ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26e01 |
|---|---|
| Clone Library Name | barley_pub |
>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 1998 Score = 35.8 bits (81), Expect = 0.11 Identities = 29/120 (24%), Positives = 50/120 (41%) Frame = +3 Query: 219 QDNIEILDMSDGYHGNKDSVLEMSDKGEAFSLQTNFISTEQFLTSSDILESGILNSVLHN 398 Q++ E++++ +G + + EA E+ SSDI L+S Sbjct: 1205 QESEELVEVKEGLVEERKEEMHTEADEEA--------EEEEDAASSDIRAMSPLDS---- 1252 Query: 399 GNVEDATCLEPNLEKQDEALRGKPRESQTKSSEMQAPSLAHVSDLHKETELNNAGDAHDE 578 N DA EP E+++E PR+S+ + E++ ++ E N DA DE Sbjct: 1253 SNSPDADPKEPEAEEEEEKPLDDPRQSEEEPQELEEQEQEEEDEVTAEANQNEDHDADDE 1312
>MYST3_MOUSE (Q8BZ21) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 2003 Score = 35.4 bits (80), Expect = 0.14 Identities = 33/120 (27%), Positives = 52/120 (43%) Frame = +3 Query: 219 QDNIEILDMSDGYHGNKDSVLEMSDKGEAFSLQTNFISTEQFLTSSDILESGILNSVLHN 398 Q+N EI+++ K+ +LE K E + E+ TSSDI L+S Sbjct: 1206 QENEEIVEV-------KEDLLE-ERKEEMHTEPDEEAEEEEDTTSSDIRAMSPLDS---- 1253 Query: 399 GNVEDATCLEPNLEKQDEALRGKPRESQTKSSEMQAPSLAHVSDLHKETELNNAGDAHDE 578 N +A EP E++DE R+S+ + E++ ++ E N DA DE Sbjct: 1254 SNSPEAEPKEPEPEEEDEKPSDDQRQSEEEPQELEEQEQEEEDEVTTEANQNEDHDADDE 1313
>PCP1_SCHPO (Q92351) Spindle pole body protein pcp1| Length = 1208 Score = 32.0 bits (71), Expect = 1.6 Identities = 29/138 (21%), Positives = 62/138 (44%) Frame = +3 Query: 144 DLNAKTLSFEDCPDSSELSNRHELGQDNIEILDMSDGYHGNKDSVLEMSDKGEAFSLQTN 323 D N ++ F+D +S +S LG+ + + +D Y + S L + L+ Sbjct: 5 DFNTQSPKFKDENANSVISQSDFLGKS---LKNNNDDYSDFRGSYLNDKSSFQT-PLRNG 60 Query: 324 FISTEQFLTSSDILESGILNSVLHNGNVEDATCLEPNLEKQDEALRGKPRESQTKSSEMQ 503 + L + +L+S NS +NG++ D +PN + +E+ + S Sbjct: 61 SYQPKGSLEFTPLLQSSNKNSDKYNGSLGDKGSFDPNSYGLSAISKQATQEALSISQGND 120 Query: 504 APSLAHVSDLHKETELNN 557 + ++ ++DL K +E+++ Sbjct: 121 SYDVSKLTDLSKNSEIDH 138
>ARP6_CANAL (Q5AP59) Actin-like protein ARP6| Length = 446 Score = 31.6 bits (70), Expect = 2.1 Identities = 31/124 (25%), Positives = 52/124 (41%) Frame = -1 Query: 382 FRIPDSKISDEVRNCSVLMKFVCNENASPLSDISNTESLLP*YPSDISNISMLSWPNSCL 203 F +PD K++ + FV NEN+ + N +L Y + P + Sbjct: 266 FVLPDFKLT--------ITGFVKNENSMSSQKLPNDTQVLKLYDERFTVPETYFHPE-II 316 Query: 202 FDNSEESGQSSKLNVLAFKSPGPRTLFSWMISLIISRTI*YDPPTSLCVRLTEGNFPLFE 23 FDN+ + SS LN FK+ + S M I++ + ++C+ N P F+ Sbjct: 317 FDNNRTTASSSLLNNAPFKNLTDLIVESIMACPSITQPL---LSANICLSGGSTNIPNFK 373 Query: 22 TRYV 11 TR + Sbjct: 374 TRLI 377
>PROS_DROME (P29617) Protein prospero| Length = 1403 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/64 (26%), Positives = 32/64 (50%) Frame = +3 Query: 360 ILESGILNSVLHNGNVEDATCLEPNLEKQDEALRGKPRESQTKSSEMQAPSLAHVSDLHK 539 +L +L + H G+ + TCL ++ QD R+S+ S++MQ +A +K Sbjct: 1168 MLHPALLAAAHHGGSPDYKTCLRAVMDAQD-------RQSECNSADMQFDGMAPTISFYK 1220 Query: 540 ETEL 551 + +L Sbjct: 1221 QMQL 1224
>PODXL_RAT (Q9WTQ2) Podocalyxin precursor| Length = 485 Score = 31.2 bits (69), Expect = 2.7 Identities = 21/78 (26%), Positives = 37/78 (47%) Frame = +3 Query: 396 NGNVEDATCLEPNLEKQDEALRGKPRESQTKSSEMQAPSLAHVSDLHKETELNNAGDAHD 575 NGN D + + + QD+ +P + KSS +Q P+ +S + + + ++ Sbjct: 27 NGNKTDTSDITSIDQNQDKPATNQPSNATPKSS-VQPPTPTSISTSSPDPKATQSSNSSV 85 Query: 576 ETTSSITDEVTLSSEPSV 629 TTS T + T SS +V Sbjct: 86 TTTSDSTTDRTSSSTSTV 103
>CLMN_MOUSE (Q8C5W0) Calmin| Length = 1052 Score = 30.8 bits (68), Expect = 3.5 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 6/79 (7%) Frame = +3 Query: 408 EDATCLEPNLEKQDEALRGKPRESQTKSSEMQAPSLAHVSDLHKETE------LNNAGDA 569 +DA+C + D G P+ ++ S + SLA VS K++E L A D Sbjct: 434 KDASCSKDPFYSSDFRFEGSPKATKELSKQDGHVSLAEVSKEKKKSEQEARLVLEAASDK 493 Query: 570 HDETTSSITDEVTLSSEPS 626 E+T D V ++PS Sbjct: 494 VPESTVDGLDAVPQDAQPS 512
>SWR1_CRYNE (Q5K8T2) Helicase SWR1 (EC 3.6.1.-)| Length = 1246 Score = 30.8 bits (68), Expect = 3.5 Identities = 22/59 (37%), Positives = 35/59 (59%) Frame = +3 Query: 453 ALRGKPRESQTKSSEMQAPSLAHVSDLHKETELNNAGDAHDETTSSITDEVTLSSEPSV 629 A+ G+P +S++K E AP+ + VS+ T+L+ A A ++T S+TD T EP V Sbjct: 209 AVNGEPEQSESKGREQAAPT-STVSETLPSTKLSLAQPA-NQTDQSLTD--TALPEPRV 263
>K1210_HUMAN (Q9ULL0) Protein KIAA1210| Length = 1093 Score = 30.0 bits (66), Expect = 6.0 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +3 Query: 141 GDLNAKTLSFEDCPDSSELSNRHELGQDNIEILDMSDG----YHGNKDSVL-EMSDKGEA 305 GD+ AKTL SS + E+ D+ I + DG HG+ L + D+ E Sbjct: 139 GDVYAKTLPPRSLFQSSRKPDAEEVSSDSENIPEEGDGSEELAHGHSSQSLGKFEDEQEV 198 Query: 306 FSLQTNFISTEQFLTSSDILESGILNSVL 392 FS +F+ E +S + L+ L+ L Sbjct: 199 FSESKSFV--EDLSSSEEELDLRCLSQAL 225
>YP68_CAEEL (Q09217) Hypothetical protein B0495.8| Length = 313 Score = 30.0 bits (66), Expect = 6.0 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Frame = +3 Query: 9 DTYRVSNSGKFPSVNLTHKEVGGSYYIVREIMRDIIQENRVLGPGDLNAKTLSFEDCPDS 188 D ++ N GK HK V ++EI D E + GPG +AK EDC Sbjct: 139 DIEKLGNEGKIEESMKLHKYVEELREKIQEI-EDSQTEVKTAGPGSNSAKLRVCEDCGAQ 197 Query: 189 SELSNR------HELGQDNIEILDMSDGYHGNKDSVLEMSDKGE 302 +++ H G+ +I +++ + Y K+++ E + E Sbjct: 198 LNITDHESRIADHYNGKMHIGMVETRETYLKMKETIDERRKERE 241
>POLG_EMCV (P03304) Genome polyprotein [Contains: Coat protein VP4 (Rho); Coat| protein VP2 (Beta); Coat protein VP3 (Gamma); Coat protein VP1 (Alpha); Picornain 2A (EC 3.4.22.29) (Core protein P2A) (G); Core protein P2B (I); Core protein P2C (C); Core pro Length = 2290 Score = 30.0 bits (66), Expect = 6.0 Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 5/166 (3%) Frame = +3 Query: 153 AKTLSFEDCPDSSELSNRH-----ELGQDNIEILDMSDGYHGNKDSVLEMSDKGEAFSLQ 317 A +L+FE+CP S L R+ + ++ ++DG D L+M F LQ Sbjct: 11 AHSLTFEECPKCSALQYRNGFYLLKYDEEWYPEELLTDGEDDVFDPELDME---VVFELQ 67 Query: 318 TNFISTEQFLTSSDILESGILNSVLHNGNVEDATCLEPNLEKQDEALRGKPRESQTKSSE 497 N S+++ +SS+ E I+N+ ++ +++ L N D ES + + Sbjct: 68 GNSTSSDKNNSSSEGNEGVIINN-FYSNQYQNSIDLSANAAGSDPPRLRSIFESLSGAVN 126 Query: 498 MQAPSLAHVSDLHKETELNNAGDAHDETTSSITDEVTLSSEPSVVS 635 + L ++D + E E+ N D +T +I + T S + +V+S Sbjct: 127 AFSNMLPLLADQNTE-EMENLSDRGLKTLPAIRSQ-TPSQQWAVLS 170
>BIOA_BUCAP (Q8K9P0) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase| (EC 2.6.1.62) (7,8-diamino-pelargonic acid aminotransferase) (DAPA aminotransferase) Length = 432 Score = 29.6 bits (65), Expect = 7.9 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 213 LGQDNIEILDMSDGYHGNKDSVLEMSD 293 LGQ +IL + +GYHG+ S + +SD Sbjct: 130 LGQKRTQILTIKNGYHGDTFSAMSISD 156
>USO1_YEAST (P25386) Intracellular protein transport protein USO1 (Int-1)| Length = 1790 Score = 29.6 bits (65), Expect = 7.9 Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 13/98 (13%) Frame = +3 Query: 294 KGEAFSLQTNFISTEQFLTSSDILESG----------ILNSVLHNGNVEDATCLEPNLEK 443 KGE SLQT ST + LT I + ILNS H+ E+ + LE L+ Sbjct: 743 KGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQILNS-SHSSLKENFSILETELKN 801 Query: 444 QDEALRGKPR---ESQTKSSEMQAPSLAHVSDLHKETE 548 ++L + +TK E Q L + S +HK+ + Sbjct: 802 VRDSLDEMTQLRDVLETKDKENQTALLEYKSTIHKQED 839
>YN61_YEAST (P42839) Protein YNL321W| Length = 908 Score = 29.6 bits (65), Expect = 7.9 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 11/86 (12%) Frame = +3 Query: 393 HNGNVEDATCLEPN-LEKQDEALRGKPRESQTKSSEMQAPSLAHVSDL----------HK 539 H+ +++ C P+ LE D+A ES T A + H + H+ Sbjct: 156 HDLLIDEINCQSPSHLENNDQASNASSTESFTLRERQDAINETHPFGIRIWKPALYKKHR 215 Query: 540 ETELNNAGDAHDETTSSITDEVTLSS 617 + A D H+ +IT EVT S+ Sbjct: 216 SVQRTAAQDIHETQLKTITWEVTCSN 241
>MCPC_BACSU (P54576) Methyl-accepting chemotaxis protein mcpC| Length = 654 Score = 29.6 bits (65), Expect = 7.9 Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 14/154 (9%) Frame = +3 Query: 216 GQDNIEILDMSDGYHGNKDSVLEMSDKGEAFSLQTNFISTE------QFLTSSDILESGI 377 GQ I +++ G V +++K E+ S + I+ E + +S D G+ Sbjct: 377 GQIAKAIEEVAAGASEQASEVETINEKSESLSTKIRQIAEEAGGIKERSKSSEDASYKGL 436 Query: 378 --LNSVLHNGNVEDATCLEPNLEKQDEALRGKPRESQTKSSEMQAPSLAHVSD------L 533 L +L N E N+E + E E+QTK+ E +++++SD L Sbjct: 437 HALGQLLMKSN-------EANMETKKEETMLLDLENQTKNIEEVVTAISNISDQTNLLAL 489 Query: 534 HKETELNNAGDAHDETTSSITDEVTLSSEPSVVS 635 ++ E AG++ + + DEV +E S +S Sbjct: 490 NRSIEAARAGES-GRGFAVVADEVRKLAEQSALS 522 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,386,433 Number of Sequences: 219361 Number of extensions: 1869527 Number of successful extensions: 5409 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 5241 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5405 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
