ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26d19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 864 bits (436), Expect = 0.0 Identities = 491/511 (96%), Gaps = 3/511 (0%) Strand = Plus / Minus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||||| || Sbjct: 78616 tataataaaaataatagagaattaaaaattttaacttgaaacaagaactacaaatttaaa 78557 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78556 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 78497 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78496 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 78437 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78436 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 78377 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 78376 ggcggaacaaaccaaaaaaattgtcttatttggtaagtttataaattaacaaataagaca 78317 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78316 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 78257 Query: 361 aataagagtaaaaataaggatattttttagaaggactacattattatctataaatataga 420 ||||||||| ||||||||||| ||||| ||||||| ||| |||||||||||||||||| Sbjct: 78256 aataagagtcaaaataaggatttttttaagaaggattac---attatctataaatataga 78200 Query: 421 atttagataaatatccacacacatctggatatattctagatcttcttttttgactatata 480 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78199 atttagataaatatacacacacatctggatatattctagatcttcttttttgactatata 78140 Query: 481 ttatatttttctgttttaacaaattcaatat 511 ||||||||||||||||||||||||||||||| Sbjct: 78139 ttatatttttctgttttaacaaattcaatat 78109 Score = 65.9 bits (33), Expect = 1e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 531 aactttttctattatctattaatgngtatctatccg 566 |||||||||||||||||||||||| ||||||||||| Sbjct: 78097 aactttttctattatctattaatgtgtatctatccg 78062
>gb|DQ113928.1| Calamagrostis muiriana isolate B1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 666 bits (336), Expect = 0.0 Identities = 446/483 (92%), Gaps = 4/483 (0%) Strand = Plus / Minus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||||||||||| | |||| ||||||||||| |||||||| |||||| || Sbjct: 491 tataataaaaataatagagaattagaaatcgtaacttgaaacaagaactagaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattt 372 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 371 tttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgac 312 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 311 agaacctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggat 252 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 251 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagaca 192 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 191 ggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattc 132 Query: 361 aataagagtaaaaataaggatattttttagaaggactacattattatctat-aaatatag 419 |||||||||||||||||||||||||||| ||||| ||| || |||||| |||||||| Sbjct: 131 aataagagtaaaaataaggatattttttttaaggattac---atcatctataaaatatag 75 Query: 420 aatttagataaatatccacacacatctggatatattctagatcttcttttttgactatat 479 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 74 aatttagataaatagacacacacatctagatatattctagatcttctttcttgactatat 15 Query: 480 att 482 ||| Sbjct: 14 att 12
>gb|DQ113934.1| Calamagrostis breweri isolate X17 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 650 bits (328), Expect = 0.0 Identities = 444/483 (91%), Gaps = 4/483 (0%) Strand = Plus / Minus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||| || Sbjct: 491 tataataaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattt 372 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 371 tttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgac 312 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 311 agaacctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggat 252 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 251 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagaca 192 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 191 ggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattc 132 Query: 361 aataagagtaaaaataaggatattttttagaaggactacattattatctat-aaatatag 419 |||||||||||||||||||||||||||| ||||| ||| || ||| || |||||||| Sbjct: 131 aataagagtaaaaataaggatattttttttaaggattac---atcatccataaaatatag 75 Query: 420 aatttagataaatatccacacacatctggatatattctagatcttcttttttgactatat 479 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 74 aatttagataaatagacacacacatctagatatattctagatcttctttcttgactatat 15 Query: 480 att 482 ||| Sbjct: 14 att 12
>gb|DQ113933.1| Calamagrostis breweri isolate RMP0198 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 650 bits (328), Expect = 0.0 Identities = 444/483 (91%), Gaps = 4/483 (0%) Strand = Plus / Minus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||| || Sbjct: 491 tataataaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattt 372 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 371 tttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgac 312 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 311 agaacctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggat 252 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 251 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagaca 192 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 191 ggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattc 132 Query: 361 aataagagtaaaaataaggatattttttagaaggactacattattatctat-aaatatag 419 |||||||||||||||||||||||||||| ||||| ||| || ||| || |||||||| Sbjct: 131 aataagagtaaaaataaggatattttttttaaggattac---atcatccataaaatatag 75 Query: 420 aatttagataaatatccacacacatctggatatattctagatcttcttttttgactatat 479 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 74 aatttagataaatagacacacacatctagatatattctagatcttctttcttgactatat 15 Query: 480 att 482 ||| Sbjct: 14 att 12
>gb|DQ113932.1| Calamagrostis breweri isolate BW8259 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 650 bits (328), Expect = 0.0 Identities = 444/483 (91%), Gaps = 4/483 (0%) Strand = Plus / Minus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||| || Sbjct: 491 tataataaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattt 372 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 371 tttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgac 312 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 311 agaacctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggat 252 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 251 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagaca 192 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 191 ggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattc 132 Query: 361 aataagagtaaaaataaggatattttttagaaggactacattattatctat-aaatatag 419 |||||||||||||||||||||||||||| ||||| ||| || ||| || |||||||| Sbjct: 131 aataagagtaaaaataaggatattttttttaaggattac---atcatccataaaatatag 75 Query: 420 aatttagataaatatccacacacatctggatatattctagatcttcttttttgactatat 479 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 74 aatttagataaatagacacacacatctagatatattctagatcttctttcttgactatat 15 Query: 480 att 482 ||| Sbjct: 14 att 12
>gb|DQ113931.1| Calamagrostis breweri isolate RMP0007 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 650 bits (328), Expect = 0.0 Identities = 444/483 (91%), Gaps = 4/483 (0%) Strand = Plus / Minus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||| || Sbjct: 491 tataataaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattt 372 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 371 tttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgac 312 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 311 agaacctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggat 252 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 251 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagaca 192 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 191 ggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattc 132 Query: 361 aataagagtaaaaataaggatattttttagaaggactacattattatctat-aaatatag 419 |||||||||||||||||||||||||||| ||||| ||| || ||| || |||||||| Sbjct: 131 aataagagtaaaaataaggatattttttttaaggattac---atcatccataaaatatag 75 Query: 420 aatttagataaatatccacacacatctggatatattctagatcttcttttttgactatat 479 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 74 aatttagataaatagacacacacatctagatatattctagatcttctttcttgactatat 15 Query: 480 att 482 ||| Sbjct: 14 att 12
>gb|DQ113930.1| Calamagrostis muiriana isolate B4 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 650 bits (328), Expect = 0.0 Identities = 444/483 (91%), Gaps = 4/483 (0%) Strand = Plus / Minus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||| || Sbjct: 491 tataataaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattt 372 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 371 tttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgac 312 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 311 agaacctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggat 252 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 251 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagaca 192 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 191 ggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattc 132 Query: 361 aataagagtaaaaataaggatattttttagaaggactacattattatctat-aaatatag 419 |||||||||||||||||||||||||||| ||||| ||| || ||| || |||||||| Sbjct: 131 aataagagtaaaaataaggatattttttttaaggattac---atcatccataaaatatag 75 Query: 420 aatttagataaatatccacacacatctggatatattctagatcttcttttttgactatat 479 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 74 aatttagataaatagacacacacatctagatatattctagatcttctttcttgactatat 15 Query: 480 att 482 ||| Sbjct: 14 att 12
>gb|DQ113929.1| Calamagrostis muiriana isolate B3 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 650 bits (328), Expect = 0.0 Identities = 444/483 (91%), Gaps = 4/483 (0%) Strand = Plus / Minus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||| || Sbjct: 491 tataataaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattt 372 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 371 tttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgac 312 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 311 agaacctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggat 252 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 251 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagaca 192 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 191 ggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattc 132 Query: 361 aataagagtaaaaataaggatattttttagaaggactacattattatctat-aaatatag 419 |||||||||||||||||||||||||||| ||||| ||| || ||| || |||||||| Sbjct: 131 aataagagtaaaaataaggatattttttttaaggattac---atcatccataaaatatag 75 Query: 420 aatttagataaatatccacacacatctggatatattctagatcttcttttttgactatat 479 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 74 aatttagataaatagacacacacatctagatatattctagatcttctttcttgactatat 15 Query: 480 att 482 ||| Sbjct: 14 att 12
>gb|DQ113927.1| Calamagrostis muiriana isolate A7 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 650 bits (328), Expect = 0.0 Identities = 444/483 (91%), Gaps = 4/483 (0%) Strand = Plus / Minus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||| || Sbjct: 491 tataataaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattt 372 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 371 tttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgac 312 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 311 agaacctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggat 252 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 251 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagaca 192 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 191 ggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttacctttattc 132 Query: 361 aataagagtaaaaataaggatattttttagaaggactacattattatctat-aaatatag 419 |||||||||||||||||||||||||||| ||||| ||| || ||| || |||||||| Sbjct: 131 aataagagtaaaaataaggatattttttttaaggattac---atcatccataaaatatag 75 Query: 420 aatttagataaatatccacacacatctggatatattctagatcttcttttttgactatat 479 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 74 aatttagataaatagacacacacatctagatatattctagatcttctttcttgactatat 15 Query: 480 att 482 ||| Sbjct: 14 att 12
>gb|DQ113926.1| Calamagrostis muiriana isolate A1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 650 bits (328), Expect = 0.0 Identities = 444/483 (91%), Gaps = 4/483 (0%) Strand = Plus / Minus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||||||||||| | |||| |||||||||| |||||||| |||||| || Sbjct: 491 tataataaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattt 372 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 371 tttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgac 312 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 311 agaacctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggat 252 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 251 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagaca 192 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 191 ggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttacctttattc 132 Query: 361 aataagagtaaaaataaggatattttttagaaggactacattattatctat-aaatatag 419 |||||||||||||||||||||||||||| ||||| ||| || ||| || |||||||| Sbjct: 131 aataagagtaaaaataaggatattttttttaaggattac---atcatccataaaatatag 75 Query: 420 aatttagataaatatccacacacatctggatatattctagatcttcttttttgactatat 479 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 74 aatttagataaatagacacacacatctagatatattctagatcttctttcttgactatat 15 Query: 480 att 482 ||| Sbjct: 14 att 12
>gb|AY847072.1| Melica altissima ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1139 Score = 593 bits (299), Expect = e-166 Identities = 433/477 (90%), Gaps = 6/477 (1%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||| ||| ||||| ||||||||| || Sbjct: 319 tataataaaaataagagagaattcgaaatcgtaacttaaaataagaagtacaaatttaaa 378 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| Sbjct: 379 gcaataataaagagccgccgcggttaataaaactgagaaaattaactcggaaaaacattt 438 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 | ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 439 taaggaagctccattgcgggattcagacctaaccattcagggagaagcagtgggaacgac 498 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 499 agaacctatgactccataggattttattgaaaagaatcctaatacttcattgggtgggat 558 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 559 ggcggaacaaaccaaaaaaattgtcttatttggtaagattataaattaacaaataagaca 618 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 619 ggaaagagtaaatattcgcccgcgaaatacttattgaattagaatactttaccgcgattc 678 Query: 361 aataagagtaaaaataa--ggatattttttagaaggactacattattatctataaatata 418 ||||||||||||||||| ||| ||||| ||||||| ||| |||||||||||| ||| Sbjct: 679 aataagagtaaaaataaatagatttttttaagaaggattac---attatctataaa-ata 734 Query: 419 gaatttagataaatatccacacacatctggatatattctagatcttcttttttgact 475 |||| |||||||||| || |||||||||||||||||||||||||||||| |||||| Sbjct: 735 gaatatagataaatagacatacacatctggatatattctagatcttctttcttgact 791 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 |||||||||||||||||||||||||| |||||||||| Sbjct: 829 cctaactttttctattatctattaatctgtatctatcc 866
>gb|AY847115.1| Streptogyna americana ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1160 Score = 589 bits (297), Expect = e-165 Identities = 461/516 (89%), Gaps = 14/516 (2%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| || ||||||||| Sbjct: 354 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaataaaaattttaa 413 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 414 gcaataataaagagcggcccgggttaataaaactgataaaattgactcggaaagaaattt 473 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 474 tttggaagctccattgcgggattcaaacctaaccattaaaggagaagcagtgggaacgac 533 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 534 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 593 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||| ||||||||||||| |||| ||||||||||||||||| Sbjct: 594 ggcggaacaaaccaaaaaaattgccttatttggtaaggttatgaattaacaaataagaca 653 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 654 ggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattc 713 Query: 361 aataagagtaaaaataaggatatttttt-----agaaggactacattattatctataaat 415 |||||||||||||||||||| ||||||| |||| || ||| |||||||||||| Sbjct: 714 aataagagtaaaaataaggagattttttttttaagaaagattac---attatctataaa- 769 Query: 416 atagaatttagataaatatccacacacatctggatatattctagatcttcttttttgact 475 ||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || ||| Sbjct: 770 atagaatatagataaataaacacacacatctagatatattctagatcttctttcttcact 829 Query: 476 atatattatatttttctgttttaacaaattcaatat 511 | ||||||||||| ||||||||||||| |||| Sbjct: 830 a-----tatatttttctattttaacaaattccatat 860 Score = 71.9 bits (36), Expect = 2e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| ||||||||||| Sbjct: 870 cctaactttttctattatctattaatgtgtatctatccg 908
>gb|AY847092.1| Arundoclaytonia dissimilis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 587 bits (296), Expect = e-164 Identities = 458/512 (89%), Gaps = 13/512 (2%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| |||||| |||| ||||| |||||||||||| Sbjct: 251 tataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaatacaaattttaa 310 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 311 gcaataataaagagcggcccgggttaagaaaactgagaaaattgactcggaaagaaattt 370 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 371 tttggaagctccattgtggaattcagacctaaccattaaaggagaagtagtgggaacgac 430 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 431 agaacctatgaatggataggattttattgaaaagaatcctaatacttcattgggtgggat 490 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||| Sbjct: 491 ggcggaacaaaccaaaaaaattgccttatttggtaaggttacaaattaacaaataagaca 550 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 551 ggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattc 610 Query: 361 aataagagtaaaaataaggatatttttt----agaaggactacattattatctataaata 416 |||||||||||||||||||| ||||||| ||||||| ||||||||| |||||| | Sbjct: 611 aataagagtaaaaataaggagatttttttaaaagaaggattacattatt---tataaa-a 666 Query: 417 tagaatttagataaatatccacacacatctggatatattctagatcttcttttttgacta 476 |||||| |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 667 tagaatatagataaatagacacacacatctagatatattctagatcttctttcttgacta 726 Query: 477 tatattatatttttctgttttaacaaattcaa 508 ||||||||||| ||||||||||||||| Sbjct: 727 -----tatatttttctattttaacaaattcaa 753 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 768 cctaactttttctattatctattaatgtgcatctatccg 806
>gb|AY912212.1| Sirochloa parvifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1217 Score = 587 bits (296), Expect = e-164 Identities = 463/520 (89%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 365 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 424 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 425 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 484 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 485 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 544 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 545 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 604 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 605 ggcggaacaaaccaaaataattgccttatttggtaaggttataatataaattaacaaata 664 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 665 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 724 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 725 gattcaataagagtaaaaataaggagattttttgttaagaaagattac---attatctat 781 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 782 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 841 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 842 gacta-----tatatttatctattttaacaaattcaatat 876 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 893 cctaactttttctattatctattaatgtgcatctatccg 931
>gb|AY912189.1| Arthrostylidium ecuadorense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 587 bits (296), Expect = e-164 Identities = 463/520 (89%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| |||||| |||| ||||| |||||||||||| Sbjct: 372 tataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaatacaaattttaa 431 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 432 gcaataataaagagcggcccgggttaagaaaactgagaaaattgactcggaaagaaattt 491 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 492 tttggaagctccattgtggaattcagacctaaccattaaaggagaagtagtgggaacgac 551 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 552 agaacctatgaatggataggattttattgaaaagaatcctaatacttcattgggtgggat 611 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 612 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 671 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 672 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 731 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||| Sbjct: 732 gattcaataagagtaaaaataaggagatttttttaaaagaaggattacattatt---tat 788 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 789 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 848 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||||||||| Sbjct: 849 gacta-----tatatttttctattttaacaaattcaatat 883 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 900 cctaactttttctattatctattaatgtgcatctatccg 938
>gb|AY847071.1| Glyceria striata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 585 bits (295), Expect = e-164 Identities = 459/513 (89%), Gaps = 11/513 (2%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||| ||| |||||||||||||| || Sbjct: 320 tataataaaaataagagagaattcgaaatcgtaacttaaaataagaactacaaattcaaa 379 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||||||| |||| |||||||||||||||||||||||||| | |||| Sbjct: 380 gcaataataaagagccgccgcagttagtaaaactgagaaaattaactcggaaacatattt 439 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 || ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 440 ttaggaagctccattgcgggattcagacctaaccattcagggagaagcagtgggaacgac 499 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 500 agaacctatgactccataggattttattaaaaagaatcctaatacttcattgggtgggat 559 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 560 ggcggaacaaaccaaaaaaattctcttatttggtaagcttataaattaacaaataagaca 619 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 620 ggaaagagtaaatattcgcccgcgaaatacttattgaattagaatactttaccgcgattc 679 Query: 361 aataagagtaaaaataaggatatttttt--agaaggactacattattatctataaatata 418 ||||||||||||||||| |||||||||| ||||||| ||| |||||||| ||| ||| Sbjct: 680 aataagagtaaaaataaagatatttttttaagaaggattac---attatctagaaa-ata 735 Query: 419 gaatttagataaatatccacacacatctggatatattctagatcttcttttttgactata 478 |||| |||||||||| || |||||||| |||||||||| |||||||||| ||||||| Sbjct: 736 gaatatagataaatagacatacacatctagatatattctggatcttctttcttgacta-- 793 Query: 479 tattatatttttctgttttaacaaattcaatat 511 ||||||||||| |||||||||||||||||| Sbjct: 794 ---tatatttttctattttaacaaattcaatat 823 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||||||||||||||||||||||| ||||||||||| Sbjct: 832 cctaactttttctattatctattaatccgtatctatccg 870
>gb|AY912213.1| Valiha diffusa ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1163 Score = 579 bits (292), Expect = e-162 Identities = 462/520 (88%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| |||||||||||| Sbjct: 364 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaattttaa 423 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 424 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 483 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 484 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 543 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 544 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 603 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 604 ggcggaacaaaccaaaataattgccttatttggtaaggttataatataaattaacaaata 663 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 664 agacaggaaagagttaatattcgcccgcgaaatctttattgaattagaatactttaccgc 723 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 724 gattcaataagagtaaaaataaggagattttttgttaagaaagattac---attatctat 780 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| | |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 781 aaatatagaatatggataaatagacacacacatctagatatattctagatcttctttctt 840 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 841 gacta-----tatatttatctattttaacaaattcaatat 875 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 885 cctaactttttctattatctattaatgtgcatctatccg 923
>gb|AY912202.1| Cathariostachys madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1085 Score = 579 bits (292), Expect = e-162 Identities = 462/520 (88%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 365 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 424 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 425 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 484 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 485 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 544 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 545 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 604 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| |||||||| |||| | |||||||||||||||| Sbjct: 605 ggcggaacaaaccaaaataattgccttatttgataaggttataatataaattaacaaata 664 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 665 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 724 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 725 gattcaataagagtaaaaataaggagattttttgttaagaaagattac---attatctat 781 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 782 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 841 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 842 gacta-----tatatttatctattttaacaaattcaatat 876 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 893 cctaactttttctattatctattaatgtgcatctatccg 931
>gb|AY912199.1| Cephalostachyum pergracile ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1226 Score = 579 bits (292), Expect = e-162 Identities = 462/520 (88%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 374 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 433 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 434 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 493 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 494 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 553 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 554 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 613 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 614 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 673 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 674 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattaaaatactttaccgc 733 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 734 gattcaataagagtaaaaataaggagattttttgttaagaaagattac---attatctat 790 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 791 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 850 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| |||||||||||||||||| Sbjct: 851 tacta-----tatatttttctattttaacaaattcaatat 885 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 902 cctaactttttctattatctattaatgtgcatctatccg 940
>gb|AY912193.1| Oxytenanthera abyssinica ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1222 Score = 579 bits (292), Expect = e-162 Identities = 462/520 (88%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 370 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 429 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 430 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 489 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 490 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 549 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 550 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 609 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 610 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 669 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 670 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 729 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || ||| |||||| || Sbjct: 730 gattcaataagagtaaaaataaggagattttttgttaagaaagattac---attatccat 786 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 787 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 846 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 847 gacta-----tatatttatctattttaacaaattcaatat 881 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 898 cctaactttttctattatctattaatgtgcatctatcc 935
>gb|AY912192.1| Bambusa vulgaris ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 579 bits (292), Expect = e-162 Identities = 462/520 (88%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 375 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 434 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 435 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 494 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 495 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 554 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 555 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 614 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 615 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 674 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 675 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 734 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || ||| |||||| || Sbjct: 735 gattcaataagagtaaaaataaggagattttttgttaagaaagattac---attatccat 791 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 792 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 851 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 852 gacta-----tatatttatctattttaacaaattcaatat 886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 903 cctaactttttctattatctattaatgtgcatctatcc 940
>gb|AF133461.1|AF133461 Buergersiochloa bambusoides ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1216 Score = 573 bits (289), Expect = e-160 Identities = 458/512 (89%), Gaps = 11/512 (2%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||||||||||||||| ||||| ||||||||| || Sbjct: 390 tataataaaaataacagagaattcgaaattgtaacttgaaacaagaaatacaaatttaaa 449 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||| Sbjct: 450 gcaataataaagagcagctcgggttaataaaactgagaaaattgactcggaaagaaattt 509 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 510 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 569 Query: 181 agaacctatgattccatagga-ttttattgaaaagaatcctaacacttcattgggtggga 239 ||||||||||| | ||||||| |||| ||||||||||| |||| |||||||||||||||| Sbjct: 570 agaacctatgactacataggattttttttgaaaagaattctaatacttcattgggtggga 629 Query: 240 tggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagac 299 |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||| Sbjct: 630 tggcggaacaaaccaaaaaaattgccttatttggtaaggttataaattaacaaataagac 689 Query: 300 aggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgatt 359 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 690 aggaaagagtaaatattcgcccgcgaaatccttattgaattagaatactttaccgcgatt 749 Query: 360 caataagagtaaaaataaggatattttttagaaggactacattattatctataaatatag 419 |||||||||| |||||||||| ||||||| | | |||||| |||||||||||||| Sbjct: 750 caataagagt-aaaataaggagattttttttta-taatacatt---atctataaatatag 804 Query: 420 aatttagataaatatccacacacatctggatatattctagatcttcttttttgactatat 479 ||| |||||||||| ||||||||||| |||||||||| |||||||||| ||||||| Sbjct: 805 aatatagataaatagacacacacatctagatatattctggatcttctttcttgacta--- 861 Query: 480 attatatttttctgttttaacaaattcaatat 511 ||||||||||| |||||||||||||||||| Sbjct: 862 --tatatttttctattttaacaaattcaatat 891 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| ||||||||| Sbjct: 906 cctaactttttctattatctattaatgtacatctatccg 944
>gb|AY912207.1| Nastus borbonicus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1219 Score = 571 bits (288), Expect = e-160 Identities = 461/520 (88%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||| ||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 374 tatattaaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 433 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 434 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 493 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 494 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 553 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 554 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 613 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 614 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 673 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 674 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 733 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 734 gattcaataagagtaaaaataaggagattttttgttaagaaagattac---attatctat 790 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 |||||| |||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 791 aaatatggaatatagataaatagacacacacatctagatatattctagatcttctttctt 850 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 851 gacta-----tatatttatctattttaacaaattcaatat 885 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 895 cctaactttttctattatctattaatgtgcatctatccg 933
>gb|AY912211.1| Perrierbambus madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1214 Score = 565 bits (285), Expect = e-158 Identities = 463/524 (88%), Gaps = 18/524 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| |||||||||| | Sbjct: 356 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaattttta 415 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 416 aaaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 475 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 476 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 535 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 536 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 595 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 596 ggcggaacaaaccaaaataattgccttatttggtaaggttataatataaattaacaaata 655 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 656 agacaggaaagagtaaatattcgcccgggaaatctttattgaattagaatactttaccgc 715 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacat----tattat 407 ||||||||||||||||||||||||| ||||||| |||| || ||||| ||| || Sbjct: 716 gattcaataagagtaaaaataaggagattttttgttaagaaagattacattatctataat 775 Query: 408 ctataaatatagaatttagataaatatccacacacatctggatatattctagatcttctt 467 ||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 776 ctataaatatagaatatagataaatagacacacacatctagatatattctagatcttctt 835 Query: 468 ttttgactatatattatatttttctgttttaacaaattcaatat 511 | ||||||| ||||||| ||| |||||||||||||||||| Sbjct: 836 tcttgacta-----tatatttatctattttaacaaattcaatat 874 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 891 cctaactttttctattatctattaatgtgcatctatccg 929
>gb|AY912214.1| Temburongia simplex ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1075 Score = 563 bits (284), Expect = e-157 Identities = 460/520 (88%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| |||||||||||| Sbjct: 272 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaattttaa 331 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 332 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 391 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 392 tttggaagctccattgtggaattcagacctaaccattaaaggagaagtagtgggaacgac 451 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 452 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 511 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| || ||||||||||||| | |||||||||||||||| Sbjct: 512 ggcggaacaaaccaaaaaaatttccttatttggtaaggttataatataaattaacaaata 571 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 572 agacaggaaagagtaattattcgcccgcgaaatctttattgaattagaatactttaccgc 631 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||||||| |||||| ||||||| |||| || ||| ||||||||| Sbjct: 632 gattcaataagagtaaaattaaggagattttttgttaagaaagattac---attatctat 688 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 689 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 748 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 749 gacta-----tatatttatctattttaacaaattcaatat 783 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 800 cctaactttttctattatctattaatgtgcatctatccg 838
>gb|AY912208.1| Nastus elegantissimus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 563 bits (284), Expect = e-157 Identities = 460/520 (88%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 373 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 433 acaataataaagagcggcccgggttaataaaactgataaaattgactcggaaagaaattt 492 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| ||||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 493 tttggaagctccattgtgggattcagacctaatcattaaaggagaagtagtgggaacgac 552 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 553 agaacctatgactgcacaggattttattgaaaagaatcctaatacttcattgggtgggat 612 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 613 ggcggaacaaaccaaaaaaattgccttatttggtaaggttttaatataaattaacaaata 672 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 673 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 732 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 733 gattcaataagagtaaaaataaggagattttttgttaagaaagattac---attatctat 789 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 790 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 849 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 850 gacta-----tatatttatctattttaacaaattcaatat 884 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 901 cctaactttttctattatctattaatgtgcatctatccg 939
>gb|AY912206.1| Hickelia madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1108 Score = 557 bits (281), Expect = e-155 Identities = 415/461 (90%), Gaps = 12/461 (2%) Strand = Plus / Plus Query: 31 gtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataa 90 ||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||| Sbjct: 400 gtaacttgaaacaagaaatacaaatttaaaacaataataaagagccgcccgggttaataa 459 Query: 91 aactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacct 150 ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 460 aactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattcagacct 519 Query: 151 aaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattga 210 ||||||| ||||||||| ||||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 520 aaccattaaaggagaagtagtgggaacgacaaaacctatgactgcataggattttcttga 579 Query: 211 aaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatt 270 |||||||||||| |||||||||||||||||||||||||||||| ||| |||||| Sbjct: 580 aaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatt 639 Query: 271 tggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 ||||||| | |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 640 tggtaaggttataatataaattaacaaataagacaggaaagagtaaattttcgcccgcga 699 Query: 326 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataaggatattt 385 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 700 aatctttattgaattagaatactttaccgcgattcaataagagtaaaaataaggagattt 759 Query: 386 ttt----agaaggactacattattatctataaatatagaatttagataaatatccacaca 441 ||| |||| || ||| |||||||||||||||||||| |||||||||| |||||| Sbjct: 760 tttgttaagaaagattac---attatctataaatatagaatatagataaatagacacaca 816 Query: 442 catctggatatattctagatcttcttttttgactatatatt 482 ||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 817 catctagatatattctagatcttctttcttgactatatatt 857 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 898 cctaactttttctattatctattaatgtgcatctatccg 936
>gb|AF133469.1|AF133469 Nastus elatus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 557 bits (281), Expect = e-155 Identities = 460/520 (88%), Gaps = 19/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 396 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 455 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 456 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 515 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| ||||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 516 tttggaagctccattgtgggattcagacctaatcattaaaggagaagtagtgggaacgac 575 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 576 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 635 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 636 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 695 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 696 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 755 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||| |||||||||| ||||||| |||| || |||| ||||||| Sbjct: 756 gattcaataagagt-aaaataaggagattttttgttaagaaagattaca----tatctat 810 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 811 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 870 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 871 gacta-----tatatttatctattttaacaaattcaatat 905 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||| ||||||||||| | ||||||||| Sbjct: 922 cctaactttttctat-atctattaatgtgcatctatccg 959
>gb|U54746.1|NEU54746 Nastus elatus ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1071 Score = 557 bits (281), Expect = e-155 Identities = 460/520 (88%), Gaps = 19/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 373 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 433 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 492 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| ||||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 493 tttggaagctccattgtgggattcagacctaatcattaaaggagaagtagtgggaacgac 552 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 553 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 612 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 613 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 672 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 673 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 732 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||| |||||||||| ||||||| |||| || |||| ||||||| Sbjct: 733 gattcaataagagt-aaaataaggagattttttgttaagaaagattaca----tatctat 787 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 788 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 847 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 848 gacta-----tatatttatctattttaacaaattcaatat 882 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||| ||||||||||| | ||||||||| Sbjct: 899 cctaactttttctat-atctattaatgtgcatctatccg 936
>gb|AY912203.1| Decaryochloa diadelpha ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1173 Score = 555 bits (280), Expect = e-155 Identities = 459/520 (88%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| |||||||| || Sbjct: 372 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaattgaaa 431 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 432 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 491 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 492 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 551 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 552 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 611 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttat-----aaattaacaaata 295 ||||||||||||| ||| ||||||||||||| |||| ||||||||||||| Sbjct: 612 ggcggaacaaaccaaaataattgccttatttggtaaggttataataaaaattaacaaata 671 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 672 agacaggaaagagtcaatattcgcccgcgaaatctttattgaattagaatactttaccgc 731 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 732 gattcaataagagtaaaaataaggagattttttgttaagaaagattac---attatctat 788 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||| || Sbjct: 789 aaatatagaatatagataaatagacacacacatctagatatattctggatcttctttctt 848 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||| ||| |||||||||||||||||| Sbjct: 849 tacta-----tatatttatctattttaacaaattcaatat 883 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 900 cctaactttttctattatctattaatgtgcatctatccg 938
>gb|AF133471.1|AF133471 Glaziophyton mirabile ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 555 bits (280), Expect = e-155 Identities = 441/495 (89%), Gaps = 19/495 (3%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| |||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 418 aaatcgtaactcgaaacaagaaatacaaattttaagcaataataaagagcggcccgggtt 477 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| ||| || ||| | Sbjct: 478 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtggaattaa 537 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 538 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 597 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 598 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 657 Query: 266 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 320 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 717 Query: 321 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 718 cgcgaaatccttattgaattagaatactttaccgcgattcaataagag-caaaataagga 776 Query: 381 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 436 ||||||| |||| || |||| |||||||||||||||||| |||||||||| | Sbjct: 777 gatttttttttaagaaagattaca----tatctataaatatagaatatagataaatagac 832 Query: 437 acacacatctggatatattctagatcttcttttttgactatatattatatttttctgttt 496 |||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||| Sbjct: 833 acacacatctagatatattctagatcttctttcttgacta-----tatatttttctattt 887 Query: 497 taacaaattcaatat 511 ||||||||||||||| Sbjct: 888 taacaaattcaatat 902 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||| ||||||||||| | ||||||||| Sbjct: 919 cctaactttttctat-atctattaatgtgcatctatccg 956
>gb|U54748.1|GMU54748 Glaziophyton mirabile ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1068 Score = 555 bits (280), Expect = e-155 Identities = 441/495 (89%), Gaps = 19/495 (3%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| |||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 395 aaatcgtaactcgaaacaagaaatacaaattttaagcaataataaagagcggcccgggtt 454 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| ||| || ||| | Sbjct: 455 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtggaattaa 514 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 515 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 574 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 575 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 634 Query: 266 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 320 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 694 Query: 321 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 cgcgaaatccttattgaattagaatactttaccgcgattcaataagag-caaaataagga 753 Query: 381 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 436 ||||||| |||| || |||| |||||||||||||||||| |||||||||| | Sbjct: 754 gatttttttttaagaaagattaca----tatctataaatatagaatatagataaatagac 809 Query: 437 acacacatctggatatattctagatcttcttttttgactatatattatatttttctgttt 496 |||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||| Sbjct: 810 acacacatctagatatattctagatcttctttcttgacta-----tatatttttctattt 864 Query: 497 taacaaattcaatat 511 ||||||||||||||| Sbjct: 865 taacaaattcaatat 879 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||| ||||||||||| | ||||||||| Sbjct: 896 cctaactttttctat-atctattaatgtgcatctatccg 933
>gb|AF133470.1|AF133470 Bambusa longispiculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1206 Score = 549 bits (277), Expect = e-153 Identities = 459/520 (88%), Gaps = 19/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 391 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 450 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 451 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 510 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 511 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 570 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 571 agaacctatgactgcataggatttaattgaaaagaatcctaatacttcattgggtgggat 630 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||||||||||||||||| | |||||||||||||||| Sbjct: 631 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataatataaattaacaaata 690 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 691 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatacttaaccgc 750 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||| |||||||||| ||||||| |||| || ||| ||||| || Sbjct: 751 gattcaataagagt-aaaataaggagattttttgttaagaaagattac----ttatccat 805 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 806 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 865 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 866 gacta-----tatatttatctattttaacaaattcaatat 900 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||| ||||||||||| | |||||||| Sbjct: 917 cctaactttttctat-atctattaatgtgcatctatcc 953
>gb|U54745.1|BLU54745 Bambusa longispiculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 549 bits (277), Expect = e-153 Identities = 459/520 (88%), Gaps = 19/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 368 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 427 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 428 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 487 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 488 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 547 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 548 agaacctatgactgcataggatttaattgaaaagaatcctaatacttcattgggtgggat 607 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||||||||||||||||| | |||||||||||||||| Sbjct: 608 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataatataaattaacaaata 667 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 668 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatacttaaccgc 727 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||| |||||||||| ||||||| |||| || ||| ||||| || Sbjct: 728 gattcaataagagt-aaaataaggagattttttgttaagaaagattac----ttatccat 782 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 783 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 842 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 843 gacta-----tatatttatctattttaacaaattcaatat 877
>gb|AF133468.1|AF133468 Schizostachyum luzonicum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 547 bits (276), Expect = e-152 Identities = 440/495 (88%), Gaps = 19/495 (3%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 422 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 481 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 482 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 541 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 542 gacctaatcattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 601 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 602 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 661 Query: 266 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 320 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 721 Query: 321 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 722 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagt-aaaataagga 780 Query: 381 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 436 ||||||| |||| || |||| |||||||||||||||||| |||||||||| | Sbjct: 781 gattttttgttaagaaagattaca----tatctataaatatagaatatagataaatagac 836 Query: 437 acacacatctggatatattctagatcttcttttttgactatatattatatttttctgttt 496 |||||||||| ||||||||||||||||||||| ||||||| ||||||| ||| ||| Sbjct: 837 acacacatctagatatattctagatcttctttcttgacta-----tatatttatctattt 891 Query: 497 taacaaattcaatat 511 ||||||||||||||| Sbjct: 892 taacaaattcaatat 906 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||| ||||||||||| | ||||||||| Sbjct: 916 cctaactttttctat-atctattaatgtgcatctatccg 953
>gb|AF133465.1|AF133465 Arundinaria gigantea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 547 bits (276), Expect = e-152 Identities = 459/520 (88%), Gaps = 18/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| || || || ||||||||| Sbjct: 395 tataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaatagaaattttaa 454 Query: 61 gcaataataaa-----gagccgcccgggttaataaaactgagaaaattaactcggaaaga 115 ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 455 gcaataataaaataaagagcggcccgggttaataaaactgagaaaattgactcggaaaga 514 Query: 116 aattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtggga 175 ||||||| | ||||||| |||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 515 aatttttggaaagctccattgcgggattcagacctaaccattaaaggagaagtagtggga 574 Query: 176 acgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggt 235 |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| Sbjct: 575 acgacagaacctatgactgcataggattttattgaaaagaatcctaagacttcattgggt 634 Query: 236 gggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 295 |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| Sbjct: 635 gggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaattaacaaata 694 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 695 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttcccgc 754 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||| ||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 755 gattcaataagagt-caaataaggagatttttttttaagaaagattac---attatctat 810 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 811 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 870 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| ||| |||||||||||||| Sbjct: 871 gacta-----tatatttttctatttgaacaaattcaatat 905 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 915 cctaactttttctattatctattaatgtgcatctatcc 952
>gb|U54747.1|SLU54747 Schizostachyum luzonicum ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 547 bits (276), Expect = e-152 Identities = 440/495 (88%), Gaps = 19/495 (3%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 399 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 458 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 459 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 518 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 519 gacctaatcattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 578 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 579 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 638 Query: 266 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 320 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 698 Query: 321 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 699 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagt-aaaataagga 757 Query: 381 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 436 ||||||| |||| || |||| |||||||||||||||||| |||||||||| | Sbjct: 758 gattttttgttaagaaagattaca----tatctataaatatagaatatagataaatagac 813 Query: 437 acacacatctggatatattctagatcttcttttttgactatatattatatttttctgttt 496 |||||||||| ||||||||||||||||||||| ||||||| ||||||| ||| ||| Sbjct: 814 acacacatctagatatattctagatcttctttcttgacta-----tatatttatctattt 868 Query: 497 taacaaattcaatat 511 ||||||||||||||| Sbjct: 869 taacaaattcaatat 883 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||| ||||||||||| | ||||||||| Sbjct: 893 cctaactttttctat-atctattaatgtgcatctatccg 930
>gb|U54742.1|AGU54742 Arundinaria gigantea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 547 bits (276), Expect = e-152 Identities = 459/520 (88%), Gaps = 18/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| || || || ||||||||| Sbjct: 372 tataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaatagaaattttaa 431 Query: 61 gcaataataaa-----gagccgcccgggttaataaaactgagaaaattaactcggaaaga 115 ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 432 gcaataataaaataaagagcggcccgggttaataaaactgagaaaattgactcggaaaga 491 Query: 116 aattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtggga 175 ||||||| | ||||||| |||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 492 aatttttggaaagctccattgcgggattcagacctaaccattaaaggagaagtagtggga 551 Query: 176 acgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggt 235 |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| Sbjct: 552 acgacagaacctatgactgcataggattttattgaaaagaatcctaagacttcattgggt 611 Query: 236 gggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 295 |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| Sbjct: 612 gggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaattaacaaata 671 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 672 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttcccgc 731 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||| ||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 732 gattcaataagagt-caaataaggagatttttttttaagaaagattac---attatctat 787 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 788 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 847 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| ||| |||||||||||||| Sbjct: 848 gacta-----tatatttttctatttgaacaaattcaatat 882 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 892 cctaactttttctattatctattaatgtgcatctatcc 929
>gb|AY912216.1| Streptogyna americana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1172 Score = 545 bits (275), Expect = e-152 Identities = 462/526 (87%), Gaps = 23/526 (4%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| || ||||||||| Sbjct: 355 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaataaaaattttaa 414 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 415 gcaataataaagagcggcccgggttaataaaactgataaaattgactcggaaagaaattt 474 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 475 tttggaagctccattgcgggattcaaacctaaccattaaaggagaagcagtgggaacgac 534 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 535 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 594 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||| ||||||||||||| |||| ||||||||||||||||| Sbjct: 595 ggcggaacaaaccaaaaaaattgccttatttggtaaggttatgaattaacaaataagaca 654 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 655 ggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattc 714 Query: 361 aat-----aagag-----taaaaataaggatatttttt-----agaaggactacattatt 405 ||| ||||| |||||||||||| ||||||| |||| || ||||| | Sbjct: 715 aattcaataagagtaaaataaaaataaggagattttttttttaagaaagattacat---t 771 Query: 406 atctataaatatagaatttagataaatatccacacacatctggatatattctagatcttc 465 ||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| Sbjct: 772 atctataaatatagaatatagataaataaacacacacatctagatatattctagatcttc 831 Query: 466 ttttttgactatatattatatttttctgttttaacaaattcaatat 511 ||| || |||| ||||||||||| ||||||||||||| |||| Sbjct: 832 tttcttcacta-----tatatttttctattttaacaaattccatat 872 Score = 71.9 bits (36), Expect = 2e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| ||||||||||| Sbjct: 882 cctaactttttctattatctattaatgtgtatctatccg 920
>gb|AY912205.1| Greslania rivularis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1228 Score = 545 bits (275), Expect = e-152 Identities = 439/495 (88%), Gaps = 17/495 (3%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 402 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 461 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 462 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 521 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 522 gacctaatcattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 581 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| |||| ||||||||||||||||||||||||| ||| | Sbjct: 582 attgaaaagaatcctaatactttattgggtgggatggcggaacaaaccaaaaaaattgcc 641 Query: 266 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 320 ||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 ttatttgctaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 701 Query: 321 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 702 cgcgaaatctttattgaattagaatactttatcgcgattcaataagagtaaaaataagga 761 Query: 381 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 436 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 762 gattttttgttaagaaagattac---attatctataaatatagaatatagataaatagac 818 Query: 437 acacacatctggatatattctagatcttcttttttgactatatattatatttttctgttt 496 |||||||||| ||||||||||||||||||||| ||||||| ||||||| ||| ||| Sbjct: 819 acacacatctagatatattctagatcttctttcttgacta-----tatatttatctattt 873 Query: 497 taacaaattcaatat 511 ||||||||||||||| Sbjct: 874 taacaaattcaatat 888 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||| ||||||||||||||||||||| | ||||||||| Sbjct: 905 cctaattttttctattatctattaatgtgcatctatccg 943
>gb|AF133466.1|AF133466 Pseudosasa japonica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 541 bits (273), Expect = e-151 Identities = 458/520 (88%), Gaps = 18/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| || || || ||||||||| Sbjct: 395 tataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaatagaaattttaa 454 Query: 61 gcaataataaa-----gagccgcccgggttaataaaactgagaaaattaactcggaaaga 115 ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 455 gcaataataaaataaagagcggcccgggttaataaaactgagaaaattgactcggaaaga 514 Query: 116 aattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtggga 175 ||||||| | ||||||| |||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 515 aatttttggaaagctccattgcgggattcagacctaaccattaaaggagaagtagtggga 574 Query: 176 acgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggt 235 |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| Sbjct: 575 acgacagaacctatgactgcataggattttattgaaaagaatcctaagacttcattgggt 634 Query: 236 gggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 295 |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| Sbjct: 635 gggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaattaacaaata 694 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 695 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagantactttcccgc 754 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||| ||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 755 gattcaataagagt-caaataaggagatttttttttaagaaagattac---attatctat 810 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 811 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 870 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| ||| |||||||||||||| Sbjct: 871 gacta-----tatatttttctatttgaacaaattcaatat 905 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 915 cctaactttttctattatctattaatgtgcatctatcc 952
>gb|U54743.1|PJU54743 Pseudosasa japonica ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 541 bits (273), Expect = e-151 Identities = 458/520 (88%), Gaps = 18/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| || || || ||||||||| Sbjct: 372 tataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaatagaaattttaa 431 Query: 61 gcaataataaa-----gagccgcccgggttaataaaactgagaaaattaactcggaaaga 115 ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 432 gcaataataaaataaagagcggcccgggttaataaaactgagaaaattgactcggaaaga 491 Query: 116 aattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtggga 175 ||||||| | ||||||| |||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 492 aatttttggaaagctccattgcgggattcagacctaaccattaaaggagaagtagtggga 551 Query: 176 acgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggt 235 |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| Sbjct: 552 acgacagaacctatgactgcataggattttattgaaaagaatcctaagacttcattgggt 611 Query: 236 gggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 295 |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| Sbjct: 612 gggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaattaacaaata 671 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 672 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagantactttcccgc 731 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||| ||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 732 gattcaataagagt-caaataaggagatttttttttaagaaagattac---attatctat 787 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 788 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 847 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| ||| |||||||||||||| Sbjct: 848 gacta-----tatatttttctatttgaacaaattcaatat 882 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 892 cctaactttttctattatctattaatgtgcatctatcc 929
>gb|AF133467.1|AF133467 Phyllostachys pubescens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1232 Score = 539 bits (272), Expect = e-150 Identities = 458/520 (88%), Gaps = 18/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| || || || ||||||||| Sbjct: 395 tataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaatagaaattttaa 454 Query: 61 gcaataataaa-----gagccgcccgggttaataaaactgagaaaattaactcggaaaga 115 ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 455 gcaataataaaataaagagcggcccgggttaataaaactgagaaaattgactcggaaaga 514 Query: 116 aattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtggga 175 ||||||| | ||||||| ||| |||||||||||||||||||| ||||||||| ||||||| Sbjct: 515 aatttttggaaagctccattgtgggattcagacctaaccattaaaggagaagtagtggga 574 Query: 176 acgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggt 235 |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| Sbjct: 575 acgacagaacctatgactgcataggattttattgaaaagaatcctaagacttcattgggt 634 Query: 236 gggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 295 |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| Sbjct: 635 gggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaattaacaaata 694 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 695 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttcccgc 754 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||| |||||||| ||||||| |||| || ||| ||||||||| Sbjct: 755 gattcaataagagt-cgaataaggagatttttttttaagaaagattac---attatctat 810 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 811 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 870 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||||||||| Sbjct: 871 gacta-----tatatttttctattttaacaaattcaatat 905 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 922 cctaactttttctattatctattaatgtgcatctatcc 959
>gb|U54744.1|PPU54744 Phyllostachys pubescens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1072 Score = 539 bits (272), Expect = e-150 Identities = 458/520 (88%), Gaps = 18/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| || || || ||||||||| Sbjct: 372 tataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaatagaaattttaa 431 Query: 61 gcaataataaa-----gagccgcccgggttaataaaactgagaaaattaactcggaaaga 115 ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 432 gcaataataaaataaagagcggcccgggttaataaaactgagaaaattgactcggaaaga 491 Query: 116 aattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtggga 175 ||||||| | ||||||| ||| |||||||||||||||||||| ||||||||| ||||||| Sbjct: 492 aatttttggaaagctccattgtgggattcagacctaaccattaaaggagaagtagtggga 551 Query: 176 acgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggt 235 |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| Sbjct: 552 acgacagaacctatgactgcataggattttattgaaaagaatcctaagacttcattgggt 611 Query: 236 gggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 295 |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| Sbjct: 612 gggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaattaacaaata 671 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 672 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttcccgc 731 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||| |||||||| ||||||| |||| || ||| ||||||||| Sbjct: 732 gattcaataagagt-cgaataaggagatttttttttaagaaagattac---attatctat 787 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 788 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 847 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||||||||| Sbjct: 848 gacta-----tatatttttctattttaacaaattcaatat 882 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 899 cctaactttttctattatctattaatgtgcatctatcc 936
>gb|AY912200.1| Schizostachyum brachycladum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 535 bits (270), Expect = e-149 Identities = 457/520 (87%), Gaps = 15/520 (2%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 373 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 432 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 433 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 492 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 493 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 552 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 553 agaacctatgactgcataggattttattgaaaagaatcataatacttcattgggtgggat 612 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 |||||||||| || ||| ||||||||||||| | ||||||||| |||||| Sbjct: 613 ggcggaacaacccaaaaaaattgccttatttggtaaggttataatataaattagcaaata 672 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 673 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattaaaatactttaccgc 732 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || ||||||| | | ||| Sbjct: 733 gattcaataagagtaaaaataaggagattttttgttaagaaagattacatta-tctatat 791 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 | ||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 792 atatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 851 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| ||||||||||||||||| Sbjct: 852 tacta-----tatatttttctagtttaacaaattcaatat 886 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 903 cctaactttttctattatctattaatgtgcatctatccg 941
>gb|AY912209.1| Nastus elongatus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1098 Score = 533 bits (269), Expect = e-148 Identities = 456/520 (87%), Gaps = 23/520 (4%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 254 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 313 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 314 acaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 373 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 374 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgac 433 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 434 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 493 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 494 ggcggaacaaaccaaaataattgccttatttggtaaggttataatataaattaacaaata 553 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 554 agacaggaaagagtaaatattcgcccgcgaaatcttt------ttagaatactttaccgc 607 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||| | ||||||| |||| || ||| ||||||||| Sbjct: 608 gattcaataagagtaaaaataagaagattttttgttaagaaagattac---attatctat 664 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 665 aaatatagaatatagataaatagacacacacatctagatatattctagatcttctttctt 724 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||| ||| |||||||||||||||||| Sbjct: 725 gacta-----tatatttatctattttaacaaattcaatat 759 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 776 cctaactttttctattatctattaatgtgcatctatccg 814
>gb|AY912191.1| Aulonemia patula ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1186 Score = 533 bits (269), Expect = e-148 Identities = 456/520 (87%), Gaps = 17/520 (3%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| |||||| |||| ||||| |||||||||||| Sbjct: 342 tataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaatacaaattttaa 401 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||| || Sbjct: 402 gcaataataaagagcggcccgggttaagaaaactgagaaaattggctcggaaagaaactt 461 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || ||||||||||||||||| || |||||| |||||||||||| Sbjct: 462 tttggaagctccattgtggaattcagacctaaccattaaaagagaagtagtgggaacgac 521 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 522 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 581 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 |||||||||| || ||| ||||||||||||| | ||||||||| |||||| Sbjct: 582 ggcggaacaanccaaaaaaattgccttatttggtaaggttataatataaattagcaaata 641 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 || |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| Sbjct: 642 aggcaggaaagagtaaatattcgcccgcgaaatctttattgaattagaattctttcccgc 701 Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || ||| ||||||||| Sbjct: 702 gattcaataagagtaaaaataaggagatttttttttaagaaagattac---attatctat 758 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| || Sbjct: 759 aaatatagaatatagataaatagccacacacatctagatatattctagatcttctttctt 818 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||||||||| Sbjct: 819 gacta-----tatatttttctattttaacaaattcaatat 853 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 863 cctaactttttctattatctattaatgtgcatctatccg 901
>gb|AY912190.1| Atractantha radiata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1175 Score = 533 bits (269), Expect = e-148 Identities = 462/528 (87%), Gaps = 28/528 (5%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| |||||| |||| ||||| |||||||||||| Sbjct: 375 tataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaatacaaattttaa 434 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 435 gcaagaataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 494 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 495 tttggaagctccattgtggaattcagacctaaccattaaaggagaagtagtgggaacgac 554 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 555 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 614 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 615 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 674 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 675 agacaggaaagagtaaatattcgcccgcgaaat--ttattgaattagaatactttaccgc 732 Query: 356 gatt-----caataagagtaaaaataaggatatttttt-------agaaggactacatta 403 |||| ||||||||||||||||||||| ||||||| |||| || ||||| Sbjct: 733 gattcaatacaataagagtaaaaataaggagattttttttttttaagaaagattacat-- 790 Query: 404 ttatctataaatatagaatttagataaatatccacacacatctggatatattctagatct 463 |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||| Sbjct: 791 -tatctataaatatagaatatagataaatagacacacacatctagatatattctagatct 849 Query: 464 tcttttttgactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||| |||||||||||||||||| Sbjct: 850 tctttcttgactatata------ttttctattttaacaaattcaatat 891 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 908 cctaactttttctattatctattaatgtgcatctatccg 946
>gb|AF133487.1|AF133487 Puelia olyriformis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1217 Score = 513 bits (259), Expect = e-142 Identities = 348/380 (91%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| |||||| |||| ||||||||||| ||||| || |||||| || Sbjct: 397 tataataaaaataactgagaattcgaaatcgtaacttgaaacaagaaataaaaatttaaa 456 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 457 gcaataataaagagcggcccgggttaataaaactgagaaaattgactcggaaagaaattt 516 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 517 tttggaagctccattgcgggattcagacctaaccattaaaggagaagcagtgggaacgac 576 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 agaacctatgactgcataggattttattgaaaagaatcctaacacttcattgggtgggat 636 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| | | |||||||||||| |||| ||||||||||||||||| Sbjct: 637 ggcggaacaaaccaaaaaaatagctttatttggtaaggttatgaattaacaaataagaca 696 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 697 ggaaagagtaaatattcgcccgcgaaatctttattggattagaatactttaccgcgattc 756 Query: 361 aataagagtaaaaataagga 380 |||||||||||||||||||| Sbjct: 757 aataagagtaaaaataagga 776 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%), Gaps = 5/88 (5%) Strand = Plus / Plus Query: 424 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatatta 483 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| || Sbjct: 819 tagataaatagacacacacatctagatatattctagatcttctttcttgacta-----ta 873 Query: 484 tatttttctgttttaacaaattcaatat 511 ||||||||| ||||||||||| |||||| Sbjct: 874 tatttttctattttaacaaatccaatat 901 Score = 58.0 bits (29), Expect = 3e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 535 ttttctattatctattaatgngtatctatccg 566 |||||||||||||||||||| ||||||||||| Sbjct: 914 ttttctattatctattaatgtgtatctatccg 945
>gb|AF133460.1|AF133460 Streptogyna americana ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1228 Score = 488 bits (246), Expect = e-134 Identities = 332/363 (91%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 ||||| |||| ||| ||||||| |||| ||||||||||| ||||| || ||||||||| Sbjct: 395 tataaaaaaaataacagagaattcgaaatcgtaacttgaaacaagaaataaaaattttaa 454 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 455 gcaataataaagagcggcccgggttaataaaactgataaaattgactcggaaagaaattt 514 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 515 tttggaagctccattgcgggattcaaacctaaccattaaaggagaagcagtgggaacgac 574 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 575 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 634 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||| ||||||||||||| |||| ||||||||||||||||| Sbjct: 635 ggcggaacaaaccaaaaaaattggcttatttggtaaggttatgaattaacaaataagaca 694 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 695 ggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgcgattc 754 Query: 361 aat 363 ||| Sbjct: 755 aat 757 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%), Gaps = 5/101 (4%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| ||||||||||| || |||||||||||||||||| | Sbjct: 813 taaatatagaatatagataaataaacacacacatctagacatattctagatcttctttct 872 Query: 471 tgactatatattatatttttctgttttaacaaattcaatat 511 |||||| ||||||||||| ||||||||||||| |||| Sbjct: 873 tgacta-----tatatttttctattttaacaaattccatat 908 Score = 71.9 bits (36), Expect = 2e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| ||||||||||| Sbjct: 918 cctaactttttctattatctattaatgtgtatctatccg 956
>gb|AY912210.1| Nastus productus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1067 Score = 482 bits (243), Expect = e-133 Identities = 347/384 (90%), Gaps = 5/384 (1%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 368 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 427 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 428 acaataataaagagcggcccaggttaataaaactgagaaaattgactcggaaagaaattt 487 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| ||||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 488 tttggaagctccattgtgggattcagacctaatcattaaaggagaagtagtgggaacgac 547 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 548 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 607 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 608 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 667 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 668 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 727 Query: 356 gattcaataagagtaaaaataagg 379 |||||||||||||||||||||||| Sbjct: 728 gattcaataagagtaaaaataagg 751 Score = 121 bits (61), Expect = 3e-24 Identities = 97/109 (88%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 403 attatctataaatatagaatttagataaatatccacacacatctggatatattctagatc 462 |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||| Sbjct: 778 attatctataaatatagaatatagataaatagacacacacatctagatatattctagatc 837 Query: 463 ttcttttttgactatatattatatttttctgttttaacaaattcaatat 511 |||||| ||||||||||||| | ||| |||||||||||||||||| Sbjct: 838 ttctttcttgactatatatt-----tatctattttaacaaattcaatat 881 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 891 cctaactttttctattatctattaatgtgcatctatccg 929
>gb|AY847073.1| Danthonia spicata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1114 Score = 474 bits (239), Expect = e-130 Identities = 306/328 (93%), Gaps = 2/328 (0%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| ||||||||||| ||||||||||||||| || Sbjct: 309 tataataaaaataacagagaattcgaaatcgtaacttgaaacaagaactacaaatttaaa 368 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 428 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 tttggaagctccattgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 488 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 489 agaacctatgactccataggattttattgaaaagaatcctaatacttcattgggtgggat 548 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 549 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaaaaagaca 608 Query: 301 gg-aaagagtaaatattcgcccgcgaaa 327 || ||||||| ||||||||||||||||| Sbjct: 609 ggaaaagagt-aatattcgcccgcgaaa 635 Score = 91.7 bits (46), Expect = 2e-15 Identities = 142/173 (82%), Gaps = 22/173 (12%) Strand = Plus / Plus Query: 341 agaatactttaccgcgattcaataagagtaaaaataaggatatttttt-----agaagga 395 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 635 agaatactttaccgcgattcaataagagtaaaaataaggagattttttttttaagaagga 694 Query: 396 ctacattattatctataaatatagaatttagataaatatccacacacatctggatatatt 455 ||| |||||||||||| ||||||| ||||||||| ||||||||||| || Sbjct: 695 ttac---attatctataaa-atagaatatagataaatggacacacacatctaga------ 744 Query: 456 ctagatcttcttttttgactatatattatatttttctgttttaacaaattcaa 508 ||||||||||| ||||||| ||||||||||| ||||||||||||||| Sbjct: 745 --agatcttctttcttgacta-----tatatttttctattttaacaaattcaa 790 Score = 71.9 bits (36), Expect = 2e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| ||||||||||| Sbjct: 804 cctaactttttctattatctattaatgtgtatctatccg 842
>gb|AY912201.1| Cathariostachys capitata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1202 Score = 474 bits (239), Expect = e-130 Identities = 408/466 (87%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| ||||| | ||||||| ||||||||||||||||| ||||||||| Sbjct: 397 aaatcgtaacttgaaacaagaaatccaaatttaaagcaataataaagagcggcccgggtt 456 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 457 aataaacctgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 516 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 |||||| ||||| ||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 517 gacctatccattaaaggagaagtagtgggaacgacagaacctatgcctgcataggatttt 576 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| ||||||||||||||||||||||||||| || ||| | Sbjct: 577 attgaaaagaatcctaatacttcattgggtgggatggcggaacaanccaaaataattgcc 636 Query: 266 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 320 ||||||| |||| | |||| |||||||||| |||||||| |||||| ||||||||| Sbjct: 637 ttatttgataaggttatgatatagattaacaaatgagacaggagagagtagatattcgcc 696 Query: 321 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 |||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 697 cgcgaaatctttattgaattagaatacttgcccgcgattcaatcagagtaaaaataagga 756 Query: 381 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 436 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 757 gattttttgttaagaaagattac---attatctataaatatagaatatagataaatagac 813 Query: 437 acacacatctggatatattctagatcttcttttttgactatatatt 482 ||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 814 ccacacatctagatatattctagatcttctttcttgactatatatt 859 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 899 cctaactttttctattatctattaatgtgcatctatccg 937
>gb|AF133475.1|AF133475 Avena sativa ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1187 Score = 468 bits (236), Expect = e-128 Identities = 396/449 (88%), Gaps = 17/449 (3%) Strand = Plus / Plus Query: 31 gtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataa 90 ||||||||||| |||||||| |||||| |||||||||||||||||| || ||||||||| Sbjct: 379 gtaacttgaaacaagaactagaaatttaaagcaataataaagagccatcctggttaataa 438 Query: 91 aactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacct 150 ||||||||||||||||| |||||||||||||||||||||||| ||| || |||||||||| Sbjct: 439 aactgagaaaattaactgggaaagaaattttttggaagctccattgtggaattcagacct 498 Query: 151 aaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattga 210 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 aaccattcaaggagaggcagtgggaacgacagaacctatgattccataggattttattga 558 Query: 211 aaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatt 270 |||||||||||| |||||||||||| ||||||||||||||||| || ||||||| Sbjct: 559 aaagaatcctaatacttcattgggtaggatggcggaacaaaccaaaaaaattttcttatt 618 Query: 271 tggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattc 330 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 619 tggtaaggttataaattaacaaataagacagaaaagagtaaatattcgcccgcgaaatcc 678 Query: 331 ttattgaattagaatactttaccgcga------ttcaataagagtaaaaataaggatatt 384 || | ||||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 679 ttttaaaattagaatactttaccattaccattattcaataagagtaaaaataaagatatt 738 Query: 385 ttttagaaggactacattattatctataa-atatagaatttagataa-atatccacacac 442 || |||| |||| | ||||||| ||||||||||||||||| ||| ||||||| Sbjct: 739 tt----aagg-----attactctctataaaatatagaatttagataatatagacacacac 789 Query: 443 atctggatatattctagatcttctttttt 471 |||| |||||||||||||||||||||||| Sbjct: 790 atctagatatattctagatcttctttttt 818 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/71 (90%), Gaps = 4/71 (5%) Strand = Plus / Plus Query: 412 aaatatagaatttagataa-atatccacacacatctggatatattctagatcttcttttt 470 ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 758 aaatatagaatttagataatatagacacacacatctagatatattctagatcttcttttt 817 Query: 471 t---gactata 478 | ||||||| Sbjct: 818 ttttgactata 828
>gb|AY912204.1| Greslania circinata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1170 Score = 462 bits (233), Expect = e-127 Identities = 328/362 (90%), Gaps = 5/362 (1%) Strand = Plus / Plus Query: 32 taacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaa 91 |||||||||| ||||| ||||||||| || |||||| ||||||| | ||||||||||||| Sbjct: 428 taacttgaaacaagaaatacaaatttaaaacaataacaaagagcggaccgggttaataaa 487 Query: 92 actgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagaccta 151 |||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||||||| Sbjct: 488 actgagaaaattgactcggaaagaaatttattggaagctccattgtgggattcagaccta 547 Query: 152 accattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaa 211 | |||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 548 atcattaaaggagaagtagtgggaacgacagaacctatgactgcataggattttattgaa 607 Query: 212 aagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttattt 271 ||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 608 aagaatcctaatacttcattgggtgggatggcggaacaaaccaaaagaattgccttattt 667 Query: 272 ggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaa 326 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 ggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcccgcgaa 727 Query: 327 attcttattgaattagaatactttaccgcgattcaataagagtaaaaataaggatatttt 386 || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 728 atctttattgaattagaatactttaccgcgattcaataagagtaaaaataaggagatttt 787 Query: 387 tt 388 || Sbjct: 788 tt 789 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 847 cctaactttttctattatctattaatgtgcatctatccg 885
>gb|AF133473.1|AF133473 Otatea acuminata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1185 Score = 452 bits (228), Expect = e-124 Identities = 332/369 (89%), Gaps = 5/369 (1%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| |||||| |||| ||||| ||||||||| || Sbjct: 390 tataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaatacaaatttgaa 449 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 450 gcaataataaagagcggcccgggttaataaaactgagaaaattgacttggaaagaaattt 509 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 510 tttggaagctccattgtggaattcagacctaaccattaaaggagaagtagtgggaacgac 569 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 570 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 629 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 630 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 689 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 690 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 749 Query: 356 gattcaata 364 ||||||||| Sbjct: 750 gattcaata 758 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%), Gaps = 5/107 (4%) Strand = Plus / Plus Query: 405 tatctataaatatagaatttagataaatatccacacacatctggatatattctagatctt 464 |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 757 tatctataaatatagaatatagataaatagacacacacatctagatatattctagatctt 816 Query: 465 cttttttgactatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||| ||||||||||| |||||||||||||||||| Sbjct: 817 ctttcttgacta-----tatatttttctattttaacaaattcaatat 858 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 875 cctaactttttctattatctattaatgtgcatctatccg 913
>gb|U54749.1|OAU54749 Otatea acuminata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1025 Score = 452 bits (228), Expect = e-124 Identities = 332/369 (89%), Gaps = 5/369 (1%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||||||| |||| |||||| |||| ||||| ||||||||| || Sbjct: 367 tataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaatacaaatttgaa 426 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 427 gcaataataaagagcggcccgggttaataaaactgagaaaattgacttggaaagaaattt 486 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 487 tttggaagctccattgtggaattcagacctaaccattaaaggagaagtagtgggaacgac 546 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 547 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 606 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 607 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 666 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 667 agacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatactttaccgc 726 Query: 356 gattcaata 364 ||||||||| Sbjct: 727 gattcaata 735 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%), Gaps = 5/107 (4%) Strand = Plus / Plus Query: 405 tatctataaatatagaatttagataaatatccacacacatctggatatattctagatctt 464 |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 734 tatctataaatatagaatatagataaatagacacacacatctagatatattctagatctt 793 Query: 465 cttttttgactatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||| ||||||||||| |||||||||||||||||| Sbjct: 794 ctttcttgacta-----tatatttttctattttaacaaattcaatat 835 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 852 cctaactttttctattatctattaatgtgcatctatccg 890
>gb|AF133476.1|AF133476 Brachyelytrum erectum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1248 Score = 448 bits (226), Expect = e-123 Identities = 330/367 (89%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| ||| ||| |||| ||||||||||| ||||||||| ||||| || Sbjct: 396 tataataaaaataacagaaaattcgaaatcgtaacttgaaacaagaactactaatttaaa 455 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| | |||||||| |||||||||||||||| ||||||||| | |||| Sbjct: 456 gcaataataaagagcggtccgggttattaaaactgagaaaatttactcggaaatatattt 515 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| |||||||||| ||||||||||||| || ||||||||||||||||||| Sbjct: 516 tttggaagctccattgcgggattgagacctaaccattaaaagagaagcagtgggaacgac 575 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 576 agaacccatgactccataggattttattgaaaagaatcctaatacttcattggatgggat 635 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| Sbjct: 636 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataaattaacaaataagaca 695 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| |||||||||||||||||||||| | | |||| Sbjct: 696 ggaaagagtaaatattcgcccgcgaaatccttattgaattagaatactttaacccaattc 755 Query: 361 aataaga 367 ||||||| Sbjct: 756 aataaga 762 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 410 ataaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt 469 ||||||||||||| | |||||||| |||| |||| | ||||||||||| ||||||||| Sbjct: 805 ataaatatagaatatggataaatagacacaaacatttagatatattctaaatcttctttc 864 Query: 470 ttgactatatatt 482 ||||||||||||| Sbjct: 865 ttgactatatatt 877 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaa 552 ||||||||||||||||||||||||| Sbjct: 922 cctaactttttctattatctattaa 946 Score = 44.1 bits (22), Expect = 0.49 Identities = 30/33 (90%) Strand = Plus / Plus Query: 531 aactttttctattatctattaatgngtatctat 563 ||||||||||||||| |||||||| | |||||| Sbjct: 947 aactttttctattatatattaatgtgcatctat 979
>gb|AY847074.1| Merxmuellera macowanii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1077 Score = 444 bits (224), Expect = e-121 Identities = 316/349 (90%) Strand = Plus / Plus Query: 32 taacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaa 91 |||||||||| || || || |||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 398 taacttgaaacaataaataaaaatttaaagaaataataaagagcagcccgggttaataaa 457 Query: 92 actgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagaccta 151 |||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 458 actgagaaaattgactcggaaagaaattttttggaagctccattgcaggattcaaaccta 517 Query: 152 accattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaa 211 |||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| ||||| Sbjct: 518 accattaaaggagaagctgtgggaacgacaaaacctatgactgcataggattttcttgaa 577 Query: 212 aagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttattt 271 ||||||||||| |||||||||||||||||||||||||||||| ||| |||||| Sbjct: 578 aagaatcctaatacttcattgggtgggatggcggaacaaacccccaaaattgctttattt 637 Query: 272 ggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattct 331 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 638 ggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatctt 697 Query: 332 tattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 ||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 698 tattggattagaatactttaccatgattcaataagagtaaaaataagga 746
>gb|AF133485.1|AF133485 Arundo donax ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1207 Score = 438 bits (221), Expect = e-120 Identities = 292/318 (91%) Strand = Plus / Plus Query: 63 aataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttt 122 |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 474 aataataaggagcagcccgggttaataaaactgagaaaattgactcggaaagaaattttt 533 Query: 123 tggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacag 182 |||||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| Sbjct: 534 tggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaa 593 Query: 183 aacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatgg 242 ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 594 aacctatgactacataggattttattgaaaagaatcctaatacttcattgggtgggatgg 653 Query: 243 cggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacagg 302 ||||||||||| ||| |||||||||||| |||||||||||||||||||||||| Sbjct: 654 cggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaaataagacagg 713 Query: 303 aaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaa 362 |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| Sbjct: 714 aaagagtaaatattcgcccgcgaaatctttattggattagaatactttaccacgattcaa 773 Query: 363 taagagtaaaaataagga 380 |||||||||||||||||| Sbjct: 774 taagagtaaaaataagga 791 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatatt 482 ||||||||||||||||||||||| ||||||||||||| Sbjct: 839 tggatatattctagatcttctttcttgactatatatt 875
>gb|AF133484.1|AF133484 Phragmites australis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1199 Score = 432 bits (218), Expect = e-118 Identities = 292/319 (91%) Strand = Plus / Plus Query: 59 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 118 |||||||||||| |||| || ||||||||||||||||||||||| |||||||||||||| Sbjct: 459 aagcaataataaggagcaaccggggttaataaaactgagaaaattgactcggaaagaaat 518 Query: 119 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 178 |||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 519 tttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacg 578 Query: 179 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 238 ||| ||||||||| | |||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 579 acaaaacctatgactgcataggattttattcaaaagaatcctaatacttcattgggtggg 638 Query: 239 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 298 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 639 atggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataaga 698 Query: 299 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 358 |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| Sbjct: 699 caggaaagagtaaatattcgcccgcgaaatctttattggattagaatactttaccacgat 758 Query: 359 tcaataagagtaaaaataa 377 ||||||||||||||||||| Sbjct: 759 tcaataagagtaaaaataa 777 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 449 atatattctagatcttcttttttgactatatatt 482 |||||||||||||||||||| ||||||||||||| Sbjct: 830 atatattctagatcttctttcttgactatatatt 863
>gb|AF133474.1|AF133474 Poa pratensis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1097 Score = 432 bits (218), Expect = e-118 Identities = 338/381 (88%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||||||||||||||| | |||| ||||||||||| ||||||| |||||| || Sbjct: 403 tataataaaactaatagagaattagaaatcgtaacttgaaaaaagaactctaaatttaaa 462 Query: 61 gcaataataaaga-------gccgcccgggttaataaaactgagaaaattaactcggaaa 113 ||||||||||||| |||| |||| |||||||||||||||||||||||||||||| Sbjct: 463 gcaataataaagaataaagagccgaccggattaataaaactgagaaaattaactcggaaa 522 Query: 114 gaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgg 173 || ||||||| |||||||| ||| || ||| ||||||||||||||||||||||||||| Sbjct: 523 gatatttttttgaagctccattgtggaattagaacctaaccattcaaggagaagcagtgg 582 Query: 174 gaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgg 233 ||||||| |||||||||||| ||||||||||||| |||| |||||||| |||||||||| Sbjct: 583 gaacgacggaacctatgatttaataggattttatttaaaaaaatcctaatacttcattgg 642 Query: 234 gtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaa 293 ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||| Sbjct: 643 gtgggatggcggagcaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaa 702 Query: 294 taagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttacc 353 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 703 taagacaggaaagagtaaatattcgcccgcgaaatccttattgaattagaatactttacc 762 Query: 354 gcgattcaataagagtaaaaa 374 |||||||||||||||||| Sbjct: 763 attattcaataagagtaaaaa 783 Score = 69.9 bits (35), Expect = 9e-09 Identities = 37/38 (97%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| |||||||||| Sbjct: 787 cctaactttttctattatctattaatgtgtatctatcc 824
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 2122 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 2181 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 2182 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 2240 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 2241 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 2300 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 2301 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 2360 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2361 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 2420 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 2421 gaattagaatactttaccgcgattcaataagagtaaaa 2458
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 2122 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 2181 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 2182 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 2240 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 2241 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 2300 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 2301 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 2360 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2361 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 2420 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 2421 gaattagaatactttaccgcgattcaataagagtaaaa 2458
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 78792 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 78733 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 78732 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 78674 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 78673 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 78614 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 78613 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 78554 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78553 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 78494 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 78493 gaattagaatactttaccgcgattcaataagagtaaaa 78456 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78414 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78355 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 78354 tgactatatatt 78343
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 78792 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 78733 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 78732 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 78674 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 78673 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 78614 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 78613 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 78554 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78553 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 78494 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 78493 gaattagaatactttaccgcgattcaataagagtaaaa 78456 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78414 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78355 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 78354 tgactatatatt 78343
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 78735 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 78676 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 78675 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 78617 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 78616 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 78557 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 78556 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 78497 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78496 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 78437 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 78436 gaattagaatactttaccgcgattcaataagagtaaaa 78399 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78358 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78299 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 78298 tgactatatatt 78287
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 54798 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 54739 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 54738 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 54680 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 54679 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 54620 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 54619 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 54560 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 54559 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 54500 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 54499 gaattagaatactttaccgcgattcaataagagtaaaa 54462 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 54425 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 54366 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 54365 tgactatatatt 54354
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 127626 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 127567 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 127566 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 127508 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 127507 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 127448 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 127447 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 127388 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 127387 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 127328 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 127327 gaattagaatactttaccgcgattcaataagagtaaaa 127290 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 127253 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 127194 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 127193 tgactatatatt 127182
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 78780 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 78721 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 78720 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 78662 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 78661 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 78602 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 78601 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 78542 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78541 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 78482 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 78481 gaattagaatactttaccgcgattcaataagagtaaaa 78444 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78402 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78343 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 78342 tgactatatatt 78331
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 71962 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 72021 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 72022 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 72080 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 72081 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 72140 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 72141 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 72200 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 72201 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 72260 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 72261 gaattagaatactttaccgcgattcaataagagtaaaa 72298 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 72338 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 72397 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 72398 tgactatatatt 72409
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 76974 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 76915 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 76914 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 76856 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 76855 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 76796 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 76795 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 76736 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 76735 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 76676 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 76675 gaattagaatactttaccgcgattcaataagagtaaaa 76638 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 76603 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 76544 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 76543 tgactatatatt 76532
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 11038 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 10979 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 10978 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 10920 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 10919 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 10860 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 10859 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 10800 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10799 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 10740 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 10739 gaattagaatactttaccgcgattcaataagagtaaaa 10702 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10667 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10608 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 10607 tgactatatatt 10596
>gb|DQ289153.1| Oryza glumipatula F ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1110 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 424 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 483 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 484 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 542 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 543 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 602 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 603 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 662 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 663 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 722 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 723 gaattagaatactttaccgcgattcaataagagtaaaa 760 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 798 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 857 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 858 tgactatatatt 869
>gb|DQ289152.1| Oryza glumipatula E ribosomal protein L16 (ribosomal protein L16) gene, partial cds; chloroplast Length = 1109 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 423 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 482 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 483 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 541 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 542 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 601 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 602 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 661 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 662 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 721 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 722 gaattagaatactttaccgcgattcaataagagtaaaa 759 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 797 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 856 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 857 tgactatatatt 868
>gb|DQ289151.1| Oryza meridionalis D ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1112 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 423 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 482 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 483 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 541 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 542 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 601 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 602 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 661 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 662 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 721 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 722 gaattagaatactttaccgcgattcaataagagtaaaa 759 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 800 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 859 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 860 tgactatatatt 871
>gb|DQ289150.1| Oryza barthii C ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1106 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 422 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 481 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 482 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 540 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 541 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 600 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 601 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 660 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 661 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 720 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 721 gaattagaatactttaccgcgattcaataagagtaaaa 758 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 794 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 853 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 854 tgactatatatt 865
>gb|DQ289148.1| Oryza sativa A ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1113 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 423 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 482 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 483 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 541 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 542 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 601 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 602 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 661 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 662 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 721 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 722 gaattagaatactttaccgcgattcaataagagtaaaa 759 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 801 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 860 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 861 tgactatatatt 872
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 9190889 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 9190948 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 9190949 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 9191007 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 9191008 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 9191067 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 9191068 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 9191127 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9191128 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 9191187 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 9191188 gaattagaatactttaccgcgattcaataagagtaaaa 9191225 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 9113936 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 9113995 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 9113996 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 9114054 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 9114055 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 9114114 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 9114115 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 9114174 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9114175 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 9114234 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 9114235 gaattagaatactttaccgcgattcaataagagtaaaa 9114272 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9191265 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9191324 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 9191325 tgactatatatt 9191336 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9114312 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9114371 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 9114372 tgactatatatt 9114383
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 10370582 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 10370523 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 10370522 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 10370464 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 10370463 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 10370404 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 10370403 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 10370344 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10370343 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 10370284 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 10370283 gaattagaatactttaccgcgattcaataagagtaaaa 10370246 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10370211 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10370152 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 10370151 tgactatatatt 10370140
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 14454907 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 14454966 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 14454967 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 14455025 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 14455026 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 14455085 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 14455086 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 14455145 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14455146 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 14455205 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 14455206 gaattagaatactttaccgcgattcaataagagtaaaa 14455243 Score = 226 bits (114), Expect = 6e-56 Identities = 193/218 (88%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 11895112 ttgaaacaagaaatacaaatttcaaggaataacaaagagtgtcccgagttaataaaactg 11895171 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || ||| |||||||||||||||||||||||| ||| | |||| | ||||||||| Sbjct: 11895172 agaaa-ttgacttggaaagaaattttttggaagctccattgtgagattaaaacctaacca 11895230 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || |||||||||| |||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 11895231 ttaaaggagaagccgtgggaacgacagaacctatgactggataggattttcttgaaaaga 11895290 Query: 216 atcctaacacttcattgggtgggatggcggaacaaacc 253 |||| || |||||||||||||||||||||||||||||| Sbjct: 11895291 atcccaatacttcattgggtgggatggcggaacaaacc 11895328 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 287 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 346 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 11895349 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 11895408 Query: 347 ctttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||| Sbjct: 11895409 ctttaccgcgattcaataagagtaaaa 11895435 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 14455279 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 14455338 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 14455339 tgactatatatt 14455350 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 11895468 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 11895527 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 11895528 tgactatatatt 11895539
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 9258277 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 9258336 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 9258337 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 9258395 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 9258396 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 9258455 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 9258456 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 9258515 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9258516 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 9258575 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 9258576 gaattagaatactttaccgcgattcaataagagtaaaa 9258613 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9258647 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9258706 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 9258707 tgactatatatt 9258718
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 12757339 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 12757280 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 12757279 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 12757221 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 12757220 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 12757161 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 12757160 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 12757101 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 12757100 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 12757041 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 12757040 gaattagaatactttaccgcgattcaataagagtaaaa 12757003 Score = 369 bits (186), Expect = 7e-99 Identities = 302/339 (89%), Gaps = 3/339 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| || | ||||||||| ||| Sbjct: 19544245 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcctgagttaataaa-ctg 19544303 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 19544304 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 19544362 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || |||||||||||||||||| |||||||||||||| | |||||||||| ||||||| | Sbjct: 19544363 ttaaaggagaagcagtgggaatgacagaacctatgactggataggattttcttgaaaaaa 19544422 Query: 216 atcctaacacttcattgggtgggatggcggaacaaacc-nnnnnnnttgtcttatttggt 274 |||| || |||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 19544423 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaaattgtcttatttgat 19544482 Query: 275 aagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttat 334 ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 19544483 aaggttatgaattaacaaataagacatgaaagagtaaatattcgcccgcgaaatttttat 19544542 Query: 335 tgaattagaatactttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||||||||||||||| Sbjct: 19544543 tgaattagaatactttaccgcgattcaataagagtaaaa 19544581 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 12756966 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 12756907 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 12756906 tgactatatatt 12756895 Score = 81.8 bits (41), Expect = 2e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 469 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 19544614 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 19544673 Query: 470 ttgactatatatt 482 ||||||||||||| Sbjct: 19544674 ttgactatatatt 19544686
>gb|AF133458.1|AF133458 Leersia virginica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1209 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||||||||| ||||||| |||||||||||||||||| Sbjct: 411 ttgaaacaagaaatacaaatttcaagcaataacaaagagcgtcccgggttaataaaactg 470 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 471 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 529 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||| | Sbjct: 530 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaaa 589 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 ||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 590 gtcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 649 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 650 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 709 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 710 gaattagaatactttaccgcgattcaataagagtaaaa 747 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 403 attatctataaatatagaatttagataaatatccacacacatctggatatattctagatc 462 |||||||||||||||||||| |||||||||| || |||||||| ||||||||||||||| Sbjct: 787 attatctataaatatagaatatagataaataaacatacacatctagatatattctagatc 846 Query: 463 ttcttttttgactatatatt 482 |||||| ||||||||||||| Sbjct: 847 ttctttcttgactatatatt 866 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||| ||||||||||| |||||||||| ||||||||||| Sbjct: 899 cctagctttttctattttctattaatgtgtatctatccg 937
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 69490 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 69549 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 69550 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 69608 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 69609 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 69668 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 69669 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 69728 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 69729 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 69788 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 69789 gaattagaatactttaccgcgattcaataagagtaaaa 69826 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 69860 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 69919 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 69920 tgactatatatt 69931
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 146710 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 146769 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 146770 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 146828 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 146829 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 146888 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 146889 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 146948 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 146949 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 147008 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 147009 gaattagaatactttaccgcgattcaataagagtaaaa 147046 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 147082 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 147141 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 147142 tgactatatatt 147153
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 54472 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 54531 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 54532 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 54590 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 54591 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 54650 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 54651 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 54710 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 54711 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 54770 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 54771 gaattagaatactttaccgcgattcaataagagtaaaa 54808 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 54844 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 54903 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 54904 tgactatatatt 54915
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 2124 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 2183 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 2184 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 2242 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 2243 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 2302 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 2303 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 2362 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2363 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 2422 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 2423 gaattagaatactttaccgcgattcaataagagtaaaa 2460
>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full insert sequence Length = 1764 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 155 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 214 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 215 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 273 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 274 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 333 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 334 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 393 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 394 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 453 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 454 gaattagaatactttaccgcgattcaataagagtaaaa 491 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||| ||| || |||||||| ||||||||||||||| ||||| | Sbjct: 534 taaatatagaatatagatagataaacatacacatctagatatattctagatcctctttct 593 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 594 tgactatatatt 605
>dbj|AK059459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C07, full insert sequence Length = 352 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 1 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 60 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 61 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 119 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 120 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 179 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 180 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 239 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 240 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 299 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 300 gaattagaatactttaccgcgattcaataagagtaaaa 337
>gb|DQ289149.1| Oryza sativa ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1103 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 422 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 481 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 482 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 540 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 541 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 600 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 601 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 660 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 661 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 720 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 721 gaattagaatactttaccgcgattcaataagagtaaaa 758 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 791 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 850 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 851 tgactatatatt 862
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 10376621 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 10376562 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 10376561 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 10376503 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 10376502 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 10376443 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 10376442 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 10376383 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10376382 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 10376323 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 10376322 gaattagaatactttaccgcgattcaataagagtaaaa 10376285 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10376250 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10376191 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 10376190 tgactatatatt 10376179
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 78732 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 78673 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 78672 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 78614 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 78613 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 78554 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 78553 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 78494 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78493 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 78434 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 78433 gaattagaatactttaccgcgattcaataagagtaaaa 78396 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78358 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78299 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 78298 tgactatatatt 78287
>gb|AY847091.1| Gynerium sagittatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1184 Score = 428 bits (216), Expect = e-117 Identities = 315/349 (90%), Gaps = 1/349 (0%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||||||| Sbjct: 402 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagcccgggtt 461 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 462 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 521 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 522 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttt 581 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 |||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 582 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgct 641 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 ttatttggtaaggttctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 701 Query: 326 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 374 ||| ||||||| ||||||| |||||| | ||||||||||||| |||||| Sbjct: 702 aatccttattggattagaaaacttta-cacgattcaataagaataaaaa 749 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatatt 482 ||||||||||||||||||||||| || |||||||||| Sbjct: 802 tggatatattctagatcttctttctttactatatatt 838 Score = 54.0 bits (27), Expect = 5e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 |||||||||||||||||| |||| ||| |||||||||| Sbjct: 874 cctaactttttctattatatattgatgtgtatctatcc 911
>gb|DQ289157.1| Oryza punctata J ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1116 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 430 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 489 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 490 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 548 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 549 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 608 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 609 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgata 668 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 669 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 728 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 729 gaattagaatactttaccgcgattcaataagagtaaaa 766 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| | |||||||| ||||||||||||||| ||||| | Sbjct: 804 taaatatagaatatagataaataaagatacacatctagatatattctagatcctctttct 863 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 864 tgactatatatt 875
>gb|DQ289156.1| Oryza grandiglumis I ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 430 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 489 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 490 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 548 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 549 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 608 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 609 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgata 668 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 669 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 728 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 729 gaattagaatactttaccgcgattcaataagagtaaaa 766 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 805 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 864 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 865 tgactatatatt 876
>gb|DQ289155.1| Oryza latifolia H ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 429 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 488 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 489 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 547 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 548 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 607 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 608 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgata 667 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 668 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 727 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 728 gaattagaatactttaccgcgattcaataagagtaaaa 765 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 806 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 865 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 866 tgactatatatt 877
>gb|DQ289154.1| Oryza officinalis G ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 430 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 489 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 490 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 548 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 549 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 608 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 609 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgata 668 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 669 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 728 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 729 gaattagaatactttaccgcgattcaataagagtaaaa 766 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 806 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 865 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 866 tgactatatatt 877
>gb|AF133492.1|AF133492 Humbertochloa greenwayi ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1218 Score = 422 bits (213), Expect = e-115 Identities = 305/338 (90%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| |||||||| |||||||||| ||||||| ||||||||||||||||||| Sbjct: 432 ttgaaacaagaaatacaaattctaagcaataacaaagagcagcccgggttaataaaactg 491 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||||| ||||||||||| |||||||||||||||| ||||| |||||| ||||||||| Sbjct: 492 agaaaatggactcggaaagatattttttggaagctccattgcgagattcaaacctaacca 551 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || |||||||||| |||||||||||||||||||||| | |||||||||| ||||||| | Sbjct: 552 ttaaaggagaagctgtgggaacgacagaacctatgactggataggatttttttgaaaaca 611 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 ||||||| |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 612 atcctaatacttcattgggtgggatggcggaacaaaccaaaaaagttgccttatttgata 671 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 672 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttatt 731 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||| ||||||||||||||||||||||||||||| Sbjct: 732 gaattagagtactttaccgcgattcaataagagtaaaa 769 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||| | Sbjct: 811 taaatatagaatatagataaataaacacacacatctagatatattctagatcgtctttct 870 Query: 471 tgactata 478 || ||||| Sbjct: 871 tggctata 878 Score = 50.1 bits (25), Expect = 0.008 Identities = 30/32 (93%) Strand = Plus / Plus Query: 535 ttttctattatctattaatgngtatctatccg 566 ||||||| |||||||||||| ||||||||||| Sbjct: 921 ttttctagtatctattaatgtgtatctatccg 952
>dbj|AK104024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-E05, full insert sequence Length = 485 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||| | ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 148 ttgaaacaaggaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 207 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 208 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 266 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 267 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 326 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 327 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 386 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 387 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 446 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 447 gaattagaatactttaccgcgattcaataagagtaaaa 484
>dbj|AK058501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F04, full insert sequence Length = 547 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| |||| |||||||| Sbjct: 196 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttagtaaaactg 255 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 256 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 314 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 315 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 374 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 375 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 434 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 435 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 494 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 495 gaattagaatactttaccgcgattcaataagagtaaaa 532
>gb|AY847081.1| Phragmites australis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 416 bits (210), Expect = e-113 Identities = 291/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 59 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 118 |||||||||||| |||| || ||||||||||||||||||||||| |||||||||||||| Sbjct: 428 aagcaataataaggagcaaccggggttaataaaactgagaaaattgactcggaaagaaat 487 Query: 119 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 178 |||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 488 tttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacg 547 Query: 179 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 238 ||| ||||||||| | |||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 548 acaaaacctatgactgcataggattttattcaaaagaatcctaatacttcattgggtggg 607 Query: 239 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 298 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 608 atggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataaga 667 Query: 299 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 358 |||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 668 caggaaagagtaaatattcgcccgcgaaatctttattggattagaatacttta-cacgat 726 Query: 359 tcaataagagtaaaaataa 377 ||||||||||||||||||| Sbjct: 727 tcaataagagtaaaaataa 745 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 449 atatattctagatcttcttttttgactatatatt 482 |||||||||||||||||||| ||||||||||||| Sbjct: 797 atatattctagatcttctttcttgactatatatt 830
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 414 bits (209), Expect = e-112 Identities = 305/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| || |||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 2030 ttgaaacaagaaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactg 2089 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 2090 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 2148 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 2149 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 2208 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 2209 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 2268 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2269 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 2328 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 2329 gaattagaatactttaccgcgattcaataagagtaaaa 2366
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 414 bits (209), Expect = e-112 Identities = 305/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| || |||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 27924266 ttgaaacaagaaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactg 27924207 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 27924206 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 27924148 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 27924147 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 27924088 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 27924087 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 27924028 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 27924027 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 27923968 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 27923967 gaattagaatactttaccgcgattcaataagagtaaaa 27923930 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 27923897 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 27923838 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 27923837 tgactatatatt 27923826
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 414 bits (209), Expect = e-112 Identities = 305/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| || |||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 87624 ttgaaacaagaaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactg 87565 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 87564 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 87506 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 87505 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 87446 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 87445 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 87386 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 87385 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 87326 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 87325 gaattagaatactttaccgcgattcaataagagtaaaa 87288 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 87255 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 87196 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 87195 tgactatatatt 87184
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 414 bits (209), Expect = e-112 Identities = 305/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| || |||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 13600 ttgaaacaagaaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactg 13541 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 13540 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 13482 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 13481 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 13422 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 13421 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 13362 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 13361 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 13302 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||||||||||| Sbjct: 13301 gaattagaatactttaccgcgattcaataagagtaaaa 13264 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 13231 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 13172 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 13171 tgactatatatt 13160
>gb|AY847084.1| Pennisetum setaceum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1016 Score = 408 bits (206), Expect = e-111 Identities = 316/355 (89%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || | |||||| ||| ||||| ||||||| ||||| || Sbjct: 393 aaatcgtaacttgaaataaaaaatcaaaatttaaagaaataaaaaagagcagcccgcgtc 452 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 453 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 512 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||||| ||||||||| ||| ||||||| Sbjct: 513 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgacgacatcggatttt 572 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 |||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 573 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgct 632 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 ttatttgataagattctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 692 Query: 326 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 ||| ||||||| |||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 693 aatccttattggattagaatactttaccacgattcaataagaataaaaataagga 747
>gb|DQ289158.1| Oryza australiensis k ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 406 bits (205), Expect = e-110 Identities = 304/338 (89%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 433 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 492 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 493 agaaa-ttgactcggaaagaaattttttggaagctccattgcgaaattcaaacctaacca 551 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 552 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 611 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 |||| || |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 612 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgata 671 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 672 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 731 Query: 336 gaattagaatactttaccgcgattcaataagagtaaaa 373 |||||| ||||||||||||||||||||||||||||||| Sbjct: 732 gaattaaaatactttaccgcgattcaataagagtaaaa 769 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 805 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 864 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 865 tgactatatatt 876
>gb|AF133486.1|AF133486 Molinia caerulea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 406 bits (205), Expect = e-110 Identities = 291/322 (90%) Strand = Plus / Plus Query: 56 tttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaaga 115 ||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 458 tttaagcaataataaggagcaaccggggttaataaaactgagaaaattgactcggaaaga 517 Query: 116 aattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtggga 175 ||||||||||||||||| |||| | ||||| ||||||||||| |||||||||| |||||| Sbjct: 518 aattttttggaagctccattgcagaattcaaacctaaccattaaaggagaagctgtggga 577 Query: 176 acgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggt 235 |||||| ||||||||| | |||||||||||||||||||||||||||| |||||||||||| Sbjct: 578 acgacaaaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggt 637 Query: 236 gggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 295 |||||||||||||||||| ||| |||||||||||| ||||||||||||||||| Sbjct: 638 gggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaaata 697 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| | Sbjct: 698 agacaggaaagagtaaatattcgcccgcgaaatctttattggattaagatactttaccac 757 Query: 356 gattcaataagagtaaaaataa 377 |||||||||||||||||||||| Sbjct: 758 gattcaataagagtaaaaataa 779 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 449 atatattctagatcttcttttttgactatatatt 482 |||||||||||||||||||| ||||||||||||| Sbjct: 834 atatattctagatcttctttcttgactatatatt 867 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||||||||||||||| |||| ||| ||||||||||| Sbjct: 901 cctaactttttctattatatattgatgtgtatctatccg 939
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 1650 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 1592 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 1591 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 1532 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 1531 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 1472 Query: 229 attgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatta 288 ||||||||||||||||||||||||| ||| ||||||| |||| || ||||||| Sbjct: 1471 attgggtgggatggcggaacaaaccaaaaaaattgctttatttgataaggttctaaatta 1412 Query: 289 acaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatact 348 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 1411 acaaataagacaggaaagagtaaatattcgcccgcgaaatccttattggattagaatact 1352 Query: 349 ttaccgcgattcaataagagtaaaaataagga 380 ||||| ||||||||||||| |||||| ||||| Sbjct: 1351 ttaccacgattcaataagaataaaaaaaagga 1320 Score = 73.8 bits (37), Expect = 6e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 448 gatatattctagatcttcttttttgactatatattatatttttctgttttaacaaattca 507 ||||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct: 1273 gatatattctagatcttctttcttgactatatatt-tatttttcttttttaagaaagtca 1215 Query: 508 a 508 | Sbjct: 1214 a 1214 Score = 44.1 bits (22), Expect = 0.49 Identities = 33/37 (89%) Strand = Plus / Minus Query: 528 cctaactttttctattatctattaatgngtatctatc 564 |||||||||||||||||| |||| ||| ||| ||||| Sbjct: 1201 cctaactttttctattatatattgatgtgtacctatc 1165
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 81207 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 81149 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 81148 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 81089 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81088 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 81029 Query: 229 attgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatta 288 ||||||||||||||||||||||||| ||| ||||||| |||| || ||||||| Sbjct: 81028 attgggtgggatggcggaacaaaccaaaaaaattgctttatttgataaggttctaaatta 80969 Query: 289 acaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatact 348 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80968 acaaataagacaggaaagagtaaatattcgcccgcgaaatccttattggattagaatact 80909 Query: 349 ttaccgcgattcaataagagtaaaaataagga 380 ||||| ||||||||||||| |||||| ||||| Sbjct: 80908 ttaccacgattcaataagaataaaaaaaagga 80877 Score = 73.8 bits (37), Expect = 6e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 448 gatatattctagatcttcttttttgactatatattatatttttctgttttaacaaattca 507 ||||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct: 80830 gatatattctagatcttctttcttgactatatatt-tatttttcttttttaagaaagtca 80772 Query: 508 a 508 | Sbjct: 80771 a 80771 Score = 44.1 bits (22), Expect = 0.49 Identities = 33/37 (89%) Strand = Plus / Minus Query: 528 cctaactttttctattatctattaatgngtatctatc 564 |||||||||||||||||| |||| ||| ||| ||||| Sbjct: 80758 cctaactttttctattatatattgatgtgtacctatc 80722
>gb|U54750.1|RPU54750 Rhipidocladum pittieri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1010 Score = 402 bits (203), Expect = e-109 Identities = 316/356 (88%), Gaps = 5/356 (1%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| ||| || |||| |||| |||||| |||| ||||| || ||||||||| Sbjct: 371 tataataaaaataacagcgaattcgaaatcgtaactcgaaacaagaaatagaaattttaa 430 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 ||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct: 431 gcaataataaagagcgtccggggttaataaaactgagaaaattgactcggaaagaaattt 490 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| || ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 491 tttggaagctccattgtggaattcagacctaaccattaaaggagaagtagtgggaacgac 550 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 551 agaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtgggat 610 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaattaacaaata 295 ||||||||||||| ||| ||||||||||||| | |||||||||||||||| Sbjct: 611 ggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaattaacaaata 670 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttta 351 || |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 671 aggcaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatacttta 726 Score = 113 bits (57), Expect = 6e-22 Identities = 90/101 (89%), Gaps = 5/101 (4%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 725 taaatatagaatatagataaatagacacacacatctagatatattctagatcttctttct 784 Query: 471 tgactatatattatatttttctgttttaacaaattcaatat 511 |||||| ||||||||||| |||||||||||||||||| Sbjct: 785 tgacta-----tatatttttctattttaacaaattcaatat 820 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 837 cctaactttttctattatctattaatgtgcatctatccg 875
>gb|AY847095.1| Megastachya mucronata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1154 Score = 400 bits (202), Expect = e-108 Identities = 316/355 (89%), Gaps = 1/355 (0%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||| ||| || || || |||||| ||||||||| ||||||| ||| || || Sbjct: 395 aaatcgtaacttcaaacaataaataaaaatttaaagcaataaaaaagagcagccgggatt 454 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 455 aataaaactgagaaaattgactcggaaataaattttttggaagctccattgcaggattca 514 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 515 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttt 574 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 575 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtt 634 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 ttatttggtaaggttttaaattaacaaataagacaggaaagagtaaatattcgcccgcga 694 Query: 326 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 ||| |||||| |||||||||||||| | ||||||||||||| |||||| ||||| Sbjct: 695 aatctttattggattagaatacttta-cacgattcaataagaataaaaaaaagga 748 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactat 477 |||||||||||| |||||||||| |||||||| Sbjct: 788 tggatatattctggatcttctttcttgactat 819 Score = 42.1 bits (21), Expect = 1.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 531 aactttttctattatctattaatgngtatctatccg 566 ||||||||||||| | |||| ||| ||||||||||| Sbjct: 847 aactttttctattctatattgatgtgtatctatccg 882
>gb|AF133462.1|AF133462 Pariana radiciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1262 Score = 400 bits (202), Expect = e-108 Identities = 341/386 (88%), Gaps = 8/386 (2%) Strand = Plus / Plus Query: 7 aaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaata 66 |||| ||||||||||| |||| ||||||||||| ||||| ||||||||| |||||||| Sbjct: 406 aaaaataatagagaatttgaaatcgtaacttgaaacaagaaatacaaatttgaagcaata 465 Query: 67 ataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgga 126 ||||||||| || |||||||| ||||||||||||||| |||||||||||||||||||| | Sbjct: 466 ataaagagcagctcgggttaaaaaaactgagaaaattgactcggaaagaaattttttgaa 525 Query: 127 agctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacc 186 |||||| ||| |||||||||||||||||||| ||||||||| ||||||||||| ||| || Sbjct: 526 agctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgatagagcc 585 Query: 187 tatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgga 246 ||||| | ||||||||||| ||| ||||||| |||| ||||||||||||||||||||||| Sbjct: 586 tatgactgcataggatttttttggaaagaattctaatacttcattgggtgggatggcgga 645 Query: 247 acaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaag 306 ||||||| ||| |||||| |||| |||||||||||||||||||||||||||| Sbjct: 646 acaaaccaaaaaaattgncttatt---taaggttataaattaacaaataagacaggaaag 702 Query: 307 agtaaatattcgcccgcgaaattcttatt--gaatt--agaatactttaccgcgattcaa 362 |||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||| Sbjct: 703 agtaaatattcgcccgcgaaatccttattaagaattaaagaatactttaccgcgattcaa 762 Query: 363 taagagtaaaaataaggatatttttt 388 ||||||| ||||||||| ||||||| Sbjct: 763 taagagt-caaataaggagatttttt 787 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 402 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 461 ||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||| Sbjct: 807 tattatctataaatatagaatatagataaatagacacagacatctagatatattctagat 866 Query: 462 cttcttttttgactatatatt 482 ||||||| ||||||||||||| Sbjct: 867 cttctttcttgactatatatt 887
>gb|U54740.1|PRU54740 Pariana radiciflora ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1102 Score = 400 bits (202), Expect = e-108 Identities = 341/386 (88%), Gaps = 8/386 (2%) Strand = Plus / Plus Query: 7 aaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaata 66 |||| ||||||||||| |||| ||||||||||| ||||| ||||||||| |||||||| Sbjct: 383 aaaaataatagagaatttgaaatcgtaacttgaaacaagaaatacaaatttgaagcaata 442 Query: 67 ataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgga 126 ||||||||| || |||||||| ||||||||||||||| |||||||||||||||||||| | Sbjct: 443 ataaagagcagctcgggttaaaaaaactgagaaaattgactcggaaagaaattttttgaa 502 Query: 127 agctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacc 186 |||||| ||| |||||||||||||||||||| ||||||||| ||||||||||| ||| || Sbjct: 503 agctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgatagagcc 562 Query: 187 tatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgga 246 ||||| | ||||||||||| ||| ||||||| |||| ||||||||||||||||||||||| Sbjct: 563 tatgactgcataggatttttttggaaagaattctaatacttcattgggtgggatggcgga 622 Query: 247 acaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaag 306 ||||||| ||| |||||| |||| |||||||||||||||||||||||||||| Sbjct: 623 acaaaccaaaaaaattgncttatt---taaggttataaattaacaaataagacaggaaag 679 Query: 307 agtaaatattcgcccgcgaaattcttatt--gaatt--agaatactttaccgcgattcaa 362 |||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||| Sbjct: 680 agtaaatattcgcccgcgaaatccttattaagaattaaagaatactttaccgcgattcaa 739 Query: 363 taagagtaaaaataaggatatttttt 388 ||||||| ||||||||| ||||||| Sbjct: 740 taagagt-caaataaggagatttttt 764 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 402 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 461 ||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||| Sbjct: 784 tattatctataaatatagaatatagataaatagacacagacatctagatatattctagat 843 Query: 462 cttcttttttgactatatatt 482 ||||||| ||||||||||||| Sbjct: 844 cttctttcttgactatatatt 864
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 398 bits (201), Expect = e-108 Identities = 297/330 (90%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 44 agaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatt 103 |||| ||||||||| ||| ||||| ||||||| |||| |||||||||| ||||||| || Sbjct: 23180333 agaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaagtgagaaa-tt 23180391 Query: 104 aactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagga 163 |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||| Sbjct: 23180392 gactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaagga 23180451 Query: 164 gaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaac 223 |||||||||||||||||||||||||| | | |||||||||| ||||||||||||| || Sbjct: 23180452 gaagcagtgggaacgacagaacctattactggataggattttcttgaaaagaatcccaat 23180511 Query: 224 acttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttata 283 |||||||||||||||||||||||||||||| |||||||||| | |||| |||| Sbjct: 23180512 acttcattgggtgggatggcggaacaaaccaaaaaaattgtcttattcgataaggttatg 23180571 Query: 284 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 343 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 23180572 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattaga 23180631 Query: 344 atactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||| Sbjct: 23180632 atactttaccgcgattcaataagagtaaaa 23180661 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 23180694 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 23180753 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 23180754 tgactatatatt 23180765
>gb|AF133459.1|AF133459 Ehrharta calycina ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1192 Score = 398 bits (201), Expect = e-108 Identities = 299/334 (89%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 413 ttgaaacaagaaatacaaattttaagcaataataaagagcggtccgggttaataaaactg 472 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 | | |||| |||||||||||||||||||| ||||||| ||||| ||| | |||||| || Sbjct: 473 atagaattgactcggaaagaaattttttgaaagctccattgcgaaatttaaacctaatca 532 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || | |||||||| |||||||||||||||| |||| | ||||||||||||||||||||| Sbjct: 533 ttaagggagaagctgtgggaacgacagaactcatgactgcataggattttattgaaaaga 592 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 275 ||||||| |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 593 atcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 652 Query: 276 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 335 || |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 653 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatccttatt 712 Query: 336 gaattagaatactttaccgcgattcaataagagt 369 ||||||||||||||||||| ||||||||| |||| Sbjct: 713 gaattagaatactttaccgtgattcaataggagt 746 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattcta 458 |||||||||||| |||||||||| | ||||||||| ||||||||||| Sbjct: 789 taaatatagaatatagataaataaacgcacacatctagatatattcta 836 Score = 52.0 bits (26), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 534 tttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||| |||||||||| Sbjct: 878 tttttctattatctattaatgtctatctatccg 910
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 398 bits (201), Expect = e-108 Identities = 297/330 (90%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 44 agaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatt 103 |||| ||||||||| ||| ||||| ||||||| |||| |||||||||| ||||||| || Sbjct: 130981 agaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaagtgagaaa-tt 131039 Query: 104 aactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagga 163 |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||| Sbjct: 131040 gactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaagga 131099 Query: 164 gaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaac 223 |||||||||||||||||||||||||| | | |||||||||| ||||||||||||| || Sbjct: 131100 gaagcagtgggaacgacagaacctattactggataggattttcttgaaaagaatcccaat 131159 Query: 224 acttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttata 283 |||||||||||||||||||||||||||||| |||||||||| | |||| |||| Sbjct: 131160 acttcattgggtgggatggcggaacaaaccaaaaaaattgtcttattcgataaggttatg 131219 Query: 284 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 343 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131220 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattaga 131279 Query: 344 atactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||| Sbjct: 131280 atactttaccgcgattcaataagagtaaaa 131309 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 131342 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 131401 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 131402 tgactatatatt 131413
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 398 bits (201), Expect = e-108 Identities = 297/330 (90%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 44 agaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatt 103 |||| ||||||||| ||| ||||| ||||||| |||| |||||||||| ||||||| || Sbjct: 15095 agaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaagtgagaaa-tt 15153 Query: 104 aactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagga 163 |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||| Sbjct: 15154 gactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaagga 15213 Query: 164 gaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaac 223 |||||||||||||||||||||||||| | | |||||||||| ||||||||||||| || Sbjct: 15214 gaagcagtgggaacgacagaacctattactggataggattttcttgaaaagaatcccaat 15273 Query: 224 acttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttata 283 |||||||||||||||||||||||||||||| |||||||||| | |||| |||| Sbjct: 15274 acttcattgggtgggatggcggaacaaaccaaaaaaattgtcttattcgataaggttatg 15333 Query: 284 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 343 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 15334 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattaga 15393 Query: 344 atactttaccgcgattcaataagagtaaaa 373 |||||||||||||||||||||||||||||| Sbjct: 15394 atactttaccgcgattcaataagagtaaaa 15423 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 15456 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 15515 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 15516 tgactatatatt 15527
>gb|AF133463.1|AF133463 Sucrea maculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 396 bits (200), Expect = e-107 Identities = 340/388 (87%), Gaps = 7/388 (1%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||| ||| ||||||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 394 tataatcaaaataatagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 453 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||| |||| | || ||||||||||||||||||||| |||||||||||||||| Sbjct: 454 gcaataataaggagcaactcgagttaataaaactgagaaaattgactcggaaagaaattt 513 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 514 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgat 573 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | ||||| ||| | ||| || |||| |||||||||||| |||| Sbjct: 574 agaacctatgactgcatagaattcttttg------attctaatacttcattgggtaggat 627 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 628 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagaca 687 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||| Sbjct: 688 ggaaagagtaaatattcgcccgcgaaatccttattgaattagaatactttactgtgattc 747 Query: 361 aataagagtaaaaataaggatatttttt 388 ||||||||| ||||||||| ||||||| Sbjct: 748 aataagagt-caaataaggagatttttt 774 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%), Gaps = 5/88 (5%) Strand = Plus / Plus Query: 424 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatatta 483 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| || Sbjct: 804 tagataaatagacacacacatctagatatattctagatcttctttcttgacta-----ta 858 Query: 484 tatttttctgttttaacaaattcaatat 511 ||||||||| ||||||||||||| |||| Sbjct: 859 tatttttctattttaacaaattccatat 886
>gb|U54741.1|SMU54741 Sucrea maculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1030 Score = 396 bits (200), Expect = e-107 Identities = 340/388 (87%), Gaps = 7/388 (1%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||| ||| ||||||||||| |||| ||||||||||| ||||| ||||||||| || Sbjct: 354 tataatcaaaataatagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaa 413 Query: 61 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 120 |||||||||| |||| | || ||||||||||||||||||||| |||||||||||||||| Sbjct: 414 gcaataataaggagcaactcgagttaataaaactgagaaaattgactcggaaagaaattt 473 Query: 121 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 474 tttggaagctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgat 533 Query: 181 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 240 ||||||||||| | ||||| ||| | ||| || |||| |||||||||||| |||| Sbjct: 534 agaacctatgactgcatagaattcttttg------attctaatacttcattgggtaggat 587 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 588 ggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagaca 647 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||| Sbjct: 648 ggaaagagtaaatattcgcccgcgaaatccttattgaattagaatactttactgtgattc 707 Query: 361 aataagagtaaaaataaggatatttttt 388 ||||||||| ||||||||| ||||||| Sbjct: 708 aataagagt-caaataaggagatttttt 734 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%), Gaps = 5/88 (5%) Strand = Plus / Plus Query: 424 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatatta 483 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||| || Sbjct: 764 tagataaatagacacacacatctagatatattctagatcttctttcttgacta-----ta 818 Query: 484 tatttttctgttttaacaaattcaatat 511 ||||||||| ||||||||||||| |||| Sbjct: 819 tatttttctattttaacaaattccatat 846
>gb|AY847082.1| Andropogon gerardii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 392 bits (198), Expect = e-106 Identities = 316/355 (89%), Gaps = 2/355 (0%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||| | ||||||||| ||||||| ||| | ||| Sbjct: 402 aaatcgtaacttgaaacaacaaatataaatataaagcaataaaaaagagcagcc-gagtt 460 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 461 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 520 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 521 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactacataggatttt 580 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 |||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 581 attggaaagaatcctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgct 640 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 ttatttgataaggttctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 700 Query: 326 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 ||| ||||||| |||||||||||||| | ||||||||||||| |||||| ||||| Sbjct: 701 aatccttattggattagaatacttta-cacgattcaataagaataaaaaaaagga 754 Score = 69.9 bits (35), Expect = 9e-09 Identities = 57/63 (90%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatattatatttttctgttttaacaaatt 505 ||||||||||||||||||||||| ||||||||||||| | ||||||| |||||| ||| | Sbjct: 798 tggatatattctagatcttctttcttgactatatatt-tctttttcttttttaagaaagt 856 Query: 506 caa 508 ||| Sbjct: 857 caa 859
>gb|DQ289159.1| Oryza granulata L ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1142 Score = 392 bits (198), Expect = e-106 Identities = 307/343 (89%), Gaps = 7/343 (2%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||||||||| ||||||| |||||||||||||||||| Sbjct: 424 ttgaaacaagaaatacaaatttcaagcaataacaaagagcgtcccgggttaataaaactg 483 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 484 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 542 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 543 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 602 Query: 216 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtctta-----tt 270 |||| || |||||||| ||||||||||||||||||||| ||| |||| || Sbjct: 603 atcccaatacttcatt-ggtgggatggcggaacaaaccaaaaaaattgccttatttgatt 661 Query: 271 tggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattc 330 || |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 tgataaggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattt 721 Query: 331 ttattgaattagaatactttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 ttattgaattagaatactttaccgcgattcaataagagtaaaa 764 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || ||||| || ||||||||||||||||||||| | Sbjct: 821 taaatatagaatatagataaataaacatacacacctagatatattctagatcttctttct 880 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 881 tgactatatatt 892 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||||||||||||| |||||||||| ||||||||||| Sbjct: 926 cctaactttttctattttctattaatgtgtatctatccg 964
>gb|AY847088.1| Loudetia simplex ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1028 Score = 391 bits (197), Expect = e-105 Identities = 289/322 (89%) Strand = Plus / Plus Query: 59 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 118 ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 384 aagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcggaaagaaat 443 Query: 119 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 178 |||||||||||||| |||| ||||||| ||||||||||| || ||||||| ||||||||| Sbjct: 444 tttttggaagctccattgcaggattcaaacctaaccattaaaagagaagctgtgggaacg 503 Query: 179 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 238 ||| ||||||||| | ||||||||||| || ||||||||||||| ||||||||||||||| Sbjct: 504 acaaaacctatgactgcataggatttttttaaaaagaatcctaatacttcattgggtggg 563 Query: 239 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 298 ||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 564 atggcggaacaaaccaaaaaacttgctttatttggtaaggttataaattaacaaataaga 623 Query: 299 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 358 |||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 624 caggaaagagtaaatattcgcccgcgaaatctttattggattagaatactttatcacgat 683 Query: 359 tcaataagagtaaaaataagga 380 ||||||||| |||||||||||| Sbjct: 684 tcaataagaataaaaataagga 705 Score = 54.0 bits (27), Expect = 5e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 |||||||||||||||||| |||| ||| |||||||||| Sbjct: 718 cctaactttttctattatatattgatgtgtatctatcc 755
>ref|XM_481019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 99 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 158 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 159 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 218 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 219 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 278 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 279 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 338 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 339 ttagaatactttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 310 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 369 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 370 tgactatatatt 381
>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24 mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 99 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 158 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 159 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 218 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 219 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 278 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 279 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 338 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 339 ttagaatactttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 310 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 369 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 370 tgactatatatt 381
>gb|AY847079.1| Merxmuellera rangei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 385 bits (194), Expect = e-103 Identities = 293/327 (89%), Gaps = 1/327 (0%) Strand = Plus / Plus Query: 52 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 111 |||||| || |||||||||||||| ||||||| ||||||||||||||||||| ||||||| Sbjct: 411 aaatttaaaccaataataaagagcagcccggggtaataaaactgagaaaattgactcgga 470 Query: 112 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 171 |||| |||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 471 aagatattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 530 Query: 172 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 231 |||||||||| ||||||||| | ||||||||| |||||||||||||||||| |||||||| Sbjct: 531 gggaacgacaaaacctatgactacataggattgtattgaaaagaatcctaatacttcatt 590 Query: 232 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaaca 291 |||||||||||||||||||||| || |||||||||||| || ||||||| || Sbjct: 591 gggtgggatggcggaacaaaccaaaaaaattactttatttggtaagattctaaattacca 650 Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttta 351 ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 651 aataagacaggaaagagtaaatattcgcccgcg-aatctttattgaattagaatacttta 709 Query: 352 ccgcgattcaataagagtaaaaataag 378 || ||||||||||||||||||||||| Sbjct: 710 ccatgattcaataagagtaaaaataag 736 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 449 atatattctagatcttcttttttgactatatatt 482 |||||||||||||||||||| || |||||||||| Sbjct: 788 atatattctagatcttctttctttactatatatt 821
>ref|XM_479424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 99 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 158 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 159 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 218 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 219 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 278 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 279 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 338 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 339 ttagaatactttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 309 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 368 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 369 tgactatatatt 380
>ref|XM_479423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 99 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 158 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 159 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 218 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 219 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 278 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 279 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 338 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 339 ttagaatactttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 309 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 368 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 369 tgactatatatt 380
>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full insert sequence Length = 2166 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 99 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 158 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 159 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 218 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 219 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 278 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 279 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 338 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 339 ttagaatactttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 319 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 378 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 379 tgactatatatt 390
>gb|AY847087.1| Danthoniopsis petiolata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1147 Score = 383 bits (193), Expect = e-103 Identities = 289/322 (89%), Gaps = 1/322 (0%) Strand = Plus / Plus Query: 59 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 118 ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 412 aagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcggaaagaaat 471 Query: 119 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 178 |||||||||||||| |||| ||||||| ||||||||||| || ||||||| ||||||||| Sbjct: 472 tttttggaagctccattgcaggattcaaacctaaccattaaaagagaagctgtgggaacg 531 Query: 179 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 238 ||| ||||||||| | |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 532 acaaaacctatgactgcataggattttagtaaaaagaatcctaatacttcattgggtggg 591 Query: 239 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 298 ||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 592 atggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaaataaga 651 Query: 299 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 358 |||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 652 caggaaagagtaaatattcgcccgcgaaatctttattggattagaatacttta-cacgat 710 Query: 359 tcaataagagtaaaaataagga 380 ||||||||| |||||||||||| Sbjct: 711 tcaataagaataaaaataagga 732 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 449 atatattctagatcttcttttttgactatatatt 482 |||||||||||||||||||| ||||||||||||| Sbjct: 777 atatattctagatcttctttcttgactatatatt 810 Score = 40.1 bits (20), Expect = 7.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||| ||||||||||| ||| ||| ||||||||||| Sbjct: 837 cctaaccttttctattatatatggatgtgtatctatccg 875
>gb|AY847090.1| Isachne arundinacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1101 Score = 381 bits (192), Expect = e-102 Identities = 288/321 (89%), Gaps = 1/321 (0%) Strand = Plus / Plus Query: 59 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 118 |||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 395 aagcaataataaggagtagcccgtgttaataaaactgagaaaattgactcggaaagaaat 454 Query: 119 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 178 |||||||||||||| |||| ||||||| |||||| |||| |||||||||| ||||||||| Sbjct: 455 tttttggaagctccattgcaggattcaaacctaaacattaaaggagaagctgtgggaacg 514 Query: 179 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 238 ||| ||||||||| |||||||||||||||||||||||||||| |||||||| | |||| Sbjct: 515 acaaaacctatgacagcataggattttattgaaaagaatcctaatacttcattagatggg 574 Query: 239 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 298 ||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 575 atggcggaacaaaccaaaaaaattgctttatttggtaag-ttataaattaacaaataaga 633 Query: 299 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 358 |||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||| Sbjct: 634 caggaaagagtaaaaattcgcccgcgaaatctttattggattagaatactttaccacgat 693 Query: 359 tcaataagagtaaaaataagg 379 ||||||||||||||||||||| Sbjct: 694 tcaataagagtaaaaataagg 714 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 441 acatctggatatattctagatcttcttttttgactatatatt 482 |||| |||||||||| |||||||||||| | |||||||||| Sbjct: 754 acatttggatatattatagatcttctttctaaactatatatt 795
>gb|AY847114.1| Spartochloa scirpoidea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1176 Score = 377 bits (190), Expect = e-101 Identities = 309/350 (88%), Gaps = 2/350 (0%) Strand = Plus / Plus Query: 31 gtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataa 90 ||||||| ||| || || || |||||| ||||||||| ||||||| ||| |||||||||| Sbjct: 407 gtaacttcaaacaataaataaaaatttaaagcaataaaaaagagcagccggggttaataa 466 Query: 91 aactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacct 150 ||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||| |||| Sbjct: 467 aactgagaaaattgactcggaaatccattttttagaagctccattgcaggattcaaacct 526 Query: 151 aaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattga 210 ||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 527 aaccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggattttcttga 586 Query: 211 aaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatt 270 |||||||||||| |||||||||||||||||||||||||||||| ||| ||||| Sbjct: 587 aaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgctttatt 646 Query: 271 tggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattc 330 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 647 tggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaaccc 706 Query: 331 ttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 |||||| ||||||||||||| | ||||||||||||| |||||||||||| Sbjct: 707 ttattggattagaatacttt--cacgattcaataagaataaaaataagga 754 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||||||||||||||| |||| ||| ||||||||||| Sbjct: 866 cctaactttttctattatatattgatgtgtatctatccg 904 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactat 477 ||||||||||||||||||||||| |||||||| Sbjct: 796 tggatatattctagatcttctttcttgactat 827
>gb|AY847112.1| Cyperochloa hirsuta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 931 Score = 377 bits (190), Expect = e-101 Identities = 313/355 (88%), Gaps = 1/355 (0%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||| ||| || || || |||||| |||||| || ||||||| ||| ||||| Sbjct: 156 aaatcgtaacttcaaacaataaataaaaatttaaagcaacaaaaaagagcagccggggtt 215 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 216 aataaaactgagaaaattgactcggaaataaattttttggaagctccattgcaggattca 275 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 276 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttt 335 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 |||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 336 cttgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 395 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 396 ttatttggtaaggttataaattaacaaataaaacaggaaagagtaaatattcgcccgcga 455 Query: 326 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 ||| |||||| |||| ||||||||| | ||||||||||||| |||||||||||| Sbjct: 456 aatctttattggattaaaatacttta-cacgattcaataagaataaaaataagga 509 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||||||||||||||| |||| ||| ||||||||||| Sbjct: 621 cctaactttttctattatatattgatgtgtatctatccg 659 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatatt 482 ||||||||||||| ||||||||| |||||||| |||| Sbjct: 552 tggatatattctaaatcttctttcttgactatctatt 588
>gb|AY912197.1| Neurolepis nana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1230 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 436 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 495 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| || ||||||||||||||||| |||| Sbjct: 496 tgactcggaaagaaattttttggaagctccattgtggaattcagacctaaccattaaagg 555 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 556 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 615 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 616 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 675 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 676 aatataaattaacaaataagacagaaaagagtaaatattcgcccgcgaaat 726 Score = 117 bits (59), Expect = 4e-23 Identities = 135/159 (84%), Gaps = 11/159 (6%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 412 ||||||||||||||||||||||||| ||||||| |||| || |||||||| ||||| Sbjct: 731 gattcaataagagtaaaaataaggagatttttttttagaaagattacattat---ctata 787 Query: 413 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 472 |||||| ||| ||||||||| ||||| ||||| ||||||||||||||||||||| ||| Sbjct: 788 aatatataatacagataaatagacacacgcatctagatatattctagatcttctttcttg 847 Query: 473 actatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| |||||||||||| ||||| Sbjct: 848 acta-----tatatttttctattttaacaaatttaatat 881 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 896 cctaactttttctattatctattaatgtgcatctatccg 934
>gb|AY912194.1| Chusquea bambusoides ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1174 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 397 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 456 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 457 tgactcggaaagaaattttttgtaagctccattgtgggattcagacctaaccattaaagg 516 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 517 agaagtagtgggaacgacagaacctatgactgcataggatcttattgaaaagaatcctaa 576 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 577 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 636 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 aatataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 687 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%), Gaps = 5/101 (4%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 744 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 803 Query: 471 tgactatatattatatttttctgttttaacaaattcaatat 511 |||||| ||||||||||| |||||||||||||||||| Sbjct: 804 tgacta-----tatatttttctattttaacaaattcaatat 839 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 856 cctaactttttctattatctattaatgtgcatctatccg 894 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt 388 |||||||||||||||||||||||||||| |||| Sbjct: 692 gattcaataagagtaaaaataaggatatatttt 724
>gb|U62786.1|COU62786 Chusquea oxylepis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 406 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 465 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 466 tgactcggaaagaaattttttgtaagctccattgtgggattcagacctaaccattaaagg 525 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 526 agaagtagtgggaacgacagaacctatgactgcataggatcttattgaaaagaatcctaa 585 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 586 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 645 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 aatataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 696 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%), Gaps = 5/101 (4%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 753 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 812 Query: 471 tgactatatattatatttttctgttttaacaaattcaatat 511 |||||| ||||||||||| |||||||||||||||||| Sbjct: 813 tgacta-----tatatttttctattttaacaaattcaatat 848 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt 388 ||||||||||||||||||||||||||||||||| Sbjct: 701 gattcaataagagtaaaaataaggatatttttt 733 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 865 cctaactttttctattatctattaatgtgcatctatccg 903
>gb|U62780.1|CAU62780 Chusquea aff. fendleri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 125 bits (63), Expect = 2e-25 Identities = 136/159 (85%), Gaps = 11/159 (6%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 412 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 413 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 472 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 473 actatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| |||||||||||| ||||| Sbjct: 816 acta-----tatatttttctattttaacaaattaaatat 849 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctat 893
>gb|AY847085.1| Arundinella hirta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 375 bits (189), Expect = e-100 Identities = 308/349 (88%), Gaps = 7/349 (2%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||| | ||||||||| ||||||| ||| ||||| Sbjct: 399 aaatcgtaacttgaaacaacaaataaaaatataaagcaataaaaaagagcagcc-gggtt 457 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 458 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 517 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 518 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactacataggatttt 577 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 |||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 578 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgct 637 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 ttatttgataaagttctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 697 Query: 326 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 374 ||| || |||||||||||||||| ||||||||||||| |||||| Sbjct: 698 aatcct------attagaatactttaccacgattcaataagaataaaaa 740 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 449 atatattctagatcttcttttttgactatatatt 482 |||||||||||||||||||| ||||||||||||| Sbjct: 797 atatattctagatcttctttcttgactatatatt 830 Score = 44.1 bits (22), Expect = 0.49 Identities = 30/33 (90%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatc 560 |||||||||||||||||| |||| ||| ||||| Sbjct: 871 cctaactttttctattatatattgatgtgtatc 903
>gb|AY847076.1| Aristida purpurea var. curvifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1112 Score = 375 bits (189), Expect = e-100 Identities = 309/350 (88%), Gaps = 1/350 (0%) Strand = Plus / Plus Query: 25 aaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggt 84 ||||| ||||||||||| || || || |||||| || ||||||||| |||| || ||||| Sbjct: 377 aaaatcgtaacttgaaacaataaataaaaatttaaaacaataataaggagcagctcgggt 436 Query: 85 taataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattc 144 ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| Sbjct: 437 taataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattc 496 Query: 145 agacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattt 204 | |||||| |||| || ||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 497 aaacctaagcattaaaagagaagctgtgggaacgacaaaacctatgactccataggattt 556 Query: 205 tattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgt 264 | |||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 557 ttttgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgc 616 Query: 265 cttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcg 324 |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 617 tttatttggtaaggttataaattaacaaataagacagtaaagagtaaatatttgcccgcg 676 Query: 325 aaattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 374 |||| |||||| ||| |||||||||| | ||||| |||||||||||||| Sbjct: 677 aaatctttattggatttgaatacttta-cacgatttaataagagtaaaaa 725 Score = 46.1 bits (23), Expect = 0.12 Identities = 34/38 (89%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 |||||||||||||||||| |||| ||| |||| ||||| Sbjct: 802 cctaactttttctattatatattgatgtgtatttatcc 839
>gb|AY847093.1| Thysanolaena latifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1182 Score = 373 bits (188), Expect = e-100 Identities = 319/364 (87%), Gaps = 2/364 (0%) Strand = Plus / Plus Query: 16 agagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagc 75 ||||||| ||||| ||||||| ||| || || || ||||| ||||||||| ||||||| Sbjct: 394 agagaattcaaaatcgtaacttcaaacaataaataaaaattgaaagcaataaaaaagagc 453 Query: 76 cgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgtt 135 ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || Sbjct: 454 agcccgggttaataaaactgagaaaattgactcggaaataaattttttggaagctccatt 513 Query: 136 gcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattcc 195 || ||||||| ||||||||||| |||||||||| |||||||||||| ||||||||| | | Sbjct: 514 gcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgc 573 Query: 196 ataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnn 255 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 574 ataggattttattgaaaagaatcctaatacttcattggttgggatggcggaacaaaccaa 633 Query: 256 nnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatat 315 ||| |||||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 634 aaaaattgctttatttggtaaggttataaattaacaaatatgacaggaaagagtaaattt 693 Query: 316 tcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaat 375 || |||||||||| |||||| |||| |||||||| | ||||||||||||| ||||||| Sbjct: 694 tcccccgcgaaatctttattggattataatacttt--cacgattcaataagaataaaaat 751 Query: 376 aagg 379 |||| Sbjct: 752 aagg 755 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatatt 482 ||||||||||||||||||||||| |||||||| |||| Sbjct: 804 tggatatattctagatcttctttcttgactatctatt 840 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||||||||||||||| |||| ||| ||||||||||| Sbjct: 872 cctaactttttctattatatattgatgtgtatctatccg 910
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 369 bits (186), Expect = 7e-99 Identities = 302/339 (89%), Gaps = 3/339 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| || | ||||||||| ||| Sbjct: 144957 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcctgagttaataaa-ctg 145015 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 145016 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 145074 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || |||||||||||||||||| |||||||||||||| | |||||||||| ||||||| | Sbjct: 145075 ttaaaggagaagcagtgggaatgacagaacctatgactggataggattttcttgaaaaaa 145134 Query: 216 atcctaacacttcattgggtgggatggcggaacaaacc-nnnnnnnttgtcttatttggt 274 |||| || |||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 145135 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaaattgtcttatttgat 145194 Query: 275 aagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttat 334 ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 145195 aaggttatgaattaacaaataagacatgaaagagtaaatattcgcccgcgaaatttttat 145254 Query: 335 tgaattagaatactttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||||||||||||||| Sbjct: 145255 tgaattagaatactttaccgcgattcaataagagtaaaa 145293 Score = 81.8 bits (41), Expect = 2e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 469 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 145326 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 145385 Query: 470 ttgactatatatt 482 ||||||||||||| Sbjct: 145386 ttgactatatatt 145398
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 369 bits (186), Expect = 7e-99 Identities = 302/339 (89%), Gaps = 3/339 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| ||||||| || | ||||||||| ||| Sbjct: 4144 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcctgagttaataaa-ctg 4202 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 4203 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 4261 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || |||||||||||||||||| |||||||||||||| | |||||||||| ||||||| | Sbjct: 4262 ttaaaggagaagcagtgggaatgacagaacctatgactggataggattttcttgaaaaaa 4321 Query: 216 atcctaacacttcattgggtgggatggcggaacaaacc-nnnnnnnttgtcttatttggt 274 |||| || |||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 4322 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaaattgtcttatttgat 4381 Query: 275 aagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttat 334 ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 4382 aaggttatgaattaacaaataagacatgaaagagtaaatattcgcccgcgaaatttttat 4441 Query: 335 tgaattagaatactttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||||||||||||||| Sbjct: 4442 tgaattagaatactttaccgcgattcaataagagtaaaa 4480 Score = 81.8 bits (41), Expect = 2e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 469 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 4513 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 4572 Query: 470 ttgactatatatt 482 ||||||||||||| Sbjct: 4573 ttgactatatatt 4585
>gb|AY912195.1| Chusquea culeou ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1181 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 402 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 461 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 462 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 521 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 522 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 581 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 582 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 641 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 642 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 692 Score = 127 bits (64), Expect = 4e-26 Identities = 137/160 (85%), Gaps = 11/160 (6%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||||||||||| |||| || |||||||| |||| Sbjct: 697 gattcaataagagtaaaaataaggatatttttttttaagaaagattacattat---ctat 753 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 754 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 813 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 |||||||||| ||||||| |||||||||||| ||||| Sbjct: 814 gactatatat----tttttctattttaacaaattaaatat 849 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctatcc 895
>gb|AF133472.1|AF133472 Chusquea ramosissima ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1193 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 428 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 487 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 488 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 547 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 548 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 607 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 608 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 667 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 668 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 718 Score = 107 bits (54), Expect = 4e-20 Identities = 134/160 (83%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 |||||||||||||||||| |||||| ||||||| |||| || |||||||| |||| Sbjct: 723 gattcaataagagtaaaantaaggagatttttttttaagaaagattacattat---ctat 779 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 780 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 839 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 840 gacta-----tatatttttctattttaacaaattaaatat 874 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 883 cctaactttttctattatctattaatgtgcatctat 918
>gb|U62793.1|NAU62793 Neurolepis aperta ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1052 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 405 aagaaatacaaattttaagcaataataaagagcggcccgggttaataaaactgagaaaat 464 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | ||| |||||||| ||||||||||||||| ||| || ||||||||||||||||| || | Sbjct: 465 tgacttggaaagaatttttttggaagctccattgtggaattcagacctaaccattaaacg 524 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 525 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 584 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 585 tacttcattgggtgggatggcggaacaaaccaaaagaattgccttatttggtaaggttat 644 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 aatataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 695 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%), Gaps = 5/109 (4%) Strand = Plus / Plus Query: 403 attatctataaatatagaatttagataaatatccacacacatctggatatattctagatc 462 |||||||||||||||||||| |||| ||||| ||||||||||| ||||||||| ||||| Sbjct: 767 attatctataaatatagaatatagaaaaatagacacacacatctagatatattccagatc 826 Query: 463 ttcttttttgactatatattatatttttctgttttaacaaattcaatat 511 |||||| ||||||| ||||||||||| ||||||||||||| |||| Sbjct: 827 ttctttcttgacta-----tatatttttctattttaacaaattcgatat 870 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 889 cctaactttttctattatctattaatgtgcatctatccg 927 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataagga 380 ||||||||||||||||||||||||| Sbjct: 713 gattcaataagagtaaaaataagga 737
>gb|U62789.1|CTU62789 Chusquea talamancensis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 125 bits (63), Expect = 2e-25 Identities = 136/159 (85%), Gaps = 11/159 (6%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 412 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 413 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 472 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 473 actatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| |||||||||||| ||||| Sbjct: 816 acta-----tatatttttctattttaacaaattaaatat 849 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctat 893
>gb|U62788.1|CSU62788 Chusquea spencei ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 125 bits (63), Expect = 2e-25 Identities = 136/159 (85%), Gaps = 11/159 (6%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 412 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 413 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 472 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 473 actatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| |||||||||||| ||||| Sbjct: 816 acta-----tatatttttctattttaacaaatttaatat 849 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctat 893
>gb|U62787.1|CSU62787 Chusquea sp. A ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 407 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 466 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 467 tgactcggaaagaaattttttgaaagctccattgtgggattcagacctaaccattaaagg 526 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 527 agaagtagtgggaacgacagaacctatgactgcataggatcttattgaaaagaatcctaa 586 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 587 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 646 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 647 aatataaattaacaaataagataggaaagagtaaatattcgcccgcgaaat 697 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%), Gaps = 5/101 (4%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 752 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 811 Query: 471 tgactatatattatatttttctgttttaacaaattcaatat 511 |||||| ||||||||||| |||||||||||||||||| Sbjct: 812 tgacta-----tatatttttctattttaacaaattcaatat 847 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt 388 ||||||||||||||||||||||||||||||||| Sbjct: 702 gattcaataagagtaaaaataaggatatttttt 734 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 864 cctaactttttctattatctattaatgtgcatctatccg 902
>gb|U62785.1|COU62785 Chusquea oligophylla ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 406 aagaaatagaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 465 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 466 tgactcggaaagaaattttttgtaagctccattgtgggattcagacctaaccattaaagg 525 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 526 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 585 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 586 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 645 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 646 aatataaattaacaaataagacaggaaagagtaaatatccgcccgcgaaat 696 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%), Gaps = 5/101 (4%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 752 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 811 Query: 471 tgactatatattatatttttctgttttaacaaattcaatat 511 |||||| ||||||||||| |||||||||||||||||| Sbjct: 812 tgacta-----tatatttttctattttaacaaattcaatat 847 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt 388 ||||||||||||||||||||||||||||||||| Sbjct: 701 gattcaataagagtaaaaataaggatatttttt 733 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 865 cctaactttttctattatctattaatgtgcatctatccg 903
>gb|U62784.1|CEU62784 Chusquea exasperata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 tgactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 113 bits (57), Expect = 6e-22 Identities = 135/160 (84%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 816 gacta-----tatatttttctattttaacaaattaaatat 850 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 859 cctaactttttctattatctattaatgtgcatctat 894
>gb|U54752.1|CTU54752 Chusquea tessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 125 bits (63), Expect = 2e-25 Identities = 136/159 (85%), Gaps = 11/159 (6%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 412 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 413 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 472 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 473 actatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| |||||||||||| ||||| Sbjct: 816 acta-----tatatttttctattttaacaaattaaatat 849 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctat 893
>gb|U54758.1|CSU54758 Chusquea sp. 'LC et al. 1309' ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1035 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 405 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 464 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 465 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 524 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 525 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 584 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 585 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 644 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 645 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 695 Score = 105 bits (53), Expect = 2e-19 Identities = 135/162 (83%), Gaps = 14/162 (8%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt------agaaggactacattattatct 409 ||||||||||||||||||||||||| ||||||| |||| || |||||||| || Sbjct: 700 gattcaataagagtaaaaataaggagatttttttttttaagaaagattacattat---ct 756 Query: 410 ataaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt 469 ||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 757 ataaatatataatacggataaatagacacacacatctagatatattctagatcttctttc 816 Query: 470 ttgactatatattatatttttctgttttaacaaattcaatat 511 ||||||| ||||||||||| |||||||||||| ||||| Sbjct: 817 ttgacta-----tatatttttctattttaacaaattaaatat 853 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 862 cctaactttttctattatctattaatgtgcatctatcc 899
>gb|U54754.1|CSU54754 Chusquea serpens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 113 bits (57), Expect = 6e-22 Identities = 135/160 (84%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataataaggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 816 gacta-----tatatttttctattttaacaaattaaatat 850 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctat 893
>gb|U54753.1|CSU54753 Chusquea subtessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 125 bits (63), Expect = 2e-25 Identities = 136/159 (85%), Gaps = 11/159 (6%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 412 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 413 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 472 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 473 actatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| |||||||||||| ||||| Sbjct: 816 acta-----tatatttttctattttaacaaattaaatat 849 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctat 893
>gb|U54751.1|CRU54751 Chusquea ramosissima ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 113 bits (57), Expect = 6e-22 Identities = 135/160 (84%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 816 gacta-----tatatttttctattttaacaaattaaatat 850 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 859 cctaactttttctattatctattaatgtgcatctat 894
>gb|U54760.1|CLU54760 Chusquea liebmannii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 tgactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 113 bits (57), Expect = 6e-22 Identities = 135/160 (84%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 816 gacta-----tatatttttctattttaacaaattaaatat 850 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 859 cctaactttttctattatctattaatgtgcatctatcc 896
>gb|U54759.1|CCU54759 Chusquea coronalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 403 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 462 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 463 tgactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 522 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 523 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 582 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 583 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 642 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 643 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 693 Score = 113 bits (57), Expect = 6e-22 Identities = 135/160 (84%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 698 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 754 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 755 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 814 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 815 gacta-----tatatttttctattttaacaaattaaatat 849 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctatcc 895
>gb|U54757.1|CBU54757 Chusquea bilimekii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1033 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 405 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 464 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 465 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 524 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 525 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 584 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 585 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 644 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 645 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 695 Score = 113 bits (57), Expect = 6e-22 Identities = 135/160 (84%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 700 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 756 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 757 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 816 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 817 gacta-----tatatttttctattttaacaaattaaatat 851 Score = 61.9 bits (31), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||||||||||||| | |||||||| Sbjct: 860 cctaactttttctattatctattaatgtgcatctatcc 897
>gb|AY847100.1| Chasmanthium sessiliflorum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 367 bits (185), Expect = 3e-98 Identities = 283/318 (88%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||| ||||| Sbjct: 372 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagccagggtt 431 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 432 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 491 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||| | ||||||||| | ||||||||||| Sbjct: 492 aacctaaccattaaaggagaagctgtgggaacgagaaaacctatgactgcataggatttt 551 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| ||||||||||||||||||||| |||||||| || Sbjct: 552 attgaaaagaatcctaatacttcattgggtgggatggcgaaacaaaccaaaaaaaatgct 611 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 671 Query: 326 aattcttattgaattaga 343 ||| |||||| |||||| Sbjct: 672 aatctttattggattaga 689 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactat 477 ||||||||||||||||||||||| |||||||| Sbjct: 764 tggatatattctagatcttctttcttgactat 795 Score = 48.1 bits (24), Expect = 0.032 Identities = 35/39 (89%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||||||||||||||| |||| || ||||||||||| Sbjct: 833 cctaactttttctattatatattgatatgtatctatccg 871
>gb|AY847099.1| Chasmanthium laxum rpl16 gene, intron; chloroplast Length = 1165 Score = 367 bits (185), Expect = 3e-98 Identities = 283/318 (88%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||| ||||| Sbjct: 393 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagccagggtt 452 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 453 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 512 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||| | ||||||||| | ||||||||||| Sbjct: 513 aacctaaccattaaaggagaagctgtgggaacgagaaaacctatgactgcataggatttt 572 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| ||||||||||||||||||||| |||||||| || Sbjct: 573 attgaaaagaatcctaatacttcattgggtgggatggcgaaacaaaccaaaaaaaatgct 632 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 692 Query: 326 aattcttattgaattaga 343 ||| |||||| |||||| Sbjct: 693 aatctttattggattaga 710 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactat 477 ||||||||||||||||||||||| |||||||| Sbjct: 786 tggatatattctagatcttctttcttgactat 817 Score = 48.1 bits (24), Expect = 0.032 Identities = 35/39 (89%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||||||||||||||| |||| || ||||||||||| Sbjct: 856 cctaactttttctattatatattgatatgtatctatccg 894
>gb|AY847096.1| Bromuniola gossweileri rpl16 gene, intron; chloroplast Length = 557 Score = 367 bits (185), Expect = 3e-98 Identities = 283/318 (88%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||| ||||| Sbjct: 204 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagccagggtt 263 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 264 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 323 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||| | ||||||||| | ||||||||||| Sbjct: 324 aacctaaccattaaaggagaagctgtgggaacgagaaaacctatgactgcataggatttt 383 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| ||||||||||||||||||||| |||||||| || Sbjct: 384 attgaaaagaatcctaatacttcattgggtgggatggcgaaacaaaccaaaaaaaatgct 443 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 503 Query: 326 aattcttattgaattaga 343 ||| |||||| |||||| Sbjct: 504 aatctttattggattaga 521
>gb|AF133482.1|AF133482 Chasmanthium laxum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1195 Score = 367 bits (185), Expect = 3e-98 Identities = 307/349 (87%), Gaps = 7/349 (2%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||| ||||| Sbjct: 419 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagcctgggtt 478 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 479 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 538 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| ||||||||| |||| |||||| | ||||||||||| Sbjct: 539 aacctaaccattaaaggagaagctgtgggaacg--agaatctatgactgcataggatttt 596 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| ||||||||||||||||||||| |||||||| |||| Sbjct: 597 attgaaaagaatcctaatacttcattgggtgggatggcgaaacaaaccaaaaaaattgtt 656 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 716 Query: 326 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 374 ||| |||||| |||||| ||||||||||||||||| |||||| Sbjct: 717 aatctttattggcttagaa-----caccgcgattcaataagaataaaaa 760 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactat 477 ||||||||||||||||||||||| |||||||| Sbjct: 816 tggatatattctagatcttctttcttgactat 847
>gb|U62781.1|CSU62781 Chusquea scandens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 367 bits (185), Expect = 3e-98 Identities = 256/282 (90%), Gaps = 5/282 (1%) Strand = Plus / Plus Query: 52 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 111 |||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 413 aaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaatttactcgga 472 Query: 112 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 171 ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| ||| Sbjct: 473 aagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtagt 532 Query: 172 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 231 |||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||| Sbjct: 533 gggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaatacttcatt 592 Query: 232 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaat 286 |||||||||||||||||||||| ||| ||||||||||||| | ||||||| Sbjct: 593 gggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaat 652 Query: 287 taacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 653 taacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 125 bits (63), Expect = 2e-25 Identities = 136/159 (85%), Gaps = 11/159 (6%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 412 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 413 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 472 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 473 actatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| |||||||||||| ||||| Sbjct: 816 acta-----tatatttttctattttaacaaattaaatat 849 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctat 893
>gb|AF133483.1|AF133483 Zeugites pittieri ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1107 Score = 363 bits (183), Expect = 4e-97 Identities = 263/292 (90%) Strand = Plus / Plus Query: 52 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 111 |||||| ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 451 aaatttcaagcaataaaaaagagcagcccgggttaataaaactgagaaaattgactcgga 510 Query: 112 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 171 ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 511 aagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 570 Query: 172 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 231 |||||||| | ||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 571 gggaacgaaaaaacctatgactggataggattttattgaaaagaatcctaatacttcatt 630 Query: 232 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaaca 291 |||||||||||||||||||||| ||| |||||||||||| ||||||||||||| Sbjct: 631 gggtgggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaaca 690 Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 343 ||||||||||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 691 aataagacaggaaagagtaaacattcgcccgcgaaatctttattggattaga 742
>gb|AY847089.1| Tristachya biseriata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1150 Score = 361 bits (182), Expect = 2e-96 Identities = 285/322 (88%) Strand = Plus / Plus Query: 59 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 118 ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 415 aagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcggaaagaaat 474 Query: 119 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 178 |||||||||||||| |||| ||||||| ||||||||||| || ||||||| ||||||||| Sbjct: 475 tttttggaagctccattgcaggattcaaacctaaccattaaaagagaagctgtgggaacg 534 Query: 179 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 238 ||| ||||||||| | |||||||||||||| ||||||||||||| ||||||||||| ||| Sbjct: 535 acaaaacctatgactgcataggattttattaaaaagaatcctaatacttcattgggcggg 594 Query: 239 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 298 ||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 595 atggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaaataaga 654 Query: 299 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 358 | | |||||||||||||||||| ||||||| |||||| |||||||||||||| | |||| Sbjct: 655 cngaaaagagtaaatattcgcctgcgaaatctttattggattagaatactttatcacgat 714 Query: 359 tcaataagagtaaaaataagga 380 ||||||| | |||||||||||| Sbjct: 715 tcaataaaaataaaaataagga 736 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatatt 482 ||||||||||||||||||||||| ||||||||||||| Sbjct: 778 tggatatattctagatcttctttcttgactatatatt 814 Score = 48.1 bits (24), Expect = 0.032 Identities = 35/39 (89%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||||||||||| ||| |||| ||| ||||||||||| Sbjct: 841 cctaactttttctaatatatattgatgtgtatctatccg 879
>gb|U62790.1|CVU62790 Chusquea vulcanalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 361 bits (182), Expect = 2e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaaccaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 125 bits (63), Expect = 2e-25 Identities = 136/159 (85%), Gaps = 11/159 (6%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 412 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 413 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 472 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 473 actatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| |||||||||||| ||||| Sbjct: 816 acta-----tatatttttctattttaacaaattaaatat 849 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctat 893
>gb|U62782.1|CTU62782 Chusquea tomentosa ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1030 Score = 361 bits (182), Expect = 2e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 403 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 462 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 463 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 522 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | |||||| |||| |||||||||||||||| Sbjct: 523 agaagtagtgggaacgacagaacctatgactgcatagggtttttttgaaaagaatcctaa 582 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 583 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 642 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 643 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 693 Score = 125 bits (63), Expect = 2e-25 Identities = 136/159 (85%), Gaps = 11/159 (6%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 412 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 698 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 754 Query: 413 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 472 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 755 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 814 Query: 473 actatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| |||||||||||| ||||| Sbjct: 815 acta-----tatatttttctattttaacaaattaaatat 848 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 857 cctaactttttctattatctattaatgtgcatctat 892
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 359 bits (181), Expect = 6e-96 Identities = 277/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Minus Query: 66 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 125 |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 80552 aataaagagcagcc-gggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 80496 Query: 126 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 185 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 80495 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 80436 Query: 186 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 245 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80435 ctatgactacataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 80376 Query: 246 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 305 |||||||| ||| ||||||| |||| || |||||||||||||||||||||||| Sbjct: 80375 aacaaaccaaaaaaattgctttatttgataaggttctaaattaacaaataagacaggaaa 80316 Query: 306 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 365 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 80315 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 80256 Query: 366 gagtaaaaa 374 || |||||| Sbjct: 80255 gaataaaaa 80247 Score = 75.8 bits (38), Expect = 1e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 446 tggatatattctagatcttcttttttgactatatattatatttttctgttttaa 499 ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||| Sbjct: 80195 tggatatattctagatcttctttcttgactatatatt-tatttttcttttttaa 80143 Score = 52.0 bits (26), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Minus Query: 528 cctaactttttctattatctattaatgngtatctatc 564 |||||||||||||||||| |||| ||| ||||||||| Sbjct: 80116 cctaactttttctattatatattgatgtgtatctatc 80080
>gb|AF133488.1|AF133488 Pharus lappulaceus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1182 Score = 359 bits (181), Expect = 6e-96 Identities = 281/314 (89%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 63 aataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaatttt- 121 ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 419 aataataaagagcagcctgggttaataaaactgagaaaattgactcggaaagaaattttg 478 Query: 122 ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgaca 181 ||||||||||| ||||||| |||||||||||||||| | ||||||||||||||||||||| Sbjct: 479 ttggaagctccattgcggggttcagacctaaccattaatggagaagcagtgggaacgaca 538 Query: 182 gaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggat 240 |||||||||| | |||| |||||| || |||| ||||||||| ||||||||||||||||| Sbjct: 539 gaacctatgactgcataagattttcttaaaaacgaatcctaatacttcattgggtgggat 598 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||| |||||||||||| ||||||||| | ||||||||| Sbjct: 599 ggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattgatgaataagaca 658 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 360 |||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||| Sbjct: 659 ggaaagagtaaatattcgcccgcgaaatctttattggattagaatactttactgtgattc 718 Query: 361 aataagagtaaaaa 374 |||||||||||||| Sbjct: 719 aataagagtaaaaa 732 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 425 agataaatatccacacacatctggatatattctagatcttcttttttgactatatat 481 ||||||||| ||||||| ||| ||||||||||| ||||||||| |||| ||||||| Sbjct: 779 agataaatagacacacacgtctagatatattctatatcttctttcttgattatatat 835 Score = 42.1 bits (21), Expect = 1.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 535 ttttctattatctattaatgngtatctatccg 566 |||| ||||||||||||||| |||||||||| Sbjct: 874 ttttgtattatctattaatgtatatctatccg 905
>gb|AY847075.1| Karroochloa purpurea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 357 bits (180), Expect = 3e-95 Identities = 305/349 (87%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||||||||||||||| || | | ||||| ||| ||||||||||||| ||||||||| Sbjct: 374 aaattgtaacttgaaacaactaatcaaaattgaaagaaataataaagagcagcccgggtt 433 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||||||||| ||||||||||||| |||||||| |||| ||||||| Sbjct: 434 aataaaactgagaaaattaactcgaaaagaaatttttttgaagctccattgcaggattca 493 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| ||||||||||| ||||||||| | ||||||||||| Sbjct: 494 aacctaaccattaaaggagaagctatgggaacgacaaaacctatgactgcataggatttt 553 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| || |||| |||||||||||||||||||||| ||| Sbjct: 554 attgaaaagaatcctaatacatcatcgggtgggatggcggaacaaaccccaaaacttgct 613 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 ttatttggtaaaattataaattaacaaataagacaggaaagagtaaatattcgcccgcga 673 Query: 326 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 374 ||| |||||| ||| ||||||||||| ||||||||||| |||||| Sbjct: 674 aatatttattggattcgaatactttactataattcaataagactaaaaa 722
>gb|AY912215.1| Temochloa liliana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1149 Score = 357 bits (180), Expect = 3e-95 Identities = 311/358 (86%), Gaps = 8/358 (2%) Strand = Plus / Plus Query: 25 aaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggt 84 ||||| ||||||||||| || || || |||||| || ||||||||| |||| || ||||| Sbjct: 382 aaaatcgtaacttgaaacaataaataaaaatttaaaacaataataaggagcagctcgggt 441 Query: 85 taataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattc 144 ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| Sbjct: 442 taataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattc 501 Query: 145 agacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattt 204 | |||||| |||| || ||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 502 aaacctaagcattaaaagagaagctgtgggaacgacaaaacctatgactccataggattt 561 Query: 205 tattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgt 264 | |||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 562 ttttgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgc 621 Query: 265 cttatttggtaagtttataaattaa--------caaataagacaggaaagagtaaatatt 316 |||||||||||| ||||||||||| |||||||||||| |||||||||||||| Sbjct: 622 tttatttggtaaggttataaattaacaaataagcaaataagacagtaaagagtaaatatt 681 Query: 317 cgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 374 |||||||||||| |||||| ||| |||||||||||| ||||| |||||||||||||| Sbjct: 682 cgcccgcgaaatctttattggatttgaatactttaccacgatttaataagagtaaaaa 739 Score = 40.1 bits (20), Expect = 7.7 Identities = 31/35 (88%) Strand = Plus / Plus Query: 531 aactttttctattatctattaatgngtatctatcc 565 ||||||||||||||| |||| ||| |||| ||||| Sbjct: 828 aactttttctattatatattgatgtgtatttatcc 862
>gb|AY847080.1| Sporobolus indicus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1023 Score = 353 bits (178), Expect = 4e-94 Identities = 333/387 (86%), Gaps = 10/387 (2%) Strand = Plus / Plus Query: 2 ataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaag 61 ||||||||| ||| ||||||| |||| |||| |||||| || || || |||||| ||| Sbjct: 364 ataataaaaataagagagaattttaaatcgtaatttgaaacaataaataaaaatttaaag 423 Query: 62 caataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaatttt 121 |||||||||||||| |||||| |||||||||||||||||||||||||| |||| | Sbjct: 424 caataataaagagcagcccggattaataaaactgagaaaattaactcgaaaag------t 477 Query: 122 ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgaca 181 ||||||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| Sbjct: 478 ttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgaca 537 Query: 182 gaacctatgattccatag----gattttattgaaaagaatcctaacacttcattgggtgg 237 ||||||||| | ||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 538 aaacctatgactgcataggattgattttattgaaaagaatcctaatacttcattgggtgg 597 Query: 238 gatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataag 297 |||||||||||||||| ||| |||||||||||| ||||||||||||||||||| Sbjct: 598 gatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaaataag 657 Query: 298 acaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcga 357 ||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| || Sbjct: 658 acaagaaagagtaaatattcgcccgcgaaatctttattggattagaatactttactatga 717 Query: 358 ttcaataagagtaaaaataaggatatt 384 ||||||||| |||||| ||||||||| Sbjct: 718 ttcaataaggttaaaaaaaaggatatt 744
>gb|AY912196.1| Neurolepis aristata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1206 Score = 353 bits (178), Expect = 4e-94 Identities = 261/291 (89%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 414 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 473 Query: 103 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 162 | |||||||||||||||||||||||||||| ||| || ||||||||||||||||| |||| Sbjct: 474 tgactcggaaagaaattttttggaagctccattgtggaattcagacctaaccattaaagg 533 Query: 163 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 222 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 534 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 593 Query: 223 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 279 | |||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 594 tatttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 653 Query: 280 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 |||||||||||||||||| ||| ||||||||||| |||||||||||||| Sbjct: 654 aatataaattaacaaataagccagaaaagagtaaattttcgcccgcgaaat 704 Score = 107 bits (54), Expect = 4e-20 Identities = 112/130 (86%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 412 ||||||||||||||||||||||||| ||||||| |||| || |||||||| ||||| Sbjct: 709 gattcaataagagtaaaaataaggagatttttttttagaaagattacattat---ctata 765 Query: 413 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 472 |||||| ||| ||||||||| ||| | ||||| ||||||||||||||||||||| ||| Sbjct: 766 aatatataatccagataaatagacactcgcatctagatatattctagatcttctttcttg 825 Query: 473 actatatatt 482 |||||||||| Sbjct: 826 actatatatt 835 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 874 cctaactttttctattatctattaatgtgcatctatccg 912
>gb|AY847086.1| Danthoniopsis dinteri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1152 Score = 351 bits (177), Expect = 2e-93 Identities = 285/322 (88%), Gaps = 1/322 (0%) Strand = Plus / Plus Query: 59 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 118 ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 417 aagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcggaaagaaat 476 Query: 119 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 178 |||||||||||||| |||| ||||||| |||||||| || || ||||||| ||||||||| Sbjct: 477 tttttggaagctccattgcaggattcaaacctaacctttaaaagagaagctgtgggaacg 536 Query: 179 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 238 ||| ||||||||| | ||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 537 acaaaacctatgactgcataggattttttgaaaaagaatcctaatacttcattgggtggg 596 Query: 239 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 298 |||||||| |||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 597 atggcggatcaaaccaaaaaaattgctttatttggtaaggttataaattaacaaataaga 656 Query: 299 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 358 |||||||||||||||||||||||||||||| ||||| |||||||||||||| | |||| Sbjct: 657 caggaaagagtaaatattcgcccgcgaaatctttattagattagaatacttta-cacgat 715 Query: 359 tcaataagagtaaaaataagga 380 ||||||||| |||||||||||| Sbjct: 716 tcaataagaataaaaataagga 737 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||||||||||||||| |||| ||| ||||||||||| Sbjct: 842 cctaactttttctattatatattgatgtgtatctatccg 880 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatatt 482 ||||||||||||||||||| ||| || |||||||||| Sbjct: 779 tggatatattctagatcttttttctttactatatatt 815
>gb|AF133477.1|AF133477 Zea mays ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 351 bits (177), Expect = 2e-93 Identities = 275/309 (88%), Gaps = 2/309 (0%) Strand = Plus / Plus Query: 66 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 125 ||||||||| | ||||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 437 aataaagagtcagccgggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 494 Query: 126 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 185 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 495 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 554 Query: 186 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 245 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 ctatgactacataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 614 Query: 246 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 305 |||||||| ||| ||||||| || | || |||||||||||||||||||||||| Sbjct: 615 aacaaaccaaaaaaattgctttatttgataggattctaaattaacaaataagacaggaaa 674 Query: 306 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 365 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 675 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 734 Query: 366 gagtaaaaa 374 || |||||| Sbjct: 735 gaataaaaa 743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 51/54 (94%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatattatatttttctgttttaa 499 ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||| Sbjct: 796 tggatatattctagatcttctttcttgactatatatt-tatttttcttttttaa 848 Score = 52.0 bits (26), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatc 564 |||||||||||||||||| |||| ||| ||||||||| Sbjct: 875 cctaactttttctattatatattgatgtgtatctatc 911
>gb|U62791.1|CJU62791 Chusquea juergensii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1059 Score = 351 bits (177), Expect = 2e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 408 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 467 Query: 103 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 160 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 468 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 527 Query: 161 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 220 ||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct: 528 ggagaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcct 587 Query: 221 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 279 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 588 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 647 Query: 280 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 648 ataatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 700 Score = 113 bits (57), Expect = 6e-22 Identities = 135/160 (84%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 705 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 761 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 762 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 821 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 822 gacta-----tatatttttctattttaacaaattaaatat 856 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 886 cctaactttttctattatctattaatgtgcatctat 921
>gb|U54756.1|CPU54756 Chusquea pinifolia ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1038 Score = 351 bits (177), Expect = 2e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 408 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 467 Query: 103 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 160 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 468 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 527 Query: 161 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 220 ||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct: 528 ggagaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcct 587 Query: 221 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 279 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 588 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 647 Query: 280 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 648 ataatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 700 Score = 113 bits (57), Expect = 6e-22 Identities = 135/160 (84%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 705 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 761 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 762 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 821 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 822 gacta-----tatatttttctattttaacaaattaaatat 856 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 865 cctaactttttctattatctattaatgtgcatctat 900
>gb|AY847107.1| Zeugites hackelii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1073 Score = 349 bits (176), Expect = 6e-93 Identities = 268/301 (89%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||||||| Sbjct: 398 aaatcgtaacttgaaacaataaataaaaatttcaagcaataaaaaagagcagcccgggtt 457 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 458 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 517 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||| | ||||||||| | |||||||||| Sbjct: 518 aacctaaccattaaaggagaagctgtgggaacgaaaaaacctatgactggataggatttt 577 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 578 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 637 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 638 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcga 697 Query: 326 a 326 | Sbjct: 698 a 698
>gb|AY847083.1| Paspalum conjugatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1157 Score = 349 bits (176), Expect = 6e-93 Identities = 305/352 (86%), Gaps = 10/352 (2%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || ||||| ||||||||| ||||||| ||||||||| Sbjct: 392 aaatcgtaacttgaaacaacaaataaaaattgaaagcaataaaaaagagcagcccgggtt 451 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||| |||||||| |||||||| |||| ||||||| Sbjct: 452 aataaaactgagaaaattgactcggaaagcaatttttttgaagctccattgcaggattca 511 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||| ||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 512 aacctagccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttt 571 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 572 attgaaaagaatcctaacacttcattgggtgggatggcggagcaaaccaaaaaaattgct 631 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 ttatttgataaggttctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 691 Query: 326 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataa 377 ||| |||| |||||||||| ||||||||||||| ||||||||| Sbjct: 692 aatcctta----------atactttaccacgattcaataagaataaaaataa 733 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatatt 482 |||||||| |||||||||||||| ||||||||||||| Sbjct: 776 tggatatactctagatcttctttcttgactatatatt 812 Score = 52.0 bits (26), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Plus Query: 529 ctaactttttctattatctattaatgngtatctatcc 565 ||||||||||||||||| |||| ||| |||||||||| Sbjct: 846 ctaactttttctattatatattgatgtgtatctatcc 882
>gb|AY847078.1| Eragrostis curvula ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1163 Score = 349 bits (176), Expect = 6e-93 Identities = 295/337 (87%), Gaps = 10/337 (2%) Strand = Plus / Plus Query: 52 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 111 |||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 425 aaatttaaagcaataataaagagcagcccgggttaataaaactgagagaattaactcgga 484 Query: 112 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 171 ||| |||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 485 aag------tttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 538 Query: 172 gggaacgacagaacctatgattccataggattt----tattgaaaagaatcctaacactt 227 |||||||||| || |||||| | |||||||||| |||||||||||||||||| |||| Sbjct: 539 gggaacgacaaaagctatgactgcataggatttattttattgaaaagaatcctaatactt 598 Query: 228 cattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatt 287 |||||||||||||||||||||||||| ||| ||||||| |||| ||||||||| Sbjct: 599 cattgggtgggatggcggaacaaaccaaaaaaattgctttatttgttaaggttataaatt 658 Query: 288 aacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatac 347 ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||| |||||| Sbjct: 659 aacaaataagacaagaaagagtaaatattcgcccgcgaaatccttattggattcgaatac 718 Query: 348 tttaccgcgattcaataagagtaaaaataaggatatt 384 ||||| ||||||||||| ||||||||||||||||| Sbjct: 719 tttactatgattcaataagggtaaaaataaggatatt 755 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatatt 482 ||||||||||||||||||| ||| ||||||||||||| Sbjct: 795 tggatatattctagatcttttttcttgactatatatt 831
>gb|AF133480.1|AF133480 Zoysia matrella ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1204 Score = 347 bits (175), Expect = 2e-92 Identities = 296/337 (87%), Gaps = 5/337 (1%) Strand = Plus / Plus Query: 52 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 111 |||||| ||| ||||| ||||||| ||||| ||||||||||||||||||||| ||||||| Sbjct: 451 aaatttaaagaaataaaaaagagcagcccgcgttaataaaactgagaaaattgactcgga 510 Query: 112 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 171 ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 511 aagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 570 Query: 172 gggaacgacagaacctatgattccataggatt----ttattgaaaagaatcctaacactt 227 |||||||||| ||||||||| | ||||||||| ||||||||||||||||||| |||| Sbjct: 571 gggaacgacaaaacctatgactgcataggattgattttattgaaaagaatcctaatactt 630 Query: 228 cattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatt 287 |||||||||||||||||||||||||| ||| |||||||||||| ||||||||| Sbjct: 631 cattgggtgggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaatt 690 Query: 288 aacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatac 347 ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 691 aacaaataagacaagaaagagtaaatattcgcccgcgaaatctttattggattagaatag 750 Query: 348 tttaccgcgattcaataagagtaaaaataaggatatt 384 ||||| ||| || || |||| |||||||||||||| Sbjct: 751 tttactatgatcca-taggagtcaaaataaggatatt 786 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 449 atatattctagatcttcttttttgactatatatt 482 |||||||| ||||||||||| || |||||||||| Sbjct: 839 atatattccagatcttctttctttactatatatt 872
>gb|U62783.1|CSU62783 Chusquea sp. B ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 343 bits (173), Expect = 4e-91 Identities = 253/282 (89%), Gaps = 5/282 (1%) Strand = Plus / Plus Query: 52 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 111 |||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 413 aaatttgaagccataataaagagcggcccgggttaataaaactgagaaaatttactcgga 472 Query: 112 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 171 ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| | | Sbjct: 473 aagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtaat 532 Query: 172 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 231 |||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||| Sbjct: 533 gggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaatacttcatt 592 Query: 232 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaat 286 |||||||||||||||||||||| | | ||||||||||||| | ||||||| Sbjct: 593 gggtgggatggcggaacaaaccaaaaaaatggccttatttggtaaggttataatataaat 652 Query: 287 taacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 653 taacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 125 bits (63), Expect = 2e-25 Identities = 136/159 (85%), Gaps = 11/159 (6%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 412 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 413 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 472 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 473 actatatattatatttttctgttttaacaaattcaatat 511 |||| ||||||||||| |||||||||||| ||||| Sbjct: 816 acta-----tatatttttctattttaacaaattaaatat 849 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 858 cctaactttttctattatctattaatgtgcatctat 893
>gb|U54755.1|CWU54755 Chusquea windischii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1034 Score = 343 bits (173), Expect = 4e-91 Identities = 262/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 160 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 464 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 523 Query: 161 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 220 ||||||| ||||||||||||||||||||||| | | ||||||||| |||||||||||||| Sbjct: 524 ggagaagtagtgggaacgacagaacctatgactgcctaggatttttttgaaaagaatcct 583 Query: 221 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 279 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 643 Query: 280 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 ataatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 696 Score = 121 bits (61), Expect = 3e-24 Identities = 136/160 (85%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 701 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 757 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 758 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 817 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||||||||| Sbjct: 818 gacta-----tatatttttctattttaacaaattcaatat 852 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 861 cctaactttttctattatctattaatgtgcatctat 896
>gb|AY847103.1| Pohlidium petiolatum rpl16 gene, intron; chloroplast Length = 1018 Score = 339 bits (171), Expect = 6e-90 Identities = 260/292 (89%) Strand = Plus / Plus Query: 52 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 111 |||||| ||||||||| ||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 372 aaatttcaagcaataaaaaagagcagccccggttaataaaactgagaaaattgactcgga 431 Query: 112 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 171 ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 432 aagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 491 Query: 172 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 231 |||||||||| ||||||||| | |||||||||| |||||||||||||||| |||||||| Sbjct: 492 gggaacgacaaaacctatgactggataggatttttttgaaaagaatcctaatacttcatt 551 Query: 232 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaaca 291 |||||||||||||||||||||| | | |||||||||||| ||||||||||||| Sbjct: 552 gggtgggatggcggaacaaaccaaaaaaatggctttatttggtaaggttataaattaaca 611 Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 343 ||||||||||||||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 612 aataagacaggaaagggtaaacattcgcccgcgaaatctttattggattaga 663
>gb|AF133481.1|AF133481 Chloris distichophylla ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1180 Score = 337 bits (170), Expect = 2e-89 Identities = 325/378 (85%), Gaps = 12/378 (3%) Strand = Plus / Plus Query: 2 ataataaaactaatagagaatgaaaaattgtaactt--gaaagaagaactacaaatttta 59 ||||||||| ||| ||||||| ||||| |||| || |||| || || || |||||| | Sbjct: 395 ataataaaaataagagagaatttaaaatcgtaatttttgaaacaataaataaaaatttga 454 Query: 60 agcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaatt 119 |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| Sbjct: 455 agcaataataaagagcagcccaggttaataaaactaagaaaattaactcggaaag----- 509 Query: 120 ttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacga 179 ||||||| ||||||||| ||||||| ||||||||||| |||||||||| |||||||||| Sbjct: 510 -tttggaaactccgttgcaggattcaaacctaaccattaaaggagaagctgtgggaacga 568 Query: 180 cagaacctatgattccataggatt----ttattgaaaagaatcctaacacttcattgggt 235 || ||||||||| | ||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 569 caaaacctatgactgcataggattgattttattgaaaagaatcctaatacttcattgggc 628 Query: 236 gggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 295 |||||||||||||||||| |||||||||||| |||| ||||||||||||||||| Sbjct: 629 gggatggcggaacaaaccaaaaaaattgtcttatttgataaggttataaattaacaaata 688 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 689 agacaagaaagagtaaatattcgcccgcgaaatctttattggattagaatactttactat 748 Query: 356 gattcaataagagtaaaa 373 ||||||||||| |||||| Sbjct: 749 gattcaataagggtaaaa 766 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatatt 482 ||||||||||||||||||||||| || |||||||||| Sbjct: 820 tggatatattctagatcttctttctttactatatatt 856
>gb|AY847109.1| Zeugites munroanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 952 Score = 335 bits (169), Expect = 9e-89 Identities = 279/318 (87%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||| ||| Sbjct: 276 aaatcgtaacttgaaacaataaataaaaatttcaagcaataaaaaagagcagcccgagtt 335 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 336 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 395 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||| | ||||||||| | |||||||||| Sbjct: 396 aacctaaccattaaaggagaagctgtgggaacgaaaaaacctatgactagataggatttt 455 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 || |||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 456 atggaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 515 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| ||||||||||||||||||| |||||||||||||| |||| ||||||| Sbjct: 516 ttatttggtaaggttataaattaacaaataaggcaggaaagagtaaacattcccccgcga 575 Query: 326 aattcttattgaattaga 343 ||| |||||| |||||| Sbjct: 576 aatctttattggattaga 593
>gb|AY847108.1| Zeugites mexicanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1056 Score = 335 bits (169), Expect = 9e-89 Identities = 279/318 (87%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||| ||| Sbjct: 386 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagcccgagtt 445 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| || ||||||||||||||||||||||||| |||| ||||||| Sbjct: 446 aataaaactgagaaaattgacccggaaagaaattttttggaagctccattgcaggattca 505 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||| | ||||||||| | |||||||||| Sbjct: 506 aacctaaccattaaaggagaagctgtgggaacgaaaaaacctatgactggataggatttt 565 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 || |||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 566 atggaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 625 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 626 ttatttggtaaggttataaattaacaaataaggcaggaaagagtaaacattcgcccgcga 685 Query: 326 aattcttattgaattaga 343 ||| |||||| |||||| Sbjct: 686 aatctttattggattaga 703
>gb|AY847094.1| Centotheca lappacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 815 Score = 335 bits (169), Expect = 9e-89 Identities = 307/355 (86%), Gaps = 9/355 (2%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||| ||| || || || |||||| |||| ||| ||||||| ||| ||||| Sbjct: 52 aaatcgtaacttcaaacaataaataaaaatttaaagcggtaaaaaagagcagccggggtt 111 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| | ||||||| |||||||||||||||||| |||| ||||||| Sbjct: 112 aataaaactgagaaaattgattcggaaataaattttttggaagctccattgcaggattca 171 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||||| ||| ||||| | ||||||||||| Sbjct: 172 aacctaaccattaaaggagaagctgtgggaacgacaaaacttatgactgcataggatttt 231 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| Sbjct: 232 attgaaaagaatcctaatacttcattgggcgggatggcggaacaaaccaaaaaaattgct 291 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 351 Query: 326 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 380 | || |||||||||||||| | ||||||||||||| |||||||||||| Sbjct: 352 a--------tggattagaatacttta-cacgattcaataagaataaaaataagga 397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatatt 482 ||||||||||||||||||||||| |||||||| |||| Sbjct: 438 tggatatattctagatcttctttattgactatctatt 474 Score = 54.0 bits (27), Expect = 5e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 |||||||||||||||||| |||| ||| |||||||||| Sbjct: 505 cctaactttttctattatatattgatgtgtatctatcc 542
>gb|AY847110.1| Zeugites pringlei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1060 Score = 327 bits (165), Expect = 2e-86 Identities = 278/318 (87%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||| ||| Sbjct: 390 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagcccgagtt 449 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| || ||||||||||||||||||||||||| |||| ||||||| Sbjct: 450 aataaaactgagaaaattgacccggaaagaaattttttggaagctccattgcaggattca 509 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||| | ||||||||| | |||||||||| Sbjct: 510 aacctaaccattaaaggagaagctgtgggaacgaaaaaacctatgactggataggatttt 569 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 || |||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 570 atggaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 629 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| || |||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 630 ttatttggtaagattttaaattaacaaataaggcaggaaagagtaaacattcgcccgcga 689 Query: 326 aattcttattgaattaga 343 ||| |||||| |||||| Sbjct: 690 aatctttattggattaga 707
>gb|AF133491.1|AF133491 Joinvillea ascendens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1229 Score = 327 bits (165), Expect = 2e-86 Identities = 281/319 (88%), Gaps = 6/319 (1%) Strand = Plus / Plus Query: 62 caataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaatttt 121 |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 439 caataataaagagcaccctgggttaataaaactgagaaaattgactcggaaagaaatttt 498 Query: 122 tt-ggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 || ||||||||| ||||||| |||||||||||||||| | |||||||| ||||||||||| Sbjct: 499 tttggaagctccattgcggggttcagacctaaccattaatggagaagctgtgggaacgac 558 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 ||||||||||| | ||||||||| ||||||||| ||||||||| | |||||||||||||| Sbjct: 559 agaacctatgactgcataggattctattgaaaacgaatcctaagaattcattgggtggga 618 Query: 240 tggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaa----caaata 295 |||||||||||||| ||||||||||||||||| |||| |||| | | |||| Sbjct: 619 tggcggaacaaaccaagaaaattgtcttatttggtaaggttatgaattgaacctcgaata 678 Query: 296 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 355 ||||||||||||||||||||||||||||||||| |||||| |||| |||| ||| |||| Sbjct: 679 agacaggaaagagtaaatattcgcccgcgaaatctttattggattacaatattttgccgc 738 Query: 356 gattcaataagagtaaaaa 374 ||||| ||||||||||||| Sbjct: 739 gattcgataagagtaaaaa 757 Score = 48.1 bits (24), Expect = 0.032 Identities = 32/35 (91%) Strand = Plus / Plus Query: 532 actttttctattatctattaatgngtatctatccg 566 ||||||| ||||||||||||||| ||||| ||||| Sbjct: 919 actttttgtattatctattaatgtgtatccatccg 953
>gb|AY912198.1| Guadua angustifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1079 Score = 323 bits (163), Expect = 4e-85 Identities = 240/268 (89%), Gaps = 5/268 (1%) Strand = Plus / Plus Query: 38 gaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgag 97 |||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 292 gaaacaagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgag 351 Query: 98 aaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccatt 157 |||||| ||| |||||||||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 352 aaaattgacttggaaagaaattttttggaagctccattgtggaattcagacctaaccatt 411 Query: 158 caaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaat 217 ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 412 aaaggagaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaat 471 Query: 218 cctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaag 277 ||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 472 cctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaag 531 Query: 278 tt-----tataaattaacaaataagaca 300 | ||||||||||||||||||||| Sbjct: 532 gttctaatataaattaacaaataagaca 559 Score = 190 bits (96), Expect = 3e-45 Identities = 163/185 (88%), Gaps = 14/185 (7%) Strand = Plus / Plus Query: 333 attgaattagaatactttaccgcgattcaataagagtaaaaataaggatatttttt---- 388 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 562 attgaattagaatactttaccgcgattcaataagagtaaaaataaggagatttttttttt 621 Query: 389 --agaaggactacattattatctataaatatagaatttagataaatatccacacacatct 446 ||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||| Sbjct: 622 taagaaggattacattat---ctataaatatagaatatagataaatagacacacacatct 678 Query: 447 ggatatattctagatcttcttttttgactatatattatatttttctgttttaacaaattc 506 ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||| Sbjct: 679 agatatattctagatcttctttcttgacta-----tatatttttctattttaacaaattc 733 Query: 507 aatat 511 ||||| Sbjct: 734 aatat 738 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 755 cctaactttttctattatctattaatgtgcatctatccg 793
>gb|AF133478.1|AF133478 Sorghum bicolor ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1200 Score = 323 bits (163), Expect = 4e-85 Identities = 258/293 (88%), Gaps = 8/293 (2%) Strand = Plus / Plus Query: 82 ggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcggga 141 |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| Sbjct: 478 ggttaataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcagga 537 Query: 142 ttcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagga 201 |||| ||||||||||| |||||||||| |||||||||||| | ||||||| | ||||||| Sbjct: 538 ttcaaacctaaccattaaaggagaagctgtgggaacgacaaagcctatgactacatagga 597 Query: 202 ttttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnt 261 |||||||| ||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 598 ttttattggaaagaatcctaactcttcattgggtgggatggcggaacaaaccaaaaaatt 657 Query: 262 tgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgccc 321 || ||||||| |||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 658 tgctttatttgataaggttctaaattaacaaataagacaggaaagagtaaatattcgccc 717 Query: 322 gcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 374 ||||||| | ||||||||||||||| ||||||||||||| |||||| Sbjct: 718 gcgaaatcc--------ttagaatactttaccacgattcaataagaataaaaa 762 Score = 73.8 bits (37), Expect = 6e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 448 gatatattctagatcttcttttttgactatatattatatttttctgttttaacaaattca 507 ||||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct: 815 gatatattctagatcttctttcttgactatatatt-tatttttcttttttaagaaagtca 873 Query: 508 a 508 | Sbjct: 874 a 874
>gb|AY847105.1| Zeugites americanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 944 Score = 319 bits (161), Expect = 6e-84 Identities = 278/318 (87%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||| ||| Sbjct: 276 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagcccgagtt 335 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| || ||||||||||||||||||||||||| |||| ||||||| Sbjct: 336 aataaaactgagaaaattgacccggaaagaaattttttggaagctccattgcaggattca 395 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||| | ||||||||| | |||||||||| Sbjct: 396 aacctaaccattaaaggagaagctgtgggaacgaaaaaacctatgactggataggatttt 455 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 || |||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 456 atggaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 515 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||||||| Sbjct: 516 ttatttggtaaggttataaa-taacaaataaggcaggaaagagtaaacattcgcccgcga 574 Query: 326 aattcttattgaattaga 343 ||| |||||| |||||| Sbjct: 575 aatctttattggattaga 592
>gb|AF133490.1|AF133490 Streptochaeta angustifolia ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1243 Score = 319 bits (161), Expect = 6e-84 Identities = 288/330 (87%), Gaps = 7/330 (2%) Strand = Plus / Plus Query: 63 aataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaatttt- 121 ||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| Sbjct: 478 aataataaagagcaacctgggttaataaaactgagaaaatggactcggaaagaaattttg 537 Query: 122 ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgaca 181 ||||||||||| |||| || |||||||||||||||| |||||||| |||||||||||| Sbjct: 538 ttggaagctccattgcagggttcagacctaaccattagtggagaagctgtgggaacgaca 597 Query: 182 gaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggat 240 |||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 598 gaacctatgactacataggattttattgaaaacgaatcctaatacttcattgggtgggat 657 Query: 241 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 300 ||||||||||||| ||| |||||||||||| || | |||| || ||||||||| Sbjct: 658 ggcggaacaaaccaaaaaaattgctttatttggtaaggttttgaattgacgaataagaca 717 Query: 301 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaa-----tactttaccgc 355 |||||||||||||||||||||||||||| |||||| |||| || |||||||||| Sbjct: 718 ggaaagagtaaatattcgcccgcgaaatctttattggattacaatactttactttaccgt 777 Query: 356 gattcaataagagtaaaaataaggatattt 385 ||||||||||||||||||||||||| |||| Sbjct: 778 gattcaataagagtaaaaataaggagattt 807 Score = 56.0 bits (28), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 532 actttttctattatctattaatgngtatctatccg 566 ||||||| ||||||||||||||| ||||||||||| Sbjct: 937 actttttgtattatctattaatgtgtatctatccg 971 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Plus Query: 424 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatat 481 |||||||||| |||| |||||| |||| ||| || |||||||| |||||||||||| Sbjct: 844 tagataaatagacacagacatctagatagattttatctcttctttcttgactatatat 901
>gb|U62792.1|CNU62792 Chusquea nudiramea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1034 Score = 319 bits (161), Expect = 6e-84 Identities = 259/293 (88%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 43 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 102 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 103 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 160 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 464 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 523 Query: 161 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 220 ||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct: 524 ggagaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcct 583 Query: 221 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 279 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 643 Query: 280 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 328 |||||||| |||| ||||||||| ||||||| | ||||||||||||||| Sbjct: 644 ataatataaattgacaattaagacaggcaagagtatacattcgcccgcgaaat 696 Score = 121 bits (61), Expect = 3e-24 Identities = 136/160 (85%), Gaps = 12/160 (7%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 411 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 701 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 757 Query: 412 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 471 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 758 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 817 Query: 472 gactatatattatatttttctgttttaacaaattcaatat 511 ||||| ||||||||||| |||||||||||||||||| Sbjct: 818 gacta-----tatatttttctattttaacaaattcaatat 852 Score = 58.0 bits (29), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctat 563 ||||||||||||||||||||||||||| | |||||| Sbjct: 861 cctaactttttctattatctattaatgtgcatctat 896
>gb|AF133464.1|AF133464 Lithachne pauciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1189 Score = 317 bits (160), Expect = 2e-83 Identities = 321/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 1 tataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaa 60 |||||||||| || |||||||| |||| ||||||||||| ||||| || ||||||||| Sbjct: 383 tataataaaaatattagagaatttgaaatcgtaacttgaaacaagaaatataaattttaa 442 Query: 61 gcaata-----ataaagagccgcccgggttaataaaactgagaaaattaactcggaaaga 115 |||||| |||| |||| | ||||||||||||||||||||||| |||| |||||| Sbjct: 443 gcaatacaataataaggagcaactggggttaataaaactgagaaaattgactcagaaaga 502 Query: 116 aattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtggga 175 ||||||||||| |||| ||| || ||||||||||||||||| ||||||||| ||||||| Sbjct: 503 tattttttggaaactccattgtggaattcagacctaaccattaaaggagaagtagtggga 562 Query: 176 acgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt--gg 233 |||| ||||||||||| | |||| ||||| ||||||||||| |||| ||||||| || Sbjct: 563 acgatagaacctatgactgtatagaatttttttgaaaagaattctaattcttcattaggg 622 Query: 234 gtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaa 293 | |||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 623 gagggatggcggaacaaaccaaaaaaattgtcttatttagtaaggttataaattaacaaa 682 Query: 294 taagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttacc 353 ||||| ||||||||||||||||||||||||||||| ||||||||| | ||| ||||||| Sbjct: 683 taagataggaaagagtaaatattcgcccgcgaaatccttattgaagtggaaaactttact 742 Query: 354 gcgattcaataagagt 369 |||||||||||||||| Sbjct: 743 gcgattcaataagagt 758 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%), Gaps = 5/73 (6%) Strand = Plus / Plus Query: 439 acacatctggatatattctagatcttcttttttgactatatattatatttttctgtttta 498 |||||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||| Sbjct: 802 acacatctagatatattctagatcttttttcttgacta-----tatatttttctatttta 856 Query: 499 acaaattcaatat 511 |||||||| |||| Sbjct: 857 acaaattccatat 869 Score = 63.9 bits (32), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 ||||||||||||||||||||||||||| | ||||||||| Sbjct: 879 cctaactttttctattatctattaatgtgcatctatccg 917
>gb|AF133479.1|AF133479 Eleusine indica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1091 Score = 307 bits (155), Expect = 2e-80 Identities = 286/332 (86%), Gaps = 10/332 (3%) Strand = Plus / Plus Query: 52 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 111 |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| Sbjct: 451 aaattttaagcaataataaagagcagcccaggttaataaaactaagaaaattaactcgga 510 Query: 112 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 171 ||| ||||||||||||||||| ||||||| ||||||||||| |||||||||| || Sbjct: 511 aagtttaagtttggaagctccgttgcaggattcaaacctaaccattaaaggagaagctgt 570 Query: 172 gggaacgacagaacctatgattccatag----gattttattgaaaagaatcctaacactt 227 |||||||||| ||||||||| | ||||| ||||||||||||||||||||||| |||| Sbjct: 571 gggaacgacaaaacctatgactgcataggattgattttattgaaaagaatcctaatactt 630 Query: 228 cattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggt------aagttta 281 ||||||| |||||||||||||||||| |||| ||||||| | ||| ||| Sbjct: 631 cattgggcgggatggcggaacaaaccaaaaaaattgttttatttgattttaataaggtta 690 Query: 282 taaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaatta 341 ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||| Sbjct: 691 taaattaacaaataagacaagaaagagtaaatattcgcccgcgaaatctttattggatta 750 Query: 342 gaatactttaccgcgattcaataagagtaaaa 373 ||||||||||| ||||||||||| |||||| Sbjct: 751 gaatactttactatgattcaataagggtaaaa 782 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 447 ggatatattctagatcttcttttttgactatatatt 482 |||||||||||||||||||||| ||||||||||||| Sbjct: 839 ggatatattctagatcttctttcttgactatatatt 874
>gb|AY847101.1| Orthoclada laxa ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1068 Score = 301 bits (152), Expect = 1e-78 Identities = 278/322 (86%), Gaps = 4/322 (1%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||| ||||||| || || | ||||||| ||||||||| ||||||| ||||||||| Sbjct: 395 aaatcgtaccttgaaacaataaatccaaatttaaagcaataaaaaagagcagcccgggtt 454 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 ||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||| Sbjct: 455 aataaaactgagaaaatgggctcggaaagaaattttttggaagctccattgcagaattca 514 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagg----a 201 |||||||||| |||||||||| |||||||||||| ||||||||| | ||||| | Sbjct: 515 atcctaaccattaaaggagaagctgtgggaacgacaaaacctatgactggataggattta 574 Query: 202 ttttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnt 261 ||||||||||||||||||||| | |||||||||||||||||||||||||||| | Sbjct: 575 ttttattgaaaagaatcctaatatttcattgggtgggatggcggaacaaaccaaaaaaat 634 Query: 262 tgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgccc 321 | |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 635 ggctttatttggtaaggttataaattaacaaataagacaggaaagagtaaacattcgccc 694 Query: 322 gcgaaattcttattgaattaga 343 ||||||| |||||| |||||| Sbjct: 695 gcgaaatctttattggattaga 716 Score = 46.1 bits (23), Expect = 0.12 Identities = 34/38 (89%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatcc 565 |||||||||||||||||| ||| ||| |||||||||| Sbjct: 755 cctaactttttctattatagattgatgtgtatctatcc 792
>gb|AY847104.1| Zeugites sylvaticus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1051 Score = 293 bits (148), Expect = 3e-76 Identities = 208/228 (91%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||| ||||||||||| || || || ||||| ||||||||| ||||||| ||||||||| Sbjct: 370 aaatcgtaacttgaaacaataaataaaaattgcaagcaataaaaaagagcagcccgggtt 429 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 430 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 489 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 ||||||||||| |||||||||| |||||||||||| ||||||||| | |||||||||| Sbjct: 490 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactggataggatttt 549 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaacc 253 ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 550 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaacc 597 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| | Sbjct: 609 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcta 668 Query: 326 aattcttattgaattaga 343 |||| |||||| |||||| Sbjct: 669 aatttttattggattaga 686
>gb|AY847077.1| Stipagrostis zeyheri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1146 Score = 285 bits (144), Expect = 8e-74 Identities = 237/268 (88%), Gaps = 3/268 (1%) Strand = Plus / Plus Query: 32 taacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaa 91 |||||||||| || || || |||||| ||||||||||||||||| || |||||||||||| Sbjct: 403 taacttgaaacaaaaaataaaaatttaaagcaataataaagagcagctcgggttaataaa 462 Query: 92 actgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagaccta 151 |||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 463 actgagaaaattgactcggaaagaaattttttggaagctccattgcaggattcaaaccta 522 Query: 152 accattcaaggagaagcagtgggaacgacagaacctatgattccatagga--ttttattg 209 |||||| |||||||||| |||||||||||| ||||||||| | ||||||| |||| ||| Sbjct: 523 accattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttttttttg 582 Query: 210 aaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttat 269 ||||||||||||| |||||||||||||||||||||||||||||| ||| |||| Sbjct: 583 aaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgctttat 642 Query: 270 ttggtaagtttataaattaacaaataag 297 ||||| || ||||||||||||||||||| Sbjct: 643 ttggt-agattataaattaacaaataag 669 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 332 tattgaattagaatactttaccgcgattcaataagagtaaaaa 374 ||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 670 tattggattagaatactttaccacgattcaataagagtaaaaa 712
>gb|AY847111.1| Zeugites sagittatus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1018 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Plus Query: 16 agagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagc 75 ||||||| | |||| ||||||||||| || || | ||||| ||||||||| ||||||| Sbjct: 333 agagaattagaaatcgtaacttgaaacaataaaaaaaaattgcaagcaataaaaaagagc 392 Query: 76 cgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgtt 135 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 393 agcccgggttaataaaactgagaaaattgactcggaaagaaattttttggaagctccatt 452 Query: 136 gcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattcc 195 || ||||||| ||||||||||| |||||||||| |||||||||||| ||||||||| | Sbjct: 453 gcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgg 512 Query: 196 ataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaacc 253 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 513 ataggattttattgaaaagaatcctaatacttcattgggggggatggcggaacaaacc 570 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 582 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcga 641 Query: 326 aattcttattgaattaga 343 ||| |||||| |||||| Sbjct: 642 aatctttattggattaga 659
>gb|AY847102.1| Lophatherum gracile ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1078 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Plus Query: 16 agagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagc 75 ||||||| | |||| ||||||||||| || || | ||||| ||||||||| ||||||| Sbjct: 393 agagaattagaaatcgtaacttgaaacaataaaaaaaaattgcaagcaataaaaaagagc 452 Query: 76 cgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgtt 135 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 453 agcccgggttaataaaactgagaaaattgactcggaaagaaattttttggaagctccatt 512 Query: 136 gcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattcc 195 || ||||||| ||||||||||| |||||||||| |||||||||||| ||||||||| | Sbjct: 513 gcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgg 572 Query: 196 ataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaacc 253 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 573 ataggattttattgaaaagaatcctaatacttcattgggggggatggcggaacaaacc 630 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 642 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcga 701 Query: 326 aattcttattgaattaga 343 ||| |||||| |||||| Sbjct: 702 aatctttattggattaga 719
>gb|AY847113.1| Micraira lazaridis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 757 Score = 278 bits (140), Expect = 2e-71 Identities = 214/238 (89%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 59 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 118 ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 90 aagcattaataaagagtagcccgggttaataaaactgagaaaattgactcggaaataaat 149 Query: 119 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 178 |||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 150 tttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacg 209 Query: 179 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 238 ||| ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 210 acaaaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtggg 269 Query: 239 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataa 296 ||||||||||||||| ||| |||||||||||| |||||||||||||||||| Sbjct: 270 atggcggaacaaacc-aaaaaattgctttatttggtaag-ttataaattaacaaataa 325 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatatt 482 ||||||||||||||||||||||| || |||||||||| Sbjct: 418 tggatatattctagatcttctttctttactatatatt 454 Score = 52.0 bits (26), Expect = 0.002 Identities = 49/54 (90%), Gaps = 2/54 (3%) Strand = Plus / Plus Query: 332 tattgaattagaatactttaccgcgattcaata-agagtaaaaataaggatatt 384 ||||| |||||||||||||||| ||||| |||| ||||||||||||||| |||| Sbjct: 326 tattgtattagaatactttaccacgatt-aatatagagtaaaaataagggtatt 378
>gb|AY847098.1| Chasmanthium latifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1132 Score = 274 bits (138), Expect = 3e-70 Identities = 273/318 (85%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 26 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 85 |||||||||||||||| || || || ||||| ||||||||| ||||||| ||| ||||| Sbjct: 365 aaattgtaacttgaaacaataaataaaaattgaaagcaataaaaaagagcagcctgggtt 424 Query: 86 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 145 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 425 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 484 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 |||||||||| |||||||||| |||||||||| | ||||||||| | ||||||||||| Sbjct: 485 aacctaaccatgaaaggagaagctgtgggaacgagaaaacctatgactgcataggatttt 544 Query: 206 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 265 ||||||||||||||||| ||||||||||||||||||||||| | | || ||| Sbjct: 545 attgaaaagaatcctaatacttcattgggtgggatggcggacctagccaaaaaaattgct 604 Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| |||| |||| |||| | ||| || | |||||||||||||||||||| Sbjct: 605 ttatttggtaaggttatcaatt-acaa--aggactggcatgagtaaatattcgcccgcga 661 Query: 326 aattcttattgaattaga 343 ||| |||||| |||||| Sbjct: 662 aatctttattggattaga 679 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactat 477 ||||||||||||||||||||||| |||||||| Sbjct: 754 tggatatattctagatcttctttcttgactat 785 Score = 40.1 bits (20), Expect = 7.7 Identities = 34/39 (87%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||| ||||||||||||| |||| || ||||||||||| Sbjct: 822 cctacctttttctattatatattgatatgtatctatccg 860
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Minus Query: 66 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 125 |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 80530 aataaagagcagcc-gggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 80474 Query: 126 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 185 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 80473 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 80414 Query: 186 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 245 |||||| | ||||||| ||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 80413 ctatgactacatagga-tttattg-aaagaatcctaacacttcattgg--tggatggcgg 80358 Query: 246 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 305 ||||||| ||| ||||||| |||| || |||||||||||||||||||||||| Sbjct: 80357 -acaaacc-acaaaattgctttatttgataaggttctaaattaacaaataagacaggaaa 80300 Query: 306 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 365 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 80299 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 80240 Query: 366 gagtaaaaa 374 || |||||| Sbjct: 80239 gaataaaaa 80231 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 446 tggatatattctagatcttcttttttgactatatattatatttttctgttttaa 499 ||||||||||||||||||||||| ||||||||||||| |||||||| |||||| Sbjct: 80179 tggatatattctagatcttctttcttgactatatatttaatttttcttttttaa 80126 Score = 52.0 bits (26), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Minus Query: 528 cctaactttttctattatctattaatgngtatctatc 564 |||||||||||||||||| |||| ||| ||||||||| Sbjct: 80099 cctaactttttctattatatattgatgtgtatctatc 80063
>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA Length = 1368 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Plus Query: 66 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 125 |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 47 aataaagagcagcc-gggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 103 Query: 126 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 185 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 104 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 163 Query: 186 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 245 |||||| | |||||||||| ||||||| |||||||||||||||||||| ||||||||| Sbjct: 164 ctatgactacataggattt-attgaaa-gaatcctaacacttcattggt--ggatggcgg 219 Query: 246 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 305 | |||||| ||| ||||||| |||| || |||||||||||||||||||||||| Sbjct: 220 a-caaaccacaaaa-ttgctttatttgataaggttctaaattaacaaataagacaggaaa 277 Query: 306 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 365 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 278 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 337 Query: 366 gagtaaaaa 374 || |||||| Sbjct: 338 gaataaaaa 346 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactatatattatatttttctgttttaa 499 ||||||||||||||||||||||| ||||||||||||| |||||||| |||||| Sbjct: 398 tggatatattctagatcttctttcttgactatatatttaatttttcttttttaa 451 Score = 52.0 bits (26), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatc 564 |||||||||||||||||| |||| ||| ||||||||| Sbjct: 478 cctaactttttctattatatattgatgtgtatctatc 514
>gb|AY847106.1| Zeugites capillaris ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1062 Score = 270 bits (136), Expect = 5e-69 Identities = 199/220 (90%) Strand = Plus / Plus Query: 34 acttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaac 93 |||||||| || || || ||||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 404 acttgaaacaataaataaaaattgcaagcaataaaaaagagcagcccgggttaataaaac 463 Query: 94 tgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaac 153 |||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||| Sbjct: 464 tgagaaaattgactcggaaagaaattttttggaagctccattgcaggattcaagcctaac 523 Query: 154 cattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaa 213 |||| |||||||||| |||||||||||| ||||||||| | |||||||||||||||||| Sbjct: 524 cattaaaggagaagctgtgggaacgacaaaacctatgactggataggattttattgaaaa 583 Query: 214 gaatcctaacacttcattgggtgggatggcggaacaaacc 253 |||||||| |||||||||||||||||||||||||||||| Sbjct: 584 aaatcctaatacttcattgggtgggatggcggaacaaacc 623 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 266 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 325 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 634 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcga 693 Query: 326 aat 328 ||| Sbjct: 694 aat 696
>gb|AY847097.1| Chasmanthium curvifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 982 Score = 270 bits (136), Expect = 5e-69 Identities = 210/237 (88%) Strand = Plus / Plus Query: 59 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 118 ||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 424 aagcaataaaaaagagcagcctgggttaataaaactgagaaaattgactcggaaagaaat 483 Query: 119 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 178 |||||||||||||| |||| ||||||| |||||||||| |||||||||| ||||||||| Sbjct: 484 tttttggaagctccattgcaggattcaaacctaaccatgaaaggagaagctgtgggaacg 543 Query: 179 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 238 | | ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 544 agaaaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtggg 603 Query: 239 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 295 |||||||||||| || ||| ||||||||| || ||||||||||||||||| Sbjct: 604 atggcggaacaagccaaaaaaattgctttatttggttaggttataaattaacaaata 660 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 446 tggatatattctagatcttcttttttgactat 477 ||||||||||||||||||||||| |||||||| Sbjct: 719 tggatatattctagatcttctttcttgactat 750 Score = 48.1 bits (24), Expect = 0.032 Identities = 35/39 (89%) Strand = Plus / Plus Query: 528 cctaactttttctattatctattaatgngtatctatccg 566 |||||||||||||||||| |||| || ||||||||||| Sbjct: 788 cctaactttttctattatatattgatatgtatctatccg 826
>dbj|AP007101.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: SES205A, clone: SSE-79kb Length = 671 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007100.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Jw385, clone: SJw-79kb Length = 672 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007099.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Glagah, clone: SGl-79kb Length = 671 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007098.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: COL/PAPUA N.G/TARC/E12, clone: EPN-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007097.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: IN95-009, clone: EIN-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007096.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Ooshima, clone: SiO-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007095.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Chunnee, clone: BCh-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007094.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Tekcha, clone: SiTe-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007093.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Kewali14, clone: BKe-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007092.1| Saccharum robustum chloroplast gene for ribosomal protein L16, exon 2, partial sequence Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007091.1| Saccharum robustum chloroplast gene for ribosomal protein L16, partial cds, strain: 6, clone: R6-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007090.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Fiji40, clone: OFi-79kb Length = 665 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007089.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Badila, clone: OBa-79kb Length = 665 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 50 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 108 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 109 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 168 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 169 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 228 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 229 attgggtgggatggcggaaca 249 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA Length = 1742 Score = 226 bits (114), Expect = 6e-56 Identities = 193/218 (88%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 155 ttgaaacaagaaatacaaatttcaaggaataacaaagagtgtcccgagttaataaaactg 214 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || ||| |||||||||||||||||||||||| ||| | |||| | ||||||||| Sbjct: 215 agaaa-ttgacttggaaagaaattttttggaagctccattgtgagattaaaacctaacca 273 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || |||||||||| |||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 274 ttaaaggagaagccgtgggaacgacagaacctatgactggataggattttcttgaaaaga 333 Query: 216 atcctaacacttcattgggtgggatggcggaacaaacc 253 |||| || |||||||||||||||||||||||||||||| Sbjct: 334 atcccaatacttcattgggtgggatggcggaacaaacc 371 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 287 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 346 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 392 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 451 Query: 347 ctttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||| Sbjct: 452 ctttaccgcgattcaataagagtaaaa 478 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 511 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 570 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 571 tgactatatatt 582
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 226 bits (114), Expect = 6e-56 Identities = 193/218 (88%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 36 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 95 |||||| ||||| ||||||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 76602 ttgaaacaagaaatacaaatttcaaggaataacaaagagtgtcccgagttaataaaactg 76661 Query: 96 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 155 ||||| || ||| |||||||||||||||||||||||| ||| | |||| | ||||||||| Sbjct: 76662 agaaa-ttgacttggaaagaaattttttggaagctccattgtgagattaaaacctaacca 76720 Query: 156 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 215 || |||||||||| |||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 76721 ttaaaggagaagccgtgggaacgacagaacctatgactggataggattttcttgaaaaga 76780 Query: 216 atcctaacacttcattgggtgggatggcggaacaaacc 253 |||| || |||||||||||||||||||||||||||||| Sbjct: 76781 atcccaatacttcattgggtgggatggcggaacaaacc 76818 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 287 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 346 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 76839 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 76898 Query: 347 ctttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||| Sbjct: 76899 ctttaccgcgattcaataagagtaaaa 76925 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 76958 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 77017 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 77018 tgactatatatt 77029
>ref|XM_450631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 99 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 158 ||||| ||| |||||||||||||||||||||||| ||| | |||| | ||||||||||| Sbjct: 2 aaattgacttggaaagaaattttttggaagctccattgtgagattaaaacctaaccatta 61 Query: 159 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 218 |||||||||| |||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagccgtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 219 ctaacacttcattgggtgggatggcggaacaaacc 253 | || |||||||||||||||||||||||||||||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaacc 156 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 287 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 346 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 177 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 236 Query: 347 ctttaccgcgattcaataagagtaaaa 373 ||||||||||||||||||||||||||| Sbjct: 237 ctttaccgcgattcaataagagtaaaa 263 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 296 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 355 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 356 tgactatatatt 367
>gb|AF276969.1| Spartina anglica ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 5e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 200 gattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnn 259 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 41 gattttattgaaaagaatcctaatacttcattggg-gggatggcggaacaaaccaaaaaa 99 Query: 260 nttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgc 319 ||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 attgctttatttggtaaggttataaattaacaaataagacaagaaagagtaaatattcgc 159 Query: 320 ccgcgaaattcttattgaattagaatactttaccgcgattcaataag 366 ||||||||| |||||| ||||||||||||||| ||||||||||| Sbjct: 160 ccgcgaaatctttattggattagaatactttactatgattcaataag 206 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatt 384 ||||||||||| |||||||||||||||| Sbjct: 244 gattcaataaggttaaaaataaggatatt 272
>gb|AF276968.1| Spartina alterniflora ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 5e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 200 gattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnn 259 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 41 gattttattgaaaagaatcctaatacttcattggg-gggatggcggaacaaaccaaaaaa 99 Query: 260 nttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgc 319 ||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 attgctttatttggtaaggttataaattaacaaataagacaagaaagagtaaatattcgc 159 Query: 320 ccgcgaaattcttattgaattagaatactttaccgcgattcaataag 366 ||||||||| |||||| ||||||||||||||| ||||||||||| Sbjct: 160 ccgcgaaatctttattggattagaatactttactatgattcaataag 206 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatt 384 ||||||||||| |||||||||||||||| Sbjct: 244 gattcaataaggttaaaaataaggatatt 272
>gb|AF133489.1|AF133489 Anomochloa marantoidea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 184 bits (93), Expect = 2e-43 Identities = 152/169 (89%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 87 ataaaactgagaaaattaactcggaaagaaatttt-ttggaagctccgttgcgggattca 145 |||||||||||||||| ||||||||| |||||| ||||||||||| |||| || |||| Sbjct: 464 ataaaactgagaaaatggactcggaaataaatttggttggaagctccattgcagggttca 523 Query: 146 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 205 |||||||||||| | |||||||| ||||||||||||||||| |||| | ||||||||| | Sbjct: 524 gacctaaccattaatggagaagctgtgggaacgacagaacccatgactgcataggattct 583 Query: 206 attgaaaa-gaatcctaacacttcattgggtgggatggcggaacaaacc 253 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 584 tttgaaaacgaatcctaacacttcattgggtgggatggcggaacaaacc 632 Score = 65.9 bits (33), Expect = 1e-07 Identities = 79/93 (84%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 297 gacaggaaagagtaaatattcgcccgcgaaattcttatt-gaattagaatactttaccgc 355 |||||||||||||||||||||||||||||||| ||||| | | | |||||||| || Sbjct: 690 gacaggaaagagtaaatattcgcccgcgaaatctttattatagtaacaatactttcccat 749 Query: 356 gattcaataagagtaaaaataaggatatttttt 388 |||||||||||| |||||| || || ||||||| Sbjct: 750 gattcaataagaataaaaagaaagagatttttt 782 Score = 50.1 bits (25), Expect = 0.008 Identities = 30/32 (93%) Strand = Plus / Plus Query: 535 ttttctattatctattaatgngtatctatccg 566 |||| ||||||||||||||| ||||||||||| Sbjct: 919 ttttgtattatctattaatgtgtatctatccg 950 Score = 44.1 bits (22), Expect = 0.49 Identities = 46/53 (86%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 425 agataaatatccacacacatctggatatattctagatcttcttttttgactat 477 |||||||||| |||||| ||| ||||||||||| |||||||| |||||||| Sbjct: 826 agataaatat--acacacgtctagatatattctatctcttctttcttgactat 876
>gb|AF276970.1| Spartina maritima ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 656 Score = 180 bits (91), Expect = 3e-42 Identities = 136/152 (89%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 200 gattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnn 259 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 41 gattttattgaaaagaatcctaatacttcattggg-gggatggcggaacaaaccaaaaaa 99 Query: 260 nttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgc 319 ||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 attgctttatttggtaaggttataaattaacaaataagacaagaaagagtaaatattcgc 159 Query: 320 ccgcgaaattcttattgaattagaatacttta 351 ||||||||| |||||| |||||||||||||| Sbjct: 160 ccgcgaaatctttattggattagaatacttta 191 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 356 gattcaataagagtaaaaataaggatatt 384 ||||||||||| |||||||||||||||| Sbjct: 220 gattcaataaggttaaaaataaggatatt 248
>gb|AY855878.1| Musa textilis voucher NEU0001 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1033 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>gb|AY855877.1| Musa troglodytarum voucher NEU0388 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>gb|AY855876.1| Musa troglodytarum voucher NEU0385 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>gb|AY855875.1| Musa jackeyi voucher NEU0389 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||||||||| | Sbjct: 24915926 taaatatagaatatagataaataaacatacacatctagatatattctagatcttctttct 24915985 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 24915986 tgactatatatt 24915997 Score = 54.0 bits (27), Expect = 5e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 331 ttattgaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 24915853 ttattgaattagaa-actttaccacgatttaataagagtaaaa 24915894 Score = 52.0 bits (26), Expect = 0.002 Identities = 48/54 (88%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 77 gcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagct 130 ||||||||||||||||||| ||||| | | ||||||||| | |||||||||||| Sbjct: 10696488 gcccgggttaataaaactgtgaaaa-tgattcggaaagagaatttttggaagct 10696436
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 411 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 470 |||||||||||| |||||||||| || |||||||| ||||||||||||||||||||| | Sbjct: 77209 taaatatagaatatagataaataaacatacacatctagatatattctagatcttctttct 77268 Query: 471 tgactatatatt 482 |||||||||||| Sbjct: 77269 tgactatatatt 77280 Score = 54.0 bits (27), Expect = 5e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 331 ttattgaattagaatactttaccgcgattcaataagagtaaaa 373 |||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 77136 ttattgaattagaa-actttaccacgatttaataagagtaaaa 77177
>gb|AY500680.1| Physocarpus opulifolius voucher JSh1015 rpl16 gene, intron; chloroplast Length = 932 Score = 93.7 bits (47), Expect = 6e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 128 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 187 ||||||||| | ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 404 gctccgttgtagaattcagacctaaccattaatcgagaagtggtgggaacgacagaacct 463 Query: 188 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 246 ||| | |||| |||| ||||||||| ||||||||| |||||||||| |||||||||| Sbjct: 464 gtgaatgcataagattctattgaaaacgaatcctaatgattcattgggtaggatggcgga 523 Query: 247 acaaacc 253 || |||| Sbjct: 524 acgaacc 530 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 302 gaaagagtaaatattcgcccgcgaa 326 ||||||||||||||||||||||||| Sbjct: 591 gaaagagtaaatattcgcccgcgaa 615
>gb|AY727405.1| Trillium ovatum rpL16 gene, intron; chloroplast Length = 988 Score = 93.7 bits (47), Expect = 6e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 128 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 187 ||||| |||| | |||||| |||||||||| | || ||||| |||||||||||||||| Sbjct: 435 gctccattgcagaattcaggcctaaccattaatggcgaagctatgggaacgacagaaccc 494 Query: 188 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 246 ||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 495 gtgattgtataggattctattgaaaacgaatcctaatgattcattgggtgggatggcgga 554 Query: 247 acaaacc 253 || |||| Sbjct: 555 acgaacc 561 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 gaaagagtaaatattcgcccgcgaa 326 |||||||| |||||||||||||||| Sbjct: 625 gaaagagtcaatattcgcccgcgaa 649
>gb|AY855889.1| Musa x paradisiaca voucher TM128 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855888.1| Musa x paradisiaca voucher ITC0677 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855886.1| Musa x paradisiaca voucher ITC0983 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855885.1| Musa x paradisiaca voucher TM139 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855884.1| Musa acuminata voucher TM71 (QSG) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855881.1| Musa banksii voucher ITC0254 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855880.1| Musa acuminata subsp. malaccensis voucher ITC0250 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855879.1| Musa acuminata subsp. malaccensis voucher TM68 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 63 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 121 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 122 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 180 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 181 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 239 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 240 tggcggaacaaacc 253 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 292 aataagacaggaaagagtaaatattcgcccgcgaaa 327 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|DQ100233.1| Purshia tridentata voucher 20A ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 787 Score = 89.7 bits (45), Expect = 9e-15 Identities = 103/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 128 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 187 ||||||||| | ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 391 gctccgttgtagaattcagacctaaccattaatcgagaagtggtgggaacgacagaacct 450 Query: 188 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 246 ||| | |||| |||| ||||||||| ||||||||| |||||||||| |||||||||| Sbjct: 451 gtgaatgcataagattctattgaaaacgaatcctaatgattcattgggtaggatggcgga 510 Query: 247 a 247 | Sbjct: 511 a 511 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 302 gaaagagtaaatattcgcccgcgaa 326 ||||||||||||||||||||||||| Sbjct: 578 gaaagagtaaatattcgcccgcgaa 602
>gb|DQ100231.1| Purshia tridentata voucher 1-1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 787 Score = 89.7 bits (45), Expect = 9e-15 Identities = 103/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 128 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 187 ||||||||| | ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 391 gctccgttgtagaattcagacctaaccattaatcgagaagtggtgggaacgacagaacct 450 Query: 188 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 246 ||| | |||| |||| ||||||||| ||||||||| |||||||||| |||||||||| Sbjct: 451 gtgaatgcataagattctattgaaaacgaatcctaatgattcattgggtaggatggcgga 510 Query: 247 a 247 | Sbjct: 511 a 511 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 302 gaaagagtaaatattcgcccgcgaa 326 ||||||||||||||||||||||||| Sbjct: 578 gaaagagtaaatattcgcccgcgaa 602
>gb|DQ100229.1| Purshia tridentata voucher B23 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 787 Score = 89.7 bits (45), Expect = 9e-15 Identities = 103/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 128 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 187 ||||||||| | ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 391 gctccgttgtagaattcagacctaaccattaatcgagaagtggtgggaacgacagaacct 450 Query: 188 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 246 ||| | |||| |||| ||||||||| ||||||||| |||||||||| |||||||||| Sbjct: 451 gtgaatgcataagattctattgaaaacgaatcctaatgattcattgggtaggatggcgga 510 Query: 247 a 247 | Sbjct: 511 a 511 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 302 gaaagagtaaatattcgcccgcgaa 326 ||||||||||||||||||||||||| Sbjct: 578 gaaagagtaaatattcgcccgcgaa 602
>gb|AY151625.1| Stylapterus ericoides subsp. pallidus rpl16 gene, intron; chloroplast gene for chloroplast product Length = 956 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/128 (84%), Gaps = 2/128 (1%) Strand = Plus / Plus Query: 128 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 187 ||||||||| | ||||| ||||||||||| | ||||| | |||||||||| |||||| Sbjct: 379 gctccgttgtagaattcaaacctaaccattaattgagaaacgatgggaacgacggaacct 438 Query: 188 atgattccataggattttattgaaaa--gaatcctaacacttcattgggtgggatggcgg 245 ||| | |||||||||| |||||||| ||||||||| | |||||||||||||||||||| Sbjct: 439 gtgaatacataggatttcattgaaaaacgaatcctaataattcattgggtgggatggcgg 498 Query: 246 aacaaacc 253 ||| |||| Sbjct: 499 aacgaacc 506 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 gaaagagtaaatattcgcccgcgaa 326 ||||||| ||||||||||||||||| Sbjct: 567 gaaagaggaaatattcgcccgcgaa 591
>gb|AY151624.1| Stylapterus ericifolius rpl16 gene, intron; chloroplast gene for chloroplast product Length = 956 Score = 89.7 bits (45), Expect = 9e-15 Identities = 108/128 (84%), Gaps = 2/128 (1%) Strand = Plus / Plus Query: 128 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 187 ||||||||| | ||||| ||||||||||| | ||||| | |||||||||| |||||| Sbjct: 379 gctccgttgtagaattcaaacctaaccattaattgagaaacgatgggaacgacggaacct 438 Query: 188 atgattccataggattttattgaaaa--gaatcctaacacttcattgggtgggatggcgg 245 ||| | |||||||||| |||||||| ||||||||| | |||||||||||||||||||| Sbjct: 439 gtgaatacataggatttcattgaaaaatgaatcctaataattcattgggtgggatggcgg 498 Query: 246 aacaaacc 253 ||| |||| Sbjct: 499 aacgaacc 506 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 gaaagagtaaatattcgcccgcgaa 326 ||||||| ||||||||||||||||| Sbjct: 567 gaaagaggaaatattcgcccgcgaa 591 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,826,358 Number of Sequences: 3902068 Number of extensions: 8826358 Number of successful extensions: 220844 Number of sequences better than 10.0: 2870 Number of HSP's better than 10.0 without gapping: 2739 Number of HSP's successfully gapped in prelim test: 135 Number of HSP's that attempted gapping in prelim test: 211434 Number of HSP's gapped (non-prelim): 8229 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
