>CAS1_ARATH (P38605) Cycloartenol synthase (EC 5.4.99.8)|
(2,3-epoxysqualene--cycloartenol cyclase)
Length = 759
Score = 168 bits (425), Expect = 1e-41
Identities = 85/163 (52%), Positives = 115/163 (70%), Gaps = 3/163 (1%)
Frame = +1
Query: 145 KTSPFLQKI*LIPFHILGDLIHLLQTIDRS-VECTSSVLQAFILFRELYPGYREEEIGKC 321
++ P+L+ I P GD++ ID VECTS+ +QA I FR+LYPG+R++E+ +C
Sbjct: 536 RSYPWLELI--NPAETFGDIV-----IDYPYVECTSAAIQALISFRKLYPGHRKKEVDEC 588
Query: 322 IKNSSKFIENSQRKDGSWVGTWGVCFTYGTFFAVKGLIASGRTYENSSSIRRACDFLLSK 501
I+ + KFIE+ Q DGSW G+W VCFTYGT+F VKGL+A G+T +NS + +AC+FLLSK
Sbjct: 589 IEKAVKFIESIQAADGSWYGSWAVCFTYGTWFGVKGLVAVGKTLKNSPHVAKACEFLLSK 648
Query: 502 QLSTGGWGETYLSSETESY--VSATSPHAVNTAWAMLALIYAG 624
Q +GGWGE+YLS + + Y + H VNTAWAMLALI AG
Sbjct: 649 QQPSGGWGESYLSCQDKVYSNLDGNRSHVVNTAWAMLALIGAG 691
Score = 42.0 bits (97), Expect = 0.001
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +2
Query: 32 NKDGTFSTYECKRTTSLLEVLNPSESFLNIIVDYP 136
N DG +TYE R+ LE++NP+E+F +I++DYP
Sbjct: 524 NADGGLATYELTRSYPWLELINPAETFGDIVIDYP 558
>ERG7_CANAL (Q04782) Lanosterol synthase (EC 5.4.99.7)|
(Oxidosqualene--lanosterol cyclase)
(2,3-epoxysqualene--lanosterol cyclase) (OSC)
Length = 728
Score = 122 bits (306), Expect(2) = 1e-33
Identities = 57/128 (44%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
Frame = +1
Query: 235 VECTSSVLQAFILFRELYPGYREEEIGKCIKNSSKFIENSQRK-DGSWVGTWGVCFTYGT 411
VECT S + F + YP Y+ E I K I ++ ++I +SQ DGSW G WG+C+TY +
Sbjct: 532 VECTDSSVLGLTYFAKYYPDYKPELIQKTISSAIQYILDSQDNIDGSWYGCWGICYTYAS 591
Query: 412 FFAVKGLIASGRTYENSSSIRRACDFLLSKQLSTGGWGETYLSSETESYVSATSPHAVNT 591
FA++ L G YE+SS++++ CDFL+SKQL GGW E+ ET SYV+ + V +
Sbjct: 592 MFALEALHTVGLDYESSSAVKKGCDFLISKQLPDGGWSESMKGCETHSYVNGENSLVVQS 651
Query: 592 AWAMLALI 615
AWA++ LI
Sbjct: 652 AWALIGLI 659
Score = 40.4 bits (93), Expect(2) = 1e-33
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +2
Query: 41 GTFSTYECKRTTSLLEVLNPSESFLNIIVDYP 136
G+FSTYE + LLE LNP+E F NI+V+YP
Sbjct: 499 GSFSTYEGIKAPLLLEKLNPAEVFNNIMVEYP 530
Score = 36.2 bits (82), Expect = 0.081
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Frame = +1
Query: 307 EIGKCIKNSSKFIENSQRKDGSWVGTWGVCFTYG-----------TFFAVKGLIASGRTY 453
E +K F+ + Q DG W + C T+ + +A+ GLI Y
Sbjct: 606 ESSSAVKKGCDFLISKQLPDGGWSESMKGCETHSYVNGENSLVVQSAWALIGLILGN--Y 663
Query: 454 ENSSSIRRACDFLLSKQLSTGGW 522
+ I+R FL+ +QL TG W
Sbjct: 664 PDEEPIKRGIQFLMKRQLPTGEW 686
>ERG7_HUMAN (P48449) Lanosterol synthase (EC 5.4.99.7)|
(Oxidosqualene--lanosterol cyclase)
(2,3-epoxysqualene--lanosterol cyclase) (OSC)
Length = 732
Score = 129 bits (323), Expect = 9e-30
Identities = 63/151 (41%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Frame = +1
Query: 175 LIPFHILGDLIHLLQTIDRS-VECTSSVLQAFILFRELYPGYREEEIGKCIKNSSKFIEN 351
L P + GD++ ID + VECTS+V+QA F + +P +R EI + + +F
Sbjct: 515 LNPSEVFGDIM-----IDYTYVECTSAVMQALKYFHKRFPEHRAAEIRETLTQGLEFCRR 569
Query: 352 SQRKDGSWVGTWGVCFTYGTFFAVKGLIASGRTYENSSS---IRRACDFLLSKQLSTGGW 522
QR DGSW G+WGVCFTYGT+F ++ G+TY + ++ + RACDFLLS+Q++ GGW
Sbjct: 570 QQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGTACAEVSRACDFLLSRQMADGGW 629
Query: 523 GETYLSSETESYVSATSPHAVNTAWAMLALI 615
GE + S E Y+ + NT WAM+ L+
Sbjct: 630 GEDFESCEERRYLQSAQSQIHNTCWAMMGLM 660
Score = 45.1 bits (105), Expect = 2e-04
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2
Query: 32 NKDGTFSTYECKRTTSLLEVLNPSESFLNIIVDY 133
N DG F+TYE KR LLE+LNPSE F +I++DY
Sbjct: 495 NPDGGFATYETKRGGHLLELLNPSEVFGDIMIDY 528
Score = 32.0 bits (71), Expect = 1.5
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +1
Query: 328 NSSKFIENSQRKDGSWVGTWGVCFTYGTFFAVKGLIAS---GRTYENSSSIRRACDFLLS 498
N F Q +DG W G +G G F + GL+ + R + +L S
Sbjct: 79 NGMTFYVGLQAEDGHWTGDYG-----GPLFLLPGLLITCHVARIPLPAGYREEIVRYLRS 133
Query: 499 KQLSTGGWGETYLSSETESYVSATSPHAVN 588
QL GGWG L E +S V T+ + V+
Sbjct: 134 VQLPDGGWG---LHIEDKSTVFGTALNYVS 160
>ERG7_MOUSE (Q8BLN5) Lanosterol synthase (EC 5.4.99.7)|
(Oxidosqualene--lanosterol cyclase)
(2,3-epoxysqualene--lanosterol cyclase) (OSC)
Length = 733
Score = 126 bits (317), Expect = 5e-29
Identities = 64/162 (39%), Positives = 97/162 (59%), Gaps = 4/162 (2%)
Frame = +1
Query: 142 KKTSPFLQKI*LIPFHILGDLIHLLQTIDRS-VECTSSVLQAFILFRELYPGYREEEIGK 318
KK +L ++ L P + GD++ ID + VECTS+V+QA F E +P YR E+ +
Sbjct: 506 KKRGGYLLEL-LNPSEVFGDIM-----IDYTYVECTSAVMQALKHFHEHFPDYRAAEVRE 559
Query: 319 CIKNSSKFIENSQRKDGSWVGTWGVCFTYGTFFAVKGLIASGRTYENSSS---IRRACDF 489
+ F QR DGSW G+WGVCFTYGT+F ++ G TY++ ++ + +AC+F
Sbjct: 560 TLNQGLDFCRRKQRADGSWEGSWGVCFTYGTWFGLEAFACMGHTYQDGAACAEVAQACNF 619
Query: 490 LLSKQLSTGGWGETYLSSETESYVSATSPHAVNTAWAMLALI 615
LLS+Q++ GGWGE + S E YV + +T WA++ L+
Sbjct: 620 LLSQQMADGGWGEDFESCEQRRYVQSARSQVHSTCWALMGLM 661
Score = 43.9 bits (102), Expect = 4e-04
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2
Query: 32 NKDGTFSTYECKRTTSLLEVLNPSESFLNIIVDY 133
N DG F+TYE KR LLE+LNPSE F +I++DY
Sbjct: 496 NADGGFATYEKKRGGYLLELLNPSEVFGDIMIDY 529
Score = 31.2 bits (69), Expect = 2.6
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Frame = +1
Query: 328 NSSKFIENSQRKDGSWVGTWGVCFTYGTFFAVKGLIASGRTYENSSSI---RRACDFLLS 498
N F Q +DG W G +G G F + GL+ + S +L S
Sbjct: 80 NGVTFYAKLQAEDGHWAGDYG-----GPLFLLPGLLITCHISHISLPAGYREEMVRYLRS 134
Query: 499 KQLSTGGWGETYLSSETESYVSATS 573
QL GGWG L E +S V T+
Sbjct: 135 VQLPDGGWG---LHIEDKSTVFGTA 156
>ERG7_RAT (P48450) Lanosterol synthase (EC 5.4.99.7)|
(Oxidosqualene--lanosterol cyclase)
(2,3-epoxysqualene--lanosterol cyclase) (OSC)
Length = 733
Score = 124 bits (311), Expect = 2e-28
Identities = 62/151 (41%), Positives = 89/151 (58%), Gaps = 4/151 (2%)
Frame = +1
Query: 175 LIPFHILGDLIHLLQTIDRS-VECTSSVLQAFILFRELYPGYREEEIGKCIKNSSKFIEN 351
L P + GD++ ID + VECTS+V+QA FRE +P +R E + + F
Sbjct: 516 LNPSEVFGDIM-----IDYTYVECTSAVMQALRHFREYFPDHRATESRETLNQGLDFCRK 570
Query: 352 SQRKDGSWVGTWGVCFTYGTFFAVKGLIASGRTYENSSS---IRRACDFLLSKQLSTGGW 522
QR DGSW G+WGVCFTYGT+F ++ G Y+N ++ + +AC FLLS+Q++ GGW
Sbjct: 571 KQRADGSWEGSWGVCFTYGTWFGLEAFACMGHIYQNRTACAEVAQACHFLLSRQMADGGW 630
Query: 523 GETYLSSETESYVSATSPHAVNTAWAMLALI 615
GE + S E YV + +T WA+L L+
Sbjct: 631 GEDFESCEQRRYVQSAGSQVHSTCWALLGLM 661
Score = 45.1 bits (105), Expect = 2e-04
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2
Query: 32 NKDGTFSTYECKRTTSLLEVLNPSESFLNIIVDY 133
N DG F+TYE KR LLE+LNPSE F +I++DY
Sbjct: 496 NSDGGFATYETKRGGYLLELLNPSEVFGDIMIDY 529
Score = 30.0 bits (66), Expect = 5.8
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Frame = +1
Query: 328 NSSKFIENSQRKDGSWVGTWGVCFTYGTFFAVKGLIASGRTYE---NSSSIRRACDFLLS 498
N F Q +DG W G +G G F + GL+ + + +L S
Sbjct: 80 NGVTFYAKLQAEDGHWAGDYG-----GPLFLLPGLLITCHIAHIPLPAGYREEMVRYLRS 134
Query: 499 KQLSTGGWGETYLSSETESYVSATS 573
QL GGWG L E +S V T+
Sbjct: 135 VQLPDGGWG---LHIEDKSTVFGTA 156
>ERG7_PNECA (Q96WJ0) Lanosterol synthase (EC 5.4.99.7)|
(Oxidosqualene--lanosterol cyclase)
(2,3-epoxysqualene--lanosterol cyclase) (OSC)
Length = 719
Score = 121 bits (303), Expect = 2e-27
Identities = 65/149 (43%), Positives = 85/149 (57%), Gaps = 2/149 (1%)
Frame = +1
Query: 181 PFHILGDLIHLLQTIDRSV-ECTSSVLQAFILFRELYPGYREEEIGKCIKNSSKFIENSQ 357
P + GD++ I+ S ECT++ + A FR L YR EI K +KN+ +FI+ SQ
Sbjct: 512 PAEVFGDIM-----IEHSYPECTTAAVTALCYFRSLCSHYRGPEINKSVKNAIQFIKESQ 566
Query: 358 RKDGSWVGTWGVCFTYGTFFAVKGLIASGRTYENSSSIRRACDFLLSKQLSTGGWGETYL 537
R DGSW +W +CFTY T FA++ L YENS RRACDFL++KQ GGW E Y
Sbjct: 567 RPDGSWYESWAICFTYATMFALESLSCVKDFYENSFHSRRACDFLVNKQEEDGGWSEGYQ 626
Query: 538 SSETESYV-SATSPHAVNTAWAMLALIYA 621
S + T V TAWA + L+YA
Sbjct: 627 SCTDGIWTRHPTGSQVVQTAWACIGLMYA 655
Score = 36.6 bits (83), Expect = 0.062
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +2
Query: 32 NKDGTFSTYECKRTTSLLEVLNPSESFLNIIVDY 133
NKDG F++YE R S LE +NP+E F +I++++
Sbjct: 490 NKDGGFASYELIRGPSWLEFINPAEVFGDIMIEH 523
>HFC1_HAEIN (P33397) Outer membrane usher protein hifC precursor|
Length = 837
Score = 29.3 bits (64), Expect = 9.9
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Frame = +1
Query: 412 FFAVKGLIASGRTYENSSSI------RRACDFLLSKQLSTGGWGETYLSSETESY 558
F+ + I RT+ S R F +S S G WG YLS +T +Y
Sbjct: 469 FYTLSDTIGLNRTFRQFSGAYLPEIYRPKNQFQVSLSQSLGNWGNLYLSGQTYNY 523
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,845,803
Number of Sequences: 219361
Number of extensions: 1746600
Number of successful extensions: 4031
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4019
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)