emb|BX049091.1|CNS09A1J Single read from an extremity of a full-... 40 2.0
28emb|BX010349.1|CNS08G5D Single read from an extremity of a full-... 40 2.0
29gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 2.0
30emb|AL844208.5| Mouse DNA sequence from clone RP23-354D14 on chr... 40 2.0
31ref|NM_126186.2| Arabidopsis thaliana structural constituent of ... 38 7.8
32ref|NM_202576.1| Arabidopsis thaliana structural constituent of ... 38 7.8
33ref|NM_202575.1| Arabidopsis thaliana structural constituent of ... 38 7.8
34ref|NM_112204.2| Arabidopsis thaliana structural constituent of ... 38 7.8
35gb|AC157211.7| Mus musculus chromosome 1, clone RP23-204C6, comp... 38 7.8
36gb|AC147480.13| Mus musculus chromosome 14, clone RP23-429N24, c... 38 7.8
37ref|XM_593300.2| PREDICTED: Bos taurus similar to WD repeat doma... 38 7.8
38ref|XM_426275.1| PREDICTED: Gallus gallus similar to Gab3 protei... 38 7.8
39gb|AC102771.13| Mus musculus chromosome 1, clone RP23-175K23, co... 38 7.8
40gb|AC165092.3| Mus musculus BAC clone RP23-10M2 from chromosome ... 38 7.8
41ref|XM_544653.2| PREDICTED: Canis familiaris similar to WD repea... 38 7.8
42ref|XM_754632.1| Ustilago maydis 521 hypothetical protein (UM035... 38 7.8
43gb|AC122233.4| Mus musculus BAC clone RP23-137D14 from 16, compl... 38 7.8
44gb|AF362512.1| Campoletis sonorensis ichnovirus segment H, compl... 38 7.8
45gb|AY079328.1| Arabidopsis thaliana putative ribosomal protein L... 38 7.8
46gb|AY045994.1| Arabidopsis thaliana putative ribosomal protein L... 38 7.8
47gb|AC165146.3| Mus musculus BAC clone RP24-378G3 from chromosome... 38 7.8
48emb|AL662930.29| Mouse DNA sequence from clone RP23-212B18 on ch... 38 7.8
49gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 38 7.8
50gb|AY081698.1| Arabidopsis thaliana 60S ribosomal protein L7 (At... 38 7.8
51gb|AY077675.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, comp... 38 7.8
52gb|CP000264.1| Jannaschia sp. CCS1, complete genome 38 7.8
53gb|AC161250.2| Mus musculus BAC clone RP24-553E23 from chromosom... 38 7.8
54gb|AY056112.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, comp... 38 7.8
55gb|AY039900.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, comp... 38 7.8
56gb|AF370484.1|AF370484 Arabidopsis thaliana 60S ribosomal protei... 38 7.8
57emb|BX818796.1|CNS0A9X8 Arabidopsis thaliana Full-length cDNA Co... 38 7.8
58emb|BX822214.1|CNS0A5Y3 Arabidopsis thaliana Full-length cDNA Co... 38 7.8
59emb|BX824301.1|CNS0A5PN Arabidopsis thaliana Full-length cDNA Co... 38 7.8
60emb|BX825759.1|CNS0A4ZI Arabidopsis thaliana Full-length cDNA Co... 38 7.8
61gb|AC154447.2| Mus musculus BAC clone RP23-185B14 from chromosom... 38 7.8
62gb|AY085139.1| Arabidopsis thaliana clone 13298 mRNA, complete s... 38 7.8
63gb|AC005763.1|AC005763 Homo sapiens chromosome 19, cosmid R28341... 38 7.8
64gb|M16999.1|CSORSH Campoletis sonorensis virus segment H repeat ... 38 7.8 
>gb|AY846828.1| Triticum aestivum ribosomal protein L7 mRNA, complete cds
          Length = 787

 Score =  268 bits (135), Expect = 5e-69
 Identities = 155/162 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctacgcccgcgcccagcagtacgccggggagtatgaggcccaggacaaagagctggtgc 60
           |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 181 tctacgcccgcgcggagcagtacgccggggagtatgaggcccaggacaaggagctggtgc 240

                                                                       
Query: 61  aacttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 aacttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagccgc 300

                                                     
Query: 121 tgtttgttgtccgnatccgtggtatcaatgctatgcacccaa 162
           ||||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 301 tgtttgtcgtccgtatccgtggtatcaatgcaatgcacccaa 342
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>ref|XM_473801.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 753

 Score =  204 bits (103), Expect = 6e-50
 Identities = 141/154 (91%)
 Strand = Plus / Plus

                                                                       
Query: 7   cccgcgcccagcagtacgccggggagtatgaggcccaggacaaagagctggtgcaactta 66
           |||||||| |||||||||||| |||||| ||||||||||| || ||||||||||||||||
Sbjct: 143 cccgcgccaagcagtacgccgaggagtacgaggcccaggagaaggagctggtgcaactta 202

                                                                       
Query: 67  agcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagctgctgtttg 126
           |||||||||| |||||||||||||| ||||||||||| ||||||| |||| |||||||||
Sbjct: 203 agcgtgaggctcggatgaagggtggtttctatgtcagccctgaggaaaagttgctgtttg 262

                                             
Query: 127 ttgtccgnatccgtggtatcaatgctatgcaccc 160
           | ||||| ||||||||||||||||| ||||||||
Sbjct: 263 tggtccgtatccgtggtatcaatgccatgcaccc 296
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>dbj|AK073472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G24, full
           insert sequence
          Length = 1040

 Score =  204 bits (103), Expect = 6e-50
 Identities = 141/154 (91%)
 Strand = Plus / Plus

                                                                       
Query: 7   cccgcgcccagcagtacgccggggagtatgaggcccaggacaaagagctggtgcaactta 66
           |||||||| |||||||||||| |||||| ||||||||||| || ||||||||||||||||
Sbjct: 258 cccgcgccaagcagtacgccgaggagtacgaggcccaggagaaggagctggtgcaactta 317

                                                                       
Query: 67  agcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagctgctgtttg 126
           |||||||||| |||||||||||||| ||||||||||| ||||||| |||| |||||||||
Sbjct: 318 agcgtgaggctcggatgaagggtggtttctatgtcagccctgaggaaaagttgctgtttg 377

                                             
Query: 127 ttgtccgnatccgtggtatcaatgctatgcaccc 160
           | ||||| ||||||||||||||||| ||||||||
Sbjct: 378 tggtccgtatccgtggtatcaatgccatgcaccc 411
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>gb|AY109992.1| Zea mays CL9168_1 mRNA sequence
          Length = 1226

 Score =  188 bits (95), Expect = 3e-45
 Identities = 139/154 (90%)
 Strand = Plus / Minus

                                                                        
Query: 7    cccgcgcccagcagtacgccggggagtatgaggcccaggacaaagagctggtgcaactta 66
            |||||||| |||||||||||| |||||| || |||||||| || || |||||||| ||||
Sbjct: 1048 cccgcgccaagcagtacgccgaggagtacgatgcccaggagaaggaactggtgcagctta 989

                                                                        
Query: 67   agcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagctgctgtttg 126
            |||||||||||||  |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 988  agcgtgaggcccgtttgaagggtggtttctatgtcagtcctgaggcaaagctgctctttg 929

                                              
Query: 127  ttgtccgnatccgtggtatcaatgctatgcaccc 160
            | ||||| ||||||||||||||||| ||||||||
Sbjct: 928  tggtccgcatccgtggtatcaatgccatgcaccc 895
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>gb|BT016468.1| Zea mays clone Contig301 mRNA sequence
          Length = 1198

 Score =  172 bits (87), Expect = 2e-40
 Identities = 137/154 (88%)
 Strand = Plus / Plus

                                                                       
Query: 7   cccgcgcccagcagtacgccggggagtatgaggcccaggacaaagagctggtgcaactta 66
           |||||||| |||||||||||| |||||| || |||||||| || || ||||| || ||||
Sbjct: 190 cccgcgccaagcagtacgccgaggagtacgatgcccaggagaaggaactggtacagctta 249

                                                                       
Query: 67  agcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagctgctgtttg 126
           |||||||||||||  |||||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 250 agcgtgaggcccgtttgaagggtggtttctatgtcagccctgaggcaaagctgctatttg 309

                                             
Query: 127 ttgtccgnatccgtggtatcaatgctatgcaccc 160
           | ||||| ||||||||||||||||| ||||||||
Sbjct: 310 tggtccgcatccgtggtatcaatgccatgcaccc 343
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>gb|AY104655.1| Zea mays PCO101521 mRNA sequence
          Length = 1155

 Score =  167 bits (84), Expect = 1e-38
 Identities = 134/151 (88%)
 Strand = Plus / Plus

                                                                       
Query: 7   cccgcgcccagcagtacgccggggagtatgaggcccaggacaaagagctggtgcaactta 66
           |||||||| |||||||||||| |||||| || |||||||| || || ||||| || ||||
Sbjct: 203 cccgcgccaagcagtacgccgaggagtacgatgcccaggagaaggaactggtacagctta 262

                                                                       
Query: 67  agcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagctgctgtttg 126
           |||||||||||||  |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 263 agcgtgaggcccgtttgaagggtggtttctatgtcagtcctgaggcaaagctgctatttg 322

                                          
Query: 127 ttgtccgnatccgtggtatcaatgctatgca 157
           |  |||| ||||||||||||||||| |||||
Sbjct: 323 tgatccgcatccgtggtatcaatgccatgca 353
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>ref|XM_480842.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1084

 Score =  153 bits (77), Expect = 2e-34
 Identities = 136/156 (87%)
 Strand = Plus / Plus

                                                                       
Query: 5   cgcccgcgcccagcagtacgccggggagtatgaggcccaggacaaagagctggtgcaact 64
           |||||||||| |||||||||||  |||||| || || ||||| || ||||| ||||| ||
Sbjct: 199 cgcccgcgccaagcagtacgcccaggagtacgacgcgcaggagaaggagcttgtgcagct 258

                                                                       
Query: 65  taagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagctgctgtt 124
            ||||||||||| |||||||||||||||||||| ||||| |||||||| || || |||||
Sbjct: 259 caagcgtgaggctcggatgaagggtgggttctacgtcagccctgaggccaaacttctgtt 318

                                               
Query: 125 tgttgtccgnatccgtggtatcaatgctatgcaccc 160
           ||| ||||| ||||||||||||||||| ||||||||
Sbjct: 319 tgtggtccgcatccgtggtatcaatgccatgcaccc 354
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>dbj|AK102873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112B19, full
           insert sequence
          Length = 1084

 Score =  153 bits (77), Expect = 2e-34
 Identities = 136/156 (87%)
 Strand = Plus / Plus

                                                                       
Query: 5   cgcccgcgcccagcagtacgccggggagtatgaggcccaggacaaagagctggtgcaact 64
           |||||||||| |||||||||||  |||||| || || ||||| || ||||| ||||| ||
Sbjct: 199 cgcccgcgccaagcagtacgcccaggagtacgacgcgcaggagaaggagcttgtgcagct 258

                                                                       
Query: 65  taagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagctgctgtt 124
            ||||||||||| |||||||||||||||||||| ||||| |||||||| || || |||||
Sbjct: 259 caagcgtgaggctcggatgaagggtgggttctacgtcagccctgaggccaaacttctgtt 318

                                               
Query: 125 tgttgtccgnatccgtggtatcaatgctatgcaccc 160
           ||| ||||| ||||||||||||||||| ||||||||
Sbjct: 319 tgtggtccgcatccgtggtatcaatgccatgcaccc 354
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>gb|AY103677.1| Zea mays PCO099976 mRNA sequence
          Length = 1103

 Score =  153 bits (77), Expect = 2e-34
 Identities = 136/156 (87%)
 Strand = Plus / Plus

                                                                       
Query: 5   cgcccgcgcccagcagtacgccggggagtatgaggcccaggacaaagagctggtgcaact 64
           |||||||||| |||||||||||| ||||||  | |||||||| || ||||| ||||| ||
Sbjct: 254 cgcccgcgccaagcagtacgccgaggagtaccacgcccaggagaaggagcttgtgcagct 313

                                                                       
Query: 65  taagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagctgctgtt 124
            ||||||||||||||| ||||||||||||||||||| || || ||||| ||||| |||||
Sbjct: 314 caagcgtgaggcccggttgaagggtgggttctatgtgagcccagaggccaagcttctgtt 373

                                               
Query: 125 tgttgtccgnatccgtggtatcaatgctatgcaccc 160
           ||| || || ||||||||||||||||| ||||||||
Sbjct: 374 tgtggttcgcatccgtggtatcaatgccatgcaccc 409
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>gb|BT017565.1| Zea mays clone EL01N0425H11.c mRNA sequence
          Length = 922

 Score =  141 bits (71), Expect = 7e-31
 Identities = 133/154 (86%)
 Strand = Plus / Plus

                                                                       
Query: 7   cccgcgcccagcagtacgccggggagtatgaggcccaggacaaagagctggtgcaactta 66
           |||||||  |||||||||||| ||| || || |||||||| || || |||||||| ||||
Sbjct: 138 cccgcgcaaagcagtacgccgaggaatacgatgcccaggagaaggaactggtgcagctta 197

                                                                       
Query: 67  agcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggcaaagctgctgtttg 126
           |||| ||||||||  |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 198 agcgcgaggcccgtttgaagggtggtttctatgtcagtcctgaggcaaagctgctctttg 257

                                             
Query: 127 ttgtccgnatccgtggtatcaatgctatgcaccc 160
           | ||||| ||||| ||||| || || ||||||||
Sbjct: 258 tggtccgcatccggggtattaacgccatgcaccc 291
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>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
              complete sequence
          Length = 129037

 Score =  131 bits (66), Expect = 7e-28
 Identities = 92/101 (91%)
 Strand = Plus / Plus

                                                                          
Query: 42     caggacaaagagctggtgcaacttaagcgtgaggcccggatgaagggtgggttctatgtc 101
              ||||| || |||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 110622 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 110681

                                                       
Query: 102    agtcctgaggcaaagctgctgtttgttgtccgnatccgtgg 142
              || ||||||| |||| |||||||||| ||||| ||||||||
Sbjct: 110682 agccctgaggaaaagttgctgtttgtggtccgtatccgtgg 110722



 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 7      cccgcgcccagcagtacgccggggagtatgaggcccagg 45
              |||||||| |||||||||||| |||||| ||||||||||
Sbjct: 109991 cccgcgccaagcagtacgccgaggagtacgaggcccagg 110029
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>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09,
             complete sequence
          Length = 152732

 Score =  131 bits (66), Expect = 7e-28
 Identities = 92/101 (91%)
 Strand = Plus / Plus

                                                                         
Query: 42    caggacaaagagctggtgcaacttaagcgtgaggcccggatgaagggtgggttctatgtc 101
             ||||| || |||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 38645 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 38704

                                                      
Query: 102   agtcctgaggcaaagctgctgtttgttgtccgnatccgtgg 142
             || ||||||| |||| |||||||||| ||||| ||||||||
Sbjct: 38705 agccctgaggaaaagttgctgtttgtggtccgtatccgtgg 38745



 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 7     cccgcgcccagcagtacgccggggagtatgaggcccagg 45
             |||||||| |||||||||||| |||||| ||||||||||
Sbjct: 38014 cccgcgccaagcagtacgccgaggagtacgaggcccagg 38052
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  131 bits (66), Expect = 7e-28
 Identities = 92/101 (91%)
 Strand = Plus / Plus

                                                                            
Query: 42       caggacaaagagctggtgcaacttaagcgtgaggcccggatgaagggtgggttctatgtc 101
                ||||| || |||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 30634914 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 30634973

                                                         
Query: 102      agtcctgaggcaaagctgctgtttgttgtccgnatccgtgg 142
                || ||||||| |||| |||||||||| ||||| ||||||||
Sbjct: 30634974 agccctgaggaaaagttgctgtttgtggtccgtatccgtgg 30635014



 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 7        cccgcgcccagcagtacgccggggagtatgaggcccagg 45
                |||||||| |||||||||||| |||||| ||||||||||
Sbjct: 30634283 cccgcgccaagcagtacgccgaggagtacgaggcccagg 30634321
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                           
Query: 42      caggacaaagagctggtgcaacttaagcgtgaggcccggatgaagggtgggttctatgtc 101
               ||||| || ||||| ||||| || ||||||||||| |||||||||||||||||||| |||
Sbjct: 8147868 caggagaaggagcttgtgcagctcaagcgtgaggctcggatgaagggtgggttctacgtc 8147927

                                                        
Query: 102     agtcctgaggcaaagctgctgtttgttgtccgnatccgtgg 142
               || |||||||| || || |||||||| ||||| ||||||||
Sbjct: 8147928 agccctgaggccaaacttctgtttgtggtccgcatccgtgg 8147968
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>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1047A05
          Length = 157517

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                          
Query: 42     caggacaaagagctggtgcaacttaagcgtgaggcccggatgaagggtgggttctatgtc 101
              ||||| || ||||| ||||| || ||||||||||| |||||||||||||||||||| |||
Sbjct: 116179 caggagaaggagcttgtgcagctcaagcgtgaggctcggatgaagggtgggttctacgtc 116238

                                                       
Query: 102    agtcctgaggcaaagctgctgtttgttgtccgnatccgtgg 142
              || |||||||| || || |||||||| ||||| ||||||||
Sbjct: 116239 agccctgaggccaaacttctgtttgtggtccgcatccgtgg 116279
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>ref|NM_020877.2| Homo sapiens dynein heavy chain domain 3 (DNHD3), mRNA
          Length = 13505

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 43  aggacaaagagctggtgcaac 63
           |||||||||||||||||||||
Sbjct: 724 aggacaaagagctggtgcaac 744
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>gb|AC087388.9| Homo sapiens chromosome 17, clone RP11-199F11, complete sequence
          Length = 121017

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    aggacaaagagctggtgcaac 63
             |||||||||||||||||||||
Sbjct: 20846 aggacaaagagctggtgcaac 20826
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>dbj|AB040936.2| Homo sapiens mRNA for KIAA1503 protein, partial cds
          Length = 14955

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 43   aggacaaagagctggtgcaac 63
            |||||||||||||||||||||
Sbjct: 2170 aggacaaagagctggtgcaac 2190
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>gb|AY130402.1| Branchiostoma lanceolatum ribosomal protein L7 mRNA, partial cds
          Length = 718

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 123 tttgttgtccgnatccgtggtatcaatg 150
           ||||||||| | ||||||||||||||||
Sbjct: 247 tttgttgtcaggatccgtggtatcaatg 274
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>gb|AC025335.25| Homo sapiens chromosome 17, clone RP11-404G1, complete sequence
          Length = 118684

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    aggacaaagagctggtgcaac 63
             |||||||||||||||||||||
Sbjct: 14633 aggacaaagagctggtgcaac 14653
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>gb|BC034225.1| Homo sapiens dynein heavy chain domain 3, mRNA (cDNA clone
           IMAGE:4839091), complete cds
          Length = 3021

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 43  aggacaaagagctggtgcaac 63
           |||||||||||||||||||||
Sbjct: 795 aggacaaagagctggtgcaac 815
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>gb|AC139213.11| Mus musculus chromosome 7, clone RP23-341H2, complete sequence
          Length = 189709

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     tgtcagtcctgaggcaaagc 117
              ||||||||||||||||||||
Sbjct: 166340 tgtcagtcctgaggcaaagc 166359
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>emb|AL161916.8| Human DNA sequence from clone RP4-636O23 on chromosome 1p31.3-32.2
             Contains the 3' end of gene MGC35130, complete sequence
          Length = 99249

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    caggacaaagagctggtgca 61
             ||||||||||||||||||||
Sbjct: 13649 caggacaaagagctggtgca 13630
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>emb|BX068796.1|CNS09P8W Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC53AH02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 878

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 122 gtttgttgtccgnatccgtggtatcaa 148
           ||||||| |||| ||||||||||||||
Sbjct: 269 gtttgttatccgtatccgtggtatcaa 295
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>emb|BX059760.1|CNS09I9W Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC4DC05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 827

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 122 gtttgttgtccgnatccgtggtatcaa 148
           ||||||| |||| ||||||||||||||
Sbjct: 346 gtttgttatccgtatccgtggtatcaa 372
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>emb|BX049726.1|CNS09AJ6 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC25DC02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 696

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 122 gtttgttgtccgnatccgtggtatcaa 148
           ||||||| |||| ||||||||||||||
Sbjct: 220 gtttgttatccgtatccgtggtatcaa 246
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>emb|BX049091.1|CNS09A1J Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC24DB07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 553

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 122 gtttgttgtccgnatccgtggtatcaa 148
           ||||||| |||| ||||||||||||||
Sbjct: 233 gtttgttatccgtatccgtggtatcaa 259
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>emb|BX010349.1|CNS08G5D Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA16CF09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 671

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 122 gtttgttgtccgnatccgtggtatcaa 148
           ||||||| |||| ||||||||||||||
Sbjct: 147 gtttgttatccgtatccgtggtatcaa 173
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 2       ctacgcccgcgcccagcagt 21
               ||||||||||||||||||||
Sbjct: 2937506 ctacgcccgcgcccagcagt 2937487
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>emb|AL844208.5| Mouse DNA sequence from clone RP23-354D14 on chromosome 4, complete
              sequence
          Length = 206842

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aggcaaagctgctgtttgtt 128
              ||||||||||||||||||||
Sbjct: 150459 aggcaaagctgctgtttgtt 150440
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>ref|NM_126186.2| Arabidopsis thaliana structural constituent of ribosome /
           transcription regulator AT2G01250 mRNA, complete cds
          Length = 1051

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 336 tccgtatccgtggtatcaatgc 357
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>ref|NM_202576.1| Arabidopsis thaliana structural constituent of ribosome /
           transcription regulator AT3G13580 transcript variant
           AT3G13580.3 mRNA, complete cds
          Length = 1569

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 904 tccgtatccgtggtatcaatgc 925
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>ref|NM_202575.1| Arabidopsis thaliana structural constituent of ribosome /
           transcription regulator AT3G13580 transcript variant
           AT3G13580.2 mRNA, complete cds
          Length = 1225

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 560 tccgtatccgtggtatcaatgc 581
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>ref|NM_112204.2| Arabidopsis thaliana structural constituent of ribosome /
           transcription regulator AT3G13580 transcript variant
           AT3G13580.1 mRNA, complete cds
          Length = 995

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 330 tccgtatccgtggtatcaatgc 351
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>gb|AC157211.7| Mus musculus chromosome 1, clone RP23-204C6, complete sequence
          Length = 206840

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 99   gtcagtcctgaggcaaagctgct 121
            ||||||| |||||||||||||||
Sbjct: 7455 gtcagtcgtgaggcaaagctgct 7477
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>gb|AC147480.13| Mus musculus chromosome 14, clone RP23-429N24, complete sequence
          Length = 210000

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 92     gttctatgtcagtcctgag 110
              |||||||||||||||||||
Sbjct: 182059 gttctatgtcagtcctgag 182041
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>ref|XM_593300.2| PREDICTED: Bos taurus similar to WD repeat domain 76 (LOC515302),
            mRNA
          Length = 2622

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 144  atcaatgctatgcacccaa 162
            |||||||||||||||||||
Sbjct: 1273 atcaatgctatgcacccaa 1291
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>ref|XM_426275.1| PREDICTED: Gallus gallus similar to Gab3 protein; DOS/Gab family
           member 3 (LOC428717), mRNA
          Length = 2973

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 109 aggcaaagctgctgtttgt 127
           |||||||||||||||||||
Sbjct: 933 aggcaaagctgctgtttgt 951
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>gb|AC102771.13| Mus musculus chromosome 1, clone RP23-175K23, complete sequence
          Length = 226416

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 99    gtcagtcctgaggcaaagctgct 121
             ||||||| |||||||||||||||
Sbjct: 33747 gtcagtcgtgaggcaaagctgct 33725
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>gb|AC165092.3| Mus musculus BAC clone RP23-10M2 from chromosome 14, complete sequence
          Length = 215949

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 92     gttctatgtcagtcctgag 110
              |||||||||||||||||||
Sbjct: 195489 gttctatgtcagtcctgag 195471
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>ref|XM_544653.2| PREDICTED: Canis familiaris similar to WD repeat domain 76
            (LOC487529), mRNA
          Length = 1896

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 144  atcaatgctatgcacccaa 162
            |||||||||||||||||||
Sbjct: 1819 atcaatgctatgcacccaa 1837
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>ref|XM_754632.1| Ustilago maydis 521 hypothetical protein (UM03578.1) partial mRNA
          Length = 942

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                     
Query: 123 tttgttgtccgnatccgtggtatcaa 148
           |||||||||||  |||||||||||||
Sbjct: 463 tttgttgtccgtctccgtggtatcaa 488
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>gb|AC122233.4| Mus musculus BAC clone RP23-137D14 from 16, complete sequence
          Length = 203964

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 81     atgaagggtgggttctatg 99
              |||||||||||||||||||
Sbjct: 197251 atgaagggtgggttctatg 197269
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>gb|AF362512.1| Campoletis sonorensis ichnovirus segment H, complete sequence
          Length = 8315

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 49   aagagctggtgcaacttaa 67
            |||||||||||||||||||
Sbjct: 6737 aagagctggtgcaacttaa 6719
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>gb|AY079328.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250)
           mRNA, complete cds
          Length = 760

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 260 tccgtatccgtggtatcaatgc 281
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>gb|AY045994.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250)
           mRNA, complete cds
          Length = 960

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 309 tccgtatccgtggtatcaatgc 330
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>gb|AC165146.3| Mus musculus BAC clone RP24-378G3 from chromosome 14, complete sequence
          Length = 153934

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 92     gttctatgtcagtcctgag 110
              |||||||||||||||||||
Sbjct: 111223 gttctatgtcagtcctgag 111241
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>emb|AL662930.29| Mouse DNA sequence from clone RP23-212B18 on chromosome 11 Contains
            part of the gene for a novel protein (likely ortholog to
            homo sapiens FLJ38335), complete sequence
          Length = 198148

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 104  tcctgaggcaaagctgctg 122
            |||||||||||||||||||
Sbjct: 3655 tcctgaggcaaagctgctg 3637
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 22      acgccggggagtatgaggc 40
               |||||||||||||||||||
Sbjct: 1023553 acgccggggagtatgaggc 1023535
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>gb|AY081698.1| Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250) mRNA,
           complete cds
          Length = 751

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 260 tccgtatccgtggtatcaatgc 281
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>gb|AY077675.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds
          Length = 735

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 266 tccgtatccgtggtatcaatgc 287
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 71      tgaggcccggatgaagggt 89
               |||||||||||||||||||
Sbjct: 2648356 tgaggcccggatgaagggt 2648338
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>gb|AC161250.2| Mus musculus BAC clone RP24-553E23 from chromosome 9, complete sequence
          Length = 189036

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 107    tgaggcaaagctgctgttt 125
              |||||||||||||||||||
Sbjct: 108883 tgaggcaaagctgctgttt 108901
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>gb|AY056112.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds
          Length = 971

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 330 tccgtatccgtggtatcaatgc 351
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>gb|AY039900.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds
          Length = 966

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 330 tccgtatccgtggtatcaatgc 351
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>gb|AF370484.1|AF370484 Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250; F10A8.13)
           mRNA, complete cds
          Length = 915

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 307 tccgtatccgtggtatcaatgc 328
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>emb|BX818796.1|CNS0A9X8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB14ZB01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 889

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 295 tccgtatccgtggtatcaatgc 316
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>emb|BX822214.1|CNS0A5Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB1ZG01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 943

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 312 tccgtatccgtggtatcaatgc 333
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>emb|BX824301.1|CNS0A5PN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH38ZB04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1136

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 556 tccgtatccgtggtatcaatgc 577
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>emb|BX825759.1|CNS0A4ZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL60ZF08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 895

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 300 tccgtatccgtggtatcaatgc 321
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>gb|AC154447.2| Mus musculus BAC clone RP23-185B14 from chromosome 16, complete
             sequence
          Length = 212505

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 81    atgaagggtgggttctatg 99
             |||||||||||||||||||
Sbjct: 73628 atgaagggtgggttctatg 73646
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>gb|AY085139.1| Arabidopsis thaliana clone 13298 mRNA, complete sequence
          Length = 996

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 130 tccgnatccgtggtatcaatgc 151
           |||| |||||||||||||||||
Sbjct: 336 tccgtatccgtggtatcaatgc 357
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>gb|AC005763.1|AC005763 Homo sapiens chromosome 19, cosmid R28341, complete sequence
          Length = 35587

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 111   gcaaagctgctgtttgttgtccg 133
             ||||||||||||||| |||||||
Sbjct: 11911 gcaaagctgctgtttattgtccg 11889
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>gb|M16999.1|CSORSH Campoletis sonorensis virus segment H repeat elements
          Length = 2746

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 49   aagagctggtgcaacttaa 67
            |||||||||||||||||||
Sbjct: 1230 aagagctggtgcaacttaa 1248


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,020,820
Number of Sequences: 3902068
Number of extensions: 1020820
Number of successful extensions: 66496
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66279
Number of HSP's gapped (non-prelim): 217
length of query: 162
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 140
effective length of database: 17,147,199,772
effective search space: 2400607968080
effective search space used: 2400607968080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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