Clone Information

BLAST Search Result

Clone Name	bags25o24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	POF11_SCHPO (Q09855) F-box/WD-repeat protein pof11	37	0.061
2	SNE_ARATH (Q9LUB6) F-box protein SNE (Protein SNEEZY) (Sleepy pr...	37	0.061
3	GID2_ARATH (Q9STX3) F-box protein GID2 (Protein SLEEPY1)	36	0.10
4	FBW12_HUMAN (Q6X9E4) F-box/WD-repeat protein 12 (F-box and WD-40...	35	0.13
5	FBXW5_MOUSE (Q9QXW2) F-box/WD-repeat protein 5 (F-box and WD-40 ...	35	0.18
6	JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylatio...	34	0.30
7	JHD1B_XENLA (Q640I9) JmjC domain-containing histone demethylatio...	34	0.39
8	FBXW5_HUMAN (Q969U6) F-box/WD-repeat protein 5 (F-box and WD-40 ...	34	0.39
9	FBX3_HUMAN (Q9UK99) F-box only protein 3	34	0.39
10	FBSP1_MOUSE (Q8K3B1) F-box/SPRY-domain protein 1 (F-box only pro...	34	0.39
11	YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7	33	0.51
12	FBXL5_MOUSE (Q8C2S5) F-box/LRR-repeat protein 5 (F-box and leuci...	33	0.51
13	AP2B_HUMAN (Q92481) Transcription factor AP-2 beta (AP2-beta) (A...	33	0.51
14	AP2B_CANFA (Q76HI7) Transcription factor AP-2 beta (AP2-beta) (A...	33	0.51
15	AP2B_MOUSE (Q61313) Transcription factor AP-2 beta (AP2-beta) (A...	33	0.51
16	POF10_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding...	33	0.51
17	JHD1A_MOUSE (P59997) JmjC domain-containing histone demethylatio...	33	0.51
18	JHD1B_HUMAN (Q8NHM5) JmjC domain-containing histone demethylatio...	33	0.67
19	FBSP1_CAEEL (Q18223) F-box/SPRY-domain protein 1 (F-box synaptic...	33	0.87
20	FBX24_HUMAN (O75426) F-box only protein 24	33	0.87
21	FBX9_HUMAN (Q9UK97) F-box only protein 9 (NY-REN-57 antigen) (Cr...	33	0.87
22	FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	32	1.1
23	FBW1A_HUMAN (Q9Y297) F-box/WD-repeat protein 1A (F-box and WD-re...	32	1.1
24	JHD1A_HUMAN (Q9Y2K7) JmjC domain-containing histone demethylatio...	32	1.1
25	TRCB_XENLA (Q91854) Beta-TrCP (Beta-transducin repeat-containing...	32	1.1
26	FBX18_HUMAN (Q8NFZ0) F-box only protein 18 (EC 3.6.1.-) (F-box D...	32	1.1
27	FBX11_RAT (Q7TSL3) F-box only protein 11	32	1.1
28	FBX11_HUMAN (Q86XK2) F-box only protein 11 (Vitiligo-associated ...	32	1.1
29	JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation...	32	1.5
30	STM_BRAOL (Q9M6D9) Homeobox protein Shootmeristemless	32	1.5
31	FBX9_RAT (Q5U2X1) F-box only protein 9	32	1.5
32	FBX24_MOUSE (Q9D417) F-box only protein 24	32	1.5
33	FBXL5_HUMAN (Q9UKA1) F-box/LRR-repeat protein 5 (F-box and leuci...	32	1.5
34	FBX18_MOUSE (Q8K2I9) F-box only protein 18 (EC 3.6.1.-) (F-box D...	32	1.5
35	GID2_ORYSA (Q7XAK4) F-box protein GID2 (Gibberellin-insensitive ...	32	1.9
36	FBX9_MOUSE (Q8BK06) F-box only protein 9	32	1.9
37	FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	32	1.9
38	FBX3_MOUSE (Q9DC63) F-box only protein 3	32	1.9
39	FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 ...	32	1.9
40	FBX10_HUMAN (Q9UK96) F-box only protein 10	32	1.9
41	FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leuci...	31	3.3
42	JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylatio...	30	4.3
43	POF3_SCHPO (O74991) F-box/TPR-repeat protein pof3	30	4.3
44	FBX31_HUMAN (Q5XUX0) F-box only protein 31	30	4.3
45	YGAD_PSEPU (P72227) 16.7 kDa protein in recA 5'region	30	5.7
46	SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box p...	30	5.7
47	WRK19_ARATH (Q9SZ67) Probable WRKY transcription factor 19 (WRKY...	30	7.4
48	FBXL8_MOUSE (Q8CIG9) F-box/LRR-repeat protein 8 (F-box and leuci...	30	7.4
49	FBX15_MACFA (Q9GKV7) F-box only protein 15	30	7.4
50	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	30	7.4
51	ADO2_ARATH (Q8W420) Adagio protein 2 (LOV kelch protein 2) (Flav...	29	9.7
52	FBX15_HUMAN (Q8NCQ5) F-box only protein 15	29	9.7

>POF11_SCHPO (Q09855) F-box/WD-repeat protein pof11|
          Length = 506

 Score = 36.6 bits (83), Expect = 0.061
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 184 FPGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRK 318
           FP EV   VF  LD  DL  C L+ ++W  + +D   WK +  +K
Sbjct: 76  FPEEVSLRVFSYLDQLDLCKCKLMSKRWKRLLEDPGIWKALYMQK 120

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>SNE_ARATH (Q9LUB6) F-box protein SNE (Protein SNEEZY) (Sleepy protein 2)|
          Length = 157

 Score = 36.6 bits (83), Expect = 0.061
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 193 EVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRK 318
           +VL  +   LDG  L     VCR W  +A++D  W+ +C R+
Sbjct: 33  DVLVEILRRLDGSSLCSAACVCRLWSAVARNDSIWEELCFRQ 74

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>GID2_ARATH (Q9STX3) F-box protein GID2 (Protein SLEEPY1)|
          Length = 151

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +1

Query: 193 EVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSI 330
           EVLK V    D K L     V + W + A+D+  W+ IC+R W +I
Sbjct: 42  EVLKHV----DAKTLAMSSCVSKIWHKTAQDERLWELICTRHWTNI 83

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>FBW12_HUMAN (Q6X9E4) F-box/WD-repeat protein 12 (F-box and WD-40 domain protein|
           12) (F-box only protein 35)
          Length = 464

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 172 MENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKW 321
           ME   P   LK +F  LD   L+    V + W  IA  DY W+ +  ++W
Sbjct: 1   MEIRLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRW 50

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>FBXW5_MOUSE (Q9QXW2) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein|
           5)
          Length = 573

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWK 300
           P  ++  +F  L   D++   LVCRQW  +++D++ WK
Sbjct: 10  PDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWK 47

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>JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10) (F-box protein FBL10)
          Length = 1309

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 19/46 (41%), Positives = 21/46 (45%)
 Frame = +1

Query: 193  EVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSI 330
            EV  AVF  L  +DL  CM VCR W     D   W  I   +  SI
Sbjct: 1041 EVWMAVFSYLSHRDLCVCMRVCRTWNRWCCDKRLWTRIDLNRCKSI 1086

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>JHD1B_XENLA (Q640I9) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10)
          Length = 1259

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +1

Query: 193  EVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSI 330
            EV  A+F  L  +DL  CM +CR W     D   W  I   +  SI
Sbjct: 991  EVWMAIFSYLSHRDLCICMRICRTWNRWCCDKRLWTQIDLNRCKSI 1036

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>FBXW5_HUMAN (Q969U6) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein|
           5)
          Length = 566

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWK 300
           P  ++  +F  L   D++   LVCRQW  +++D++ W+
Sbjct: 10  PDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWR 47

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>FBX3_HUMAN (Q9UK99) F-box only protein 3|
          Length = 471

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSICKQPPSDTN--F 360
           P + L  +   LD +DL+ C  V R+  +++  D  W+  C + W  I ++  +  N  +
Sbjct: 17  PTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKYW-LISEEEKTQKNQCW 75

Query: 361 QKLYL-TFSKPRKTV-HLPVPKLTFKDLVFYID 453
           + L++ T+S   + + H    K  + DL  Y++
Sbjct: 76  KSLFIDTYSDVGRYIDHYAAIKKAWDDLKKYLE 108

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>FBSP1_MOUSE (Q8K3B1) F-box/SPRY-domain protein 1 (F-box only protein 45)|
          Length = 286

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDD---YFWKCICSR 315
           P  VL+ VF  L+  +L  C LVC+ W      D     W+ +C+R
Sbjct: 40  PSRVLELVFSYLELSELRSCALVCKHWYRCLHGDENSEVWRSLCAR 85

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>YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7|
          Length = 466

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = +1

Query: 148 PGEVQ*LRMENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWK 300
           P +V    +    P EVL  VF  LD K L     VCR W  +A D   W+
Sbjct: 48  PAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQ 98

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>FBXL5_MOUSE (Q8C2S5) F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat|
           protein 5)
          Length = 690

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKW 321
           P EV+ ++F  L+ ++L  C  V  +W ++AK    WK +    W
Sbjct: 209 PPEVMLSIFSYLNPQELCRCSQVSTKWSQLAKTGSLWKHLYPVHW 253

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>AP2B_HUMAN (Q92481) Transcription factor AP-2 beta (AP2-beta) (Activating|
           enhancer-binding protein 2 beta)
          Length = 449

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 21/66 (31%), Positives = 30/66 (45%)
 Frame = -3

Query: 316 SVSRCISRSNHPLQFHTIGGIQACKRPSLYHPVEGKQP*EPHQEIHFPFSITELHQECLY 137
           SVS+    S  PL        Q    P  Y P+   Q  +P+  ++ P+S+  LHQ   +
Sbjct: 34  SVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQH 93

Query: 136 PLGCRQ 119
           P G RQ
Sbjct: 94  PWGQRQ 99

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>AP2B_CANFA (Q76HI7) Transcription factor AP-2 beta (AP2-beta) (Activating|
           enhancer-binding protein 2 beta)
          Length = 449

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 21/66 (31%), Positives = 30/66 (45%)
 Frame = -3

Query: 316 SVSRCISRSNHPLQFHTIGGIQACKRPSLYHPVEGKQP*EPHQEIHFPFSITELHQECLY 137
           SVS+    S  PL        Q    P  Y P+   Q  +P+  ++ P+S+  LHQ   +
Sbjct: 34  SVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQH 93

Query: 136 PLGCRQ 119
           P G RQ
Sbjct: 94  PWGQRQ 99

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>AP2B_MOUSE (Q61313) Transcription factor AP-2 beta (AP2-beta) (Activating|
           enhancer-binding protein 2 beta)
          Length = 448

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 21/66 (31%), Positives = 30/66 (45%)
 Frame = -3

Query: 316 SVSRCISRSNHPLQFHTIGGIQACKRPSLYHPVEGKQP*EPHQEIHFPFSITELHQECLY 137
           SVS+    S  PL        Q    P  Y P+   Q  +P+  ++ P+S+  LHQ   +
Sbjct: 34  SVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQH 93

Query: 136 PLGCRQ 119
           P G RQ
Sbjct: 94  PWGQRQ 99

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>POF10_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding protein 2)|
          Length = 662

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWK 300
           P E+L  +F  LD + L+     C+ W ++  DD  W+
Sbjct: 35  PKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWR 72

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>JHD1A_MOUSE (P59997) JmjC domain-containing histone demethylation protein 1A (EC|
            1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
            leucine-rich repeat protein 11)
          Length = 1161

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
 Frame = +1

Query: 175  ENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFW--------KCICSRKWPSI 330
            E+    EV  +VF  L  K+L  CM VC+ W +   D   W        K I  +    I
Sbjct: 889  ESWMQREVWMSVFRYLSRKELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGI 948

Query: 331  CKQPP-----SDTNFQKLYLTF 381
             K+ P     S TN  K  LT+
Sbjct: 949  IKRQPVSLDLSWTNISKKQLTW 970

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>JHD1B_HUMAN (Q8NHM5) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10) (F-box protein FBL10)
            (Protein JEMMA) (Jumonji containing domain
            EMSY-interactor methyltr
          Length = 1336

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +1

Query: 193  EVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFW 297
            EV  AVF  L  +DL  CM VCR W     D   W
Sbjct: 1068 EVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLW 1102

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>FBSP1_CAEEL (Q18223) F-box/SPRY-domain protein 1 (F-box synaptic protein 1)|
          Length = 332

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 34/116 (29%), Positives = 41/116 (35%), Gaps = 2/116 (1%)
 Frame = +1

Query: 4   DVATPFSSLPDRRPSFHPLEPLQIYSGGPPYRRFFLATPVYILEGTGIPGEVQ*LRMENG 183
           D   P S  PD  P    L P  I    PP RR     P           EV   R+   
Sbjct: 46  DEGNPSSGTPDESPK--QLTPHSI----PPRRRRSPRRP-----------EVSASRL--- 85

Query: 184 FPGEVLKAVFPLLDGKDLVFCMLVCRQWCEI--AKDDYFWKCICSRKWPSICKQPP 345
            P +VL  +F  L  KDL   ML C  W      +D   W+ +  +K P      P
Sbjct: 86  -PLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMEDSDIWQYLLGKKLPEAAVSDP 140

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>FBX24_HUMAN (O75426) F-box only protein 24|
          Length = 580

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 184 FPGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSICKQ 339
           FP E+++ +   L  +DLV     CR + E+   +  W+ IC R  P +  Q
Sbjct: 42  FPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRICRRLSPRLQDQ 93

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>FBX9_HUMAN (Q9UK97) F-box only protein 9 (NY-REN-57 antigen) (Cross-immune|
           reaction antigen 1)
          Length = 447

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = +1

Query: 187 PGEVLKAVFPL-----LDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSICKQPPSD 351
           P EVL  +F       LD + L    LVCR +   A+D   W+  C + W   C +    
Sbjct: 192 PMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPY 251

Query: 352 TNFQKLYLTFSKPR 393
           T++++++L   +PR
Sbjct: 252 TSWREMFL--ERPR 263

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>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7)|
            (Protein archipelago)
          Length = 1326

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +1

Query: 187  PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSICKQPPSD 351
            P E+   V   L+ KDL+     CR W  +  D+  WK  C +    I  +P SD
Sbjct: 896  PRELALFVLSYLEPKDLLRAAQTCRSWRFLCDDNLLWKEKCRK--AQILAEPRSD 948

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>FBW1A_HUMAN (Q9Y297) F-box/WD-repeat protein 1A (F-box and WD-repeats protein|
           beta-TrCP) (E3RSIkappaB) (pIkappaBalpha-E3 receptor
           subunit)
          Length = 605

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 196 VLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSR 315
           + + +   LD K L    LVC++W  +  D   WK +  R
Sbjct: 192 IAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIER 231

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>JHD1A_HUMAN (Q9Y2K7) JmjC domain-containing histone demethylation protein 1A (EC|
            1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
            leucine-rich repeat protein 11) (F-box protein FBL7)
            (F-box protein Lilina)
          Length = 1162

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
 Frame = +1

Query: 175  ENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFW--------KCICSRKWPSI 330
            E+    EV  +VF  L  ++L  CM VC+ W +   D   W        K I  +    I
Sbjct: 890  ESWMQREVWMSVFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGI 949

Query: 331  CKQPP-----SDTNFQKLYLTF 381
             K+ P     S TN  K  LT+
Sbjct: 950  IKRQPVSLDLSWTNISKKQLTW 971

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>TRCB_XENLA (Q91854) Beta-TrCP (Beta-transducin repeat-containing protein)|
          Length = 518

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 196 VLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSR 315
           + + +   LD K L    LVC++W  +  D   WK +  R
Sbjct: 121 IAENILSYLDAKSLCSAELVCKEWYRVTSDGMLWKKLIER 160

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>FBX18_HUMAN (Q8NFZ0) F-box only protein 18 (EC 3.6.1.-) (F-box DNA helicase 1)|
          Length = 1043

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCM-LVCRQWCEIAKDDYF--WKCICSR 315
           P EVL+ VF  L  +DL + + LVC  W EI  D  F  WK +  R
Sbjct: 216 PSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFIPWKKLYHR 261

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>FBX11_RAT (Q7TSL3) F-box only protein 11|
          Length = 843

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 172 MENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWK 300
           ++   P EV+  +F  L  +DL     VC+++ E+A D   WK
Sbjct: 71  LQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWK 113

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>FBX11_HUMAN (Q86XK2) F-box only protein 11 (Vitiligo-associated protein VIT-1)|
          Length = 843

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 172 MENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWK 300
           ++   P EV+  +F  L  +DL     VC+++ E+A D   WK
Sbjct: 71  LQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWK 113

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>JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation protein 1 (EC|
            1.14.11.-)
          Length = 1345

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +1

Query: 196  VLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWK 300
            VLK +F  L    LV C  VC+ W   A D   WK
Sbjct: 1069 VLKIIFRYLPQDTLVTCCSVCKVWSNAAVDPDLWK 1103

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>STM_BRAOL (Q9M6D9) Homeobox protein Shootmeristemless|
          Length = 383

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = -2

Query: 332 QMEGHFREQMHFQK*SSFAISHHWRHTSMQKTKSL--PSSRGKTALRTS-------PGNP 180
           Q  GH ++  H Q+   +A   H +H+S+   +SL  PS   K  +R+S       P   
Sbjct: 39  QHHGHDQQHQHQQQHDGYAYQSHHQHSSLLFLQSLTPPSQEAKNKVRSSCSPSSGAPAYS 98

Query: 179 FSILNH 162
           F  +NH
Sbjct: 99  FMEINH 104

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>FBX9_RAT (Q5U2X1) F-box only protein 9|
          Length = 435

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = +1

Query: 187 PGEVLKAVFPL-----LDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSICKQPPSD 351
           P EVL  +F       LD + L    LVCR +   A+D   W+  C + W   C +    
Sbjct: 180 PMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCMKLVPF 239

Query: 352 TNFQKLYLTFSKPR 393
           +++++++L   +PR
Sbjct: 240 SSWREMFL--ERPR 251

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>FBX24_MOUSE (Q9D417) F-box only protein 24|
          Length = 589

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 184 FPGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSICKQ 339
           FP E+++ +   L  KDLV     C  + E+   +  W+ IC R  P I  Q
Sbjct: 29  FPPELVEHIVSFLPVKDLVALGQTCHYFHEVCDAEGVWRRICRRLSPRIRDQ 80

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>FBXL5_HUMAN (Q9UKA1) F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat|
           protein 5) (F-box protein FBL4/FBL5) (p45SKP2-like
           protein)
          Length = 691

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKW 321
           P EV+ ++F  L+ ++L  C  V  +W ++ K    WK +    W
Sbjct: 209 PPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHW 253

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>FBX18_MOUSE (Q8K2I9) F-box only protein 18 (EC 3.6.1.-) (F-box DNA helicase 1)|
          Length = 1042

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCM-LVCRQWCEIAKDDYF--WKCICSR 315
           P EVL+ +F  L  +DL + + LVC  W EI  D  F  WK +  R
Sbjct: 214 PSEVLRHIFAFLPVEDLYWNLSLVCHLWREIINDPLFIPWKKLYHR 259

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>GID2_ORYSA (Q7XAK4) F-box protein GID2 (Gibberellin-insensitive dwarf protein|
           2) (Protein GIBBERELLIN INSENSITIVE DWARF2)
          Length = 212

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 13/48 (27%)
 Frame = +1

Query: 226 GKDLVFCML-------------VCRQWCEIAKDDYFWKCICSRKWPSI 330
           G+DLVF +L             V R W ++A+D+  W+  C R+W ++
Sbjct: 77  GEDLVFEVLRRAEARTLAAAACVSRGWRQLAEDERLWEAACVREWANL 124

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>FBX9_MOUSE (Q8BK06) F-box only protein 9|
          Length = 437

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = +1

Query: 187 PGEVLKAVFPL-----LDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSICKQPPSD 351
           P EVL  +F       LD + L    LVCR +   A+D   W+  C + W   C +    
Sbjct: 182 PMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCMKLVPY 241

Query: 352 TNFQKLYLTFSKPR 393
            ++++++L   +PR
Sbjct: 242 ASWREMFL--ERPR 253

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>FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBW7) (F-box protein Fbxw6)
           (F-box-WD40 repeat protein 6) (SEL-10)
          Length = 629

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRK 318
           P E+   V   L+ KDL+     CR W  +A+D+  W+  C  +
Sbjct: 207 PKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEE 250

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>FBX3_MOUSE (Q9DC63) F-box only protein 3|
          Length = 480

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKW 321
           P + L  +   +D +DL+ C  V R+  +++  D  W+  C + W
Sbjct: 17  PTDPLLLILSFVDYRDLINCCYVSRRLSQLSTHDPLWRRHCKKYW 61

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>FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBX30) (hCdc4) (Archipelago homolog)
           (hAgo) (SEL-10)
          Length = 707

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRK 318
           P E+   V   L+ KDL+     CR W  +A+D+  W+  C  +
Sbjct: 285 PKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEE 328

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>FBX10_HUMAN (Q9UK96) F-box only protein 10|
          Length = 954

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +1

Query: 181 GFPGEVLKAVFPLLDGKDLVFCMLVCRQWCE--IAKDDYFWKCIC 309
           G P E+ + +   L   DL  C LVCR W E  ++ D   W+ +C
Sbjct: 5   GLPLELWRMILAYLHLPDLGRCSLVCRAWYELILSLDSTRWRQLC 49

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>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCI 306
           P   +  +F  L    L  C  VCR+W  +A D   W+ I
Sbjct: 118 PDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTI 157

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>JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylation protein 1A (EC|
            1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
            leucine-rich repeat protein 11)
          Length = 1146

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +1

Query: 193  EVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSICKQPPSD-TNFQKL 369
            +V  +VF  L  ++L  CM VC+ W +   D   W  I   +  S+  Q  S     Q +
Sbjct: 880  DVWLSVFHYLTHEELCICMRVCKAWYKWGCDKRLWSRIDVSRCKSLVPQALSGIIKRQPI 939

Query: 370  YLTFS 384
            YL  S
Sbjct: 940  YLDLS 944

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>POF3_SCHPO (O74991) F-box/TPR-repeat protein pof3|
          Length = 577

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDD 288
           P EVL  +   L+ K +V CM VC+ W +  K +
Sbjct: 140 PREVLLCILQQLNFKSIVQCMQVCKHWRDCIKKE 173

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>FBX31_HUMAN (Q5XUX0) F-box only protein 31|
          Length = 539

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCICSRKWPSICKQPPSDTNFQK 366
           P E+L  +F  L G DL     VC ++  I   D  W+  C  ++  +C+      N +K
Sbjct: 71  PPELLVEIFASLPGTDLPSLAQVCTKFRRILHTDTIWRRRCREEY-GVCE------NLRK 123

Query: 367 LYLT 378
           L +T
Sbjct: 124 LEIT 127

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>YGAD_PSEPU (P72227) 16.7 kDa protein in recA 5'region|
          Length = 160

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +1

Query: 325 SICKQPPSDTNFQKLYLTFSKPRKTVHLPVPKLTFKDLVFYIDMWLEGSLIFSQAVSG-- 498
           +I + P S   F+  Y+T+S  +KT  L VP++ F  +       +E  +  +QA SG  
Sbjct: 36  AITRVPGSSAWFEAGYVTYSNAQKTRQLGVPEVLFGQVGAVSQEVVEAMVRGAQAASGAR 95

Query: 499 -CILRAGLQNTPSGIP 543
             +  +G+     G P
Sbjct: 96  FAVAVSGVAGPDGGSP 111

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>SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box protein Skp2)|
           (Cyclin A/CDK2-associated protein p45) (p45skp2)
           (F-box/LRR-repeat protein 1)
          Length = 424

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 178 NGFPGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFWKCI 306
           +  P E+L  +F  L   +L+    VC++W  +A D+  W+ +
Sbjct: 98  DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL 140

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>WRK19_ARATH (Q9SZ67) Probable WRKY transcription factor 19 (WRKY DNA-binding|
           protein 19)
          Length = 1895

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 24/88 (27%), Positives = 37/88 (42%)
 Frame = -3

Query: 472 MIPQATCQCKTPDP*K*A*VQEDALSSVAWRMLNRAFGSLCQKEAACRWKAISVSRCISR 293
           MI Q++  C  P P   A     + S ++ ++ N +   LCQ E   +    +  RCIS 
Sbjct: 54  MISQSSSMCTVP-PGMAATPPISSGSGLSQQLNNSSSSKLCQVEGCQKGARDASGRCISH 112

Query: 292 SNHPLQFHTIGGIQACKRPSLYHPVEGK 209
                     GG + C++P      EGK
Sbjct: 113 ----------GGGRRCQKPDCQKGAEGK 130

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>FBXL8_MOUSE (Q8CIG9) F-box/LRR-repeat protein 8 (F-box and leucine-rich repeat|
           protein 8) (F-box protein FBL8)
          Length = 374

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +1

Query: 178 NGFPGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFW 297
           +  P EVL  +F  L  +DL     VCR W   A +   W
Sbjct: 6   DNLPEEVLALIFRDLPLRDLAVATRVCRAWAAAAANSTVW 45

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>FBX15_MACFA (Q9GKV7) F-box only protein 15|
          Length = 434

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFW 297
           P E+L  +F  LD   L+    V R++  +A D++ W
Sbjct: 2   PSEILLKIFSYLDAVSLLCAGCVSRRFYHLANDNFIW 38

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 13  TPFSSLPDRRPSFHPLEPLQIYSGGPPYRRFFLATPVY 126
           TP    P   P+F P  P QI+S  PP+ +    TP Y
Sbjct: 524 TPTYGQPPSPPTFSPPPPRQIHSPPPPHWQPRTPTPTY 561

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>ADO2_ARATH (Q8W420) Adagio protein 2 (LOV kelch protein 2) (Flavin-binding|
           kelch repeat F-box protein 1-like protein 1) (FKF1-like
           protein 1) (F-box only protein 2c) (FBX2c)
          Length = 611

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 232 DLVFCMLVCRQWCEIAKDDYFWKCICSRKW 321
           D+     VCR+  E+ K+D  W+ +C   W
Sbjct: 218 DIASVGCVCRRLNELTKNDDVWRMVCQNTW 247

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>FBX15_HUMAN (Q8NCQ5) F-box only protein 15|
          Length = 434

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 187 PGEVLKAVFPLLDGKDLVFCMLVCRQWCEIAKDDYFW 297
           P E+L  +F  LD   L+    V R++  +A D++ W
Sbjct: 2   PSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 38


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,134,140
Number of Sequences: 219361
Number of extensions: 2058554
Number of successful extensions: 4658
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 4518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4657
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result