ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags26e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
2emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb... 135 2e-28
3dbj|AK069942.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
5emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa... 135 2e-28
6ref|NM_115077.3| Arabidopsis thaliana unknown protein AT3G52170 ... 44 0.56
7gb|AY096650.1| Arabidopsis thaliana unknown protein (At3g52170) ... 44 0.56
8emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, B... 44 0.56
9emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BA... 44 0.56
10emb|BX825084.1|CNS0A7VA Arabidopsis thaliana Full-length cDNA Co... 44 0.56
11ref|NM_113433.1| Arabidopsis thaliana unknown protein AT3G25270 ... 42 2.2
12ref|NM_183264.1| Mus musculus RIKEN cDNA 5830405N20 gene (583040... 42 2.2
13gb|AC161283.2| Pan troglodytes BAC clone CH251-354N8 from chromo... 42 2.2
14gb|AC004015.1| Homo sapiens BAC clone CTA-333F24 from 7, complet... 42 2.2
15emb|AL138927.14| Human DNA sequence from clone RP11-184F4 on chr... 42 2.2
16gb|AC040965.8| Homo sapiens chromosome 8, clone RP11-481K20, com... 42 2.2
17dbj|AK156313.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 2.2
18dbj|AK163027.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 42 2.2
19gb|AC093179.1| Homo sapiens chromosome 3 clone RP11-983J7 map 3p... 42 2.2
20dbj|AK017900.1| Mus musculus adult male thymus cDNA, RIKEN full-... 42 2.2
21gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Can... 42 2.2
22gb|AC105038.5| Homo sapiens chromosome 8, clone CTD-2351P9, comp... 42 2.2
23gb|AC090937.2| Homo sapiens chromosome 3 clone RP11-316A10 map 3... 42 2.2
24dbj|AB026647.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.2
25dbj|AP002006.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.2
26dbj|AP001981.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.2
27gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, com... 40 8.7
28gb|AC090031.2| Bos taurus clone RP42-341K3, complete sequence 40 8.7
29gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 8.7
30gb|AC113107.15| Mus musculus chromosome 10, clone RP23-325G13, c... 40 8.7
31emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 ... 40 8.7
32emb|AL954202.1| Pan troglodytes chromosome 22 clone PTB-083P20 m... 40 8.7
33ref|XM_797975.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.7
34ref|XM_814274.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.7
35ref|XM_734475.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.7
36emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E1... 40 8.7
37emb|AL954204.1| Pan troglodytes chromosome 22 clone PTB-051G08 m... 40 8.7
38emb|AL954203.1| Pan troglodytes chromosome 22 clone RP43-019O24 ... 40 8.7
39gb|AC091900.3| Homo sapiens chromosome 5 clone RP11-158K14, comp... 40 8.7
40gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 8.7
41gb|AC009220.10|AC009220 Homo sapiens chromosome 7 clone RP11-365... 40 8.7
42gb|AC153942.8| Mus musculus 10 BAC RP24-174M19 (Roswell Park Can... 40 8.7
43dbj|AP000035.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 8.7
44gb|AC084656.1|CBRG46J06 Caenorhabditis briggsae cosmid G46J06, c... 40 8.7
45gb|AC084423.1|AC084423 Caenorhabditis briggsae cosmid CB020D11, ... 40 8.7
46gb|AC018644.6|AC018644 Homo sapiens chromosome 7 clone RP11-383F... 40 8.7
47emb|CT954231.1| Medicago truncatula chromosome 5 clone mth2-166e... 40 8.7
48gb|AC006571.12|AC006571 Homo sapiens, clone hRPK.23_A_1, complet... 40 8.7
49dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.7
50emb|AL772171.7| Mouse DNA sequence from clone RP23-36B3 on chrom... 40 8.7
51gb|AC125214.4| Mus musculus BAC clone RP23-84H24 from chromosome... 40 8.7
52emb|AL928546.5| Mouse DNA sequence from clone RP23-412C22 on chr... 40 8.7
53dbj|AP000264.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.7
54dbj|AP000176.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.7
55dbj|AP000100.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 8.7 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  135 bits (68), Expect = 2e-28
 Identities = 182/220 (82%)
 Strand = Plus / Minus

                                                                            
Query: 33       gggaagtttccttcagtcaatcttacacacaaggaggttggaggatcatattatatagtc 92
                ||||| || |||||||||||||| || || ||||| || ||||| |||||||| ||||| 
Sbjct: 20855867 gggaaattcccttcagtcaatctcacgcataaggaagtcggagggtcatattacatagtt 20855808

                                                                            
Query: 93       cgtgagattatgagagatatcatccaagagaacagagttcttggccctggtgacttgaat 152
                ||||| ||  ||||||||||||||||||||||||| ||||| |||||||| | |||||||
Sbjct: 20855807 cgtgaaatcgtgagagatatcatccaagagaacagggttctgggccctggcggcttgaat 20855748

                                                                            
Query: 153      gctaagacattgagttttgaggattgccctgattcttcagaattatcaaataggcatgaa 212
                || | | || |||||||||| || ||||||||||||   || | | |   || |||||||
Sbjct: 20855747 gccacggcactgagttttgaagactgccctgattctgtggagtcacctgttacgcatgaa 20855688

                                                        
Query: 213      ttgggccaagacaacatagagatattagatatgtctgatg 252
                 ||||||||||||   | ||||||||||||||||||||||
Sbjct: 20855687 ctgggccaagacagtgtcgagatattagatatgtctgatg 20855648



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                            
Query: 370      ctggtattctgaacagtgtactccacaatgggaatgtagaagatgcaacatgcttggagc 429
                |||||||||||||  ||| |||||| ||||||||  ||| ||||    ||||||| ||| 
Sbjct: 20855572 ctggtattctgaatggtgcactccaaaatgggaacatagcagatatggcatgcttagaga 20855513

                                        
Query: 430      caaaccttgagaaacaagatgaag 453
                |||||   ||||||||||||||||
Sbjct: 20855512 caaacagcgagaaacaagatgaag 20855489
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>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101075

 Score =  135 bits (68), Expect = 2e-28
 Identities = 182/220 (82%)
 Strand = Plus / Minus

                                                                         
Query: 33    gggaagtttccttcagtcaatcttacacacaaggaggttggaggatcatattatatagtc 92
             ||||| || |||||||||||||| || || ||||| || ||||| |||||||| ||||| 
Sbjct: 57597 gggaaattcccttcagtcaatctcacgcataaggaagtcggagggtcatattacatagtt 57538

                                                                         
Query: 93    cgtgagattatgagagatatcatccaagagaacagagttcttggccctggtgacttgaat 152
             ||||| ||  ||||||||||||||||||||||||| ||||| |||||||| | |||||||
Sbjct: 57537 cgtgaaatcgtgagagatatcatccaagagaacagggttctgggccctggcggcttgaat 57478

                                                                         
Query: 153   gctaagacattgagttttgaggattgccctgattcttcagaattatcaaataggcatgaa 212
             || | | || |||||||||| || ||||||||||||   || | | |   || |||||||
Sbjct: 57477 gccacggcactgagttttgaagactgccctgattctgtggagtcacctgttacgcatgaa 57418

                                                     
Query: 213   ttgggccaagacaacatagagatattagatatgtctgatg 252
              ||||||||||||   | ||||||||||||||||||||||
Sbjct: 57417 ctgggccaagacagtgtcgagatattagatatgtctgatg 57378



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                         
Query: 370   ctggtattctgaacagtgtactccacaatgggaatgtagaagatgcaacatgcttggagc 429
             |||||||||||||  ||| |||||| ||||||||  ||| ||||    ||||||| ||| 
Sbjct: 57302 ctggtattctgaatggtgcactccaaaatgggaacatagcagatatggcatgcttagaga 57243

                                     
Query: 430   caaaccttgagaaacaagatgaag 453
             |||||   ||||||||||||||||
Sbjct: 57242 caaacagcgagaaacaagatgaag 57219
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>dbj|AK069942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039O07, full
           insert sequence
          Length = 2150

 Score =  135 bits (68), Expect = 2e-28
 Identities = 182/220 (82%)
 Strand = Plus / Plus

                                                                       
Query: 33  gggaagtttccttcagtcaatcttacacacaaggaggttggaggatcatattatatagtc 92
           ||||| || |||||||||||||| || || ||||| || ||||| |||||||| ||||| 
Sbjct: 371 gggaaattcccttcagtcaatctcacgcataaggaagtcggagggtcatattacatagtt 430

                                                                       
Query: 93  cgtgagattatgagagatatcatccaagagaacagagttcttggccctggtgacttgaat 152
           ||||| ||  ||||||||||||||||||||||||| ||||| |||||||| | |||||||
Sbjct: 431 cgtgaaatcgtgagagatatcatccaagagaacagggttctgggccctggcggcttgaat 490

                                                                       
Query: 153 gctaagacattgagttttgaggattgccctgattcttcagaattatcaaataggcatgaa 212
           || | | || |||||||||| || ||||||||||||   || | | |   || |||||||
Sbjct: 491 gccacggcactgagttttgaagactgccctgattctgtggagtcacctgttacgcatgaa 550

                                                   
Query: 213 ttgggccaagacaacatagagatattagatatgtctgatg 252
            ||||||||||||   | ||||||||||||||||||||||
Sbjct: 551 ctgggccaagacagtgtcgagatattagatatgtctgatg 590
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  135 bits (68), Expect = 2e-28
 Identities = 182/220 (82%)
 Strand = Plus / Minus

                                                                            
Query: 33       gggaagtttccttcagtcaatcttacacacaaggaggttggaggatcatattatatagtc 92
                ||||| || |||||||||||||| || || ||||| || ||||| |||||||| ||||| 
Sbjct: 20782081 gggaaattcccttcagtcaatctcacgcataaggaagtcggagggtcatattacatagtt 20782022

                                                                            
Query: 93       cgtgagattatgagagatatcatccaagagaacagagttcttggccctggtgacttgaat 152
                ||||| ||  ||||||||||||||||||||||||| ||||| |||||||| | |||||||
Sbjct: 20782021 cgtgaaatcgtgagagatatcatccaagagaacagggttctgggccctggcggcttgaat 20781962

                                                                            
Query: 153      gctaagacattgagttttgaggattgccctgattcttcagaattatcaaataggcatgaa 212
                || | | || |||||||||| || ||||||||||||   || | | |   || |||||||
Sbjct: 20781961 gccacggcactgagttttgaagactgccctgattctgtggagtcacctgttacgcatgaa 20781902

                                                        
Query: 213      ttgggccaagacaacatagagatattagatatgtctgatg 252
                 ||||||||||||   | ||||||||||||||||||||||
Sbjct: 20781901 ctgggccaagacagtgtcgagatattagatatgtctgatg 20781862



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                            
Query: 370      ctggtattctgaacagtgtactccacaatgggaatgtagaagatgcaacatgcttggagc 429
                |||||||||||||  ||| |||||| ||||||||  ||| ||||    ||||||| ||| 
Sbjct: 20781786 ctggtattctgaatggtgcactccaaaatgggaacatagcagatatggcatgcttagaga 20781727

                                        
Query: 430      caaaccttgagaaacaagatgaag 453
                |||||   ||||||||||||||||
Sbjct: 20781726 caaacagcgagaaacaagatgaag 20781703
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>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 107819

 Score =  135 bits (68), Expect = 2e-28
 Identities = 182/220 (82%)
 Strand = Plus / Plus

                                                                          
Query: 33     gggaagtttccttcagtcaatcttacacacaaggaggttggaggatcatattatatagtc 92
              ||||| || |||||||||||||| || || ||||| || ||||| |||||||| ||||| 
Sbjct: 103128 gggaaattcccttcagtcaatctcacgcataaggaagtcggagggtcatattacatagtt 103187

                                                                          
Query: 93     cgtgagattatgagagatatcatccaagagaacagagttcttggccctggtgacttgaat 152
              ||||| ||  ||||||||||||||||||||||||| ||||| |||||||| | |||||||
Sbjct: 103188 cgtgaaatcgtgagagatatcatccaagagaacagggttctgggccctggcggcttgaat 103247

                                                                          
Query: 153    gctaagacattgagttttgaggattgccctgattcttcagaattatcaaataggcatgaa 212
              || | | || |||||||||| || ||||||||||||   || | | |   || |||||||
Sbjct: 103248 gccacggcactgagttttgaagactgccctgattctgtggagtcacctgttacgcatgaa 103307

                                                      
Query: 213    ttgggccaagacaacatagagatattagatatgtctgatg 252
               ||||||||||||   | ||||||||||||||||||||||
Sbjct: 103308 ctgggccaagacagtgtcgagatattagatatgtctgatg 103347



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 68/84 (80%)
 Strand = Plus / Plus

                                                                          
Query: 370    ctggtattctgaacagtgtactccacaatgggaatgtagaagatgcaacatgcttggagc 429
              |||||||||||||  ||| |||||| ||||||||  ||| ||||    ||||||| ||| 
Sbjct: 103423 ctggtattctgaatggtgcactccaaaatgggaacatagcagatatggcatgcttagaga 103482

                                      
Query: 430    caaaccttgagaaacaagatgaag 453
              |||||   ||||||||||||||||
Sbjct: 103483 caaacagcgagaaacaagatgaag 103506
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>ref|NM_115077.3| Arabidopsis thaliana unknown protein AT3G52170 mRNA, complete cds
          Length = 1786

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 96  gagattatgagagatatcatccaagagaacagagttcttggccctggtgacttg 149
           |||||| | ||||| || |||||||| || ||||| ||||| ||||||||||||
Sbjct: 370 gagattgttagagagattatccaagaaaatagagtccttggtcctggtgacttg 423
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>gb|AY096650.1| Arabidopsis thaliana unknown protein (At3g52170) mRNA, complete cds
          Length = 1802

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 96  gagattatgagagatatcatccaagagaacagagttcttggccctggtgacttg 149
           |||||| | ||||| || |||||||| || ||||| ||||| ||||||||||||
Sbjct: 370 gagattgttagagagattatccaagaaaatagagtccttggtcctggtgacttg 423
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>emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, BAC clone T25B15
          Length = 77350

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 96   gagattatgagagatatcatccaagagaacagagttcttggccctggtgacttg 149
            |||||| | ||||| || |||||||| || ||||| ||||| ||||||||||||
Sbjct: 2310 gagattgttagagagattatccaagaaaatagagtccttggtcctggtgacttg 2257
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>emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BAC clone F4F15
          Length = 123209

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 96    gagattatgagagatatcatccaagagaacagagttcttggccctggtgacttg 149
             |||||| | ||||| || |||||||| || ||||| ||||| ||||||||||||
Sbjct: 97832 gagattgttagagagattatccaagaaaatagagtccttggtcctggtgacttg 97779
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>emb|BX825084.1|CNS0A7VA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH95ZC08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1716

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 96  gagattatgagagatatcatccaagagaacagagttcttggccctggtgacttg 149
           |||||| ||||||| || || |||||||| ||||| | ||| ||||||||||||
Sbjct: 300 gagattgtgagagagattatgcaagagaagagagtgcgtggtcctggtgacttg 353
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>ref|NM_113433.1| Arabidopsis thaliana unknown protein AT3G25270 mRNA, complete cds
          Length = 1032

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 412 atgcaacatgcttggagccaa 432
           |||||||||||||||||||||
Sbjct: 742 atgcaacatgcttggagccaa 762
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>ref|NM_183264.1| Mus musculus RIKEN cDNA 5830405N20 gene (5830405N20Rik), mRNA
          Length = 1428

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 gattgccctgattcttcagaa 194
           |||||||||||||||||||||
Sbjct: 152 gattgccctgattcttcagaa 132
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>gb|AC161283.2| Pan troglodytes BAC clone CH251-354N8 from chromosome 7, complete
             sequence
          Length = 160292

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   gagttttgaggattgccctga 184
             |||||||||||||||||||||
Sbjct: 62442 gagttttgaggattgccctga 62422
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>gb|AC004015.1| Homo sapiens BAC clone CTA-333F24 from 7, complete sequence
          Length = 144239

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 164    gagttttgaggattgccctga 184
              |||||||||||||||||||||
Sbjct: 141132 gagttttgaggattgccctga 141112
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>emb|AL138927.14| Human DNA sequence from clone RP11-184F4 on chromosome 1q31.1-31.3,
             complete sequence
          Length = 165067

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 437   tgagaaacaagatgaagcctt 457
             |||||||||||||||||||||
Sbjct: 24798 tgagaaacaagatgaagcctt 24818
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>gb|AC040965.8| Homo sapiens chromosome 8, clone RP11-481K20, complete sequence
          Length = 189188

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 521  tgtttctgatttgcataaaga 541
            |||||||||||||||||||||
Sbjct: 8801 tgtttctgatttgcataaaga 8821
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>dbj|AK156313.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830016D11 product:hypothetical protein,
           full insert sequence
          Length = 1665

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 gattgccctgattcttcagaa 194
           |||||||||||||||||||||
Sbjct: 389 gattgccctgattcttcagaa 369
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>dbj|AK163027.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430083A01 product:hypothetical protein,
           full insert sequence
          Length = 1104

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 gattgccctgattcttcagaa 194
           |||||||||||||||||||||
Sbjct: 562 gattgccctgattcttcagaa 542
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>gb|AC093179.1| Homo sapiens chromosome 3 clone RP11-983J7 map 3p, complete sequence
          Length = 181321

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 439    agaaacaagatgaagccttgc 459
              |||||||||||||||||||||
Sbjct: 165131 agaaacaagatgaagccttgc 165111
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>dbj|AK017900.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5830405N20 product:hypothetical protein,
           full insert sequence
          Length = 1428

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 gattgccctgattcttcagaa 194
           |||||||||||||||||||||
Sbjct: 152 gattgccctgattcttcagaa 132
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>gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190387

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 174   gattgccctgattcttcagaa 194
             |||||||||||||||||||||
Sbjct: 77130 gattgccctgattcttcagaa 77110
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>gb|AC105038.5| Homo sapiens chromosome 8, clone CTD-2351P9, complete sequence
          Length = 98334

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 521   tgtttctgatttgcataaaga 541
             |||||||||||||||||||||
Sbjct: 19037 tgtttctgatttgcataaaga 19017
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>gb|AC090937.2| Homo sapiens chromosome 3 clone RP11-316A10 map 3p, complete sequence
          Length = 160702

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 439   agaaacaagatgaagccttgc 459
             |||||||||||||||||||||
Sbjct: 53109 agaaacaagatgaagccttgc 53129
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>dbj|AB026647.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJL12
          Length = 81542

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 412   atgcaacatgcttggagccaa 432
             |||||||||||||||||||||
Sbjct: 73146 atgcaacatgcttggagccaa 73126
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>dbj|AP002006.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-723C19, complete
              sequence
          Length = 167355

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 537    aaagaaactgagctcaacaat 557
              |||||||||||||||||||||
Sbjct: 116686 aaagaaactgagctcaacaat 116706
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>dbj|AP001981.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-361A21, complete
             sequence
          Length = 183481

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 537   aaagaaactgagctcaacaat 557
             |||||||||||||||||||||
Sbjct: 57985 aaagaaactgagctcaacaat 58005
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>gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, complete sequence
          Length = 193047

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 107  agatatcatccaagagaaca 126
            ||||||||||||||||||||
Sbjct: 2257 agatatcatccaagagaaca 2276
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>gb|AC090031.2| Bos taurus clone RP42-341K3, complete sequence
          Length = 213841

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 324   ttcatcagcactgaacagttcctg 347
             |||||||||| |||||||||||||
Sbjct: 53980 ttcatcagcaatgaacagttcctg 53957
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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 324    ttcatcagcactgaacagttcctg 347
              |||||||||| |||||||||||||
Sbjct: 921354 ttcatcagcaatgaacagttcctg 921331
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>gb|AC113107.15| Mus musculus chromosome 10, clone RP23-325G13, complete sequence
          Length = 207239

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   tctcagactaagagttctga 496
             ||||||||||||||||||||
Sbjct: 34950 tctcagactaagagttctga 34969
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>emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 map q21.1, complete
            sequence
          Length = 174216

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 158  gacattgagttttgaggatt 177
            ||||||||||||||||||||
Sbjct: 1027 gacattgagttttgaggatt 1008
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>emb|AL954202.1| Pan troglodytes chromosome 22 clone PTB-083P20 map q21.1, complete
              sequence
          Length = 197872

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    gacattgagttttgaggatt 177
              ||||||||||||||||||||
Sbjct: 173543 gacattgagttttgaggatt 173524
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>ref|XM_797975.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053503853.10) partial mRNA
          Length = 2487

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 385  gtgtactccacaatgggaat 404
            ||||||||||||||||||||
Sbjct: 1226 gtgtactccacaatgggaat 1207
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>ref|XM_814274.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511817.230) partial mRNA
          Length = 2490

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 385  gtgtactccacaatgggaat 404
            ||||||||||||||||||||
Sbjct: 1232 gtgtactccacaatgggaat 1213
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>ref|XM_734475.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000461.00.0)
           partial mRNA
          Length = 489

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 396 aatgggaatgtagaagatgcaaca 419
           ||||||||||||||| ||||||||
Sbjct: 391 aatgggaatgtagaaaatgcaaca 414
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>emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E19 on chromosome 6q23.2-24.2,
             complete sequence
          Length = 110885

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 64    aggaggttggaggatcatattata 87
             |||||||||||| |||||||||||
Sbjct: 48654 aggaggttggagaatcatattata 48677
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>emb|AL954204.1| Pan troglodytes chromosome 22 clone PTB-051G08 map q21.1, complete
             sequence
          Length = 146898

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   gacattgagttttgaggatt 177
             ||||||||||||||||||||
Sbjct: 34091 gacattgagttttgaggatt 34072
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>emb|AL954203.1| Pan troglodytes chromosome 22 clone RP43-019O24 map q21.1, complete
              sequence
          Length = 206110

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    gacattgagttttgaggatt 177
              ||||||||||||||||||||
Sbjct: 100611 gacattgagttttgaggatt 100592
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>gb|AC091900.3| Homo sapiens chromosome 5 clone RP11-158K14, complete sequence
          Length = 180679

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 597   gatgaggttactctttcctc 616
             ||||||||||||||||||||
Sbjct: 85695 gatgaggttactctttcctc 85714
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 266     caaagattctgtgttggaaatgtc 289
               |||||||||||||||||| |||||
Sbjct: 4112308 caaagattctgtgttggatatgtc 4112331
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>gb|AC009220.10|AC009220 Homo sapiens chromosome 7 clone RP11-365F18, complete sequence
          Length = 184520

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   agatatcatccaagagaaca 126
             ||||||||||||||||||||
Sbjct: 36331 agatatcatccaagagaaca 36312
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>gb|AC153942.8| Mus musculus 10 BAC RP24-174M19 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 146201

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   tctcagactaagagttctga 496
             ||||||||||||||||||||
Sbjct: 22213 tctcagactaagagttctga 22194
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>dbj|AP000035.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 6/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   gacattgagttttgaggatt 177
             ||||||||||||||||||||
Sbjct: 43726 gacattgagttttgaggatt 43745
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>gb|AC084656.1|CBRG46J06 Caenorhabditis briggsae cosmid G46J06, complete sequence
          Length = 42404

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 515   tgctcatgtttctgatttgcataa 538
             |||| |||||||||||||||||||
Sbjct: 35156 tgctaatgtttctgatttgcataa 35133
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>gb|AC084423.1|AC084423 Caenorhabditis briggsae cosmid CB020D11, complete sequence
          Length = 85565

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   ttcattgcaaacgaatttca 327
             ||||||||||||||||||||
Sbjct: 19758 ttcattgcaaacgaatttca 19777
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>gb|AC018644.6|AC018644 Homo sapiens chromosome 7 clone RP11-383F6, complete sequence
          Length = 193643

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    agatatcatccaagagaaca 126
              ||||||||||||||||||||
Sbjct: 138672 agatatcatccaagagaaca 138653
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>emb|CT954231.1| Medicago truncatula chromosome 5 clone mth2-166e2, COMPLETE SEQUENCE
          Length = 122895

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 512   tcttgctcatgtttctgatt 531
             ||||||||||||||||||||
Sbjct: 66211 tcttgctcatgtttctgatt 66192
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>gb|AC006571.12|AC006571 Homo sapiens, clone hRPK.23_A_1, complete sequence
          Length = 134896

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 64     aggaggttggaggatcatattata 87
              |||||||||||| |||||||||||
Sbjct: 132537 aggaggttggagaatcatattata 132560
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>dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, section 57/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    gacattgagttttgaggatt 177
              ||||||||||||||||||||
Sbjct: 130334 gacattgagttttgaggatt 130315
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>emb|AL772171.7| Mouse DNA sequence from clone RP23-36B3 on chromosome 4, complete
             sequence
          Length = 209864

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 269   agattctgtgttggaaatgtctga 292
             |||||||||||||| |||||||||
Sbjct: 17387 agattctgtgttggcaatgtctga 17364
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>gb|AC125214.4| Mus musculus BAC clone RP23-84H24 from chromosome 3, complete sequence
          Length = 214943

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 334   ctgaacagttcctgacttcatctg 357
             ||||||||||||||| ||||||||
Sbjct: 63197 ctgaacagttcctgagttcatctg 63174
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>emb|AL928546.5| Mouse DNA sequence from clone RP23-412C22 on chromosome 2, complete
              sequence
          Length = 193834

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 618    gaacctagtgtagtttctca 637
              ||||||||||||||||||||
Sbjct: 101276 gaacctagtgtagtttctca 101257
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>dbj|AP000264.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
            clone:T1844, complete sequence
          Length = 60455

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 158  gacattgagttttgaggatt 177
            ||||||||||||||||||||
Sbjct: 1287 gacattgagttttgaggatt 1268
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>dbj|AP000176.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 3/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   gacattgagttttgaggatt 177
             ||||||||||||||||||||
Sbjct: 93173 gacattgagttttgaggatt 93154
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>dbj|AP000100.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 3/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   gacattgagttttgaggatt 177
             ||||||||||||||||||||
Sbjct: 93173 gacattgagttttgaggatt 93154


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,048,942
Number of Sequences: 3902068
Number of extensions: 6048942
Number of successful extensions: 120475
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120236
Number of HSP's gapped (non-prelim): 235
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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