ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26e16 |
|---|---|
| Clone Library Name | barley_pub |
>BIRC6_HUMAN (Q9NR09) Baculoviral IAP repeat-containing protein 6| (Ubiquitin-conjugating BIR-domain enzyme apollon) Length = 4829 Score = 42.4 bits (98), Expect = 8e-04 Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 6/74 (8%) Frame = +3 Query: 321 DHHYLENI--AHGTGGRKWVKKVQQEWGILEKNLP----DYIYVRVFEDRMDLIRAVIIG 482 ++HY+ + A+ +++ QE L +LP ++VR E+R+D+++ +I G Sbjct: 4528 NYHYMSQVKNANDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITG 4587 Query: 483 ASGTPYQDGLFFFD 524 + TPY +G F FD Sbjct: 4588 PADTPYANGCFEFD 4601
>UBE2T_XENLA (Q7ZY08) Ubiquitin-conjugating enzyme E2 T (EC 6.3.2.19)| (Ubiquitin-protein ligase T) (Ubiquitin carrier protein T) Length = 192 Score = 38.9 bits (89), Expect = 0.009 Identities = 19/48 (39%), Positives = 29/48 (60%) Frame = +3 Query: 372 VKKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 V ++++E +L K P + E MD +RA IIG SG+PY+ G+F Sbjct: 4 VSRLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIF 51
>UBC17_CAEEL (Q11076) Probable ubiquitin-conjugating enzyme protein 17| Length = 679 Score = 38.9 bits (89), Expect = 0.009 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%) Frame = +3 Query: 363 RKWVKKVQQEWGILEKNLP----DYIYVRVFEDRMDLIRAVIIGASGTPYQDGLFFFD 524 R K++ +E + LP + IYV E R+D+I+ +I G TPY +GLF FD Sbjct: 408 RDRTKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFD 465
>UBC6_ASHGO (Q74Z34) Ubiquitin-conjugating enzyme E2 6 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC6) (Ubiquitin carrier protein UBC6) Length = 242 Score = 35.0 bits (79), Expect = 0.13 Identities = 17/51 (33%), Positives = 29/51 (56%) Frame = +3 Query: 363 RKWVKKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 R+ K++ +E+ ++ +N P YI ED + + VI G TPY+DG + Sbjct: 4 RQAYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQY 54
>COP10_ARATH (Q9LJD7) Constitutive photomorphogenesis protein 10| Length = 182 Score = 33.9 bits (76), Expect = 0.28 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +3 Query: 375 KKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLFFFD 524 K++Q+E L + P D + A IIG SGTPY+ G+FF D Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLD 88
>UBC6_YEAST (P33296) Ubiquitin-conjugating enzyme E2 6 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC6) (Ubiquitin carrier protein UBC6) Length = 250 Score = 32.3 bits (72), Expect = 0.82 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = +3 Query: 375 KKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 K++ +E+ ++ +N P YI R ED + +I G + TPY+ G + Sbjct: 8 KRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQY 54
>UBE2T_HUMAN (Q9NPD8) Ubiquitin-conjugating enzyme E2 T (EC 6.3.2.19)| (Ubiquitin-protein ligase T) (Ubiquitin carrier protein T) Length = 197 Score = 32.3 bits (72), Expect = 0.82 Identities = 16/46 (34%), Positives = 28/46 (60%) Frame = +3 Query: 378 KVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 ++++E +L P I +D+MD +RA I+G + TPY+ G+F Sbjct: 6 RLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVF 51
>UBC2_SCHPO (P23566) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase ubc2) (Ubiquitin carrier protein ubc2) (RAD6 homolog) Length = 151 Score = 30.0 bits (66), Expect = 4.1 Identities = 13/47 (27%), Positives = 28/47 (59%) Frame = +3 Query: 375 KKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 +++ +++ ++++ P + D + L AVIIG + TP++DG F Sbjct: 7 RRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTF 53
>UBC2_YEAST (P06104) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) (Radiation sensitivity protein 6) Length = 172 Score = 30.0 bits (66), Expect = 4.1 Identities = 12/47 (25%), Positives = 28/47 (59%) Frame = +3 Query: 375 KKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 +++ +++ ++++ P + D + + A+IIG + TPY+DG F Sbjct: 7 RRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTF 53
>UBC2_ASHGO (Q75EB8) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 170 Score = 30.0 bits (66), Expect = 4.1 Identities = 12/47 (25%), Positives = 28/47 (59%) Frame = +3 Query: 375 KKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 +++ +++ ++++ P + D + + A+IIG + TPY+DG F Sbjct: 7 RRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTF 53
>SPEE_METJA (Q57761) Probable spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 293 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/61 (27%), Positives = 31/61 (50%) Frame = +3 Query: 240 KSVDVVMADEAADSDCLKHFDVLQCPPDHHYLENIAHGTGGRKWVKKVQQEWGILEKNLP 419 ++VD V DE C K+ L C D+ + I T G K+V + ++++ ++ + P Sbjct: 108 ETVDFVELDEKVIEACKKYMPKLSCEIDNEKVNLII--TDGIKYVAETEKKYDVIIVDCP 165 Query: 420 D 422 D Sbjct: 166 D 166
>UBC2_KLULA (Q6CUD9) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 164 Score = 30.0 bits (66), Expect = 4.1 Identities = 12/47 (25%), Positives = 28/47 (59%) Frame = +3 Query: 375 KKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 +++ +++ ++++ P + D + + A+IIG + TPY+DG F Sbjct: 7 RRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTF 53
>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin| phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 1253 Score = 30.0 bits (66), Expect = 4.1 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = +3 Query: 87 DGSNS-DAMDXXXXXXXXXXXXXGDDIDKNEDENRMEASECTTVTTNDSS-AEKSVDVVM 260 D SNS D+ D D D NE N ++S+ + + +DSS + S D Sbjct: 860 DSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSD 919 Query: 261 ADEAADS 281 + ++DS Sbjct: 920 SSNSSDS 926
>SRP40_YEAST (P32583) Suppressor protein SRP40| Length = 406 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/66 (21%), Positives = 28/66 (42%) Frame = +3 Query: 87 DGSNSDAMDXXXXXXXXXXXXXGDDIDKNEDENRMEASECTTVTTNDSSAEKSVDVVMAD 266 D S+SD+ D D + + + + +++DSS+++S +D Sbjct: 211 DSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDSSSDESTSSDSSD 270 Query: 267 EAADSD 284 +DSD Sbjct: 271 SDSDSD 276
>UBC2_CANGA (Q6FR76) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 167 Score = 29.6 bits (65), Expect = 5.3 Identities = 12/47 (25%), Positives = 28/47 (59%) Frame = +3 Query: 375 KKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 +++ +++ ++++ P + D + + A+IIG + TPY+DG F Sbjct: 7 RRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTF 53
>UBC2_CANAL (O74201) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) (Radiation sensitivity protein 6) Length = 179 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/47 (27%), Positives = 27/47 (57%) Frame = +3 Query: 375 KKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 +++ +++ ++++ P + D + AVIIG S TP++DG F Sbjct: 7 RRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTF 53
>HUWE1_MOUSE (Q7TMY8) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (E3Histone) Length = 4377 Score = 29.6 bits (65), Expect = 5.3 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +3 Query: 159 DIDKNEDENRMEASECTTVTTNDSSAEKSVD 251 D K + ENR ++++CT TNDS+ + D Sbjct: 2706 DKGKEDKENRDQSAQCTVTKTNDSTEQNVSD 2736
>UBE2S_HUMAN (Q16763) Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19)| (Ubiquitin-conjugating enzyme E2-24 kDa) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (E2-EPF5) Length = 222 Score = 29.3 bits (64), Expect = 7.0 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +3 Query: 372 VKKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 ++ V +E L + PD I V E+ + ++ I G GTPY GLF Sbjct: 13 IRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLF 60
>UBC2_DEBHA (Q6BU36) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 168 Score = 29.3 bits (64), Expect = 7.0 Identities = 12/47 (25%), Positives = 27/47 (57%) Frame = +3 Query: 375 KKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 +++ +++ ++++ P + D + AVIIG + TP++DG F Sbjct: 7 RRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTF 53
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 29.3 bits (64), Expect = 7.0 Identities = 24/121 (19%), Positives = 46/121 (38%) Frame = -3 Query: 363 FHRYHELCFLGSDGPEGTAEHQSVSSNQNLQPRQP*QHLRTSQQKSHSLSQWCTPMLPCG 184 ++ ++L F+ + Q+ + Q +Q QH + QQ+ H Sbjct: 112 YNYQYQLMFMQQQAQQNQPPQQNQQQQHHQQQQQQPQHHQQMQQQQHHQQM--------- 162 Query: 183 SHPRFYQCHHQILKPR*TAEIQLHP*HLSLTHLNAFYLGRRSHLPVGLQSQEQQREDHFQ 4 + Q HHQ ++ + + H H + ++ H Q Q+QQ++ H Q Sbjct: 163 ---QQQQQHHQQMQQQQHHQQMQHHQLQQHQHQHQQQQQQQQHQQQHHQQQQQQQQQHHQ 219 Query: 3 Q 1 Q Sbjct: 220 Q 220
>UBE2S_MOUSE (Q921J4) Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19)| (Ubiquitin-conjugating enzyme E2-24 kDa) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (E2-EPF5) Length = 223 Score = 29.3 bits (64), Expect = 7.0 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +3 Query: 372 VKKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 ++ V +E L + PD I V E+ + ++ I G GTPY GLF Sbjct: 13 IRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLF 60
>CITG_STRMU (Q8DUC9) Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A| synthase (EC 2.7.8.25) (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase) Length = 296 Score = 28.9 bits (63), Expect = 9.1 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 Query: 339 NIAHGTGGRKWVKKVQQEWGILEKNLPDY 425 NI H G + W K Q+ +LEK+LP Y Sbjct: 228 NIIHRGGIKSWKKVQQEAQTLLEKDLPPY 256
>5HT2A_DROME (P28285) 5-hydroxytryptamine receptor 2A (5-HT receptor) (Serotonin| receptor 2A) Length = 834 Score = 28.9 bits (63), Expect = 9.1 Identities = 22/83 (26%), Positives = 36/83 (43%) Frame = -3 Query: 444 QIPSHKYNLVGSSQVCPILAELFLPTSFHRYHELCFLGSDGPEGTAEHQSVSSNQNLQPR 265 Q P+ + + ++ P+ A+ TS ++ H LC ++ P T E + S + Sbjct: 652 QTPTSQGVGIAAAAAGPMTAKTSTLTSCNQSHPLCGTANESP-STPEPR--SRQPTTPQQ 708 Query: 264 QP*QHLRTSQQKSHSLSQWCTPM 196 QP Q QQ+ LS PM Sbjct: 709 QPHQQAHQQQQQQQQLSSIANPM 731
>ARHB_XENLA (Q67FQ3) Low density lipoprotein receptor adapter protein 1-B| (Autosomal recessive hypercholesterolemia protein homolog beta) (ARH beta) (xARH) Length = 309 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Frame = +3 Query: 168 KNEDENRMEASECTTVTTNDSSAEKSVDVVMADEAAD----SDCLKHFDVLQCPPDH 326 +N+D+ S+ +++ S S+ + A +A+ DC K FDVL +H Sbjct: 176 ENKDKREKSGSDGEGASSSQSDGSSSITSLKASASANLLDFEDCTKAFDVLNASDNH 232
>UBE2A_MOUSE (Q9Z255) Ubiquitin-conjugating enzyme E2 A (EC 6.3.2.19)| (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (mHR6A) Length = 152 Score = 28.9 bits (63), Expect = 9.1 Identities = 13/47 (27%), Positives = 28/47 (59%) Frame = +3 Query: 375 KKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 +++ +++ L+++ P + E+ + + AVI G GTP++DG F Sbjct: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTF 53
>UBE2A_HUMAN (P49459) Ubiquitin-conjugating enzyme E2 A (EC 6.3.2.19)| (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (hHR6A) Length = 152 Score = 28.9 bits (63), Expect = 9.1 Identities = 13/47 (27%), Positives = 28/47 (59%) Frame = +3 Query: 375 KKVQQEWGILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLF 515 +++ +++ L+++ P + E+ + + AVI G GTP++DG F Sbjct: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTF 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,900,312 Number of Sequences: 219361 Number of extensions: 1465321 Number of successful extensions: 4106 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4014 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4104 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
