>ALR_RAT (Q63042) Augmenter of liver regeneration|
          Length = 125

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
 Frame = +3

Query: 66  WVLLHSLTVQIGDGESQSTFTSICDFIH---NFFICEECRKHFYDMCSSVSVPFKSARDL 236
           W  LH+L     D  +      +  FIH    F+ CEEC +              +    
Sbjct: 27  WAFLHTLAAYYPDMPTPEQQQDMAQFIHIFSKFYPCEECAEDIRKRIDRSQPDTSTRVSF 86

Query: 237 SLWLWSTHNKVNERLMKEEKDMGTGD 314
           S WL   HN+VN +L K + D    D
Sbjct: 87  SQWLCRLHNEVNRKLGKPDFDCSRVD 112

>ALR_MOUSE (P56213) Augmenter of liver regeneration|
          Length = 125

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
 Frame = +3

Query: 66  WVLLHSLTVQIGDGESQSTFTSICDFIH---NFFICEECRKHFYDMCSSVSVPFKSARDL 236
           W  LH+L     D  +      +  FIH    F+ CEEC +              +    
Sbjct: 27  WAFLHTLAAYYPDRPTPEQQQDMAQFIHIFSKFYPCEECAEDIRKRIGRNQPDTSTRVSF 86

Query: 237 SLWLWSTHNKVNERLMKEEKDMGTGD 314
           S WL   HN+VN +L K + D    D
Sbjct: 87  SQWLCRLHNEVNRKLGKPDFDCSRVD 112

>ERV1_YEAST (P27882) Mitochondrial FAD-linked sulfhydryl oxidase ERV1 (EC|
           1.8.3.-) (14 kDa regulatory protein) (Essential for
           respiration and vegetative growth protein 1)
          Length = 189

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
 Frame = +3

Query: 36  VKQXGFSCGLWVLLHSLTVQIGDGESQSTFTSICDFIHNF---FICEECRKHFYDMCSSV 206
           V+Q G S   W LLHS+        +      +  F++ F   + C  C K F       
Sbjct: 87  VEQLGRSS--WTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIREN 144

Query: 207 SVPFKSARDLSLWLWSTHNKVNERLMKEEKD 299
           +   +S  +L  W+   HNKVN++L K + D
Sbjct: 145 APQVESREELGRWMCEAHNKVNKKLRKPKFD 175

>ERV2_YEAST (Q12284) FAD-linked sulfhydryl oxidase ERV2 (EC 1.8.3.-)|
          Length = 196

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = +3

Query: 66  WVLLHSLTVQIGDGESQSTFTSICDFIHNF---FICEECRKHFYDMCSSVSVPFKSARDL 236
           W   H+L  +  D  +      +  FI  +   + C EC  HF  +     V   S    
Sbjct: 86  WKYFHTLLARFPDEPTPEEREKLHTFIGLYAELYPCGECSYHFVKLIEKYPVQTSSRTAA 145

Query: 237 SLWLWSTHNKVNERLMKEEKDMGT 308
           ++W    HNKVNE L K+  D  T
Sbjct: 146 AMWGCHIHNKVNEYLKKDIYDCAT 169

>ALR_HUMAN (P55789) Augmenter of liver regeneration (hERV1 protein)|
          Length = 125

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = +3

Query: 66  WVLLHSLTVQIGDGESQSTFTSICDFIH---NFFICEECRKHFYDMCSSVSVPFKSARDL 236
           W +LH+L     D  +      +  FIH    F+ CEEC +             ++    
Sbjct: 27  WAVLHTLAAYYPDLPTPEQQQDMAQFIHLFSKFYPCEECAEDLRKRLCRNHPDTRTRACF 86

Query: 237 SLWLWSTHNKVNERLMKEEKDMGTGD 314
           + WL   HN+VN +L K + D    D
Sbjct: 87  TQWLCHLHNEVNRKLGKPDFDCSKVD 112

>TRUA_SYNEL (Q8CWM6) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 284

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +3

Query: 9   RXCSAVEVKVKQXGFSCGLWVLLHSLTVQIGDGE-SQSTFTSI 134
           R  + VE++V+  GF  G+  LL  L VQ+G G+ S ++FT I
Sbjct: 188 RRGALVEIEVQASGFLYGMMRLLVGLLVQVGQGQRSPASFTEI 230

>TRUA_SYNP6 (O24712) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 294

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +3

Query: 9   RXCSAVEVKVKQXGFSCGLWVLLHSLTVQIGDG-ESQSTFTSI 134
           R  S +E++V+  GF  G+  LL  L VQ+G+G  S  +FT I
Sbjct: 190 RRDSLIEIEVQASGFLYGMIRLLVGLLVQVGEGSRSLESFTDI 232

>RSIW_BACSU (Q45588) Anti-sigma-W factor rsiW|
          Length = 208

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +3

Query: 162 CEECRKHFYDMCSSVSV 212
           CE+CRKHFY+M  S+++
Sbjct: 34  CEKCRKHFYEMEKSIAL 50

>PYRF_PASMU (Q9CMM1) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP|
           decarboxylase) (OMPDCase) (OMPdecase)
          Length = 233

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 183 FYDMCSSVSVPFKSARDLSLWLWSTHNKVNERLMKEEK 296
           F+D+ ++V+   +SA DL +W+   H     R+M+E K
Sbjct: 62  FHDIPNTVARAVRSAADLGVWMVDLHASGGLRMMEEAK 99

>MOK1_SCHPO (Q9USK8) Cell wall alpha-1,3-glucan synthase mok1 (EC 2.4.1.183)|
          Length = 2410

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 237  SLWLWSTHNKVNERLMKEEKDMGTGDPSFPKAIWPPKAL 353
            +LW W  H  +N+RL   E +     P+ P   WP  A+
Sbjct: 2126 ALWYWGAH--LNKRLTAGEANTFKMSPAIPSITWPLSAV 2162


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,908,916
Number of Sequences: 219361
Number of extensions: 1736933
Number of successful extensions: 4336
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4333
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)