ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25p18 |
|---|---|
| Clone Library Name | barley_pub |
>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein homolog) Length = 247 Score = 40.0 bits (92), Expect = 0.005 Identities = 23/46 (50%), Positives = 29/46 (63%) Frame = +2 Query: 131 ESRATVERPRLNLKPRSNTVGQSGESAAKERPSLFGGARPREQVLR 268 E RA +RPRL LKPR TV A ++FGGARPRE+V++ Sbjct: 202 EERA--QRPRLQLKPR--TVATPLNQVANPNSAIFGGARPREEVVQ 243
>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein) Length = 247 Score = 40.0 bits (92), Expect = 0.005 Identities = 23/46 (50%), Positives = 29/46 (63%) Frame = +2 Query: 131 ESRATVERPRLNLKPRSNTVGQSGESAAKERPSLFGGARPREQVLR 268 E RA +RPRL LKPR TV A ++FGGARPRE+V++ Sbjct: 202 EERA--QRPRLQLKPR--TVATPLNQVANPNSAIFGGARPREEVVQ 243
>IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 40.0 bits (92), Expect = 0.005 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Frame = +2 Query: 131 ESRATVERPRLNLKPRS---NTVGQSGESAAKERPSLFGGARPREQVLRDRGVD 283 + R +RPRLNLKPRS + S + S+FGGA+P + R+R V+ Sbjct: 324 DDRGPPQRPRLNLKPRSAPKEDDASASTSQSSRAASIFGGAKPVDTAAREREVE 377
>IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 38.9 bits (89), Expect = 0.011 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Frame = +2 Query: 131 ESRATVERPRLNLKPRSNTV---GQSGESAAKERPSLFGGARPREQVLRDRGVD 283 + R +RP+LNLKPRS + S + S+FGGA+P + R+R V+ Sbjct: 324 DDRGPPQRPKLNLKPRSTPEEDDSSASTSQSTRAASIFGGAKPVDTAAREREVE 377
>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3| Length = 388 Score = 38.5 bits (88), Expect = 0.015 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 16/104 (15%) Frame = +2 Query: 137 RATVERPRLNLKPRSN-------TVGQSGESAAKERPSLFGGARPREQVLRDRGVDALAS 295 R + ERPRLNLKPRS+ T + +++K + FGGA+P Sbjct: 236 RESSERPRLNLKPRSSSNVNTEATPSATTTTSSKPKRDPFGGAKP--------------- 280 Query: 296 DLENTSPVGRSKNEFAKVEQ---------KVEAMTTNPSGEKAE 400 ++NTS + R + + AK Q + + + PS +KAE Sbjct: 281 -VDNTSVLQRVEEKLAKRTQSFRREDNANRERSTSRKPSADKAE 323
>PDXA_RHILO (Q984S6) 4-hydroxythreonine-4-phosphate dehydrogenase (EC| 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase) Length = 342 Score = 38.1 bits (87), Expect = 0.019 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%) Frame = +2 Query: 35 VPVIASVMQVEVVHEVRQNVIVAKMGVAGADAESRATVERPRLNLKPRSNTVGQSGESAA 214 VPV + EV + +IVA + AD R + RPRL + + G+ G Sbjct: 169 VPVTIHIALAEVPKALTTELIVATARITAADLAGRFGIARPRLAIAGLNPHAGEGGSLGL 228 Query: 215 KERPSLFGGARPREQVLRDRGVDA---LASD 298 ++ + RP +LR G+DA LA+D Sbjct: 229 EDEHIV----RPAVDILRAEGIDAFGPLAAD 255
>PDXA2_BRAJA (Q89MT9) 4-hydroxythreonine-4-phosphate dehydrogenase 2 (EC| 1.1.1.262) (4-(phosphohydroxy)-L-threonine dehydrogenase 2) Length = 345 Score = 33.9 bits (76), Expect = 0.36 Identities = 20/84 (23%), Positives = 41/84 (48%) Frame = +2 Query: 35 VPVIASVMQVEVVHEVRQNVIVAKMGVAGADAESRATVERPRLNLKPRSNTVGQSGESAA 214 VPV V + + ++ +IV+ + + + +SR + RPR+ + + G+ G Sbjct: 177 VPVTIHVSLRDALSQLTSELIVSTVRIVATELKSRFGIARPRIAVSGLNPHAGEDGSLGH 236 Query: 215 KERPSLFGGARPREQVLRDRGVDA 286 +E+ + P + LR+ G+DA Sbjct: 237 EEQTII----APALKTLRNDGIDA 256
>ZN488_HUMAN (Q96MN9) Zinc finger protein 488| Length = 340 Score = 33.1 bits (74), Expect = 0.62 Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 7/130 (5%) Frame = +2 Query: 101 AKMGVAGADAESRATV-------ERPRLNLKPRSNTVGQSGESAAKERPSLFGGARPREQ 259 A +G AG D S RP L P+ T G+ +SA E P + Sbjct: 60 AAVGRAGRDVGSAELALLVAPGKPRPGKPLPPK--TRGEQRQSAFTELPRM--------- 108 Query: 260 VLRDRGVDALASDLENTSPVGRSKNEFAKVEQKVEAMTTNPSGEKAESFPVGHRGPRNAD 439 +DR VDA A + E+ P G+ Q + + P+G K F V G R+ Sbjct: 109 --KDRQVDAQAQEREHDDPTGQ-----PGAPQLTQNIPRGPAGSKV--FSVWPSGARSEQ 159 Query: 440 RKDYRRDTDR 469 R + + T R Sbjct: 160 RSAFSKPTKR 169
>PSMA_METMP (Q6M0L9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 259 Score = 32.7 bits (73), Expect = 0.81 Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 8/117 (6%) Frame = +2 Query: 44 IASVMQVEVVHEVRQNVIVAKMGVAGADAESRATVERPRLNLKPRSNTVGQSGESAA--- 214 + V +E + ++ +++ A G+ A++R ++R R+ + + G++ A Sbjct: 60 LIDVSSIEKIFQIDDHIVAATSGLV---ADARVLIDRARIEAQMNRVSYGEAITVEALAK 116 Query: 215 -----KERPSLFGGARPREQVLRDRGVDALASDLENTSPVGRSKNEFAKVEQKVEAM 370 K+ + GGARP L G+D ++ L T P G A +E K A+ Sbjct: 117 KICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSG------ALIEYKATAI 167
>BYST_MOUSE (O54825) Bystin| Length = 303 Score = 32.7 bits (73), Expect = 0.81 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -2 Query: 367 SFNLLLDLCKLIF*PANW-RGVLKVTCQSIHTTISENLFPGPSTTKEGWPLLRSTFTRL 194 +F+L + L K +F P W +G+L C+S T+ E + G TK P+L S+ L Sbjct: 135 NFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIITKCSIPVLHSSAAML 193
>BYST_HUMAN (Q13895) Bystin| Length = 303 Score = 32.7 bits (73), Expect = 0.81 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -2 Query: 367 SFNLLLDLCKLIF*PANW-RGVLKVTCQSIHTTISENLFPGPSTTKEGWPLLRSTFTRL 194 +F+L + L K +F P W +G+L C+S T+ E + G TK P+L S+ L Sbjct: 135 NFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIITKCSIPVLHSSAAML 193
>PPHLN_MOUSE (Q8K2H1) Periphilin-1| Length = 381 Score = 32.7 bits (73), Expect = 0.81 Identities = 21/104 (20%), Positives = 36/104 (34%) Frame = +2 Query: 266 RDRGVDALASDLENTSPVGRSKNEFAKVEQKVEAMTTNPSGEKAESFPVGHRGPRNADRK 445 RDR + SPVGR + ++ V + + +P + SF + Sbjct: 132 RDRSPHKRDAPFFRESPVGRKDSPHSRSGSSVSSRSYSPERSRTHSFHQSQHRKSSRVGA 191 Query: 446 DYRRDTDRVDGYRPTRREENRKVARDVEKXXXXXXXXXXTWRKP 577 Y+R + + G R ++ K +RD KP Sbjct: 192 SYKRQNEAIRGRGKERSIQSVKTSRDASPSSSSAVASSKALDKP 235
>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 246 Score = 32.3 bits (72), Expect = 1.1 Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 10/114 (8%) Frame = +2 Query: 11 VEEKQVLPVP--VIASVMQVEVVHEVRQNVIVAKMGVAGADAESRATVERPRLNLKPRSN 184 VEE VL V V + +++ E + +V Q AG A++R VER R+ + Sbjct: 44 VEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRY 103 Query: 185 TVGQSGESAA--------KERPSLFGGARPREQVLRDRGVDALASDLENTSPVG 322 T G+ + K+ + GG RP L GVD L T P G Sbjct: 104 TYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTKGCRLFETDPSG 157
>NFM_RABIT (P54938) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) (Fragment) Length = 644 Score = 32.0 bits (71), Expect = 1.4 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 4/96 (4%) Frame = +2 Query: 125 DAESRATVERPRLNLKPRSNTVGQSGESAAKERP---SLFGGARPREQVLRDRGVDALAS 295 + E+ A E K T +S E AAKE P + G + + V+ + Sbjct: 354 EGETEAEGEVEEAEAKEEKKTEEKSEEVAAKEEPVTEAKVGKPEKAKSPVPKSPVEEVKP 413 Query: 296 DLENTSPVGRSKNEFAKV-EQKVEAMTTNPSGEKAE 400 E T+ G K E KV E+K +A +P EK E Sbjct: 414 KAEATAGKGEQKEEEEKVEEEKKKAAKESPKEEKVE 449
>FTSZ_CORGL (P94337) Cell division protein ftsZ| Length = 442 Score = 31.6 bits (70), Expect = 1.8 Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 1/146 (0%) Frame = +2 Query: 41 VIASVMQVEVVHEVRQNVIVAKMGVAGADA-ESRATVERPRLNLKPRSNTVGQSGESAAK 217 + +++ + EVR VI A A A E+R +P V + + Sbjct: 290 IFGTIIDDNLGDEVRVTVIATGFDAARASAAENRRAGISAAPAAEPVQQQVPTTNATLPP 349 Query: 218 ERPSLFGGARPREQVLRDRGVDALASDLENTSPVGRSKNEFAKVEQKVEAMTTNPSGEKA 397 E+ S+FGGAR R A E S G + ++ E + + Sbjct: 350 EKESIFGGAREENDPYLSRSAGARHRIEETRSGGGLFTTGNDRDYRRDERREDHRDERRD 409 Query: 398 ESFPVGHRGPRNADRKDYRRDTDRVD 475 E R R+ DR+D RRD R D Sbjct: 410 E-----RRDDRSYDRRDDRRDDRRDD 430
>MURD_PHOLL (Q7N145) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 436 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = +2 Query: 191 GQSGESAAKERPSLFGGARPREQVLRDRGVDALASDLENTSPVGRSKNEFAKVEQKVEAM 370 G+ G+ A+ RP + EQ +RD +A D+ SP S ++F EQ+ Sbjct: 369 GRDGKQLAQLRPEIATLTETMEQAIRDIAPRLVAGDMVLLSPACASLDQFRNFEQRGHEF 428 Query: 371 T 373 T Sbjct: 429 T 429
>Y1894_STRT2 (Q5M2E4) UPF0340 protein stu1894| Length = 187 Score = 31.2 bits (69), Expect = 2.4 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = +2 Query: 95 IVAKMGVAGADAESRATVERPRLNLKPRSNTVGQSGESAAKERPSLFGGAR 247 I+A+ G+ D V+R ++ L+P + +G + +A RP L GGAR Sbjct: 126 ILAQAGIDIGDTSIGMHVKRVQVPLRPIISELGGAHVTALASRPKLIGGAR 176
>Y1894_STRT1 (Q5LXU2) UPF0340 protein str1894| Length = 187 Score = 31.2 bits (69), Expect = 2.4 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = +2 Query: 95 IVAKMGVAGADAESRATVERPRLNLKPRSNTVGQSGESAAKERPSLFGGAR 247 I+A+ G+ D V+R ++ L+P + +G + +A RP L GGAR Sbjct: 126 ILAQAGIDIGDTSIGMHVKRVQVPLRPIISELGGAHVTALASRPKLIGGAR 176
>Y103_STRA5 (Q8E294) UPF0340 protein SAG0103| Length = 189 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +2 Query: 95 IVAKMGVAGADAESRATVERPRLNLKPRSNTVGQSGESAAKERPSLFGGAR 247 IVA G+ D ++R ++ L P S +G + +A RP L GGAR Sbjct: 128 IVAHAGIDIGDTSIGMHIKRVQVPLIPISRELGGAHVTALASRPKLIGGAR 178
>Y102_STRA3 (Q8E7Q2) UPF0340 protein gbs0102| Length = 189 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +2 Query: 95 IVAKMGVAGADAESRATVERPRLNLKPRSNTVGQSGESAAKERPSLFGGAR 247 IVA G+ D ++R ++ L P S +G + +A RP L GGAR Sbjct: 128 IVAHAGIDIGDTSIGMHIKRVQVPLIPISRELGGAHVTALASRPKLIGGAR 178
>REPB_THIFE (P27186) DNA primase (EC 2.7.7.-) (Replication primase)| Length = 352 Score = 30.8 bits (68), Expect = 3.1 Identities = 16/60 (26%), Positives = 30/60 (50%) Frame = +2 Query: 353 QKVEAMTTNPSGEKAESFPVGHRGPRNADRKDYRRDTDRVDGYRPTRREENRKVARDVEK 532 QK E N ++ + P+ AD YR+ ++++G P R++E K A+ +E+ Sbjct: 286 QKDEGRDWNDYAQRTARYAYSAAQPQAADLGKYRQQWEKLEGREPVRQQEQAK-AQKIER 344
>Y489_LACLA (Q9CI77) UPF0340 protein LL0489| Length = 180 Score = 30.8 bits (68), Expect = 3.1 Identities = 21/64 (32%), Positives = 30/64 (46%) Frame = +2 Query: 62 VEVVHEVRQNVIVAKMGVAGADAESRATVERPRLNLKPRSNTVGQSGESAAKERPSLFGG 241 VEV H IVA G+ D V+ ++ ++P +G + +A K RP L GG Sbjct: 121 VEVEH------IVANAGLDIGDTSIGMHVKHVQIPVRPILRELGGAHVTALKSRPKLIGG 174 Query: 242 ARPR 253 R R Sbjct: 175 ERAR 178
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 30.8 bits (68), Expect = 3.1 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Frame = +2 Query: 377 NPSGEKAESFPVGHRGPRNADRKDYRRD---TDRVDGYRPTR-REENRKVARDVEK 532 N ++ S P+ H+G + +D RR+ DRVD R R RE +R+ RD E+ Sbjct: 634 NRERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRER 689
>ARGJ_CHLCH (Q3ASI6) Arginine biosynthesis bifunctional protein argJ [Includes:| Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (Ornithine transacetylase) (OATase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate syn Length = 429 Score = 30.0 bits (66), Expect = 5.3 Identities = 26/92 (28%), Positives = 42/92 (45%) Frame = +2 Query: 47 ASVMQVEVVHEVRQNVIVAKMGVAGADAESRATVERPRLNLKPRSNTVGQSGESAAKERP 226 A+ M+ V + N K G+A A A + A E+ L++KP V +G Sbjct: 96 AASMRAIVCNSGNANAATGKQGMADAQAMADAVAEQ--LSIKPEEVLVASTG-------- 145 Query: 227 SLFGGARPREQVLRDRGVDALASDLENTSPVG 322 + G P E+V G+ AL + L++ S +G Sbjct: 146 -VIGQLLPMERV--HAGIVALPATLQSNSVLG 174
>CSP_PLASI (Q03110) Circumsporozoite protein precursor (CS)| Length = 386 Score = 29.6 bits (65), Expect = 6.9 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 9/109 (8%) Frame = +2 Query: 179 SNTVGQSGESAAKERPSLFGGARPREQVLRDRGVDALASDLENTSPVGRSKNEFA----- 343 S + +G + S G A + R RG+ D E + + + Sbjct: 29 SKAINLNGVNFNNVDASSLGAAHVGQSASRGRGLGENPDDEEGDAKKKKDGKKAEPKNPR 88 Query: 344 --KVEQKVEAMTTNPSGEKAESFPVGHR--GPRNADRKDYRRDTDRVDG 478 K++Q + P+G++A+ P G R G DR D + DR DG Sbjct: 89 ENKLKQPGDRADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRADG 137
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +2 Query: 374 TNPSGEKAESFPVGHRGPRNADRKDYRRDTDRVDG 478 + P GE+ + P G RGPR A K + T DG Sbjct: 834 SGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDG 868
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +2 Query: 374 TNPSGEKAESFPVGHRGPRNADRKDYRRDTDRVDG 478 + P GE+ + P G RGPR A K + T DG Sbjct: 834 SGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDG 868
>RK12_ORYSA (O22386) 50S ribosomal protein L12, chloroplast precursor (CL12)| (Fragment) Length = 158 Score = 29.6 bits (65), Expect = 6.9 Identities = 26/66 (39%), Positives = 34/66 (51%) Frame = -3 Query: 369 IASTFCSTFANSFFDLPTGEVFSRSLAKASTPRSLRTCSRGRAPPKRDGLSFAALSPD*P 190 +AST S+ A S LP+ S + A A+ PRS SR R P+R A+ + D P Sbjct: 1 MASTALSS-AFSLLSLPSSS--SPAAAAAAAPRSFAVPSRAR--PRRAVAVVASTATDSP 55 Query: 189 TVLERG 172 VLE G Sbjct: 56 KVLELG 61
>AKAP1_MOUSE (O08715) A kinase anchor protein 1, mitochondrial precursor| (Protein kinase A-anchoring protein 1) (PRKA1) (Dual-specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein) (S-AKAP) Length = 857 Score = 29.6 bits (65), Expect = 6.9 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = +2 Query: 203 ESAAKERPSLFGGARPREQVLRDRGVDA--LASDLENTSPVGRSKNEFAKVEQKVEAMTT 376 E + ++PS A PR + +R R + L S + S G ++E AKVE + Sbjct: 77 EQRSVDKPSTEPLALPRTRQVRRRSESSGNLPSVADTRSQPGPCRDEIAKVELSL----- 131 Query: 377 NPSGEKAESFPVG 415 G+KA+S P+G Sbjct: 132 --MGDKAKSIPLG 142
>Y3766_BACHD (Q9K6G3) UPF0340 protein BH3766| Length = 188 Score = 29.3 bits (64), Expect = 9.0 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Frame = +2 Query: 14 EEKQVLPVPVIASVMQVEVVHEVRQNVIV----AKMGVAGADAESRATVERPRLNLKPRS 181 EE V+PV M + R VIV A G+ D ++R + ++ Sbjct: 93 EEVAVIPVRKAGGAMATYAFTQFRDPVIVEQIRADAGIDIGDTFIGMHLKRVAVPVRSSI 152 Query: 182 NTVGQSGESAAKERPSLFGGAR 247 + +G + + A RP L GG R Sbjct: 153 SAIGDAHVTMAYSRPKLIGGVR 174
>Y078_SYMTH (Q67TD0) UPF0340 protein STH78| Length = 177 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = +2 Query: 14 EEKQVLPVPVIASVMQVEVVHEVRQNVIVAKMGV-AGADAESRAT---VERPRLNLKPRS 181 E V+PVP + + + V+V ++ AG D + R + ++ ++ Sbjct: 90 ERVTVVPVPRAGGALAARAMRRLPDAVVVEEIKADAGLDIGLTLIGMHLRRVAVPVRLKT 149 Query: 182 NTVGQSGESAAKERPSLFGGAR 247 +G + AA+ RP L GGAR Sbjct: 150 AAIGHARVVAARTRPKLIGGAR 171
>USO1_YEAST (P25386) Intracellular protein transport protein USO1 (Int-1)| Length = 1790 Score = 29.3 bits (64), Expect = 9.0 Identities = 29/149 (19%), Positives = 64/149 (42%), Gaps = 4/149 (2%) Frame = +2 Query: 95 IVAKMGVAGADAESRATVERPRLNLKPRSNTVGQSG----ESAAKERPSLFGGARPREQV 262 I AK G + + ++ + NTV +S E K++ + + +++ Sbjct: 1576 IEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKEL 1635 Query: 263 LRDRGVDALASDLENTSPVGRSKNEFAKVEQKVEAMTTNPSGEKAESFPVGHRGPRNADR 442 L R + L +L++T + E + E + + + EKA + N ++ Sbjct: 1636 LTSR-LKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQ 1694 Query: 443 KDYRRDTDRVDGYRPTRREENRKVARDVE 529 ++RD D V ++R+E K+A++++ Sbjct: 1695 A-WKRDEDTVKKTTDSQRQEIEKLAKELD 1722
>CFDP2_TRAJA (Q588U8) Craniofacial development protein 2 (p97 bucentaur protein)| Length = 574 Score = 29.3 bits (64), Expect = 9.0 Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 6/148 (4%) Frame = +2 Query: 74 HEVRQNVIVAKMGVAGAD-AESRATVERPRLNLKPRSNTVG-----QSGESAAKERPSLF 235 HE + ++ + V G + E ++R ++ PR N G Q E A + Sbjct: 25 HEEAVDELMKEDEVGGEEETEQTKGIKRKAESILPRKNKQGRLSLEQEDEEDANKESGGG 84 Query: 236 GGARPREQVLRDRGVDALASDLENTSPVGRSKNEFAKVEQKVEAMTTNPSGEKAESFPVG 415 G + +++GV++ + + V S A+ E KV T +GE+ E G Sbjct: 85 GSEKEDAATEQEKGVESEDARKKKEDEVLASSVNDAEPESKVPPSTPAKTGEETEETRSG 144 Query: 416 HRGPRNADRKDYRRDTDRVDGYRPTRRE 499 + + ++ + V+ R R++ Sbjct: 145 EEQEKPKEMQEVKLTKSLVEEVRCDRQQ 172
>MUTS_CLOPE (Q8XL87) DNA mismatch repair protein mutS| Length = 909 Score = 29.3 bits (64), Expect = 9.0 Identities = 22/75 (29%), Positives = 34/75 (45%) Frame = +2 Query: 248 PREQVLRDRGVDALASDLENTSPVGRSKNEFAKVEQKVEAMTTNPSGEKAESFPVGHRGP 427 P+E +L D L D+ T+P S+ E+K E + GEK+ S + + Sbjct: 171 PKEIILLDSLDQELIKDITLTTPALISRKPIEYFEEKFEEVLNAQFGEKSNSLSLMVKKS 230 Query: 428 RNADRKDYRRDTDRV 472 NA K Y DT ++ Sbjct: 231 SNALVK-YILDTQKI 244
>RP1_HUMAN (P56715) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1| protein) (Retinitis pigmentosa 1 protein) Length = 2156 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/70 (24%), Positives = 29/70 (41%) Frame = +2 Query: 296 DLENTSPVGRSKNEFAKVEQKVEAMTTNPSGEKAESFPVGHRGPRNADRKDYRRDTDRVD 475 D + S ++ E V+ V+ M T E + + P +D DYR D+D Sbjct: 1543 DSKQNSEKETNEGETKMVKMMVKTMETGSYSESSPDLKKCIKSPVTSDWSDYRPDSDSEQ 1602 Query: 476 GYRPTRREEN 505 Y+ + + N Sbjct: 1603 PYKTSSDDPN 1612
>BMP2K_MOUSE (Q91Z96) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)| Length = 1138 Score = 29.3 bits (64), Expect = 9.0 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Frame = -1 Query: 359 PSARPLQTHFLTCQLE----RCSQGHLPKHPHHDL*ELVPGAEHHQRGMASPSQHFHQ 198 P +P Q H + QL+ R Q HL +HPHH HHQ+ Q Q Sbjct: 423 PPQQPPQQHRVLQQLQQGDWRLQQLHLHRHPHH----------HHQQQQQQQQQQQQQ 470
>YNJ5_CAEEL (P34549) Hypothetical protein R10E11.5| Length = 529 Score = 29.3 bits (64), Expect = 9.0 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 2/101 (1%) Frame = +2 Query: 98 VAKMGVAGADAESRA--TVERPRLNLKPRSNTVGQSGESAAKERPSLFGGARPREQVLRD 271 VAKM A AE T+++ N+K N V + E E+ + + Sbjct: 384 VAKMSGALQKAEEEVVQTIDQTVKNIKSNVNEVKKDVEKNIAEKVDDITKELEKSAKSLE 443 Query: 272 RGVDALASDLENTSPVGRSKNEFAKVEQKVEAMTTNPSGEK 394 D + S ++NTS +S E A ++ + SGEK Sbjct: 444 ETTDKIGSKIDNTSQAIKSNLEEASLKTEKSVNDAVKSGEK 484
>NUAK1_HUMAN (O60285) NUAK family, SNF1-like kinase 1 (EC 2.7.11.1)| (AMPK-related protein kinase 5) Length = 661 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = +2 Query: 101 AKMGVAGADAESRATVERPR-LNLKPRSNTVGQSGESAAKERPSLFGGARPR 253 AKM S +ER R L + N QSG+ A E PS RP+ Sbjct: 347 AKMKGLAKPTTSEVMLERQRSLKKSKKENDFAQSGQDAVPESPSKLSSKRPK 398 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,986,164 Number of Sequences: 219361 Number of extensions: 1899141 Number of successful extensions: 5854 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 5502 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5836 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
