Clone Information

BLAST Search Result

Clone Name	bags26e08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_193870.1\| Oryza sativa (japonica cultivar-group), predic...	609	e-171
2	dbj\|AK121501.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	609	e-171
3	dbj\|AK073323.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	593	e-166
4	ref\|NM_193872.1\| Oryza sativa (japonica cultivar-group), predic...	513	e-142
5	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	347	3e-92
6	dbj\|AP003204.3\| Oryza sativa (japonica cultivar-group) genomic D...	347	3e-92
7	dbj\|AK063767.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	323	4e-85
8	dbj\|AP008218.1\| Oryza sativa (japonica cultivar-group) genomic D...	52	0.002
9	gb\|DP000011.1\| Oryza sativa (japonica cultivar-group) chromosome...	52	0.002
10	emb\|AL713932.4\|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb...	52	0.002
11	emb\|AL713937.3\|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103...	52	0.002
12	gb\|BT014545.1\| Lycopersicon esculentum clone 133962F, mRNA sequence	48	0.035
13	gb\|AY578144.1\| Nicotiana tabacum 3-dehydroquinate dehydratase / ...	48	0.035
14	gb\|AF034411.1\|AF034411 Lycopersicon esculentum cytosolic Cu,Zn s...	48	0.035
15	gb\|L32794.1\|TOBDDSD Nicotiana tabacum (clone: SP-3) dehydroquina...	48	0.035
16	dbj\|AK116697.1\| Ciona intestinalis cDNA, clone:cieg034a16, full ...	46	0.14
17	gb\|AC161352.7\| Mus musculus chromosome 3, clone RP23-129N8, comp...	44	0.55
18	gb\|AC133457.6\| Mus musculus chromosome 3, clone RP24-493E2, comp...	44	0.55
19	gb\|AC108710.3\| Homo sapiens 3p BAC RP11-88I7 (Roswell Park Cance...	42	2.2
20	ref\|XM_938899.1\| PREDICTED: Homo sapiens similar to Mitochondria...	42	2.2
21	ref\|XM_927540.1\| PREDICTED: Homo sapiens similar to Mitochondria...	42	2.2
22	gb\|AC007185.12\|AC007185 Drosophila melanogaster, chromosome 2L, ...	42	2.2
23	gb\|AC002407.1\|AC002407 Human Chromosome X, complete sequence	42	2.2
24	gb\|AE003651.2\| Drosophila melanogaster chromosome 2L, section 60...	42	2.2
25	emb\|AL935118.8\| Mouse DNA sequence from clone RP23-464I16 on chr...	42	2.2
26	gb\|AC165972.4\| Mus musculus BAC clone RP23-87D12 from chromosome...	40	8.5
27	ref\|XM_629997.1\| Dictyostelium discoideum hypothetical protein (...	40	8.5
28	emb\|CR762488.16\| Zebrafish DNA sequence from clone DKEY-266J7 in...	40	8.5
29	gb\|AC114002.4\| Mus musculus BAC clone RP23-165H7 from 12, comple...	40	8.5
30	ref\|XM_793586.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	8.5
31	emb\|AL451073.17\| Human DNA sequence from clone RP11-384A24 on ch...	40	8.5
32	emb\|AL049844.7\|HSJ468K18 Human DNA sequence from clone RP3-468K1...	40	8.5
33	ref\|XM_778696.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	8.5
34	gb\|AC010051.9\| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell ...	40	8.5
35	emb\|BX640477.6\| Zebrafish DNA sequence from clone DKEY-43N16 in ...	40	8.5
36	gb\|AC108211.3\| Homo sapiens BAC clone RP11-511I14 from 4, comple...	40	8.5
37	gb\|AF033194.1\|AF033194 Lycopersicon esculentum dehydroquinate de...	40	8.5
38	gb\|AC155819.2\| Mus musculus BAC clone RP23-402F16 from chromosom...	40	8.5
39	dbj\|AB019231.1\| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	8.5
40	emb\|AL591769.3\|CNS07EGM Human chromosome 14 DNA sequence BAC R-6...	40	8.5
41	gb\|AE003593.2\| Drosophila melanogaster chromosome 3L, section 74...	40	8.5
42	emb\|AL807793.7\| Mouse DNA sequence from clone RP23-33N15 on chro...	40	8.5
43	gb\|AC164983.2\| Mus musculus BAC clone RP23-16J24 from chromosome...	40	8.5

>ref|NM_193870.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1596

 Score =  609 bits (307), Expect = e-171
 Identities = 532/607 (87%)
 Strand = Plus / Plus

                                                                       
Query: 14  atttgaaacactcagtttagctatggaactaggtgtagactatgttgacatcgagttaaa 73
           ||||||| ||||| ||||||| |||||  |||| |||||||||||||| || || || ||
Sbjct: 300 atttgaagcactccgtttagcaatggagttaggcgtagactatgttgatattgaattgaa 359

                                                                       
Query: 74  ggttgctgacaaatttgtcgattttctttctggtactaagccagataagtgtaaacttat 133
           |||||||||||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||
Sbjct: 360 ggttgctgacaaatttatcagctttatttctggcagtaagccagagaagtgtaaacttat 419

                                                                       
Query: 134 tgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaatcttgtagc 193
           ||| || ||||| |||||||||||||| || |||||||||||||||||| ||||||| ||
Sbjct: 420 tgtctcatcacacaattatgaaagtactccgtcctgcgaggagcttgcagatcttgtggc 479

                                                                       
Query: 194 cagaatacaagaagttggagctgacatagttaaagttgcaacaactgctacagacattgt 253
            |||||||||| ||||||| |||||||||| ||| | |||||||||||||  ||||||| 
Sbjct: 480 tagaatacaagcagttggatctgacatagtgaaaatcgcaacaactgctagtgacattgc 539

                                                                       
Query: 254 tgatgtgtcaaggatgtttcaagtgatggtgcactgccaagtgcctatgattggattggt 313
           |||||||||| | ||||| |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 540 tgatgtgtcacgaatgttccaagtgatggtgcactgccaagtgcctatgattggactagt 599

                                                                       
Query: 314 gatgagtgagagaggtttgatgtcaagggtgttatccccaaaatttggtggatatcttac 373
           |||| | || | |||||| |||||||||||||||||||| || ||||| |||||||| ||
Sbjct: 600 gatgggcgaaaaaggtttaatgtcaagggtgttatcccccaagtttggaggatatctaac 659

                                                                       
Query: 374 ctttggaatacttgatgctacaaagacatcagcacctgggcaaccaacacttgaagaatt 433
           |||||| |  |||||||||||||||| ||||||||||||||| |||||  |  ||||| |
Sbjct: 660 ctttgggactcttgatgctacaaagatatcagcacctgggcagccaaccgtcaaagaact 719

                                                                       
Query: 434 attggacatttacaatataaggtgtataggacctgatacaaaagttcttggtcttatagc 493
            ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| ||
Sbjct: 720 gttggacatttataatataaggcgtataggacctgatacaaaggttcttggtcttattgc 779

                                                                       
Query: 494 caacccagtaaagcaaagcaagagcccaattttgcacaataaatgtctacagtctgttgg 553
           |||||||||||| || |||||||||||||||||||||||||||||||| || ||| ||||
Sbjct: 780 caacccagtaaaacagagcaagagcccaattttgcacaataaatgtcttcaatctattgg 839

                                                                       
Query: 554 atacaatgctgtttatcttccacttctggcagacgatcttgctagatttcttgacacata 613
           ||||||||||||||||||||||||| ||||||| || |||||| |||||||   ||||||
Sbjct: 840 atacaatgctgtttatcttccacttttggcagatgaccttgctcgatttctcagcacata 899

                  
Query: 614 ttcatct 620
           |||||||
Sbjct: 900 ttcatct 906

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>dbj|AK121501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022B16, full
            insert sequence
          Length = 1943

 Score =  609 bits (307), Expect = e-171
 Identities = 532/607 (87%)
 Strand = Plus / Plus

                                                                        
Query: 14   atttgaaacactcagtttagctatggaactaggtgtagactatgttgacatcgagttaaa 73
            ||||||| ||||| ||||||| |||||  |||| |||||||||||||| || || || ||
Sbjct: 425  atttgaagcactccgtttagcaatggagttaggcgtagactatgttgatattgaattgaa 484

                                                                        
Query: 74   ggttgctgacaaatttgtcgattttctttctggtactaagccagataagtgtaaacttat 133
            |||||||||||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||
Sbjct: 485  ggttgctgacaaatttatcagctttatttctggcagtaagccagagaagtgtaaacttat 544

                                                                        
Query: 134  tgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaatcttgtagc 193
            ||| || ||||| |||||||||||||| || |||||||||||||||||| ||||||| ||
Sbjct: 545  tgtctcatcacacaattatgaaagtactccgtcctgcgaggagcttgcagatcttgtggc 604

                                                                        
Query: 194  cagaatacaagaagttggagctgacatagttaaagttgcaacaactgctacagacattgt 253
             |||||||||| ||||||| |||||||||| ||| | |||||||||||||  ||||||| 
Sbjct: 605  tagaatacaagcagttggatctgacatagtgaaaatcgcaacaactgctagtgacattgc 664

                                                                        
Query: 254  tgatgtgtcaaggatgtttcaagtgatggtgcactgccaagtgcctatgattggattggt 313
            |||||||||| | ||||| |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 665  tgatgtgtcacgaatgttccaagtgatggtgcactgccaagtgcctatgattggactagt 724

                                                                        
Query: 314  gatgagtgagagaggtttgatgtcaagggtgttatccccaaaatttggtggatatcttac 373
            |||| | || | |||||| |||||||||||||||||||| || ||||| |||||||| ||
Sbjct: 725  gatgggcgaaaaaggtttaatgtcaagggtgttatcccccaagtttggaggatatctaac 784

                                                                        
Query: 374  ctttggaatacttgatgctacaaagacatcagcacctgggcaaccaacacttgaagaatt 433
            |||||| |  |||||||||||||||| ||||||||||||||| |||||  |  ||||| |
Sbjct: 785  ctttgggactcttgatgctacaaagatatcagcacctgggcagccaaccgtcaaagaact 844

                                                                        
Query: 434  attggacatttacaatataaggtgtataggacctgatacaaaagttcttggtcttatagc 493
             ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| ||
Sbjct: 845  gttggacatttataatataaggcgtataggacctgatacaaaggttcttggtcttattgc 904

                                                                        
Query: 494  caacccagtaaagcaaagcaagagcccaattttgcacaataaatgtctacagtctgttgg 553
            |||||||||||| || |||||||||||||||||||||||||||||||| || ||| ||||
Sbjct: 905  caacccagtaaaacagagcaagagcccaattttgcacaataaatgtcttcaatctattgg 964

                                                                        
Query: 554  atacaatgctgtttatcttccacttctggcagacgatcttgctagatttcttgacacata 613
            ||||||||||||||||||||||||| ||||||| || |||||| |||||||   ||||||
Sbjct: 965  atacaatgctgtttatcttccacttttggcagatgaccttgctcgatttctcagcacata 1024

                   
Query: 614  ttcatct 620
            |||||||
Sbjct: 1025 ttcatct 1031

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>dbj|AK073323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028O20, full
           insert sequence
          Length = 1803

 Score =  593 bits (299), Expect = e-166
 Identities = 530/607 (87%)
 Strand = Plus / Plus

                                                                       
Query: 14  atttgaaacactcagtttagctatggaactaggtgtagactatgttgacatcgagttaaa 73
           ||||||| ||||| ||||||| |||||  |||| |||||||||||||| || || || ||
Sbjct: 304 atttgaagcactccgtttagcaatggagttaggcgtagactatgttgatattgaattgaa 363

                                                                       
Query: 74  ggttgctgacaaatttgtcgattttctttctggtactaagccagataagtgtaaacttat 133
           |||||||||||||||| ||   ||| ||||||| | ||||||||| ||||||||||||||
Sbjct: 364 ggttgctgacaaatttatcagctttatttctggcagtaagccagagaagtgtaaacttat 423

                                                                       
Query: 134 tgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaatcttgtagc 193
           ||| || ||||| |||||||||||||| || |||||||||||||||||| ||||||| ||
Sbjct: 424 tgtctcatcacacaattatgaaagtactccgtcctgcgaggagcttgcagatcttgtggc 483

                                                                       
Query: 194 cagaatacaagaagttggagctgacatagttaaagttgcaacaactgctacagacattgt 253
            |||||||||| ||||||| ||| |||||| ||| | |||||||||||||  ||||||| 
Sbjct: 484 tagaatacaagcagttggatctggcatagtgaaaatcgcaacaactgctagtgacattgc 543

                                                                       
Query: 254 tgatgtgtcaaggatgtttcaagtgatggtgcactgccaagtgcctatgattggattggt 313
           |||||||||| | ||||| |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 544 tgatgtgtcacgaatgttccaagtgatggtgcactgccaagtgcctatgattggactagt 603

                                                                       
Query: 314 gatgagtgagagaggtttgatgtcaagggtgttatccccaaaatttggtggatatcttac 373
           |||| | || | |||||| |||||||||||||||||||| || ||||| |||||||| ||
Sbjct: 604 gatgggcgaaaaaggtttaatgtcaagggtgttatcccccaagtttggaggatatctaac 663

                                                                       
Query: 374 ctttggaatacttgatgctacaaagacatcagcacctgggcaaccaacacttgaagaatt 433
           |||||| |  |||||||||||||||| ||||||||||||||| |||||  |  ||||| |
Sbjct: 664 ctttgggactcttgatgctacaaagatatcagcacctgggcagccaaccgtcaaagaact 723

                                                                       
Query: 434 attggacatttacaatataaggtgtataggacctgatacaaaagttcttggtcttatagc 493
            ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| ||
Sbjct: 724 gttggacatttataatataaggcgtataggacctgatacaaaggttcttggtcttattgc 783

                                                                       
Query: 494 caacccagtaaagcaaagcaagagcccaattttgcacaataaatgtctacagtctgttgg 553
           |||||||||||| || |||||||||||||||||||||||||||||||| || ||| ||||
Sbjct: 784 caacccagtaaaacagagcaagagcccaattttgcacaataaatgtcttcaatctattgg 843

                                                                       
Query: 554 atacaatgctgtttatcttccacttctggcagacgatcttgctagatttcttgacacata 613
           |||| |||||||||||||||||||| ||||||| || |||||| |||||||   ||||||
Sbjct: 844 atacgatgctgtttatcttccacttttggcagatgaccttgctcgatttctcagcacata 903

                  
Query: 614 ttcatct 620
           |||||||
Sbjct: 904 ttcatct 910

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>ref|NM_193872.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1503

 Score =  513 bits (259), Expect = e-142
 Identities = 517/603 (85%)
 Strand = Plus / Plus

                                                                       
Query: 14  atttgaaacactcagtttagctatggaactaggtgtagactatgttgacatcgagttaaa 73
           ||||||| ||||| ||||||| ||||| ||||| ||| | ||||| || || || || ||
Sbjct: 237 atttgaagcactccgtttagcaatggagctaggagtaaattatgtcgatattgaattgaa 296

                                                                       
Query: 74  ggttgctgacaaatttgtcgattttctttctggtactaagccagataagtgtaaacttat 133
           |||||||||||||||| ||   ||| ||| ||| | ||||||||| ||||| ||||||||
Sbjct: 297 ggttgctgacaaatttatcagctttatttatgggagtaagccagagaagtgcaaacttat 356

                                                                       
Query: 134 tgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaatcttgtagc 193
           ||| ||  ||||||||||||||||||| |||||||| |||||||||||| ||||||| ||
Sbjct: 357 tgtctcggcacataattatgaaagtactccatcctgtgaggagcttgcagatcttgtggc 416

                                                                       
Query: 194 cagaatacaagaagttggagctgacatagttaaagttgcaacaactgctacagacattgt 253
            |||||||||| |||||||||||| ||||| ||| | |||||||| ||||  ||||||||
Sbjct: 417 tagaatacaagcagttggagctgatatagtgaaaatcgcaacaacagctaatgacattgt 476

                                                                       
Query: 254 tgatgtgtcaaggatgtttcaagtgatggtgcactgccaagtgcctatgattggattggt 313
           ||||||||||  |||||| |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 477 tgatgtgtcacagatgttccaagtgatggtgcactgccaagtgcctatgattggactagt 536

                                                                       
Query: 314 gatgagtgagagaggtttgatgtcaagggtgttatccccaaaatttggtggatatcttac 373
            ||| | || | |||||| |||||||||||||||||||| || ||||| |||||||| ||
Sbjct: 537 tatgggcgaaaaaggtttaatgtcaagggtgttatcccccaagtttgggggatatctaac 596

                                                                       
Query: 374 ctttggaatacttgatgctacaaagacatcagcacctgggcaaccaacacttgaagaatt 433
           |||||| |  |||||||||||||||  ||||||||||||||| |||||  | |||||  |
Sbjct: 597 ctttgggagtcttgatgctacaaaggtatcagcacctgggcagccaaccgtcgaagagct 656

                                                                       
Query: 434 attggacatttacaatataaggtgtataggacctgatacaaaagttcttggtcttatagc 493
             | ||||||||  |||||||| | ||||||||||||||||| ||||| ||| |||||||
Sbjct: 657 gatagacatttatgatataaggcgcataggacctgatacaaaggttctcggtgttatagc 716

                                                                       
Query: 494 caacccagtaaagcaaagcaagagcccaattttgcacaataaatgtctacagtctgttgg 553
           |||||||||||| || |||||||||||| |||||||||||| |||||| || ||||||||
Sbjct: 717 caacccagtaaaacagagcaagagcccagttttgcacaatacatgtcttcaatctgttgg 776

                                                                       
Query: 554 atacaatgctgtttatcttccacttctggcagacgatcttgctagatttcttgacacata 613
           ||||||||||||||||||||||||| |||||||| |  ||||||||||||||  ||||||
Sbjct: 777 atacaatgctgtttatcttccacttttggcagacaacattgctagatttcttagcacata 836

              
Query: 614 ttc 616
           |||
Sbjct: 837 ttc 839

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  347 bits (175), Expect = 3e-92
 Identities = 289/327 (88%)
 Strand = Plus / Plus

                                                                            
Query: 294      gtgcctatgattggattggtgatgagtgagagaggtttgatgtcaagggtgttatcccca 353
                ||||||||||||||| | |||||| | || | |||||| |||||||||||||||||||| 
Sbjct: 15469826 gtgcctatgattggactagtgatgggcgaaaaaggtttaatgtcaagggtgttatccccc 15469885

                                                                            
Query: 354      aaatttggtggatatcttacctttggaatacttgatgctacaaagacatcagcacctggg 413
                || ||||| |||||||| |||||||| |  |||||||||||||||| |||||||||||||
Sbjct: 15469886 aagtttggaggatatctaacctttgggactcttgatgctacaaagatatcagcacctggg 15469945

                                                                            
Query: 414      caaccaacacttgaagaattattggacatttacaatataaggtgtataggacctgataca 473
                || |||||  |  ||||| | ||||||||||| ||||||||| |||||||||||||||||
Sbjct: 15469946 cagccaaccgtcaaagaactgttggacatttataatataaggcgtataggacctgataca 15470005

                                                                            
Query: 474      aaagttcttggtcttatagccaacccagtaaagcaaagcaagagcccaattttgcacaat 533
                || |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||
Sbjct: 15470006 aaggttcttggtcttattgccaacccagtaaaacagagcaagagcccaattttgcacaat 15470065

                                                                            
Query: 534      aaatgtctacagtctgttggatacaatgctgtttatcttccacttctggcagacgatctt 593
                |||||||| || ||| ||||||||||||||||||||||||||||| ||||||| || |||
Sbjct: 15470066 aaatgtcttcaatctattggatacaatgctgtttatcttccacttttggcagatgacctt 15470125

                                           
Query: 594      gctagatttcttgacacatattcatct 620
                ||| |||||||   |||||||||||||
Sbjct: 15470126 gctcgatttctcagcacatattcatct 15470152



 Score =  283 bits (143), Expect = 3e-73
 Identities = 278/323 (86%)
 Strand = Plus / Plus

                                                                            
Query: 294      gtgcctatgattggattggtgatgagtgagagaggtttgatgtcaagggtgttatcccca 353
                ||||||||||||||| | || ||| | || | |||||| |||||||||||||||||||| 
Sbjct: 15490199 gtgcctatgattggactagttatgggcgaaaaaggtttaatgtcaagggtgttatccccc 15490258

                                                                            
Query: 354      aaatttggtggatatcttacctttggaatacttgatgctacaaagacatcagcacctggg 413
                || ||||| |||||||| |||||||| |  |||||||||||||||  |||||||||||||
Sbjct: 15490259 aagtttgggggatatctaacctttgggagtcttgatgctacaaaggtatcagcacctggg 15490318

                                                                            
Query: 414      caaccaacacttgaagaattattggacatttacaatataaggtgtataggacctgataca 473
                || |||||  | |||||  |  | ||||||||  |||||||| | |||||||||||||||
Sbjct: 15490319 cagccaaccgtcgaagagctgatagacatttatgatataaggcgcataggacctgataca 15490378

                                                                            
Query: 474      aaagttcttggtcttatagccaacccagtaaagcaaagcaagagcccaattttgcacaat 533
                || ||||| ||| ||||||||||||||||||| || |||||||||||| |||||||||||
Sbjct: 15490379 aaggttctcggtgttatagccaacccagtaaaacagagcaagagcccagttttgcacaat 15490438

                                                                            
Query: 534      aaatgtctacagtctgttggatacaatgctgtttatcttccacttctggcagacgatctt 593
                | |||||| || ||||||||||||||||||||||||||||||||| |||||||| |  ||
Sbjct: 15490439 acatgtcttcaatctgttggatacaatgctgtttatcttccacttttggcagacaacatt 15490498

                                       
Query: 594      gctagatttcttgacacatattc 616
                ||||||||||||  |||||||||
Sbjct: 15490499 gctagatttcttagcacatattc 15490521



 Score =  228 bits (115), Expect = 2e-56
 Identities = 196/223 (87%)
 Strand = Plus / Plus

                                                                            
Query: 73       aggttgctgacaaatttgtcgattttctttctggtactaagccagataagtgtaaactta 132
                ||||||||||||||||| ||   ||| ||||||| | ||||||||| |||||||||||||
Sbjct: 15468587 aggttgctgacaaatttatcagctttatttctggcagtaagccagagaagtgtaaactta 15468646

                                                                            
Query: 133      ttgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaatcttgtag 192
                |||| || ||||| |||||||||||||| || |||||||||||||||||| ||||||| |
Sbjct: 15468647 ttgtctcatcacacaattatgaaagtactccgtcctgcgaggagcttgcagatcttgtgg 15468706

                                                                            
Query: 193      ccagaatacaagaagttggagctgacatagttaaagttgcaacaactgctacagacattg 252
                | |||||||||| ||||||| |||||||||| ||| | |||||||||||||  |||||||
Sbjct: 15468707 ctagaatacaagcagttggatctgacatagtgaaaatcgcaacaactgctagtgacattg 15468766

                                                           
Query: 253      ttgatgtgtcaaggatgtttcaagtgatggtgcactgccaagt 295
                 |||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 15468767 ctgatgtgtcacgaatgttccaagtgatggtgcactgccaagt 15468809



 Score =  212 bits (107), Expect = 1e-51
 Identities = 194/223 (86%)
 Strand = Plus / Plus

                                                                            
Query: 73       aggttgctgacaaatttgtcgattttctttctggtactaagccagataagtgtaaactta 132
                ||||||||||||||||| ||   ||| ||| ||| | ||||||||| ||||| |||||||
Sbjct: 15486608 aggttgctgacaaatttatcagctttatttatgggagtaagccagagaagtgcaaactta 15486667

                                                                            
Query: 133      ttgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaatcttgtag 192
                |||| ||  ||||||||||||||||||| |||||||| |||||||||||| ||||||| |
Sbjct: 15486668 ttgtctcggcacataattatgaaagtactccatcctgtgaggagcttgcagatcttgtgg 15486727

                                                                            
Query: 193      ccagaatacaagaagttggagctgacatagttaaagttgcaacaactgctacagacattg 252
                | |||||||||| |||||||||||| ||||| ||| | |||||||| ||||  |||||||
Sbjct: 15486728 ctagaatacaagcagttggagctgatatagtgaaaatcgcaacaacagctaatgacattg 15486787

                                                           
Query: 253      ttgatgtgtcaaggatgtttcaagtgatggtgcactgccaagt 295
                |||||||||||  |||||| |||||||||||||||||||||||
Sbjct: 15486788 ttgatgtgtcacagatgttccaagtgatggtgcactgccaagt 15486830



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                                
Query: 14       atttgaaacactcagtttagctatggaactaggtgtagactatgttga 61
                ||||||| ||||| ||||||| |||||  |||| ||||||||||||||
Sbjct: 15467361 atttgaagcactccgtttagcaatggagttaggcgtagactatgttga 15467408

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>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1111C09
          Length = 156393

 Score =  347 bits (175), Expect = 3e-92
 Identities = 289/327 (88%)
 Strand = Plus / Plus

                                                                         
Query: 294   gtgcctatgattggattggtgatgagtgagagaggtttgatgtcaagggtgttatcccca 353
             ||||||||||||||| | |||||| | || | |||||| |||||||||||||||||||| 
Sbjct: 27335 gtgcctatgattggactagtgatgggcgaaaaaggtttaatgtcaagggtgttatccccc 27394

                                                                         
Query: 354   aaatttggtggatatcttacctttggaatacttgatgctacaaagacatcagcacctggg 413
             || ||||| |||||||| |||||||| |  |||||||||||||||| |||||||||||||
Sbjct: 27395 aagtttggaggatatctaacctttgggactcttgatgctacaaagatatcagcacctggg 27454

                                                                         
Query: 414   caaccaacacttgaagaattattggacatttacaatataaggtgtataggacctgataca 473
             || |||||  |  ||||| | ||||||||||| ||||||||| |||||||||||||||||
Sbjct: 27455 cagccaaccgtcaaagaactgttggacatttataatataaggcgtataggacctgataca 27514

                                                                         
Query: 474   aaagttcttggtcttatagccaacccagtaaagcaaagcaagagcccaattttgcacaat 533
             || |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||
Sbjct: 27515 aaggttcttggtcttattgccaacccagtaaaacagagcaagagcccaattttgcacaat 27574

                                                                         
Query: 534   aaatgtctacagtctgttggatacaatgctgtttatcttccacttctggcagacgatctt 593
             |||||||| || ||| ||||||||||||||||||||||||||||| ||||||| || |||
Sbjct: 27575 aaatgtcttcaatctattggatacaatgctgtttatcttccacttttggcagatgacctt 27634

                                        
Query: 594   gctagatttcttgacacatattcatct 620
             ||| |||||||   |||||||||||||
Sbjct: 27635 gctcgatttctcagcacatattcatct 27661



 Score =  283 bits (143), Expect = 3e-73
 Identities = 278/323 (86%)
 Strand = Plus / Plus

                                                                         
Query: 294   gtgcctatgattggattggtgatgagtgagagaggtttgatgtcaagggtgttatcccca 353
             ||||||||||||||| | || ||| | || | |||||| |||||||||||||||||||| 
Sbjct: 47708 gtgcctatgattggactagttatgggcgaaaaaggtttaatgtcaagggtgttatccccc 47767

                                                                         
Query: 354   aaatttggtggatatcttacctttggaatacttgatgctacaaagacatcagcacctggg 413
             || ||||| |||||||| |||||||| |  |||||||||||||||  |||||||||||||
Sbjct: 47768 aagtttgggggatatctaacctttgggagtcttgatgctacaaaggtatcagcacctggg 47827

                                                                         
Query: 414   caaccaacacttgaagaattattggacatttacaatataaggtgtataggacctgataca 473
             || |||||  | |||||  |  | ||||||||  |||||||| | |||||||||||||||
Sbjct: 47828 cagccaaccgtcgaagagctgatagacatttatgatataaggcgcataggacctgataca 47887

                                                                         
Query: 474   aaagttcttggtcttatagccaacccagtaaagcaaagcaagagcccaattttgcacaat 533
             || ||||| ||| ||||||||||||||||||| || |||||||||||| |||||||||||
Sbjct: 47888 aaggttctcggtgttatagccaacccagtaaaacagagcaagagcccagttttgcacaat 47947

                                                                         
Query: 534   aaatgtctacagtctgttggatacaatgctgtttatcttccacttctggcagacgatctt 593
             | |||||| || ||||||||||||||||||||||||||||||||| |||||||| |  ||
Sbjct: 47948 acatgtcttcaatctgttggatacaatgctgtttatcttccacttttggcagacaacatt 48007

                                    
Query: 594   gctagatttcttgacacatattc 616
             ||||||||||||  |||||||||
Sbjct: 48008 gctagatttcttagcacatattc 48030



 Score =  228 bits (115), Expect = 2e-56
 Identities = 196/223 (87%)
 Strand = Plus / Plus

                                                                         
Query: 73    aggttgctgacaaatttgtcgattttctttctggtactaagccagataagtgtaaactta 132
             ||||||||||||||||| ||   ||| ||||||| | ||||||||| |||||||||||||
Sbjct: 26096 aggttgctgacaaatttatcagctttatttctggcagtaagccagagaagtgtaaactta 26155

                                                                         
Query: 133   ttgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaatcttgtag 192
             |||| || ||||| |||||||||||||| || |||||||||||||||||| ||||||| |
Sbjct: 26156 ttgtctcatcacacaattatgaaagtactccgtcctgcgaggagcttgcagatcttgtgg 26215

                                                                         
Query: 193   ccagaatacaagaagttggagctgacatagttaaagttgcaacaactgctacagacattg 252
             | |||||||||| ||||||| |||||||||| ||| | |||||||||||||  |||||||
Sbjct: 26216 ctagaatacaagcagttggatctgacatagtgaaaatcgcaacaactgctagtgacattg 26275

                                                        
Query: 253   ttgatgtgtcaaggatgtttcaagtgatggtgcactgccaagt 295
              |||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 26276 ctgatgtgtcacgaatgttccaagtgatggtgcactgccaagt 26318



 Score =  212 bits (107), Expect = 1e-51
 Identities = 194/223 (86%)
 Strand = Plus / Plus

                                                                         
Query: 73    aggttgctgacaaatttgtcgattttctttctggtactaagccagataagtgtaaactta 132
             ||||||||||||||||| ||   ||| ||| ||| | ||||||||| ||||| |||||||
Sbjct: 44117 aggttgctgacaaatttatcagctttatttatgggagtaagccagagaagtgcaaactta 44176

                                                                         
Query: 133   ttgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaatcttgtag 192
             |||| ||  ||||||||||||||||||| |||||||| |||||||||||| ||||||| |
Sbjct: 44177 ttgtctcggcacataattatgaaagtactccatcctgtgaggagcttgcagatcttgtgg 44236

                                                                         
Query: 193   ccagaatacaagaagttggagctgacatagttaaagttgcaacaactgctacagacattg 252
             | |||||||||| |||||||||||| ||||| ||| | |||||||| ||||  |||||||
Sbjct: 44237 ctagaatacaagcagttggagctgatatagtgaaaatcgcaacaacagctaatgacattg 44296

                                                        
Query: 253   ttgatgtgtcaaggatgtttcaagtgatggtgcactgccaagt 295
             |||||||||||  |||||| |||||||||||||||||||||||
Sbjct: 44297 ttgatgtgtcacagatgttccaagtgatggtgcactgccaagt 44339



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 14    atttgaaacactcagtttagctatggaactaggtgtagactatgttga 61
             ||||||| ||||| ||||||| |||||  |||| ||||||||||||||
Sbjct: 24870 atttgaagcactccgtttagcaatggagttaggcgtagactatgttga 24917

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>dbj|AK063767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B08, full
           insert sequence
          Length = 1323

 Score =  323 bits (163), Expect = 4e-85
 Identities = 263/295 (89%), Gaps = 1/295 (0%)
 Strand = Plus / Plus

                                                                       
Query: 326 aggtttgatgtcaagggtgttatccccaaaatttggtggatatcttacctttggaatact 385
           |||||| |||||||||||||||||||| || ||||| |||||||| ||||||||| | ||
Sbjct: 15  aggtttaatgtcaagggtgttatcccccaagtttggaggatatctaacctttggact-ct 73

                                                                       
Query: 386 tgatgctacaaagacatcagcacctgggcaaccaacacttgaagaattattggacattta 445
           |||||||||||||| ||||||||||||||| |||||  |  ||||| | |||||||||||
Sbjct: 74  tgatgctacaaagatatcagcacctgggcagccaaccgtcaaagaactgttggacattta 133

                                                                       
Query: 446 caatataaggtgtataggacctgatacaaaagttcttggtcttatagccaacccagtaaa 505
            ||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 134 taatataaggcgtataggacctgatacaaaggttcttggtcttattgccaacccagtaaa 193

                                                                       
Query: 506 gcaaagcaagagcccaattttgcacaataaatgtctacagtctgttggatacaatgctgt 565
            || |||||||||||||||||||||||||||||||  || ||| ||||||||||||||||
Sbjct: 194 acagagcaagagcccaattttgcacaataaatgtcctcaatctattggatacaatgctgt 253

                                                                  
Query: 566 ttatcttccacttctggcagacgatcttgctagatttcttgacacatattcatct 620
           ||||||||||||| ||||||| || |||||| |||||||   |||||||||||||
Sbjct: 254 ttatcttccacttttggcagatgaccttgctcgatttctcagcacatattcatct 308

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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                            
Query: 210      ggagctgacatagttaaagttgcaacaactgctacagacattgttgatgtgtcaaggatg 269
                |||||||||||||| ||| ||||||| || || || || |||||||||||| |||  |||
Sbjct: 21269842 ggagctgacatagtgaaaattgcaaccaccgccaccgaaattgttgatgtggcaaaaatg 21269783

                      
Query: 270      tttcaa 275
                ||||||
Sbjct: 21269782 tttcaa 21269777

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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                            
Query: 210      ggagctgacatagttaaagttgcaacaactgctacagacattgttgatgtgtcaaggatg 269
                |||||||||||||| ||| ||||||| || || || || |||||||||||| |||  |||
Sbjct: 21196051 ggagctgacatagtgaaaattgcaaccaccgccaccgaaattgttgatgtggcaaaaatg 21195992

                      
Query: 270      tttcaa 275
                ||||||
Sbjct: 21195991 tttcaa 21195986

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>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137571

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 210   ggagctgacatagttaaagttgcaacaactgctacagacattgttgatgtgtcaaggatg 269
             |||||||||||||| ||| ||||||| || || || || |||||||||||| |||  |||
Sbjct: 20358 ggagctgacatagtgaaaattgcaaccaccgccaccgaaattgttgatgtggcaaaaatg 20417

                   
Query: 270   tttcaa 275
             ||||||
Sbjct: 20418 tttcaa 20423

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>emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103_B10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 95132

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 210   ggagctgacatagttaaagttgcaacaactgctacagacattgttgatgtgtcaaggatg 269
             |||||||||||||| ||| ||||||| || || || || |||||||||||| |||  |||
Sbjct: 91436 ggagctgacatagtgaaaattgcaaccaccgccaccgaaattgttgatgtggcaaaaatg 91495

                   
Query: 270   tttcaa 275
             ||||||
Sbjct: 91496 tttcaa 91501

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>gb|BT014545.1| Lycopersicon esculentum clone 133962F, mRNA sequence
          Length = 1974

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                       
Query: 126 aaacttattgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaat 185
           ||||||||||||||||| || || |||||||| || || ||    ||||| ||||  |||
Sbjct: 471 aaacttattgtttcttctcacaactatgaaagcacaccgtcagctgaggatcttggcaat 530

                                                                   
Query: 186 cttgtagccagaatacaagaagttggagctgacatagttaaagttgcaacaactgc 241
           || ||||| |||||||| | |  |||||||||||| || ||| |||| ||||||||
Sbjct: 531 ctagtagcaagaatacaggcatctggagctgacattgtgaaatttgctacaactgc 586

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>gb|AY578144.1| Nicotiana tabacum 3-dehydroquinate dehydratase / shikimate
           dehydrogenase isoform 1 mRNA, complete cds
          Length = 2062

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                       
Query: 130 ttattgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaatcttg 189
           ||||||||||||| || || ||||| | ||| ||||| |  |||||||| |  ||||| |
Sbjct: 488 ttattgtttcttctcacaactatgataatacaccatcatctgaggagctcggcaatctag 547

                                                               
Query: 190 tagccagaatacaagaagttggagctgacatagttaaagttgcaacaactgc 241
           |||| |||||||| | |  |||||||||||| || ||  |||||||||||||
Sbjct: 548 tagcaagaatacaggcatctggagctgacattgtgaagtttgcaacaactgc 599

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>gb|AF034411.1|AF034411 Lycopersicon esculentum cytosolic Cu,Zn superoxide dismutase (Sod)
            gene, partial cds; and dehydroquinate
            dehydratase/shikimate:NADP oxidoreductase gene, complete
            cds
          Length = 20445

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                        
Query: 126  aaacttattgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaat 185
            ||||||||||||||||| || || |||||||| || || ||    ||||| ||||  |||
Sbjct: 8571 aaacttattgtttcttctcacaactatgaaagcacaccgtcagctgaggatcttggcaat 8630

                                                                    
Query: 186  cttgtagccagaatacaagaagttggagctgacatagttaaagttgcaacaactgc 241
            || ||||| |||||||| | |  |||||||||||| || ||| |||| ||||||||
Sbjct: 8631 ctagtagcaagaatacaggcatctggagctgacattgtgaaatttgctacaactgc 8686

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>gb|L32794.1|TOBDDSD Nicotiana tabacum (clone: SP-3) dehydroquinate
           dehydratase/shikimate dehydrogenase (aroD-E) mRNA, 3'
           end
          Length = 2014

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                       
Query: 130 ttattgtttcttcacataattatgaaagtaccccatcctgcgaggagcttgcaaatcttg 189
           ||||||||||||| || || ||||| | ||| ||||| |  |||||||| |  ||||| |
Sbjct: 440 ttattgtttcttctcacaactatgataatacaccatcatctgaggagctcggcaatctag 499

                                                               
Query: 190 tagccagaatacaagaagttggagctgacatagttaaagttgcaacaactgc 241
           |||| |||||||| | |  |||||||||||| || ||  |||||||||||||
Sbjct: 500 tagcaagaatacaggcatctggagctgacattgtgaagtttgcaacaactgc 551

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>dbj|AK116697.1| Ciona intestinalis cDNA, clone:cieg034a16, full insert sequence
          Length = 2305

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 82   acaaatttgtcgattttctttct 104
            |||||||||||||||||||||||
Sbjct: 1434 acaaatttgtcgattttctttct 1456

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>gb|AC161352.7| Mus musculus chromosome 3, clone RP23-129N8, complete sequence
          Length = 192165

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 120   aagtgtaaacttattgtttctt 141
             ||||||||||||||||||||||
Sbjct: 70099 aagtgtaaacttattgtttctt 70120

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>gb|AC133457.6| Mus musculus chromosome 3, clone RP24-493E2, complete sequence
          Length = 169824

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 120    aagtgtaaacttattgtttctt 141
              ||||||||||||||||||||||
Sbjct: 168651 aagtgtaaacttattgtttctt 168672

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>gb|AC108710.3| Homo sapiens 3p BAC RP11-88I7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186799

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 321    gagagaggtttgatgtcaagg 341
              |||||||||||||||||||||
Sbjct: 178659 gagagaggtttgatgtcaagg 178639

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>ref|XM_938899.1| PREDICTED: Homo sapiens similar to Mitochondrial import inner
           membrane translocase subunit TIM8 B (Deafness dystonia
           protein 2) (DDP-like protein) (LOC649837), mRNA
          Length = 477

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 419 aacacttgaagaattattgga 439
           |||||||||||||||||||||
Sbjct: 20  aacacttgaagaattattgga 40

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>ref|XM_927540.1| PREDICTED: Homo sapiens similar to Mitochondrial import inner
           membrane translocase subunit TIM8 B (Deafness dystonia
           protein 2) (DDP-like protein) (LOC644394), mRNA
          Length = 477

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 419 aacacttgaagaattattgga 439
           |||||||||||||||||||||
Sbjct: 20  aacacttgaagaattattgga 40

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>gb|AC007185.12|AC007185 Drosophila melanogaster, chromosome 2L, region 36A-, BAC clone
             BACR44N04, complete sequence
          Length = 190651

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 309   ttggtgatgagtgagagaggt 329
             |||||||||||||||||||||
Sbjct: 64131 ttggtgatgagtgagagaggt 64111

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>gb|AC002407.1|AC002407 Human Chromosome X, complete sequence
          Length = 95506

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 419   aacacttgaagaattattgga 439
             |||||||||||||||||||||
Sbjct: 53235 aacacttgaagaattattgga 53255

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>gb|AE003651.2| Drosophila melanogaster chromosome 2L, section 60 of 83 of the complete
              sequence
          Length = 254646

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 309    ttggtgatgagtgagagaggt 329
              |||||||||||||||||||||
Sbjct: 160508 ttggtgatgagtgagagaggt 160488

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>emb|AL935118.8| Mouse DNA sequence from clone RP23-464I16 on chromosome 2, complete
             sequence
          Length = 83723

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 426   gaagaattattggacattt-acaatataa 453
             ||||||||||||||||||| |||||||||
Sbjct: 44181 gaagaattattggacatttcacaatataa 44153

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>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 308   attggtgatgagtgagagaggttt 331
             ||||||||||||||||| ||||||
Sbjct: 10428 attggtgatgagtgagaaaggttt 10405

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>ref|XM_629997.1| Dictyostelium discoideum hypothetical protein (DDB0184025), partial
            mRNA
          Length = 6369

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 93   gattttctttctggtactaa 112
            ||||||||||||||||||||
Sbjct: 2843 gattttctttctggtactaa 2824

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>emb|CR762488.16| Zebrafish DNA sequence from clone DKEY-266J7 in linkage group 18,
             complete sequence
          Length = 154489

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   gattggattggtgatgagtg 321
             ||||||||||||||||||||
Sbjct: 59391 gattggattggtgatgagtg 59372

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>gb|AC114002.4| Mus musculus BAC clone RP23-165H7 from 12, complete sequence
          Length = 200112

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 223    ttaaagttgcaacaactgctacagacat 250
              |||||||||||| |||| ||||||||||
Sbjct: 113474 ttaaagttgcaagaacttctacagacat 113447

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>ref|XM_793586.1| PREDICTED: Strongylocentrotus purpuratus similar to CG18437-PA
            (LOC594137), partial mRNA
          Length = 1404

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 302  gattggattggtgatgagtg 321
            ||||||||||||||||||||
Sbjct: 1033 gattggattggtgatgagtg 1014

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>emb|AL451073.17| Human DNA sequence from clone RP11-384A24 on chromosome 6 Contains part
             of the PTPRK gene for protein tyrosine phosphatase
             receptor type K (R-PTP-KAPPA), complete sequence
          Length = 121208

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   attgtttcttcacataatta 151
             ||||||||||||||||||||
Sbjct: 57170 attgtttcttcacataatta 57189

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>emb|AL049844.7|HSJ468K18 Human DNA sequence from clone RP3-468K18 on chromosome 6q24.1-24.3
             Contains part of the gene for a novel protein (contains
             KIAA0680), the gene for a novel protein (similar to
             nucleolin) (contains FLJ14909), the gene for a novel
             protein similar to a  hypothetical mouse protein, and part
             of the PLAGL1 gene for pleiomorphic adenoma gene-like 1
             (PLAG-like 1, LOT1, ZAC, ZAC tumor suppressor). Contains a
             CpG island, complete sequence
          Length = 137387

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   ctgctacagacattgttgat 257
             ||||||||||||||||||||
Sbjct: 64466 ctgctacagacattgttgat 64447

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>ref|XM_778696.1| PREDICTED: Strongylocentrotus purpuratus similar to CG18437-PA
           (LOC578533), mRNA
          Length = 3945

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 302 gattggattggtgatgagtg 321
           ||||||||||||||||||||
Sbjct: 976 gattggattggtgatgagtg 957

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>gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184424

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 433   tattggacatttacaatata 452
             ||||||||||||||||||||
Sbjct: 29684 tattggacatttacaatata 29665

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>emb|BX640477.6| Zebrafish DNA sequence from clone DKEY-43N16 in linkage group 10,
             complete sequence
          Length = 258048

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    aaaggttgctgacaaatttg 90
             ||||||||||||||||||||
Sbjct: 90070 aaaggttgctgacaaatttg 90051

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>gb|AC108211.3| Homo sapiens BAC clone RP11-511I14 from 4, complete sequence
          Length = 222457

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    caaccaacacttgaagaatt 433
              ||||||||||||||||||||
Sbjct: 158508 caaccaacacttgaagaatt 158527

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>gb|AF033194.1|AF033194 Lycopersicon esculentum dehydroquinate dehydratase/shikimate:NADP
           oxidoreductase mRNA, complete cds
          Length = 2195

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 126 aaacttattgtttcttcacataattatgaaag 157
           ||||||||||||||||| || || ||||||||
Sbjct: 542 aaacttattgtttcttctcacaactatgaaag 573

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>gb|AC155819.2| Mus musculus BAC clone RP23-402F16 from chromosome 12, complete sequence
          Length = 201181

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 223    ttaaagttgcaacaactgctacagacat 250
              |||||||||||| |||| ||||||||||
Sbjct: 183307 ttaaagttgcaagaacttctacagacat 183334

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>dbj|AB019231.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGO3
          Length = 43570

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 385  ttgatgctacaaagacatca 404
            ||||||||||||||||||||
Sbjct: 3870 ttgatgctacaaagacatca 3851

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>emb|AL591769.3|CNS07EGM Human chromosome 14 DNA sequence BAC R-600G2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172856

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   ttcaagtgatggtgcactgc 290
             ||||||||||||||||||||
Sbjct: 74726 ttcaagtgatggtgcactgc 74745

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>gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74 of 83 of the complete
              sequence
          Length = 313157

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 433    tattggacatttacaatata 452
              ||||||||||||||||||||
Sbjct: 118997 tattggacatttacaatata 119016

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>emb|AL807793.7| Mouse DNA sequence from clone RP23-33N15 on chromosome 2, complete
              sequence
          Length = 221903

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 554    atacaatgctgtttatcttc 573
              ||||||||||||||||||||
Sbjct: 167375 atacaatgctgtttatcttc 167394

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>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence
          Length = 224370

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 308   attggtgatgagtgagagaggttt 331
             ||||||||||||||||| ||||||
Sbjct: 78520 attggtgatgagtgagaaaggttt 78497


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,071,848
Number of Sequences: 3902068
Number of extensions: 6071848
Number of successful extensions: 113186
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 112958
Number of HSP's gapped (non-prelim): 223
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result