ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags26d18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071308.1| Oryza sativa (japonica cultivar-group) cDNA clon... 426 e-116
2gb|BT019159.1| Zea mays clone Contig823.F mRNA sequence 337 3e-89
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 240 5e-60
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 240 5e-60
5gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome... 240 5e-60
6gb|AC122165.37| Medicago truncatula clone mth2-32m22, complete s... 109 1e-20
7ref|NM_104465.2| Arabidopsis thaliana catalytic/ lyase AT1G55880... 50 0.009
8ref|NM_202309.1| Arabidopsis thaliana catalytic/ lyase AT1G55880... 50 0.009
9gb|BT012558.1| Arabidopsis thaliana At1g55880 gene, complete cds 50 0.009
10emb|BX815064.1|CNS0ACZB Arabidopsis thaliana Full-length cDNA Co... 50 0.009
11gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 44 0.55
12ref|XM_572428.1| Cryptococcus neoformans var. neoformans JEC21 c... 44 0.55
13emb|AL139093.11| Human DNA sequence from clone RP11-440J4 on chr... 44 0.55
14gb|AC104882.30| Mus musculus chromosome 8, clone RP23-401L9, com... 42 2.2
15gb|AC079218.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 2.2
16emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chr... 42 2.2
17gb|AC166172.1| Mus musculus BAC clone RP23-106N22 from chromosom... 42 2.2
18emb|BX324132.10| Zebrafish DNA sequence from clone DKEY-176G4 in... 42 2.2
19emb|CR354582.14| Zebrafish DNA sequence from clone CH211-215B24 ... 42 2.2
20dbj|AK147495.1| Mus musculus 14 days pregnant adult female place... 42 2.2
21gb|AC155923.2| Mus musculus BAC clone RP24-488E11 from chromosom... 42 2.2
22dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome 42 2.2
23gb|AC140672.5| Mus musculus BAC clone RP24-208P4 from chromosome... 42 2.2
24gb|AC163331.8| Mus musculus chromosome 5, clone RP23-50G20, comp... 40 8.6
25gb|AC138026.4| Mus musculus BAC clone RP24-501L6 from chromosome... 40 8.6
26emb|AJ853849.1| Sus scrofa PRSS11 gene (partial), DMBT1 gene, AW... 40 8.6
27gb|AC092729.3| Canis familiaris clone RP81-60B6, complete sequence 40 8.6
28emb|AL590731.12| Human DNA sequence from clone RP11-149M6 on chr... 40 8.6
29emb|AL512444.20| Human DNA sequence from clone RP11-69E9 on chro... 40 8.6
30emb|AL390316.6| Human DNA sequence from clone RP11-551A13 on chr... 40 8.6
31gb|AC107082.3| Homo sapiens BAC clone RP11-807A15 from 2, comple... 40 8.6
32gb|AC106047.5| Homo sapiens BAC clone RP11-293A21 from 4, comple... 40 8.6
33gb|AC157089.5| Mus musculus 10 BAC RP24-339G14 (Roswell Park Can... 40 8.6
34gb|AC096663.1| Homo sapiens BAC clone RP11-103L19 from 2, comple... 40 8.6
35gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, c... 40 8.6
36gb|AC002304.3|AC002304 Genomic sequence for Arabidopsis thaliana... 40 8.6
37dbj|BS000087.1| Pan troglodytes chromosome 22 clone:RP43-110O22,... 40 8.6
38gb|AC154123.9| Mus musculus chromosome 5, clone RP24-324D14, com... 40 8.6
39gb|AC138398.9| Mus musculus chromosome 5, clone RP23-309P20, com... 40 8.6
40gb|AF130534.1|AF130534 Felis catus clone Fca129 microsatellite s... 40 8.6
41emb|CR847947.14| Zebrafish DNA sequence from clone DKEY-56M16 in... 40 8.6
42emb|AL133222.2|HS69P17 Homo sapiens chromosome 21 BAC RPCIP704P1... 40 8.6
43dbj|AP004248.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.6 
>dbj|AK071308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083K22, full
            insert sequence
          Length = 1746

 Score =  426 bits (215), Expect = e-116
 Identities = 326/363 (89%)
 Strand = Plus / Plus

                                                                        
Query: 271  tctgattcgaagggaggtttctttgctgaccagtttgaaaatatggcaaactatcgagcg 330
            |||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||| 
Sbjct: 738  tctgattcaaagggaggtttctttgctgaccaatttgagaatatggcaaactaccgagcc 797

                                                                        
Query: 331  cattacgaatggactggtcctgagatatggaagcaaactaaagggactgtccacgccttt 390
            ||||| |||||||||||||||||||||||| | |||| |||||||||  | || ||||||
Sbjct: 798  cattatgaatggactggtcctgagatatggcaacaaagtaaagggacactgcatgccttt 857

                                                                        
Query: 391  gttgctgcagctggtactggcggtacgattgctggagtttcacgatatcttaaggaaatg 450
            |||||||||||||| ||||| || || ||||||||||| ||||| ||||||||||||| |
Sbjct: 858  gttgctgcagctggcactggtggcacaattgctggagtctcacggtatcttaaggaaaag 917

                                                                        
Query: 451  aacagaaatgtccgatgctttttaatggatccacctggatctggtctgtttaataaggta 510
            |||| |||  ||  |||||| |||||||| |||||||||||||||||||| |||||||| 
Sbjct: 918  aacacaaacatcaaatgcttcttaatggacccacctggatctggtctgttcaataaggtt 977

                                                                        
Query: 511  actagaggggttatgtacacaaaagaggaggctgagggcaaaaggctgaaaaaccctttt 570
            ||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 978  actagaggggtgatgtacacaaaagaggaagctgagggcaaaaggctgaagaatcctttt 1037

                                                                        
Query: 571  gacactattactgaaggaattggaatcaacagggtcacagcaaattttatgatggcagaa 630
            ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||| |||
Sbjct: 1038 gacactattactgaaggaattggaatcaacagggttacaaaaaattttatgatggcggaa 1097

               
Query: 631  ctg 633
            |||
Sbjct: 1098 ctg 1100



 Score =  117 bits (59), Expect = 5e-23
 Identities = 106/122 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   gctgccgttgagaagtctcaaattattgaagcgcttggagctactgtggaacgagtgcgt 60
           |||||| |||||||||||||||| || || ||||| || ||||| || ||||||||||| 
Sbjct: 438 gctgccattgagaagtctcaaataatcgaggcgctcggggctacagttgaacgagtgcgc 497

                                                                       
Query: 61  cctgtttcaatnactcacagagaccattttgtcaatattgcaagaagaagggcattggaa 120
           ||||||||||| || || || |||||||||||||||||||| ||||||||||| || |||
Sbjct: 498 cctgtttcaattacacatagggaccattttgtcaatattgctagaagaagggctttagaa 557

             
Query: 121 gc 122
           ||
Sbjct: 558 gc 559
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>gb|BT019159.1| Zea mays clone Contig823.F mRNA sequence
          Length = 948

 Score =  337 bits (170), Expect = 3e-89
 Identities = 317/366 (86%)
 Strand = Plus / Plus

                                                                       
Query: 268 aattctgattcgaagggaggtttctttgctgaccagtttgaaaatatggcaaactatcga 327
           ||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||||||
Sbjct: 15  aattctgattcaaagggaggtttttttgctgaccagtttgagaatttggcaaactatcga 74

                                                                       
Query: 328 gcgcattacgaatggactggtcctgagatatggaagcaaactaaagggactgtccacgcc 387
           || ||||| ||||| |||||||||||||| ||||| || |||||||| |   | || |||
Sbjct: 75  gcacattatgaatgtactggtcctgagatttggaaacagactaaaggtaacctgcatgcc 134

                                                                       
Query: 388 tttgttgctgcagctggtactggcggtacgattgctggagtttcacgatatcttaaggaa 447
           || ||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 135 ttcgttgcagcagctggtactggcggtacaattgccggagtctcacgatatcttaaggaa 194

                                                                       
Query: 448 atgaacagaaatgtccgatgctttttaatggatccacctggatctggtctgtttaataag 507
           | |||||| |   ||  ||| ||||||||||| || ||||||||||||||||| ||||||
Sbjct: 195 aagaacaggagcatcaaatgttttttaatggaccctcctggatctggtctgttcaataag 254

                                                                       
Query: 508 gtaactagaggggttatgtacacaaaagaggaggctgagggcaaaaggctgaaaaaccct 567
           || || |||||||| |||||||||||||||||||| ||||| ||  |||| || ||||||
Sbjct: 255 gttaccagaggggtgatgtacacaaaagaggaggccgaggggaagcggcttaagaaccct 314

                                                                       
Query: 568 tttgacactattactgaaggaattggaatcaacagggtcacagcaaattttatgatggca 627
           ||||| ||||||||||||||||| |||||||| ||||||||   |||||| |||||||| 
Sbjct: 315 tttgatactattactgaaggaataggaatcaatagggtcactaaaaatttcatgatggcg 374

                 
Query: 628 gaactg 633
           ||||||
Sbjct: 375 gaactg 380
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  240 bits (121), Expect = 5e-60
 Identities = 157/169 (92%)
 Strand = Plus / Plus

                                                                           
Query: 465     atgctttttaatggatccacctggatctggtctgtttaataaggtaactagaggggttat 524
               |||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 6056194 atgcttcttaatggacccacctggatctggtctgttcaataaggttactagaggggtgat 6056253

                                                                           
Query: 525     gtacacaaaagaggaggctgagggcaaaaggctgaaaaacccttttgacactattactga 584
               ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 6056254 gtacacaaaagaggaagctgagggcaaaaggctgaagaatccttttgacactattactga 6056313

                                                                
Query: 585     aggaattggaatcaacagggtcacagcaaattttatgatggcagaactg 633
               ||||||||||||||||||||| |||  ||||||||||||||| ||||||
Sbjct: 6056314 aggaattggaatcaacagggttacaaaaaattttatgatggcggaactg 6056362



 Score =  196 bits (99), Expect = 6e-47
 Identities = 156/175 (89%)
 Strand = Plus / Plus

                                                                           
Query: 271     tctgattcgaagggaggtttctttgctgaccagtttgaaaatatggcaaactatcgagcg 330
               |||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||| 
Sbjct: 6055914 tctgattcaaagggaggtttctttgctgaccaatttgagaatatggcaaactaccgagcc 6055973

                                                                           
Query: 331     cattacgaatggactggtcctgagatatggaagcaaactaaagggactgtccacgccttt 390
               ||||| |||||||||||||||||||||||| | |||| |||||||||  | || ||||||
Sbjct: 6055974 cattatgaatggactggtcctgagatatggcaacaaagtaaagggacactgcatgccttt 6056033

                                                                      
Query: 391     gttgctgcagctggtactggcggtacgattgctggagtttcacgatatcttaagg 445
               |||||||||||||| ||||| || || ||||||||||| ||||| ||||||||||
Sbjct: 6056034 gttgctgcagctggcactggtggcacaattgctggagtctcacggtatcttaagg 6056088



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 94/109 (86%)
 Strand = Plus / Plus

                                                                           
Query: 14      agtctcaaattattgaagcgcttggagctactgtggaacgagtgcgtcctgtttcaatna 73
               |||||||||| || || ||||| || ||||| || ||||||||||| ||||||||||| |
Sbjct: 6055627 agtctcaaataatcgaggcgctcggggctacagttgaacgagtgcgccctgtttcaatta 6055686

                                                                
Query: 74      ctcacagagaccattttgtcaatattgcaagaagaagggcattggaagc 122
               | || || |||||||||||||||||||| ||||||||||| || |||||
Sbjct: 6055687 cacatagggaccattttgtcaatattgctagaagaagggctttagaagc 6055735
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  240 bits (121), Expect = 5e-60
 Identities = 157/169 (92%)
 Strand = Plus / Plus

                                                                           
Query: 465     atgctttttaatggatccacctggatctggtctgtttaataaggtaactagaggggttat 524
               |||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 6055407 atgcttcttaatggacccacctggatctggtctgttcaataaggttactagaggggtgat 6055466

                                                                           
Query: 525     gtacacaaaagaggaggctgagggcaaaaggctgaaaaacccttttgacactattactga 584
               ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 6055467 gtacacaaaagaggaagctgagggcaaaaggctgaagaatccttttgacactattactga 6055526

                                                                
Query: 585     aggaattggaatcaacagggtcacagcaaattttatgatggcagaactg 633
               ||||||||||||||||||||| |||  ||||||||||||||| ||||||
Sbjct: 6055527 aggaattggaatcaacagggttacaaaaaattttatgatggcggaactg 6055575



 Score =  196 bits (99), Expect = 6e-47
 Identities = 156/175 (89%)
 Strand = Plus / Plus

                                                                           
Query: 271     tctgattcgaagggaggtttctttgctgaccagtttgaaaatatggcaaactatcgagcg 330
               |||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||| 
Sbjct: 6055127 tctgattcaaagggaggtttctttgctgaccaatttgagaatatggcaaactaccgagcc 6055186

                                                                           
Query: 331     cattacgaatggactggtcctgagatatggaagcaaactaaagggactgtccacgccttt 390
               ||||| |||||||||||||||||||||||| | |||| |||||||||  | || ||||||
Sbjct: 6055187 cattatgaatggactggtcctgagatatggcaacaaagtaaagggacactgcatgccttt 6055246

                                                                      
Query: 391     gttgctgcagctggtactggcggtacgattgctggagtttcacgatatcttaagg 445
               |||||||||||||| ||||| || || ||||||||||| ||||| ||||||||||
Sbjct: 6055247 gttgctgcagctggcactggtggcacaattgctggagtctcacggtatcttaagg 6055301



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 94/109 (86%)
 Strand = Plus / Plus

                                                                           
Query: 14      agtctcaaattattgaagcgcttggagctactgtggaacgagtgcgtcctgtttcaatna 73
               |||||||||| || || ||||| || ||||| || ||||||||||| ||||||||||| |
Sbjct: 6054840 agtctcaaataatcgaggcgctcggggctacagttgaacgagtgcgccctgtttcaatta 6054899

                                                                
Query: 74      ctcacagagaccattttgtcaatattgcaagaagaagggcattggaagc 122
               | || || |||||||||||||||||||| ||||||||||| || |||||
Sbjct: 6054900 cacatagggaccattttgtcaatattgctagaagaagggctttagaagc 6054948
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>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090D11, complete sequence
          Length = 174865

 Score =  240 bits (121), Expect = 5e-60
 Identities = 157/169 (92%)
 Strand = Plus / Plus

                                                                         
Query: 465   atgctttttaatggatccacctggatctggtctgtttaataaggtaactagaggggttat 524
             |||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 49670 atgcttcttaatggacccacctggatctggtctgttcaataaggttactagaggggtgat 49729

                                                                         
Query: 525   gtacacaaaagaggaggctgagggcaaaaggctgaaaaacccttttgacactattactga 584
             ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 49730 gtacacaaaagaggaagctgagggcaaaaggctgaagaatccttttgacactattactga 49789

                                                              
Query: 585   aggaattggaatcaacagggtcacagcaaattttatgatggcagaactg 633
             ||||||||||||||||||||| |||  ||||||||||||||| ||||||
Sbjct: 49790 aggaattggaatcaacagggttacaaaaaattttatgatggcggaactg 49838



 Score =  196 bits (99), Expect = 6e-47
 Identities = 156/175 (89%)
 Strand = Plus / Plus

                                                                         
Query: 271   tctgattcgaagggaggtttctttgctgaccagtttgaaaatatggcaaactatcgagcg 330
             |||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||| 
Sbjct: 49390 tctgattcaaagggaggtttctttgctgaccaatttgagaatatggcaaactaccgagcc 49449

                                                                         
Query: 331   cattacgaatggactggtcctgagatatggaagcaaactaaagggactgtccacgccttt 390
             ||||| |||||||||||||||||||||||| | |||| |||||||||  | || ||||||
Sbjct: 49450 cattatgaatggactggtcctgagatatggcaacaaagtaaagggacactgcatgccttt 49509

                                                                    
Query: 391   gttgctgcagctggtactggcggtacgattgctggagtttcacgatatcttaagg 445
             |||||||||||||| ||||| || || ||||||||||| ||||| ||||||||||
Sbjct: 49510 gttgctgcagctggcactggtggcacaattgctggagtctcacggtatcttaagg 49564



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 94/109 (86%)
 Strand = Plus / Plus

                                                                         
Query: 14    agtctcaaattattgaagcgcttggagctactgtggaacgagtgcgtcctgtttcaatna 73
             |||||||||| || || ||||| || ||||| || ||||||||||| ||||||||||| |
Sbjct: 49103 agtctcaaataatcgaggcgctcggggctacagttgaacgagtgcgccctgtttcaatta 49162

                                                              
Query: 74    ctcacagagaccattttgtcaatattgcaagaagaagggcattggaagc 122
             | || || |||||||||||||||||||| ||||||||||| || |||||
Sbjct: 49163 cacatagggaccattttgtcaatattgctagaagaagggctttagaagc 49211
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>gb|AC122165.37| Medicago truncatula clone mth2-32m22, complete sequence
          Length = 148586

 Score =  109 bits (55), Expect = 1e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                         
Query: 14    agtctcaaattattgaagcgcttggagctactgtggaacgagtgcgtcctgtttcaatna 73
             ||||||||||||||||||| |||||||| ||||| ||| |||| || || || ||||| |
Sbjct: 67675 agtctcaaattattgaagcacttggagcaactgttgaaagagtacgaccagtgtcaatca 67734

                                                       
Query: 74    ctcacagagaccattttgtcaatattgcaagaagaagggcat 115
             | |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 67735 cacacaaagaccattttgtcaatattgcaagaagacgggcat 67776



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 90/109 (82%)
 Strand = Plus / Plus

                                                                         
Query: 497   tgtttaataaggtaactagaggggttatgtacacaaaagaggaggctgagggcaaaaggc 556
             |||||||||||||||  || ||||| |||||||| ||||||||||| || ||   ||| |
Sbjct: 68200 tgtttaataaggtaatgaggggggtaatgtacaccaaagaggaggcagaaggacgaagac 68259

                                                              
Query: 557   tgaaaaacccttttgacactattactgaaggaattggaatcaacagggt 605
             | || || || ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 68260 ttaagaatccatttgacactataacagaaggaatcggaattaacagggt 68308
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>ref|NM_104465.2| Arabidopsis thaliana catalytic/ lyase AT1G55880 transcript variant
           AT1G55880.1 mRNA, complete cds
          Length = 1648

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 8   ttgagaagtctcaaattattgaagcgcttggagctactgtggaacgagtgcgtcctgttt 67
           |||| ||||||||||| |||||||| ||||||||| |||| ||  ||||| | || || |
Sbjct: 435 ttgaaaagtctcaaataattgaagcccttggagcttctgttgagagagtgaggccagtgt 494

                       
Query: 68  caatnactcaca 79
           |||| |||||||
Sbjct: 495 caataactcaca 506



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 478 gatccacctggatctggtctgtttaataaggtaactagaggggttatgtacacaaaagag 537
           ||||| ||||||||||||||||  ||||| |||||  | || || |||||||||| ||| 
Sbjct: 866 gatcctcctggatctggtctgtacaataaagtaacacggggagtgatgtacacaagagaa 925

                   
Query: 538 gaggctga 545
           || |||||
Sbjct: 926 gaagctga 933
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>ref|NM_202309.1| Arabidopsis thaliana catalytic/ lyase AT1G55880 transcript variant
           AT1G55880.2 mRNA, complete cds
          Length = 1756

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 8   ttgagaagtctcaaattattgaagcgcttggagctactgtggaacgagtgcgtcctgttt 67
           |||| ||||||||||| |||||||| ||||||||| |||| ||  ||||| | || || |
Sbjct: 435 ttgaaaagtctcaaataattgaagcccttggagcttctgttgagagagtgaggccagtgt 494

                       
Query: 68  caatnactcaca 79
           |||| |||||||
Sbjct: 495 caataactcaca 506



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 478 gatccacctggatctggtctgtttaataaggtaactagaggggttatgtacacaaaagag 537
           ||||| ||||||||||||||||  ||||| |||||  | || || |||||||||| ||| 
Sbjct: 866 gatcctcctggatctggtctgtacaataaagtaacacggggagtgatgtacacaagagaa 925

                   
Query: 538 gaggctga 545
           || |||||
Sbjct: 926 gaagctga 933
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>gb|BT012558.1| Arabidopsis thaliana At1g55880 gene, complete cds
          Length = 1266

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 8   ttgagaagtctcaaattattgaagcgcttggagctactgtggaacgagtgcgtcctgttt 67
           |||| ||||||||||| |||||||| ||||||||| |||| ||  ||||| | || || |
Sbjct: 410 ttgaaaagtctcaaataattgaagcccttggagcttctgttgagagagtgaggccagtgt 469

                       
Query: 68  caatnactcaca 79
           |||| |||||||
Sbjct: 470 caataactcaca 481



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 478 gatccacctggatctggtctgtttaataaggtaactagaggggttatgtacacaaaagag 537
           ||||| ||||||||||||||||  ||||| |||||  | || || |||||||||| ||| 
Sbjct: 841 gatcctcctggatctggtctgtacaataaagtaacacggggagtgatgtacacaagagaa 900

                   
Query: 538 gaggctga 545
           || |||||
Sbjct: 901 gaagctga 908
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>emb|BX815064.1|CNS0ACZB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS2ZF04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1628

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 8   ttgagaagtctcaaattattgaagcgcttggagctactgtggaacgagtgcgtcctgttt 67
           |||| ||||||||||| |||||||| ||||||||| |||| ||  ||||| | || || |
Sbjct: 435 ttgaaaagtctcaaatgattgaagcccttggagcttctgttgagagagtgaggccagtgt 494

                       
Query: 68  caatnactcaca 79
           |||| |||||||
Sbjct: 495 caataactcaca 506
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>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
              sequence
          Length = 1194300

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 286    ggtttctttgctgaccagtttgaaaa 311
              ||||||||||| ||||||||||||||
Sbjct: 415323 ggtttctttgccgaccagtttgaaaa 415298
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>ref|XM_572428.1| Cryptococcus neoformans var. neoformans JEC21 cysteine synthase
           (CNH02520) partial mRNA
          Length = 1556

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 286 ggtttctttgctgaccagtttgaaaa 311
           ||||||||||| ||||||||||||||
Sbjct: 782 ggtttctttgccgaccagtttgaaaa 807
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>emb|AL139093.11| Human DNA sequence from clone RP11-440J4 on chromosome 6 Contains a
             serine palmitoyltransferase long chain base subunit 1
             (SPTLC1) pseudogene, complete sequence
          Length = 131995

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 350   ctgagatatggaagcaaactaa 371
             ||||||||||||||||||||||
Sbjct: 18670 ctgagatatggaagcaaactaa 18649
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>gb|AC104882.30| Mus musculus chromosome 8, clone RP23-401L9, complete sequence
          Length = 209525

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 368   ctaaagggactgtccacgcct 388
             |||||||||||||||||||||
Sbjct: 10173 ctaaagggactgtccacgcct 10153
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>gb|AC079218.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-382G13, complete
             sequence
          Length = 142667

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 434   gatatcttaaggaaatgaaca 454
             |||||||||||||||||||||
Sbjct: 69900 gatatcttaaggaaatgaaca 69880
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>emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chromosome 6, complete
              sequence
          Length = 159845

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 499    tttaataaggtaactagaggg 519
              |||||||||||||||||||||
Sbjct: 141847 tttaataaggtaactagaggg 141827
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>gb|AC166172.1| Mus musculus BAC clone RP23-106N22 from chromosome 17, complete sequence
          Length = 213656

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 536    aggaggctgagggcaaaaggctgaa 560
              |||||||||||||||||||| ||||
Sbjct: 151239 aggaggctgagggcaaaaggttgaa 151215
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>emb|BX324132.10| Zebrafish DNA sequence from clone DKEY-176G4 in linkage group 8, complete
              sequence
          Length = 266430

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 230    ccagttctgaagtgcctgaca 250
              |||||||||||||||||||||
Sbjct: 162140 ccagttctgaagtgcctgaca 162160
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>emb|CR354582.14| Zebrafish DNA sequence from clone CH211-215B24 in linkage group 8,
              complete sequence
          Length = 227074

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 230    ccagttctgaagtgcctgaca 250
              |||||||||||||||||||||
Sbjct: 190309 ccagttctgaagtgcctgaca 190289
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>dbj|AK147495.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN
            full-length enriched library, clone:M5C1054I11
            product:membrane-bound transcription factor protease,
            site 1, full insert sequence
          Length = 6623

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 368  ctaaagggactgtccacgcct 388
            |||||||||||||||||||||
Sbjct: 4137 ctaaagggactgtccacgcct 4157
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>gb|AC155923.2| Mus musculus BAC clone RP24-488E11 from chromosome 9, complete sequence
          Length = 134932

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 300   ccagtttgaaaatatggcaaa 320
             |||||||||||||||||||||
Sbjct: 30488 ccagtttgaaaatatggcaaa 30468
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>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 384     cgcctttgttgctgcagctggtactggcggtacgatt 420
               |||||||||||||||  ||||||| || |||||||||
Sbjct: 3392342 cgcctttgttgctgcctctggtacgggtggtacgatt 3392378
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>gb|AC140672.5| Mus musculus BAC clone RP24-208P4 from chromosome 8, complete sequence
          Length = 212819

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 368    ctaaagggactgtccacgcct 388
              |||||||||||||||||||||
Sbjct: 186853 ctaaagggactgtccacgcct 186833
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>gb|AC163331.8| Mus musculus chromosome 5, clone RP23-50G20, complete sequence
          Length = 257982

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 438    tcttaaggaaatgaacagaa 457
              ||||||||||||||||||||
Sbjct: 256602 tcttaaggaaatgaacagaa 256621
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>gb|AC138026.4| Mus musculus BAC clone RP24-501L6 from chromosome 10, complete sequence
          Length = 183477

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    aagaagggcattggaagcca 124
              ||||||||||||||||||||
Sbjct: 144145 aagaagggcattggaagcca 144164
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>emb|AJ853849.1| Sus scrofa PRSS11 gene (partial), DMBT1 gene, AWN gene, AQN-1 gene,
              PSP-II gene, PSP-I gene, AQN-3 gene and C10ORF120 gene
          Length = 270148

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    gagatatggaagcaaactaa 371
              ||||||||||||||||||||
Sbjct: 172154 gagatatggaagcaaactaa 172173
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>gb|AC092729.3| Canis familiaris clone RP81-60B6, complete sequence
          Length = 165116

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   ggactggtcctgagatatgg 360
             ||||||||||||||||||||
Sbjct: 72753 ggactggtcctgagatatgg 72772
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>emb|AL590731.12| Human DNA sequence from clone RP11-149M6 on chromosome 6, complete
              sequence
          Length = 149389

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 356    tatggaagcaaactaaagggactg 379
              |||||||| |||||||||||||||
Sbjct: 135867 tatggaagaaaactaaagggactg 135890
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>emb|AL512444.20| Human DNA sequence from clone RP11-69E9 on chromosome 1 Contains part of
              the EPHB2 gene for EphB2 and a novel gene, complete
              sequence
          Length = 126589

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 536    aggaggctgagggcaaaaggctga 559
              ||||||||||||||| ||||||||
Sbjct: 108326 aggaggctgagggcagaaggctga 108303
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>emb|AL390316.6| Human DNA sequence from clone RP11-551A13 on chromosome 6 Contains a
             ribosomal protein S6 (RPS6) pseudogene, complete sequence
          Length = 106341

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   caaactaaagggactgtcca 383
             ||||||||||||||||||||
Sbjct: 59836 caaactaaagggactgtcca 59817
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>gb|AC107082.3| Homo sapiens BAC clone RP11-807A15 from 2, complete sequence
          Length = 112944

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    tcaatattgcaagaagaagg 111
             ||||||||||||||||||||
Sbjct: 41615 tcaatattgcaagaagaagg 41596
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>gb|AC106047.5| Homo sapiens BAC clone RP11-293A21 from 4, complete sequence
          Length = 175918

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   agatatggaagcaaactaaa 372
             ||||||||||||||||||||
Sbjct: 75234 agatatggaagcaaactaaa 75215
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>gb|AC157089.5| Mus musculus 10 BAC RP24-339G14 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 160723

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   aagggaggtttctttgctga 299
             ||||||||||||||||||||
Sbjct: 43485 aagggaggtttctttgctga 43466
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>gb|AC096663.1| Homo sapiens BAC clone RP11-103L19 from 2, complete sequence
          Length = 152416

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 601   agggtcacagcaaattttat 620
             ||||||||||||||||||||
Sbjct: 87097 agggtcacagcaaattttat 87116
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>gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, complete sequence
          Length = 174914

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 533    aagaggaggctgagggcaaa 552
              ||||||||||||||||||||
Sbjct: 111011 aagaggaggctgagggcaaa 110992
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>gb|AC002304.3|AC002304 Genomic sequence for Arabidopsis thaliana BAC F14J16 from chromosome I,
             complete sequence
          Length = 106320

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                         
Query: 478   gatccacctggatctggtctgtttaataaggtaactagaggggttatgtacacaaaagag 537
             ||||| ||||||||||||||||  ||||| |||||  | || || |||||||||| ||| 
Sbjct: 48417 gatcctcctggatctggtctgtacaataaagtaacacggggagtgatgtacacaagagaa 48358

                     
Query: 538   gaggctga 545
             || |||||
Sbjct: 48357 gaagctga 48350
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>dbj|BS000087.1| Pan troglodytes chromosome 22 clone:RP43-110O22, map 22, complete
             sequences
          Length = 156630

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   atggaagcaaactaaaggga 376
             ||||||||||||||||||||
Sbjct: 30982 atggaagcaaactaaaggga 31001
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>gb|AC154123.9| Mus musculus chromosome 5, clone RP24-324D14, complete sequence
          Length = 175751

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 438  tcttaaggaaatgaacagaa 457
            ||||||||||||||||||||
Sbjct: 7802 tcttaaggaaatgaacagaa 7821
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>gb|AC138398.9| Mus musculus chromosome 5, clone RP23-309P20, complete sequence
          Length = 190846

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 438  tcttaaggaaatgaacagaa 457
            ||||||||||||||||||||
Sbjct: 7637 tcttaaggaaatgaacagaa 7618
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>gb|AF130534.1|AF130534 Felis catus clone Fca129 microsatellite sequence
          Length = 270

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 agatatggaagcaaactaaa 372
           ||||||||||||||||||||
Sbjct: 165 agatatggaagcaaactaaa 146
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>emb|CR847947.14| Zebrafish DNA sequence from clone DKEY-56M16 in linkage group 7, complete
              sequence
          Length = 205682

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 532    aaagaggaggctgagggcaa 551
              ||||||||||||||||||||
Sbjct: 180314 aaagaggaggctgagggcaa 180333
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>emb|AL133222.2|HS69P17 Homo sapiens chromosome 21 BAC RPCIP704P1769, complete sequence
          Length = 102619

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   atggaagcaaactaaaggga 376
             ||||||||||||||||||||
Sbjct: 17251 atggaagcaaactaaaggga 17232
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>dbj|AP004248.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-709M17, complete
             sequence
          Length = 191071

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 246   tgacactggcaaatgttaccctaa 269
             |||||||||||||| |||||||||
Sbjct: 66681 tgacactggcaaattttaccctaa 66658


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,795,550
Number of Sequences: 3902068
Number of extensions: 6795550
Number of successful extensions: 115088
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114889
Number of HSP's gapped (non-prelim): 196
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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