ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags25p11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059702.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 3e-70
2emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4,... 266 7e-68
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 266 7e-68
4dbj|AK073937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 7e-68
5gb|AY111696.1| Zea mays CL5853_-1 mRNA sequence 206 6e-50
6dbj|AK107413.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
7ref|XM_493900.1| Oryza sativa (japonica cultivar-group), predic... 54 5e-04
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
9dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0... 54 5e-04
10gb|AC109172.11| Mus musculus chromosome 14, clone RP23-279B8, co... 48 0.031
11ref|XM_465372.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.12
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
13dbj|AP004856.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
14gb|AC183677.2| Pan troglodytes BAC clone CH251-520E8 from chromo... 42 1.9
15emb|AL161457.13| Human DNA sequence from clone RP11-88I18 on chr... 42 1.9
16emb|AL159990.12| Human DNA sequence from clone RP11-141J10 on ch... 42 1.9
17gb|AC183111.3| Pan troglodytes BAC clone CH251-294L3 from chromo... 42 1.9
18emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on ch... 42 1.9
19emb|AJ508980.1|ERO508980 Euphorbia robivelonae ITS1, 5.8S rRNA g... 42 1.9
20gb|AC182393.2| Pan troglodytes BAC clone CH251-503C15 from chrom... 42 1.9
21gb|AF537475.1| Euphorbia geroldii internal transcribed spacer 1,... 42 1.9
22gb|AF537474.1| Euphorbia thouarsiana internal transcribed spacer... 42 1.9
23ref|NM_123074.1| Arabidopsis thaliana unknown protein AT5G37150 ... 40 7.6
24gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.6
25gb|AY456036.1| Gibberella moniliformis putative phytochrome-like... 40 7.6
26ref|XM_566917.1| Cryptococcus neoformans var. neoformans JEC21 u... 40 7.6
27gb|AC124006.4| Mus musculus BAC clone RP24-528C3 from chromosome... 40 7.6
28gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 7.6
29emb|CR378669.1| Photobacterium profundum SS9; segment 7/12 40 7.6
30dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 7.6
31gb|AY944797.1| Rhizopus oryzae strain FSU757 clone 2 beta-tubuli... 40 7.6
32gb|AF297647.2|AF297647 Pseudomonas aeruginosa DNA polymerase III... 40 7.6
33gb|AC093628.3| Homo sapiens BAC clone RP11-98N20 from 4, complet... 40 7.6
34gb|AE004784.1| Pseudomonas aeruginosa PAO1, section 345 of 529 o... 40 7.6
35gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum)... 40 7.6
36dbj|AB017068.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.6
37gb|AC004063.1|AC004063 Homo sapiens chromosome 4 clone B32I8, co... 40 7.6
38gb|AC122394.5| Mus musculus BAC clone RP24-85N8 from 6, complete... 40 7.6
39dbj|AP001862.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 40 7.6 
>dbj|AK059702.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D01, full
           insert sequence
          Length = 1547

 Score =  274 bits (138), Expect = 3e-70
 Identities = 318/378 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   ttgcaagttcagaaatcgcggccctgactgaacaaaagaacgagctagccaaggagctag 61
           |||| ||||||||||| |   |||||| |||||| ||||||  |||||||||||| || |
Sbjct: 252 ttgccagttcagaaatggaaaccctgattgaacagaagaacatgctagccaaggaacttg 311

                                                                       
Query: 62  aagctagcaaagatgaagttgagaaggttaagaaggcaatggagggtctggcatctgcct 121
           |||||||||||| ||||||||||||| |||||||||| ||||||||||  || ||||| |
Sbjct: 312 aagctagcaaagctgaagttgagaagattaagaaggccatggagggtcaagcctctgctt 371

                                                                       
Query: 122 tgcacgagatgtcagctgagtcgagagaggcgcaggagaaatacctcatcaagcaggaag 181
           ||||||| ||||||||| |   ||||| |||||||||||| |||||    || || || |
Sbjct: 372 tgcacgaaatgtcagctcaactgagagtggcgcaggagaagtacctagataaacaagagg 431

                                                                       
Query: 182 agattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaagg 241
           ||||||| || ||||| |||||  ||||||| ||||||   |||||||| ||| | ||||
Sbjct: 432 agattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaagg 491

                                                                       
Query: 242 agagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtctg 301
           ||||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||| |
Sbjct: 492 agagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgcctcaagaagtcag 551

                                                                       
Query: 302 ttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagctaa 361
           |||| |||||||| |||||| | ||||  |  ||||||||||||||||| ||||||||||
Sbjct: 552 ttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagctaa 611

                             
Query: 362 gttttgtcaactctatta 379
           ||||||| ||||| ||||
Sbjct: 612 gttttgttaactcaatta 629



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 483 tgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggccg 542
           |||| |||||||| ||||||||| | ||||| |||||  |  ||||||||||||||||||
Sbjct: 732 tgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggccg 791

                
Query: 543 agacc 547
           |||||
Sbjct: 792 agacc 796
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>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12,
             complete sequence
          Length = 179644

 Score =  266 bits (134), Expect = 7e-68
 Identities = 317/378 (83%)
 Strand = Plus / Plus

                                                                         
Query: 2     ttgcaagttcagaaatcgcggccctgactgaacaaaagaacgagctagccaaggagctag 61
             |||| ||||||||||| |   |||||| |||||| ||||||  |||||||||||| || |
Sbjct: 76788 ttgccagttcagaaatggaaaccctgattgaacagaagaacatgctagccaaggaacttg 76847

                                                                         
Query: 62    aagctagcaaagatgaagttgagaaggttaagaaggcaatggagggtctggcatctgcct 121
             |||||||||||| ||||||||||||| |||||||||| ||||||||||  || ||||| |
Sbjct: 76848 aagctagcaaagctgaagttgagaagattaagaaggccatggagggtcaagcctctgctt 76907

                                                                         
Query: 122   tgcacgagatgtcagctgagtcgagagaggcgcaggagaaatacctcatcaagcaggaag 181
             ||||||| ||||||||| |   ||||| |||||||||||| |||||    || || || |
Sbjct: 76908 tgcacgaaatgtcagctcaactgagagtggcgcaggagaagtacctagataaacaagagg 76967

                                                                         
Query: 182   agattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaagg 241
             ||||||| || ||||| |||||  ||||||| ||||||   |||||||| ||| | ||||
Sbjct: 76968 agattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaagg 77027

                                                                         
Query: 242   agagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtctg 301
             ||||||||||||| |||||||| |||| ||||||||| |||||||| ||||||||||| |
Sbjct: 77028 agagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgtctcaagaagtcag 77087

                                                                         
Query: 302   ttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagctaa 361
             |||| |||||||| |||||| | ||||  |  ||||||||||||||||| ||||||||||
Sbjct: 77088 ttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagctaa 77147

                               
Query: 362   gttttgtcaactctatta 379
             ||||||| ||||| ||||
Sbjct: 77148 gttttgttaactcaatta 77165



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 483   tgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggccg 542
             |||| |||||||| ||||||||| | ||||| |||||  |  ||||||||||||||||||
Sbjct: 77268 tgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggccg 77327

                  
Query: 543   agacc 547
             |||||
Sbjct: 77328 agacc 77332
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  266 bits (134), Expect = 7e-68
 Identities = 317/378 (83%)
 Strand = Plus / Plus

                                                                            
Query: 2        ttgcaagttcagaaatcgcggccctgactgaacaaaagaacgagctagccaaggagctag 61
                |||| ||||||||||| |   |||||| |||||| ||||||  |||||||||||| || |
Sbjct: 29940036 ttgccagttcagaaatggaaaccctgattgaacagaagaacatgctagccaaggaacttg 29940095

                                                                            
Query: 62       aagctagcaaagatgaagttgagaaggttaagaaggcaatggagggtctggcatctgcct 121
                |||||||||||| ||||||||||||| |||||||||| ||||||||||  || ||||| |
Sbjct: 29940096 aagctagcaaagctgaagttgagaagattaagaaggccatggagggtcaagcctctgctt 29940155

                                                                            
Query: 122      tgcacgagatgtcagctgagtcgagagaggcgcaggagaaatacctcatcaagcaggaag 181
                ||||||| ||||||||| |   ||||| |||||||||||| |||||    || || || |
Sbjct: 29940156 tgcacgaaatgtcagctcaactgagagtggcgcaggagaagtacctagataaacaagagg 29940215

                                                                            
Query: 182      agattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaagg 241
                ||||||| || ||||| |||||  ||||||| ||||||   |||||||| ||| | ||||
Sbjct: 29940216 agattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaagg 29940275

                                                                            
Query: 242      agagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtctg 301
                ||||||||||||| |||||||| |||| ||||||||| |||||||| ||||||||||| |
Sbjct: 29940276 agagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgtctcaagaagtcag 29940335

                                                                            
Query: 302      ttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagctaa 361
                |||| |||||||| |||||| | ||||  |  ||||||||||||||||| ||||||||||
Sbjct: 29940336 ttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagctaa 29940395

                                  
Query: 362      gttttgtcaactctatta 379
                ||||||| ||||| ||||
Sbjct: 29940396 gttttgttaactcaatta 29940413



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                            
Query: 483      tgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggccg 542
                |||| |||||||| ||||||||| | ||||| |||||  |  ||||||||||||||||||
Sbjct: 29940516 tgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggccg 29940575

                     
Query: 543      agacc 547
                |||||
Sbjct: 29940576 agacc 29940580
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>dbj|AK073937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075G21, full
            insert sequence
          Length = 2570

 Score =  266 bits (134), Expect = 7e-68
 Identities = 317/378 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2    ttgcaagttcagaaatcgcggccctgactgaacaaaagaacgagctagccaaggagctag 61
            |||| ||||||||||| |   |||||| |||||| ||||||  |||||||||||| || |
Sbjct: 1428 ttgccagttcagaaatggaaaccctgattgaacagaagaacatgctagccaaggaacttg 1487

                                                                        
Query: 62   aagctagcaaagatgaagttgagaaggttaagaaggcaatggagggtctggcatctgcct 121
            |||||||||||| ||||||||||||| |||||||||| ||||||||||  || ||||| |
Sbjct: 1488 aagctagcaaagctgaagttgagaagattaagaaggccatggagggtcaagcctctgctt 1547

                                                                        
Query: 122  tgcacgagatgtcagctgagtcgagagaggcgcaggagaaatacctcatcaagcaggaag 181
            ||||||| ||||||||| |   ||||| |||||||||||| |||||    || || || |
Sbjct: 1548 tgcacgaaatgtcagctcaactgagagtggcgcaggagaagtacctagataaacaagagg 1607

                                                                        
Query: 182  agattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaagg 241
            ||||||| || ||||| |||||  ||||||| ||||||   |||||||| ||| | ||||
Sbjct: 1608 agattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaagg 1667

                                                                        
Query: 242  agagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtctg 301
            ||||||||||||| |||||||| |||| ||||||||| |||||||| ||||||||||| |
Sbjct: 1668 agagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgtctcaagaagtcag 1727

                                                                        
Query: 302  ttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagctaa 361
            |||| |||||||| |||||| | ||||  |  ||||||||||||||||| ||||||||||
Sbjct: 1728 ttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagctaa 1787

                              
Query: 362  gttttgtcaactctatta 379
            ||||||| ||||| ||||
Sbjct: 1788 gttttgttaactcaatta 1805



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                        
Query: 483  tgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggccg 542
            |||| |||||||| ||||||||| | ||||| |||||  |  ||||||||||||||||||
Sbjct: 1908 tgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggccg 1967

                 
Query: 543  agacc 547
            |||||
Sbjct: 1968 agacc 1972
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>gb|AY111696.1| Zea mays CL5853_-1 mRNA sequence
          Length = 593

 Score =  206 bits (104), Expect = 6e-50
 Identities = 322/395 (81%)
 Strand = Plus / Minus

                                                                       
Query: 30  tgaacaaaagaacgagctagccaaggagctagaagctagcaaagatgaagttgagaaggt 89
           |||||| |||||| |||| ||  | ||||| || ||||||||||||||  |||||||  |
Sbjct: 550 tgaacagaagaaccagctggctgacgagcttgaggctagcaaagatgagcttgagaaaat 491

                                                                       
Query: 90  taagaaggcaatggagggtctggcatctgccttgcacgagatgtcagctgagtcgagaga 149
           |||||||||||||||||||||||| || ||||| || || ||||||||||| || |||||
Sbjct: 490 taagaaggcaatggagggtctggcctcagccttacaggaaatgtcagctgaatccagaga 431

                                                                       
Query: 150 ggcgcaggagaaatacctcatcaagcaggaagagattgagcgcgctcgggcacaaataga 209
           |||||| || || |||||  | || || || ||||| ||||| |||| ||||||  ||||
Sbjct: 430 ggcgcangaaaagtaccttctgaaacaagatgagatggagcgtgctcaggcacaggtaga 371

                                                                       
Query: 210 ggaactcaataatagtctgcaaaatgccaaggagagctatgaggtgatgcttgatgaagt 269
           ||| || ||    |||||| | |||   ||||||| ||||||| |  |||||||||| | 
Sbjct: 370 ggagcttaacttgagtctgaagaatattaaggagaactatgagctactgcttgatgaggc 311

                                                                       
Query: 270 aaactatgagaaagtttgcctcaagaagtctgttgaaagaatggaggcagaagctaagaa 329
           |||||||||||| |||||||| | |||  | ||||||||| |||| ||||||||||||| 
Sbjct: 310 aaactatgagaaggtttgccttacgaaagcagttgaaagactggaagcagaagctaagag 251

                                                                       
Query: 330 cgtttctgaggaatggcagtcaaaagagctaagttttgtcaactctattaggaagtcgga 389
            |    ||||||||||||||| ||||||||||||||||||| |||||||| ||| || ||
Sbjct: 250 agcgcatgaggaatggcagtccaaagagctaagttttgtcagctctattaagaattcaga 191

                                              
Query: 390 agaagagatcgtcgctgtcaaagctcaaatggaca 424
           ||||||||| ||||||||||  | |||||||||||
Sbjct: 190 agaagagatagtcgctgtcagggttcaaatggaca 156
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>dbj|AK107413.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-E11,
          full insert sequence
          Length = 1814

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                      
Query: 2  ttgcaagttcagaaatcgcggccctgactgaacaaaagaacgagctagccaaggagctag 61
          |||| ||||||||||| |   |||||| |||||| ||||||  |||||||||||| || |
Sbjct: 81 ttgccagttcagaaatggaaaccctgattgaacagaagaacatgctagccaaggaacttg 22

                               
Query: 62 aagctagcaaagatgaagttg 82
          |||||||||||| ||||||||
Sbjct: 21 aagctagcaaagctgaagttg 1
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>ref|XM_493900.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2688

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 236  ccaaggagagctatgaggtgatgcttgatgaagtaaactatga 278
            |||||||||| |||||||| ||||||||||| | |||||||||
Sbjct: 1655 ccaaggagagttatgaggtaatgcttgatgaggcaaactatga 1697
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 236    ccaaggagagctatgaggtgatgcttgatgaagtaaactatga 278
              |||||||||| |||||||| ||||||||||| | |||||||||
Sbjct: 954990 ccaaggagagttatgaggtaatgcttgatgaggcaaactatga 954948
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>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04
          Length = 175439

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 236   ccaaggagagctatgaggtgatgcttgatgaagtaaactatga 278
             |||||||||| |||||||| ||||||||||| | |||||||||
Sbjct: 45387 ccaaggagagttatgaggtaatgcttgatgaggcaaactatga 45345
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>gb|AC109172.11| Mus musculus chromosome 14, clone RP23-279B8, complete sequence
          Length = 190469

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 75    tgaagttgagaaggttaagaaggcaatg 102
             ||||||||||||||| ||||||||||||
Sbjct: 47175 tgaagttgagaaggtgaagaaggcaatg 47202
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>ref|XM_465372.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2169

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 246  ctatgaggtgatgcttgatgaagtaaactatgaga 280
            ||||||||| ||||||||||||| |||||| ||||
Sbjct: 1512 ctatgaggtaatgcttgatgaagcaaactacgaga 1546
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 246      ctatgaggtgatgcttgatgaagtaaactatgaga 280
                ||||||||| ||||||||||||| |||||| ||||
Sbjct: 14175259 ctatgaggtaatgcttgatgaagcaaactacgaga 14175293
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>dbj|AP004856.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1570_H12
          Length = 129767

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 246   ctatgaggtgatgcttgatgaagtaaactatgaga 280
             ||||||||| ||||||||||||| |||||| ||||
Sbjct: 75279 ctatgaggtaatgcttgatgaagcaaactacgaga 75313
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>gb|AC183677.2| Pan troglodytes BAC clone CH251-520E8 from chromosome 9, complete
             sequence
          Length = 174731

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   acctcatcaagcaggaagaga 184
             |||||||||||||||||||||
Sbjct: 63121 acctcatcaagcaggaagaga 63101
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>emb|AL161457.13| Human DNA sequence from clone RP11-88I18 on chromosome 9 Contains part
             of the PGM5 gene for phosphoglucomutase 5 and 2 novel
             genes, complete sequence
          Length = 124388

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 164   acctcatcaagcaggaagaga 184
             |||||||||||||||||||||
Sbjct: 26084 acctcatcaagcaggaagaga 26104
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>emb|AL159990.12| Human DNA sequence from clone RP11-141J10 on chromosome 9 Contains the 3'
              end of the TRPM3 gene for transient receptor potential
              cation channel subfamily M, member 3 (MLSN2, LTRPC3,
              FLJ11726) and two novel genes, complete sequence
          Length = 148833

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 446    gaaaaagaagctgaaaatacc 466
              |||||||||||||||||||||
Sbjct: 128723 gaaaaagaagctgaaaatacc 128703
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>gb|AC183111.3| Pan troglodytes BAC clone CH251-294L3 from chromosome 9, complete
             sequence
          Length = 150130

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   acctcatcaagcaggaagaga 184
             |||||||||||||||||||||
Sbjct: 38515 acctcatcaagcaggaagaga 38495
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>emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on chromosome 13 Contains
             part of the gene for a novel protein similar to axonemal
             dynein heavy polypeptide (DNAH), complete sequence
          Length = 127451

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   aagaagtctgttgaaagaatg 312
             |||||||||||||||||||||
Sbjct: 38082 aagaagtctgttgaaagaatg 38102
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>emb|AJ508980.1|ERO508980 Euphorbia robivelonae ITS1, 5.8S rRNA gene and ITS2, specimen
           voucher Rauh 73927 (HEID)
          Length = 649

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 109 ctggcatctgccttgcacgag 129
           |||||||||||||||||||||
Sbjct: 114 ctggcatctgccttgcacgag 134
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>gb|AC182393.2| Pan troglodytes BAC clone CH251-503C15 from chromosome 9, complete
              sequence
          Length = 230693

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 164    acctcatcaagcaggaagaga 184
              |||||||||||||||||||||
Sbjct: 116891 acctcatcaagcaggaagaga 116911
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>gb|AF537475.1| Euphorbia geroldii internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence
          Length = 650

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 109 ctggcatctgccttgcacgag 129
           |||||||||||||||||||||
Sbjct: 114 ctggcatctgccttgcacgag 134
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>gb|AF537474.1| Euphorbia thouarsiana internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence
          Length = 650

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 109 ctggcatctgccttgcacgag 129
           |||||||||||||||||||||
Sbjct: 114 ctggcatctgccttgcacgag 134
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>ref|NM_123074.1| Arabidopsis thaliana unknown protein AT5G37150 mRNA, complete cds
          Length = 2520

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 301  gttgaaagaatggaggcagaagct 324
            |||||||||||||||| |||||||
Sbjct: 1132 gttgaaagaatggaggaagaagct 1155
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     aggaagagattgagcgcgct 195
               ||||||||||||||||||||
Sbjct: 1877356 aggaagagattgagcgcgct 1877337
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>gb|AY456036.1| Gibberella moniliformis putative phytochrome-like histidine kinase
            PHY1p (PHY1) gene, complete cds
          Length = 4465

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 526  cgaggaagccaaggccgaga 545
            ||||||||||||||||||||
Sbjct: 4414 cgaggaagccaaggccgaga 4433
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>ref|XM_566917.1| Cryptococcus neoformans var. neoformans JEC21 uracil DNA
           N-glycosylase (CNA06880) partial mRNA
          Length = 1220

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 aggaagagattgagcgcgct 195
           ||||||||||||||||||||
Sbjct: 52  aggaagagattgagcgcgct 33
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>gb|AC124006.4| Mus musculus BAC clone RP24-528C3 from chromosome 6, complete sequence
          Length = 146418

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    atgccaaggagagctatgag 252
              ||||||||||||||||||||
Sbjct: 129745 atgccaaggagagctatgag 129764
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 92      agaaggcaatggagggtctg 111
               ||||||||||||||||||||
Sbjct: 4910082 agaaggcaatggagggtctg 4910063
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>emb|CR378669.1| Photobacterium profundum SS9; segment 7/12
          Length = 349285

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 443    aatgaaaaagaagctgaaaa 462
              ||||||||||||||||||||
Sbjct: 343232 aatgaaaaagaagctgaaaa 343251
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1915358 aagctcaaatggataagtacttgg 1915335



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1915316 aagctcaaatggataagtacttgg 1915293



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1915274 aagctcaaatggataagtacttgg 1915251



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1915232 aagctcaaatggataagtacttgg 1915209



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1915190 aagctcaaatggataagtacttgg 1915167



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1915148 aagctcaaatggataagtacttgg 1915125



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1915106 aagctcaaatggataagtacttgg 1915083



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1915064 aagctcaaatggataagtacttgg 1915041



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1915022 aagctcaaatggataagtacttgg 1914999



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1914980 aagctcaaatggataagtacttgg 1914957



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1914938 aagctcaaatggataagtacttgg 1914915



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1914896 aagctcaaatggataagtacttgg 1914873



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1914854 aagctcaaatggataagtacttgg 1914831



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1914812 aagctcaaatggataagtacttgg 1914789



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 410     aagctcaaatggacaagtacttgg 433
               ||||||||||||| ||||||||||
Sbjct: 1914728 aagctcaaatggataagtacttgg 1914705
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>gb|AY944797.1| Rhizopus oryzae strain FSU757 clone 2 beta-tubulin (btub) gene,
           partial cds
          Length = 1279

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 449 aaagaagctgaaaataccga 468
           ||||||||||||||||||||
Sbjct: 437 aaagaagctgaaaataccga 456
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>gb|AF297647.2|AF297647 Pseudomonas aeruginosa DNA polymerase III (dnaE) gene, complete cds
          Length = 3522

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 525 gcgaggaagccaaggccgag 544
           ||||||||||||||||||||
Sbjct: 434 gcgaggaagccaaggccgag 453
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>gb|AC093628.3| Homo sapiens BAC clone RP11-98N20 from 4, complete sequence
          Length = 159991

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     aaagatgaagttgagaaggt 89
              ||||||||||||||||||||
Sbjct: 107324 aaagatgaagttgagaaggt 107343
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>gb|AE004784.1| Pseudomonas aeruginosa PAO1, section 345 of 529 of the complete
            genome
          Length = 12469

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 525  gcgaggaagccaaggccgag 544
            ||||||||||||||||||||
Sbjct: 3194 gcgaggaagccaaggccgag 3175
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>gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome
          Length = 641454

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 445    tgaaaaagaagctgaaaata 464
              ||||||||||||||||||||
Sbjct: 229736 tgaaaaagaagctgaaaata 229755
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>dbj|AB017068.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJG14
          Length = 86121

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 301   gttgaaagaatggaggcagaagct 324
             |||||||||||||||| |||||||
Sbjct: 64857 gttgaaagaatggaggaagaagct 64880
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>gb|AC004063.1|AC004063 Homo sapiens chromosome 4 clone B32I8, complete sequence
          Length = 177014

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    aaagatgaagttgagaaggt 89
             ||||||||||||||||||||
Sbjct: 42769 aaagatgaagttgagaaggt 42788
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>gb|AC122394.5| Mus musculus BAC clone RP24-85N8 from 6, complete sequence
          Length = 215914

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   atgccaaggagagctatgag 252
             ||||||||||||||||||||
Sbjct: 65130 atgccaaggagagctatgag 65149
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>dbj|AP001862.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2060O22, complete
             sequence
          Length = 111557

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    aaagatgaagttgagaaggt 89
             ||||||||||||||||||||
Sbjct: 61389 aaagatgaagttgagaaggt 61408


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,468,774
Number of Sequences: 3902068
Number of extensions: 5468774
Number of successful extensions: 111130
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110924
Number of HSP's gapped (non-prelim): 198
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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