ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags26d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106682.1| Zea mays PCO080186 mRNA sequence 359 7e-96
2ref|NM_192690.1| Oryza sativa (japonica cultivar-group), predic... 303 3e-79
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
4dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
5ref|NM_101368.2| Arabidopsis thaliana unknown protein AT1G14990 ... 44 0.52
6gb|BT024571.1| Arabidopsis thaliana At1g14990 mRNA, complete cds 44 0.52
7dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 44 0.52
8dbj|AK118902.1| Arabidopsis thaliana At1g14990 mRNA for unknown ... 44 0.52
9gb|AE017221.1| Thermus thermophilus HB27, complete genome 44 0.52
10ref|XM_473805.1| Oryza sativa (japonica cultivar-group), predic... 42 2.0
11gb|AC123665.9| Mus musculus chromosome 14, clone RP23-226A4, com... 42 2.0
12emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 2.0
13emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4,... 42 2.0
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
16dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
17dbj|AK102588.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
18emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 2.0
19gb|AC156016.2| Mus musculus BAC clone RP24-320A12 from chromosom... 42 2.0
20gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 8.1
21gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 40 8.1
22ref|XM_478742.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
23ref|XM_478741.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
24gb|AF468296.1| Uncultured bacterium clone ARKIA-34 16S ribosomal... 40 8.1
25gb|DQ061922.1| Uncultured Russulaceae isolate IT7B-ECM clone 2 i... 40 8.1
26gb|DQ061920.1| Uncultured Russulaceae isolate IT7B-ECM clone 1 i... 40 8.1
27gb|DQ061919.1| Uncultured Russulaceae isolate IT7B-ECM clone 2 i... 40 8.1
28gb|DQ061893.1| Uncultured Russulaceae isolate IT7B-16 internal t... 40 8.1
29gb|DQ061892.1| Uncultured Russulaceae isolate IT7B-1 internal tr... 40 8.1
30emb|AL160166.10| Human DNA sequence from clone RP11-159N19 on ch... 40 8.1
31emb|AL049732.11|HSDA14C6 Human DNA sequence from clone RP6-14C6 ... 40 8.1
32gb|AC022535.6| Homo sapiens chromosome 10 clone RP11-34C15, comp... 40 8.1
33gb|AC091921.3| Homo sapiens chromosome 5 clone RP11-256N5, compl... 40 8.1
34ref|XM_691127.1| PREDICTED: Danio rerio similar to erythroblast ... 40 8.1
35ref|XM_682614.1| PREDICTED: Danio rerio similar to erythroblast ... 40 8.1
36gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.1
37dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
38dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
39dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
40dbj|AK107481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
41dbj|AK071983.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
42emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 8.1
43gb|AY876913.1| Human enterovirus Hangzhou13-02, complete genome 40 8.1
44gb|AY876912.1| Human enterovirus Ningbo3-02, complete genome 40 8.1
45gb|U10555.1|YSCH9780 Saccharomyces cerevisiae chromosome VIII co... 40 8.1
46dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete ge... 40 8.1 
>gb|AY106682.1| Zea mays PCO080186 mRNA sequence
          Length = 894

 Score =  359 bits (181), Expect = 7e-96
 Identities = 331/381 (86%)
 Strand = Plus / Plus

                                                                       
Query: 184 gtgagatggatattttgtatctgtgcaaggatgtcttaaagattcagaagtttaggcggc 243
           |||||||||||||  | |||| ||| ||||| || || ||||| ||||||||| ||||  
Sbjct: 301 gtgagatggatatcctttatcagtgtaaggaggttttgaagatccagaagtttcggcgta 360

                                                                       
Query: 244 tggcttcttatgctggattctattcattcactaccctcgttacctatgcttacacaagca 303
           |||  || |||||||||||||| |  |||||| ||||| |||| ||||||||||||||||
Sbjct: 361 tggtgtcatatgctggattctactgcttcacttccctcattacttatgcttacacaagca 420

                                                                       
Query: 304 atacgacaagggctggtatttcgagggctgatcagtattatgccgcctacccttctggta 363
           |||||||||||||||| || || |||||||| ||||||||| || |||||||| ||||||
Sbjct: 421 atacgacaagggctgggatgtcaagggctgaccagtattattcctcctaccctgctggta 480

                                                                       
Query: 364 ctgagttactcactgacactgcaaagctttacaaggccgcattgggtaattgttttgaaa 423
           ||||  |||| |||||||||||||||||||||||||| |||||||| |||||||||||| 
Sbjct: 481 ctgaactactaactgacactgcaaagctttacaaggctgcattgggcaattgttttgaag 540

                                                                       
Query: 424 tagacgactggggtccaatagaattctccatcatggcaaagcattttgaccggcaaggca 483
           |||| || ||||| |||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct: 541 tagatgaatggggcccaatagagttctccatcatggcaaaacattttgaccggcaaggga 600

                                                                       
Query: 484 aaccaccgtatgcttaccatgctcaatacatgtcacacgttctatcccatggacagctcg 543
           ||||||| ||||| ||||||||||||||  || ||||| |||| |||||||| |||||||
Sbjct: 601 aaccaccatatgcctaccatgctcaatatctggcacaccttctctcccatgggcagctcg 660

                                
Query: 544 atggaagtggttaactgcagg 564
           ||||||| |||||| ||||||
Sbjct: 661 atggaagcggttaaatgcagg 681
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>ref|NM_192690.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 369

 Score =  303 bits (153), Expect = 3e-79
 Identities = 312/365 (85%)
 Strand = Plus / Plus

                                                                       
Query: 189 atggatattttgtatctgtgcaaggatgtcttaaagattcagaagtttaggcggctggct 248
           |||||||||||||| |  || |||||  |||||||||| ||||||||  ||||   ||| 
Sbjct: 1   atggatattttgtaccaatgtaaggagttcttaaagatccagaagttccggcgtacggcg 60

                                                                       
Query: 249 tcttatgctggattctattcattcactaccctcgttacctatgcttacacaagcaatacg 308
           || |||||||||||||| |  |||||| ||||  | |||||||||||||| |||||||||
Sbjct: 61  tcctatgctggattctactgcttcactgccctaatgacctatgcttacacgagcaatacg 120

                                                                       
Query: 309 acaagggctggtatttcgagggctgatcagtattatgccgcctacccttctggtactgag 368
           ||||||||||| ||||| ||||  || || | ||||||| | || ||  ||||||| |||
Sbjct: 121 acaagggctggcatttctaggggcgaccaattttatgcctcatatcccgctggtacggag 180

                                                                       
Query: 369 ttactcactgacactgcaaagctttacaaggccgcattgggtaattgttttgaaatagac 428
            |||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 181 ctactaactgacactgcaaagctttacaaggctgcattaggtaattgtttcgaaatagat 240

                                                                       
Query: 429 gactggggtccaatagaattctccatcatggcaaagcattttgaccggcaaggcaaacca 488
           ||||||||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 241 gactggggtccaatagagttctctatcatggcaaaacattttgatcggcaaggcaaacca 300

                                                                       
Query: 489 ccgtatgcttaccatgctcaatacatgtcacacgttctatcccatggacagctcgatgga 548
           || ||||| || ||||| ||||||||| ||||| |||| |||||||| ||||||||||||
Sbjct: 301 ccatatgcgtatcatgcacaatacatggcacaccttctctcccatgggcagctcgatgga 360

                
Query: 549 agtgg 553
           |||||
Sbjct: 361 agtgg 365
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  147 bits (74), Expect = 5e-32
 Identities = 107/118 (90%)
 Strand = Plus / Plus

                                                                            
Query: 388      agctttacaaggccgcattgggtaattgttttgaaatagacgactggggtccaatagaat 447
                ||||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 23879812 agctttacaaggctgcattaggtaattgtttcgaaatagatgactggggtccaatagagt 23879871

                                                                          
Query: 448      tctccatcatggcaaagcattttgaccggcaaggcaaaccaccgtatgcttaccatgc 505
                |||| ||||||||||| |||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 23879872 tctctatcatggcaaaacattttgatcggcaaggcaaaccaccatatgcgtatcatgc 23879929



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                        
Query: 507      caatacatgtcacacgttctatcccatggacagctcgatggaagtggttaactgca 562
                ||||||||| ||||| |||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 23880094 caatacatggcacaccttctctcccatgggcagctcgatggaagtggataactgca 23880149



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                            
Query: 188      gatggatattttgtatctgtgcaaggatgtcttaaagattcagaagtttaggcggctggc 247
                ||||||||||||||| |  || |||||  |||||||||| ||||||||  ||||   |||
Sbjct: 23879380 gatggatattttgtaccaatgtaaggagttcttaaagatccagaagttccggcgtacggc 23879439

                                                                            
Query: 248      ttcttatgctggattctattcattcactaccctcgttacctatgcttacacaagcaatac 307
                 || |||||||||||||| |  |||||| ||||  | |||||||||||||| ||||||||
Sbjct: 23879440 gtcctatgctggattctactgcttcactgccctaatgacctatgcttacacgagcaatac 23879499

                 
Query: 308      g 308
                |
Sbjct: 23879500 g 23879500



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                            
Query: 308      gacaagggctggtatttcgagggctgatcagtattatgccgcctacccttctggtactga 367
                |||||||||||| ||||| ||||  || || | ||||||| | || ||  ||||||| ||
Sbjct: 23879592 gacaagggctggcatttctaggggcgaccaattttatgcctcatatcccgctggtacgga 23879651

                                      
Query: 368      gttactcactgacactgcaaag 389
                | |||| |||||||||||||||
Sbjct: 23879652 gctactaactgacactgcaaag 23879673
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>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0704D04
          Length = 147638

 Score =  147 bits (74), Expect = 5e-32
 Identities = 107/118 (90%)
 Strand = Plus / Plus

                                                                         
Query: 388   agctttacaaggccgcattgggtaattgttttgaaatagacgactggggtccaatagaat 447
             ||||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 26216 agctttacaaggctgcattaggtaattgtttcgaaatagatgactggggtccaatagagt 26275

                                                                       
Query: 448   tctccatcatggcaaagcattttgaccggcaaggcaaaccaccgtatgcttaccatgc 505
             |||| ||||||||||| |||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 26276 tctctatcatggcaaaacattttgatcggcaaggcaaaccaccatatgcgtatcatgc 26333



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 507   caatacatgtcacacgttctatcccatggacagctcgatggaagtggttaactgca 562
             ||||||||| ||||| |||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 26498 caatacatggcacaccttctctcccatgggcagctcgatggaagtggataactgca 26553



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                         
Query: 188   gatggatattttgtatctgtgcaaggatgtcttaaagattcagaagtttaggcggctggc 247
             ||||||||||||||| |  || |||||  |||||||||| ||||||||  ||||   |||
Sbjct: 25784 gatggatattttgtaccaatgtaaggagttcttaaagatccagaagttccggcgtacggc 25843

                                                                         
Query: 248   ttcttatgctggattctattcattcactaccctcgttacctatgcttacacaagcaatac 307
              || |||||||||||||| |  |||||| ||||  | |||||||||||||| ||||||||
Sbjct: 25844 gtcctatgctggattctactgcttcactgccctaatgacctatgcttacacgagcaatac 25903

              
Query: 308   g 308
             |
Sbjct: 25904 g 25904



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                         
Query: 308   gacaagggctggtatttcgagggctgatcagtattatgccgcctacccttctggtactga 367
             |||||||||||| ||||| ||||  || || | ||||||| | || ||  ||||||| ||
Sbjct: 25996 gacaagggctggcatttctaggggcgaccaattttatgcctcatatcccgctggtacgga 26055

                                   
Query: 368   gttactcactgacactgcaaag 389
             | |||| |||||||||||||||
Sbjct: 26056 gctactaactgacactgcaaag 26077
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>ref|NM_101368.2| Arabidopsis thaliana unknown protein AT1G14990 mRNA, complete cds
          Length = 663

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 444 gaattctccatcatggcaaagcattttgaccggcaaggcaaaccaccgtatgcttaccat 503
           ||||||| ||| ||||| ||||||||||| || || || ||| | || || | |||||| 
Sbjct: 348 gaattctgcataatggctaagcattttgatcgccagggaaaatctccatacgtttaccac 407

                                                             
Query: 504 gctcaatacatgtcacacgttctatcccatggacagctcgatggaagtgg 553
            | ||||||||| | ||| ||||||| || || || ||||||||||||||
Sbjct: 408 tcccaatacatggctcaccttctatctcaaggccaactcgatggaagtgg 457
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>gb|BT024571.1| Arabidopsis thaliana At1g14990 mRNA, complete cds
          Length = 369

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 444 gaattctccatcatggcaaagcattttgaccggcaaggcaaaccaccgtatgcttaccat 503
           ||||||| ||| ||||| ||||||||||| || || || ||| | || || | |||||| 
Sbjct: 256 gaattctgcataatggctaagcattttgatcgccagggaaaatctccatacgtttaccac 315

                                                             
Query: 504 gctcaatacatgtcacacgttctatcccatggacagctcgatggaagtgg 553
            | ||||||||| | ||| ||||||| || || || ||||||||||||||
Sbjct: 316 tcccaatacatggctcaccttctatctcaaggccaactcgatggaagtgg 365
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 117     cgccctcctcttcgccgtcttc 138
               ||||||||||||||||||||||
Sbjct: 1062191 cgccctcctcttcgccgtcttc 1062212
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>dbj|AK118902.1| Arabidopsis thaliana At1g14990 mRNA for unknown protein, complete
           cds, clone: RAFL21-24-M14
          Length = 663

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 88/110 (80%)
 Strand = Plus / Plus

                                                                       
Query: 444 gaattctccatcatggcaaagcattttgaccggcaaggcaaaccaccgtatgcttaccat 503
           ||||||| ||| ||||| ||||||||||| || || || ||| | || || | |||||| 
Sbjct: 348 gaattctgcataatggctaagcattttgatcgccagggaaaatctccatacgtttaccac 407

                                                             
Query: 504 gctcaatacatgtcacacgttctatcccatggacagctcgatggaagtgg 553
            | ||||||||| | ||| ||||||| || || || ||||||||||||||
Sbjct: 408 tcccaatacatggctcaccttctatctcaaggccaactcgatggaagtgg 457
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 117    cgccctcctcttcgccgtcttc 138
              ||||||||||||||||||||||
Sbjct: 735169 cgccctcctcttcgccgtcttc 735190
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>ref|XM_473805.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1719

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 117 cgccctcctcttcgccgtcttcatcgccgccac 149
           |||||||||||||  ||||||| ||||||||||
Sbjct: 90  cgccctcctcttcttcgtcttcgtcgccgccac 122
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>gb|AC123665.9| Mus musculus chromosome 14, clone RP23-226A4, complete sequence
          Length = 241576

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   ctgggcgaaagcagcaagctc 105
            |||||||||||||||||||||
Sbjct: 4587 ctgggcgaaagcagcaagctc 4607
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 261    ttctattcattcactaccctc 281
              |||||||||||||||||||||
Sbjct: 381338 ttctattcattcactaccctc 381318
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>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09,
             complete sequence
          Length = 152732

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 117   cgccctcctcttcgccgtcttcatcgccgccac 149
             |||||||||||||  ||||||| ||||||||||
Sbjct: 65847 cgccctcctcttcttcgtcttcgtcgccgccac 65815
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 117      cgccctcctcttcgccgtcttcatcgccgccac 149
                |||||||||||||  ||||||| ||||||||||
Sbjct: 30662116 cgccctcctcttcttcgtcttcgtcgccgccac 30662084
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 116     ccgccctcctcttcgccgtct 136
               |||||||||||||||||||||
Sbjct: 9892248 ccgccctcctcttcgccgtct 9892228
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>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0521F09
          Length = 164823

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   ccgccctcctcttcgccgtct 136
             |||||||||||||||||||||
Sbjct: 73210 ccgccctcctcttcgccgtct 73190
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>dbj|AK102588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098F09, full
           insert sequence
          Length = 2276

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 117 cgccctcctcttcgccgtcttcatcgccgccac 149
           |||||||||||||  ||||||| ||||||||||
Sbjct: 243 cgccctcctcttcttcgtcttcgtcgccgccac 275
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 313     gggctggtatttcgagggctg 333
               |||||||||||||||||||||
Sbjct: 2233651 gggctggtatttcgagggctg 2233671
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>gb|AC156016.2| Mus musculus BAC clone RP24-320A12 from chromosome 14, complete
             sequence
          Length = 154465

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    ctgggcgaaagcagcaagctc 105
             |||||||||||||||||||||
Sbjct: 23626 ctgggcgaaagcagcaagctc 23606
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 298    caagcaatacgacaagggctggta 321
              ||||||||| ||||||||||||||
Sbjct: 953867 caagcaatatgacaagggctggta 953890
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>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 85      ctgggcgaaagcagcaagctcccg 108
               ||||||||||||||| ||||||||
Sbjct: 2272552 ctgggcgaaagcagccagctcccg 2272575
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>ref|XM_478742.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1537

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  gcagccggcgccaggtgctg 53
           ||||||||||||||||||||
Sbjct: 145 gcagccggcgccaggtgctg 164
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>ref|XM_478741.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1716

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  gcagccggcgccaggtgctg 53
           ||||||||||||||||||||
Sbjct: 256 gcagccggcgccaggtgctg 275
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>gb|AF468296.1| Uncultured bacterium clone ARKIA-34 16S ribosomal RNA gene, partial
           sequence
          Length = 1427

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 80  actctctgggcgaaagcagcaagctccc 107
           ||||||||||||| || |||||||||||
Sbjct: 192 actctctgggcgagaggagcaagctccc 165
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>gb|DQ061922.1| Uncultured Russulaceae isolate IT7B-ECM clone 2 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 442

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 gtgagatggatattttgtat 203
           ||||||||||||||||||||
Sbjct: 40  gtgagatggatattttgtat 21
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>gb|DQ061920.1| Uncultured Russulaceae isolate IT7B-ECM clone 1 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 761

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 gtgagatggatattttgtat 203
           ||||||||||||||||||||
Sbjct: 160 gtgagatggatattttgtat 141
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>gb|DQ061919.1| Uncultured Russulaceae isolate IT7B-ECM clone 2 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 641

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 gtgagatggatattttgtat 203
           ||||||||||||||||||||
Sbjct: 40  gtgagatggatattttgtat 21
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>gb|DQ061893.1| Uncultured Russulaceae isolate IT7B-16 internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 763

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 gtgagatggatattttgtat 203
           ||||||||||||||||||||
Sbjct: 161 gtgagatggatattttgtat 142
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>gb|DQ061892.1| Uncultured Russulaceae isolate IT7B-1 internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 758

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 gtgagatggatattttgtat 203
           ||||||||||||||||||||
Sbjct: 160 gtgagatggatattttgtat 141
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>emb|AL160166.10| Human DNA sequence from clone RP11-159N19 on chromosome 9, complete
            sequence
          Length = 156964

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 452  catcatggcaaagcattttg 471
            ||||||||||||||||||||
Sbjct: 3071 catcatggcaaagcattttg 3052
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>emb|AL049732.11|HSDA14C6 Human DNA sequence from clone RP6-14C6 on chromosome Xp11.21-11.23
             Contains  the 3' end of the PFKFB1 gene for
             6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, and
             the TRO gene for trophinin, complete sequence
          Length = 103115

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   tgagttactcactgacactg 384
             ||||||||||||||||||||
Sbjct: 37215 tgagttactcactgacactg 37234
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>gb|AC022535.6| Homo sapiens chromosome 10 clone RP11-34C15, complete sequence
          Length = 178864

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 440   aatagaattctccatcatgg 459
             ||||||||||||||||||||
Sbjct: 62861 aatagaattctccatcatgg 62880
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>gb|AC091921.3| Homo sapiens chromosome 5 clone RP11-256N5, complete sequence
          Length = 172192

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 182   ctgtgagatggatattttgtatct 205
             |||||||||||||||||| |||||
Sbjct: 76743 ctgtgagatggatattttatatct 76720
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>ref|XM_691127.1| PREDICTED: Danio rerio similar to erythroblast membrane-associated
           protein (LOC567822), mRNA
          Length = 3567

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 caaggatgtcttaaagattc 228
           ||||||||||||||||||||
Sbjct: 330 caaggatgtcttaaagattc 349
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>ref|XM_682614.1| PREDICTED: Danio rerio similar to erythroblast membrane-associated
           protein (LOC559285), mRNA
          Length = 3315

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 caaggatgtcttaaagattc 228
           ||||||||||||||||||||
Sbjct: 330 caaggatgtcttaaagattc 349
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 39      cggcgccaggtgctgttctc 58
               ||||||||||||||||||||
Sbjct: 5211087 cggcgccaggtgctgttctc 5211068
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 34       gcagccggcgccaggtgctg 53
                ||||||||||||||||||||
Sbjct: 22635576 gcagccggcgccaggtgctg 22635595
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>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1773_H01
          Length = 146543

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    gcagccggcgccaggtgctg 53
             ||||||||||||||||||||
Sbjct: 53474 gcagccggcgccaggtgctg 53493
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>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1112_E08
          Length = 119926

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     gcagccggcgccaggtgctg 53
              ||||||||||||||||||||
Sbjct: 115958 gcagccggcgccaggtgctg 115977
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>dbj|AK107481.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-C02, full
           insert sequence
          Length = 1716

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  gcagccggcgccaggtgctg 53
           ||||||||||||||||||||
Sbjct: 256 gcagccggcgccaggtgctg 275
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>dbj|AK071983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089O03, full
           insert sequence
          Length = 1535

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  gcagccggcgccaggtgctg 53
           ||||||||||||||||||||
Sbjct: 145 gcagccggcgccaggtgctg 164
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 126     cttcgccgtcttcatcgccgccac 149
               |||||||| |||||||||||||||
Sbjct: 1516903 cttcgccgacttcatcgccgccac 1516926
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>gb|AY876913.1| Human enterovirus Hangzhou13-02, complete genome
          Length = 7456

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  ggattctattcattcactaccctc 281
            ||||| ||||||||||||||||||
Sbjct: 3240 ggattgtattcattcactaccctc 3217
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>gb|AY876912.1| Human enterovirus Ningbo3-02, complete genome
          Length = 7456

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  ggattctattcattcactaccctc 281
            ||||| ||||||||||||||||||
Sbjct: 3240 ggattgtattcattcactaccctc 3217
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>gb|U10555.1|YSCH9780 Saccharomyces cerevisiae chromosome VIII cosmid 9780
          Length = 24431

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   tcgttacctatgcttacaca 299
             ||||||||||||||||||||
Sbjct: 18275 tcgttacctatgcttacaca 18256
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>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    taggcggctggcttcttatg 255
              ||||||||||||||||||||
Sbjct: 346432 taggcggctggcttcttatg 346413


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,438,312
Number of Sequences: 3902068
Number of extensions: 4438312
Number of successful extensions: 81642
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 81201
Number of HSP's gapped (non-prelim): 435
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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