| Clone Name | bags25o10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465763.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2341 Score = 484 bits (244), Expect = e-133 Identities = 493/576 (85%) Strand = Plus / Plus Query: 3 aggacatttgcaaagatggcagcatatttaagaagatactagctgaaggcgagaagtggg 62 ||||||||||||| || || |||| || |||||| |||||||||||||| |||||||| Sbjct: 678 aggacatttgcaaggacggtggcatcttgaagaaggtactagctgaaggcacgaagtggg 737 Query: 63 agaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggatggga 122 |||| || | |||||| ||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 738 agaacccaagagaccgcgatgaagtttttgttaagtatgaggtgaggcttgaggatggga 797 Query: 123 ctcttgttacaaaatctgatggcgttgagttcactgtgaaagaagggcatttctgccctg 182 || |||| || |||||||||| || |||||||| |||||||| ||||||||||| |||| Sbjct: 798 ctgttgtagcagaatctgatggtgtcgagttcaccgtgaaagatgggcatttctgtcctg 857 Query: 183 ctgtatcgaaggctatcaagacaatgaagaagaatgagaaggccctccttacagtcaaac 242 | |||| |||||| | ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 858 ccatatccaaggctgtgaagactatgaagaagaatgagaaggccctcctcacagtcaaac 917 Query: 243 cacaatatggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtccccc 302 ||||||||||||| |||| ||||||||||||||| |||||| ||||||||| | |||| Sbjct: 918 cacaatatggcttcggtgagcaaggcaggccagccgctagagatgaagctgcaatacccc 977 Query: 303 ctaatgctatgttgcaaattgatcttcagttggtgtcctggaagacagtcactgagatag 362 ||||||||| ||||| ||| ||||| | ||||||||||||||| ||||||||||||| | Sbjct: 978 ctaatgctacattgcacattaatcttgaattggtgtcctggaaggcagtcactgagattg 1037 Query: 363 gcaatgacaagacgattctgaaaaagatcctccaggagggtgaaggctatgatcgtccca 422 | ||||| |||| || || || ||||||||||| ||||||||||||||||| ||||||| Sbjct: 1038 gtaatgataagaaaatcctcaagaagatcctccatgagggtgaaggctatgagcgtccca 1097 Query: 423 aagattgttcaactgtcaaagtgaaacttattgggaagttggatgatggcaccatgtttg 482 ||||| || ||||| ||||||||||||||| ||||| || ||||| ||||| |||| Sbjct: 1098 gtgattgcacacttgtcagagtgaaacttattggaaagttagaggatggtaccatatttg 1157 Query: 483 taaagaaaggtcatgatggggaagagccatttgagttcaagactgatgaggatcaggtga 542 | | | |||||||||||| || |||||||| ||||| ||||||||||| || || ||| Sbjct: 1158 tcacaagaggtcatgatggtgacgagccattcgagtttaagactgatgaagaccaagtgg 1217 Query: 543 ttgatgggcttgacaaagcagtgcttagcatgaaga 578 |||| ||||||||||||||||| ||||||||||||| Sbjct: 1218 ttgaagggcttgacaaagcagtacttagcatgaaga 1253
>dbj|AK073233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H01, full insert sequence Length = 2341 Score = 476 bits (240), Expect = e-131 Identities = 492/576 (85%) Strand = Plus / Plus Query: 3 aggacatttgcaaagatggcagcatatttaagaagatactagctgaaggcgagaagtggg 62 ||||||||||||| || || |||| || |||||| |||||||||||||| |||||||| Sbjct: 678 aggacatttgcaaggacggtggcatcttgaagaaggtactagctgaaggcacgaagtggg 737 Query: 63 agaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggatggga 122 |||| || | |||||| ||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 738 agaacccaagagaccgcgatgaagtttttgttaagtatgaggtgaggcttgaggatggga 797 Query: 123 ctcttgttacaaaatctgatggcgttgagttcactgtgaaagaagggcatttctgccctg 182 || |||| || |||||||||| || |||||||| |||||||| ||||||||||| |||| Sbjct: 798 ctgttgtagcagaatctgatggtgtcgagttcaccgtgaaagatgggcatttctgtcctg 857 Query: 183 ctgtatcgaaggctatcaagacaatgaagaagaatgagaaggccctccttacagtcaaac 242 | |||| |||||| | ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 858 ccatatccaaggctgtgaagactatgaagaagaatgagaaggccctcctcacagtcaaac 917 Query: 243 cacaatatggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtccccc 302 ||||||||||||| |||| |||||||||| |||| |||||| ||||||||| | |||| Sbjct: 918 cacaatatggcttcggtgagcaaggcaggtcagccgctagagatgaagctgcaatacccc 977 Query: 303 ctaatgctatgttgcaaattgatcttcagttggtgtcctggaagacagtcactgagatag 362 ||||||||| ||||| ||| ||||| | ||||||||||||||| ||||||||||||| | Sbjct: 978 ctaatgctacattgcacattaatcttgaattggtgtcctggaaggcagtcactgagattg 1037 Query: 363 gcaatgacaagacgattctgaaaaagatcctccaggagggtgaaggctatgatcgtccca 422 | ||||| |||| || || || ||||||||||| ||||||||||||||||| ||||||| Sbjct: 1038 gtaatgataagaaaatcctcaagaagatcctccatgagggtgaaggctatgagcgtccca 1097 Query: 423 aagattgttcaactgtcaaagtgaaacttattgggaagttggatgatggcaccatgtttg 482 ||||| || ||||| ||||||||||||||| ||||| || ||||| ||||| |||| Sbjct: 1098 gtgattgcacacttgtcagagtgaaacttattggaaagttagaggatggtaccatatttg 1157 Query: 483 taaagaaaggtcatgatggggaagagccatttgagttcaagactgatgaggatcaggtga 542 | | | |||||||||||| || |||||||| ||||| ||||||||||| || || ||| Sbjct: 1158 tcacaagaggtcatgatggtgacgagccattcgagtttaagactgatgaagaccaagtgg 1217 Query: 543 ttgatgggcttgacaaagcagtgcttagcatgaaga 578 |||| ||||||||||||||||| ||||||||||||| Sbjct: 1218 ttgaagggcttgacaaagcagtacttagcatgaaga 1253
>gb|AY106502.1| Zea mays PCO063683 mRNA sequence Length = 559 Score = 157 bits (79), Expect = 5e-35 Identities = 178/211 (84%) Strand = Plus / Plus Query: 50 ggcgagaagtgggagaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaagg 109 ||||| ||||||||||| |||| ||| | |||||||||| ||||||| ||||| |||||| Sbjct: 280 ggcgataagtgggagaaccccagagatcctgatgaagttgttgttaagtatgaagcaagg 339 Query: 110 cttgaggatgggactcttgttacaaaatctgatggcgttgagttcactgtgaaagaaggg 169 ||||||||||| || |||| | ||||||||||| |||||||||||||||| ||| || Sbjct: 340 cttgaggatggaacagttgtatcgaaatctgatggtgttgagttcactgtgagagatggc 399 Query: 170 catttctgccctgctgtatcgaaggctatcaagacaatgaagaagaatgagaaggccctc 229 ||||||||||| |||| |||||| ||||||| |||||||| || |||||||||| | Sbjct: 400 gtattctgccctgccatatcaaaggctgtcaagactatgaagaaaaacgagaaggcccac 459 Query: 230 cttacagtcaaaccacaatatggctttggtg 260 || || |||| ||||||||||||||||||| Sbjct: 460 ctcactgtcatgccacaatatggctttggtg 490
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 147 bits (74), Expect = 5e-32 Identities = 149/174 (85%) Strand = Plus / Minus Query: 249 atggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatg 308 ||||||| |||| ||||||||||||||| |||||| ||||||||| | |||||||||| Sbjct: 17258535 atggcttcggtgagcaaggcaggccagccgctagagatgaagctgcaataccccctaatg 17258476 Query: 309 ctatgttgcaaattgatcttcagttggtgtcctggaagacagtcactgagataggcaatg 368 ||| ||||| ||| ||||| | ||||||||||||||| ||||||||||||| || |||| Sbjct: 17258475 ctacattgcacattaatcttgaattggtgtcctggaaggcagtcactgagattggtaatg 17258416 Query: 369 acaagacgattctgaaaaagatcctccaggagggtgaaggctatgatcgtccca 422 | |||| || || || ||||||||||| ||||||||||||||||| ||||||| Sbjct: 17258415 ataagaaaatcctcaagaagatcctccatgagggtgaaggctatgagcgtccca 17258362 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Minus Query: 442 agtgaaacttattgggaagttggatgatggcaccatgtttgtaaagaaaggtcatgatgg 501 ||||||||||||||| ||||| || ||||| ||||| ||||| | | |||||||||||| Sbjct: 17258237 agtgaaacttattggaaagttagaggatggtaccatatttgtcacaagaggtcatgatgg 17258178 Query: 502 ggaagagccatttgagttcaagactgatgaggatcaggtgattgatgggcttgacaaagc 561 || |||||||| ||||| ||||||||||| || || ||| |||| |||||||||||||| Sbjct: 17258177 tgacgagccattcgagtttaagactgatgaagaccaagtggttgaagggcttgacaaagc 17258118 Query: 562 agtgcttagcatgaaga 578 ||| ||||||||||||| Sbjct: 17258117 agtacttagcatgaaga 17258101 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 166 agggcatttctgccctgctgtatcgaaggctatcaagacaatgaagaagaatgagaaggc 225 |||||||||||| ||||| |||| |||||| | ||||| |||||||||||||||||||| Sbjct: 17258696 agggcatttctgtcctgccatatccaaggctgtgaagactatgaagaagaatgagaaggc 17258637 Query: 226 cctccttacagtcaaaccacaat 248 |||||| |||||||||||||||| Sbjct: 17258636 cctcctcacagtcaaaccacaat 17258614 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 3 aggacatttgcaaagatggcagcatatttaagaagatactagctgaaggcgagaagtggg 62 ||||||||||||| || || |||| || |||||| |||||||||||||| |||||||| Sbjct: 17259030 aggacatttgcaaggacggtggcatcttgaagaaggtactagctgaaggcacgaagtggg 17258971 Query: 63 agaatcccaaagaccgtgatgaagtttttg 92 |||| || | |||||| ||||||||||||| Sbjct: 17258970 agaacccaagagaccgcgatgaagtttttg 17258941 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 92 gttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgttgag 151 ||||| ||||||| |||||||||||||||||| |||| || |||||||||| || ||| Sbjct: 17258852 gttaagtatgaggtgaggcttgaggatgggactgttgtagcagaatctgatggtgtcgag 17258793 Query: 152 ttcactgtgaaaga 165 ||||| |||||||| Sbjct: 17258792 ttcaccgtgaaaga 17258779
>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0579G08 Length = 164452 Score = 147 bits (74), Expect = 5e-32 Identities = 149/174 (85%) Strand = Plus / Minus Query: 249 atggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatg 308 ||||||| |||| ||||||||||||||| |||||| ||||||||| | |||||||||| Sbjct: 31218 atggcttcggtgagcaaggcaggccagccgctagagatgaagctgcaataccccctaatg 31159 Query: 309 ctatgttgcaaattgatcttcagttggtgtcctggaagacagtcactgagataggcaatg 368 ||| ||||| ||| ||||| | ||||||||||||||| ||||||||||||| || |||| Sbjct: 31158 ctacattgcacattaatcttgaattggtgtcctggaaggcagtcactgagattggtaatg 31099 Query: 369 acaagacgattctgaaaaagatcctccaggagggtgaaggctatgatcgtccca 422 | |||| || || || ||||||||||| ||||||||||||||||| ||||||| Sbjct: 31098 ataagaaaatcctcaagaagatcctccatgagggtgaaggctatgagcgtccca 31045 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Minus Query: 442 agtgaaacttattgggaagttggatgatggcaccatgtttgtaaagaaaggtcatgatgg 501 ||||||||||||||| ||||| || ||||| ||||| ||||| | | |||||||||||| Sbjct: 30920 agtgaaacttattggaaagttagaggatggtaccatatttgtcacaagaggtcatgatgg 30861 Query: 502 ggaagagccatttgagttcaagactgatgaggatcaggtgattgatgggcttgacaaagc 561 || |||||||| ||||| ||||||||||| || || ||| |||| |||||||||||||| Sbjct: 30860 tgacgagccattcgagtttaagactgatgaagaccaagtggttgaagggcttgacaaagc 30801 Query: 562 agtgcttagcatgaaga 578 ||| ||||||||||||| Sbjct: 30800 agtacttagcatgaaga 30784 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 166 agggcatttctgccctgctgtatcgaaggctatcaagacaatgaagaagaatgagaaggc 225 |||||||||||| ||||| |||| |||||| | ||||| |||||||||||||||||||| Sbjct: 31379 agggcatttctgtcctgccatatccaaggctgtgaagactatgaagaagaatgagaaggc 31320 Query: 226 cctccttacagtcaaaccacaat 248 |||||| |||||||||||||||| Sbjct: 31319 cctcctcacagtcaaaccacaat 31297 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 3 aggacatttgcaaagatggcagcatatttaagaagatactagctgaaggcgagaagtggg 62 ||||||||||||| || || |||| || |||||| |||||||||||||| |||||||| Sbjct: 31713 aggacatttgcaaggacggtggcatcttgaagaaggtactagctgaaggcacgaagtggg 31654 Query: 63 agaatcccaaagaccgtgatgaagtttttg 92 |||| || | |||||| ||||||||||||| Sbjct: 31653 agaacccaagagaccgcgatgaagtttttg 31624 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 92 gttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgttgag 151 ||||| ||||||| |||||||||||||||||| |||| || |||||||||| || ||| Sbjct: 31535 gttaagtatgaggtgaggcttgaggatgggactgttgtagcagaatctgatggtgtcgag 31476 Query: 152 ttcactgtgaaaga 165 ||||| |||||||| Sbjct: 31475 ttcaccgtgaaaga 31462
>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0048K16 Length = 159891 Score = 147 bits (74), Expect = 5e-32 Identities = 149/174 (85%) Strand = Plus / Minus Query: 249 atggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatg 308 ||||||| |||| ||||||||||||||| |||||| ||||||||| | |||||||||| Sbjct: 129302 atggcttcggtgagcaaggcaggccagccgctagagatgaagctgcaataccccctaatg 129243 Query: 309 ctatgttgcaaattgatcttcagttggtgtcctggaagacagtcactgagataggcaatg 368 ||| ||||| ||| ||||| | ||||||||||||||| ||||||||||||| || |||| Sbjct: 129242 ctacattgcacattaatcttgaattggtgtcctggaaggcagtcactgagattggtaatg 129183 Query: 369 acaagacgattctgaaaaagatcctccaggagggtgaaggctatgatcgtccca 422 | |||| || || || ||||||||||| ||||||||||||||||| ||||||| Sbjct: 129182 ataagaaaatcctcaagaagatcctccatgagggtgaaggctatgagcgtccca 129129 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Minus Query: 442 agtgaaacttattgggaagttggatgatggcaccatgtttgtaaagaaaggtcatgatgg 501 ||||||||||||||| ||||| || ||||| ||||| ||||| | | |||||||||||| Sbjct: 129004 agtgaaacttattggaaagttagaggatggtaccatatttgtcacaagaggtcatgatgg 128945 Query: 502 ggaagagccatttgagttcaagactgatgaggatcaggtgattgatgggcttgacaaagc 561 || |||||||| ||||| ||||||||||| || || ||| |||| |||||||||||||| Sbjct: 128944 tgacgagccattcgagtttaagactgatgaagaccaagtggttgaagggcttgacaaagc 128885 Query: 562 agtgcttagcatgaaga 578 ||| ||||||||||||| Sbjct: 128884 agtacttagcatgaaga 128868 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 166 agggcatttctgccctgctgtatcgaaggctatcaagacaatgaagaagaatgagaaggc 225 |||||||||||| ||||| |||| |||||| | ||||| |||||||||||||||||||| Sbjct: 129463 agggcatttctgtcctgccatatccaaggctgtgaagactatgaagaagaatgagaaggc 129404 Query: 226 cctccttacagtcaaaccacaat 248 |||||| |||||||||||||||| Sbjct: 129403 cctcctcacagtcaaaccacaat 129381 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 3 aggacatttgcaaagatggcagcatatttaagaagatactagctgaaggcgagaagtggg 62 ||||||||||||| || || |||| || |||||| |||||||||||||| |||||||| Sbjct: 129797 aggacatttgcaaggacggtggcatcttgaagaaggtactagctgaaggcacgaagtggg 129738 Query: 63 agaatcccaaagaccgtgatgaagtttttg 92 |||| || | |||||| ||||||||||||| Sbjct: 129737 agaacccaagagaccgcgatgaagtttttg 129708 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 92 gttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgttgag 151 ||||| ||||||| |||||||||||||||||| |||| || |||||||||| || ||| Sbjct: 129619 gttaagtatgaggtgaggcttgaggatgggactgttgtagcagaatctgatggtgtcgag 129560 Query: 152 ttcactgtgaaaga 165 ||||| |||||||| Sbjct: 129559 ttcaccgtgaaaga 129546
>ref|NM_113429.3| Arabidopsis thaliana ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase AT3G25230 (ROF1) mRNA, complete cds Length = 1974 Score = 123 bits (62), Expect = 7e-25 Identities = 188/230 (81%) Strand = Plus / Plus Query: 29 tttaagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagtt 88 ||||||||||| || |||| || ||||||||||||||||| || |||| |||||||||| Sbjct: 519 tttaagaagattcttgctgttggagagaagtgggagaatccaaaggaccttgatgaagtt 578 Query: 89 tttgttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgtt 148 ||||||| | |||||| | ||||||||||| ||| ||||| ||||||||||| || Sbjct: 579 cttgttaagtttgaggcgaaacttgaggatggtactgttgttgggaaatctgatggtgtg 638 Query: 149 gagttcactgtgaaagaagggcatttctgccctgctgtatcgaaggctatcaagacaatg 208 ||||||||||| ||||| || |||||||||||||| | | |||||| | || || ||| Sbjct: 639 gagttcactgttaaagatggtcatttctgccctgcacttactaaggctgtgaaaactatg 698 Query: 209 aagaagaatgagaaggccctccttacagtcaaaccacaatatggctttgg 258 || ||| ||| |||| ||| || ||||| |||||||||||||| ||||| Sbjct: 699 aaaaagggtgaaaaggtccttctgacagttaaaccacaatatggttttgg 748
>gb|U49453.1|ATU49453 Arabidopsis thaliana FK506 binding protein FKBP62 (ROF1) mRNA, complete cds Length = 1934 Score = 123 bits (62), Expect = 7e-25 Identities = 188/230 (81%) Strand = Plus / Plus Query: 29 tttaagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagtt 88 ||||||||||| || |||| || ||||||||||||||||| || |||| |||||||||| Sbjct: 470 tttaagaagattcttgctgttggagagaagtgggagaatccaaaggaccttgatgaagtt 529 Query: 89 tttgttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgtt 148 ||||||| | |||||| | ||||||||||| ||| ||||| ||||||||||| || Sbjct: 530 cttgttaagtttgaggcgaaacttgaggatggtactgttgttgggaaatctgatggtgtg 589 Query: 149 gagttcactgtgaaagaagggcatttctgccctgctgtatcgaaggctatcaagacaatg 208 ||||||||||| ||||| || |||||||||||||| | | |||||| | || || ||| Sbjct: 590 gagttcactgttaaagatggtcatttctgccctgcacttactaaggctgtgaaaactatg 649 Query: 209 aagaagaatgagaaggccctccttacagtcaaaccacaatatggctttgg 258 || ||| ||| |||| ||| || ||||| |||||||||||||| ||||| Sbjct: 650 aaaaagggtgaaaaggtccttctgacagttaaaccacaatatggttttgg 699
>ref|XM_472023.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1758 Score = 99.6 bits (50), Expect = 1e-17 Identities = 146/178 (82%) Strand = Plus / Plus Query: 134 aaatctgatggcgttgagttcactgtgaaagaagggcatttctgccctgctgtatcgaag 193 |||||||| || |||||||| |||| ||||| || |||||||||| || | || ||| Sbjct: 607 aaatctgacggtgttgagtttgctgtcaaagatggctatttctgcccggcgctttcaaag 666 Query: 194 gctatcaagacaatgaagaagaatgagaaggccctccttacagtcaaaccacaatatggc 253 ||| ||||||| ||||||||| ||||||| |||||| || ||||| |||||||||||| Sbjct: 667 gctgtcaagacgatgaagaagggcgagaaggtcctcctcactgtcaagccacaatatggc 726 Query: 254 tttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatgcta 311 ||||||| |||||||| ||||||||| ||| |||||||| || || || ||||||| Sbjct: 727 tttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatgcta 784 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 485 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgagga 534 |||||||| |||||||| || |||||||||||||||| ||| |||||||| Sbjct: 958 aagaaagggcatgatggtgatgagccatttgagttcaggacagatgagga 1007
>gb|AF140495.2| Oryza sativa (japonica cultivar-group) FK506-binding protein mRNA, complete cds Length = 2233 Score = 99.6 bits (50), Expect = 1e-17 Identities = 146/178 (82%) Strand = Plus / Plus Query: 134 aaatctgatggcgttgagttcactgtgaaagaagggcatttctgccctgctgtatcgaag 193 |||||||| || |||||||| |||| ||||| || |||||||||| || | || ||| Sbjct: 690 aaatctgacggtgttgagtttgctgtcaaagatggctatttctgcccggcgctttcaaag 749 Query: 194 gctatcaagacaatgaagaagaatgagaaggccctccttacagtcaaaccacaatatggc 253 ||| ||||||| ||||||||| ||||||| |||||| || ||||| |||||||||||| Sbjct: 750 gctgtcaagacgatgaagaagggcgagaaggtcctcctcactgtcaagccacaatatggc 809 Query: 254 tttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatgcta 311 ||||||| |||||||| ||||||||| ||| |||||||| || || || ||||||| Sbjct: 810 tttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatgcta 867 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 485 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgagga 534 |||||||| |||||||| || |||||||||||||||| ||| |||||||| Sbjct: 1041 aagaaagggcatgatggtgatgagccatttgagttcaggacagatgagga 1090
>dbj|AK100844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123G09, full insert sequence Length = 2162 Score = 99.6 bits (50), Expect = 1e-17 Identities = 146/178 (82%) Strand = Plus / Plus Query: 134 aaatctgatggcgttgagttcactgtgaaagaagggcatttctgccctgctgtatcgaag 193 |||||||| || |||||||| |||| ||||| || |||||||||| || | || ||| Sbjct: 693 aaatctgacggtgttgagtttgctgtcaaagatggctatttctgcccggcgctttcaaag 752 Query: 194 gctatcaagacaatgaagaagaatgagaaggccctccttacagtcaaaccacaatatggc 253 ||| ||||||| ||||||||| ||||||| |||||| || ||||| |||||||||||| Sbjct: 753 gctgtcaagacgatgaagaagggcgagaaggtcctcctcactgtcaagccacaatatggc 812 Query: 254 tttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatgcta 311 ||||||| |||||||| ||||||||| ||| |||||||| || || || ||||||| Sbjct: 813 tttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatgcta 870 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 485 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgagga 534 |||||||| |||||||| || |||||||||||||||| ||| |||||||| Sbjct: 1044 aagaaagggcatgatggtgatgagccatttgagttcaggacagatgagga 1093
>ref|XM_483423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2100 Score = 69.9 bits (35), Expect = 9e-09 Identities = 131/163 (80%) Strand = Plus / Plus Query: 3 aggacatttgcaaagatggcagcatatttaagaagatactagctgaaggcgagaagtggg 62 ||||||||||| ||||||| | ||||| ||||||||||| || || || || |||| Sbjct: 571 aggacatttgccaagatggtggtatattcaagaagatactgaaggagggagaaaaatggg 630 Query: 63 agaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggatggga 122 |||| || ||||| | ||||||||| ||||| ||||||||||| ||||||||||||| | Sbjct: 631 agaacccaaaagatcttgatgaagtatttgtgaaatatgaggctcggcttgaggatggca 690 Query: 123 ctcttgttacaaaatctgatggcgttgagttcactgtgaaaga 165 || || | |||| ||||| |||| ||| || ||||| ||||| Sbjct: 691 ctgttatatcaaagtctgagggcgctgaatttactgttaaaga 733 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 505 agagccatttgagttcaagactgatgaggatcaggtgattgatgg 549 |||||||||||| |||||||||||||| || |||| |||||||| Sbjct: 1073 agagccatttgaattcaagactgatgaagaggaggtcattgatgg 1117
>dbj|AK103172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121G16, full insert sequence Length = 2100 Score = 69.9 bits (35), Expect = 9e-09 Identities = 131/163 (80%) Strand = Plus / Plus Query: 3 aggacatttgcaaagatggcagcatatttaagaagatactagctgaaggcgagaagtggg 62 ||||||||||| ||||||| | ||||| ||||||||||| || || || || |||| Sbjct: 571 aggacatttgccaagatggtggtatattcaagaagatactgaaggagggagaaaaatggg 630 Query: 63 agaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggatggga 122 |||| || ||||| | ||||||||| ||||| ||||||||||| ||||||||||||| | Sbjct: 631 agaacccaaaagatcttgatgaagtatttgtgaaatatgaggctcggcttgaggatggca 690 Query: 123 ctcttgttacaaaatctgatggcgttgagttcactgtgaaaga 165 || || | |||| ||||| |||| ||| || ||||| ||||| Sbjct: 691 ctgttatatcaaagtctgagggcgctgaatttactgttaaaga 733 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 505 agagccatttgagttcaagactgatgaggatcaggtgattgatgg 549 |||||||||||| |||||||||||||| || |||| |||||||| Sbjct: 1073 agagccatttgaattcaagactgatgaagaggaggtcattgatgg 1117
>gb|AY104504.1| Zea mays PCO127462 mRNA sequence Length = 2108 Score = 65.9 bits (33), Expect = 1e-07 Identities = 129/161 (80%) Strand = Plus / Plus Query: 5 gacatttgcaaagatggcagcatatttaagaagatactagctgaaggcgagaagtgggag 64 |||||||||||||||||| ||||||| |||||||| || || || ||||| |||||| Sbjct: 603 gacatttgcaaagatggcggcatattcaagaagatccttaaagagggagagaaatgggag 662 Query: 65 aatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggatgggact 124 || || || || | ||||||||| |||| ||||||||||| | || || ||||| ||| Sbjct: 663 aacccaaaggatcctgatgaagtacttgtgaaatatgaggcccgtctggaagatggtact 722 Query: 125 cttgttacaaaatctgatggcgttgagttcactgtgaaaga 165 |||| | || ||||| || |||||||| ||||||||||| Sbjct: 723 gttgtatccaagtctgagggggttgagtttactgtgaaaga 763
>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07, complete sequence Length = 138383 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 485 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgagga 534 |||||||| |||||||| || |||||||||||||||| ||| |||||||| Sbjct: 76550 aagaaagggcatgatggtgatgagccatttgagttcaggacagatgagga 76501 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 249 atggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatg 308 |||||||||||| |||||||| ||||||||| ||| |||||||| || || || |||| Sbjct: 76884 atggctttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatg 76825 Query: 309 cta 311 ||| Sbjct: 76824 cta 76822
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 485 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgagga 534 |||||||| |||||||| || |||||||||||||||| ||| |||||||| Sbjct: 16826119 aagaaagggcatgatggtgatgagccatttgagttcaggacagatgagga 16826070 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 249 atggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatg 308 |||||||||||| |||||||| ||||||||| ||| |||||||| || || || |||| Sbjct: 16826453 atggctttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatg 16826394 Query: 309 cta 311 ||| Sbjct: 16826393 cta 16826391 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 gttcaactgtcaaagtgaaac 449 ||||||||||||||||||||| Sbjct: 26010705 gttcaactgtcaaagtgaaac 26010725
>ref|NM_124233.2| Arabidopsis thaliana FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase AT5G48570 mRNA, complete cds Length = 2130 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 59 tgggagaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggat 118 |||||||| || ||||||| ||||||||||| || || ||||| || ||||||||||| Sbjct: 712 tgggagaagccaaaagaccttgatgaagtttacgtcaagtatgaagctcggcttgaggat 771 Query: 119 gggactcttgttacaaaatctgatggcgttgagttcactgtgaaagaagggcatttctgc 178 || || ||||| ||| |||||||| || ||||| ||||| || || || |||||||| Sbjct: 772 ggcaccattgttggaaagtctgatggtgtagagtttactgtcaaggagggccatttctgt 831 Query: 179 cctgc 183 ||||| Sbjct: 832 cctgc 836
>emb|X86903.1|TAFKBP70 T.aestivum mRNA for peptidylprolyl cis-trans isomerase, FK506 Length = 2027 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 79 tgatgaagtttttgttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatc 138 ||||||||| ||||| ||||||||||| ||||||||||||| ||| |||| | || || Sbjct: 630 tgatgaagtatttgtgaaatatgaggctcggcttgaggatggtactgttgtgtccaagtc 689 Query: 139 tgatggcgttgagttcactgtgaaagaagggcatttctgccctgc 183 ||| || ||||| || ||||| ||||| || || |||||||||| Sbjct: 690 tgagggggttgaatttactgttaaagatggacacctctgccctgc 734 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 504 aagagccatttgagttcaagactgatga 531 ||||||||||||| || ||||||||||| Sbjct: 1055 aagagccatttgaatttaagactgatga 1082
>emb|BX831626.1|CNS0A0YB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1890 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 59 tgggagaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggat 118 |||||||| || ||||||| ||||||||||| || || ||||| || ||||||||||| Sbjct: 582 tgggagaagccaaaagaccttgatgaagtttacgtcaagtatgaagctcggcttgaggat 641 Query: 119 gggactcttgttacaaaatctgatggcgttgagttcactgtgaaagaagggcatttctgc 178 || || ||||| ||| |||||||| || ||||| ||||| || || || |||||||| Sbjct: 642 ggcaccattgttggaaagtctgatggtgtagagtttactgtcaaggagggccatttctgt 701 Query: 179 cctgc 183 ||||| Sbjct: 702 cctgc 706
>dbj|AB026647.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJL12 Length = 81542 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 29 tttaagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagtt 88 ||||||||||| || |||| || ||||||||||||||||| || |||| |||||||||| Sbjct: 57913 tttaagaagattcttgctgttggagagaagtgggagaatccaaaggaccttgatgaagtt 57972 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 110 cttgaggatgggactcttgttacaaaatctgatggcgttgagttcactgtgaaaga 165 ||||||||||| ||| ||||| ||||||||||| || ||||||||||| ||||| Sbjct: 58082 cttgaggatggtactgttgttgggaaatctgatggtgtggagttcactgttaaaga 58137
>gb|U57838.1|ATU57838 Arabidopsis thaliana FK506 binding protein FKBP62 (ROF1) gene, complete cds Length = 4029 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 29 tttaagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagtt 88 ||||||||||| || |||| || ||||||||||||||||| || |||| |||||||||| Sbjct: 1227 tttaagaagattcttgctgttggagagaagtgggagaatccaaaggaccttgatgaagtt 1286 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 110 cttgaggatgggactcttgttacaaaatctgatggcgttgagttcactgtgaaaga 165 ||||||||||| ||| ||||| ||||||||||| || ||||||||||| ||||| Sbjct: 1394 cttgaggatggtactgttgttgggaaatctgatggtgtggagttcactgttaaaga 1449
>gb|AY389590.1| Hyacinthus orientalis peptidyl-prolyl cis-trans isomerase mRNA, partial cds Length = 648 Score = 48.1 bits (24), Expect = 0.032 Identities = 66/80 (82%) Strand = Plus / Plus Query: 134 aaatctgatggcgttgagttcactgtgaaagaagggcatttctgccctgctgtatcgaag 193 |||||||||| ||||| ||||| || ||||| ||| | ||||| ||||| || | ||| Sbjct: 14 aaatctgatgaagttgaattcacggttaaagatgggtacttctgtcctgcgctagctaag 73 Query: 194 gctatcaagacaatgaagaa 213 ||| |||||||||||||||| Sbjct: 74 gctgtcaagacaatgaagaa 93
>emb|Z82286.1|CEW02A2 Caenorhabditis elegans Cosmid W02A2, complete sequence Length = 35879 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 196 tatcaagacaatgaagaagaatgagaag 223 ||||||||||||||| |||||||||||| Sbjct: 24561 tatcaagacaatgaaaaagaatgagaag 24534
>emb|Y07636.1|TAFKBP77 T.aestivum mRNA for peptidylprolyl isomerase Length = 1999 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Plus Query: 200 aagacaatgaagaagaatgagaaggccctccttacagtcaaaccacaatatggctttggt 259 ||||| ||||||||| ||||||| |||||| || ||||| ||||||||||| ||||| Sbjct: 709 aagaccatgaagaagggcgagaaggtcctcctgaccgtcaagccacaatatggttttggc 768 Query: 260 gggcaagg 267 | |||||| Sbjct: 769 gagcaagg 776 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 485 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgaggatcaggt 540 |||||||| ||||| || || || ||||| ||||||||||| || ||||| ||||| Sbjct: 994 aagaaaggacatgaaggcgacgaaccattcgagttcaagacggacgaggagcaggt 1049
>gb|AC153129.20| Medicago truncatula clone mth2-103o2, complete sequence Length = 111951 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 92 gttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatg 143 ||||| ||||| ||| | ||||| ||||| |||||||||| ||||||||||| Sbjct: 102678 gttaagtatgaagcacgtcttgatgatggaactcttgttaaaaaatctgatg 102729 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 110 cttgaggatgggactcttgttacaaaatctgatg 143 ||||| ||||| |||||||||| ||||||||||| Sbjct: 88237 cttgatgatggaactcttgttagaaaatctgatg 88270 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 539 gtgattgatgggcttgacaaagcagtgcttagcatgaaga 578 ||||||||||||||||| ||||| || || | |||||||| Sbjct: 89076 gtgattgatgggcttgataaagctgtactgaccatgaaga 89115
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 505 agagccatttgagttcaagactgatga 531 |||||||||||| |||||||||||||| Sbjct: 26134154 agagccatttgaattcaagactgatga 26134180 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 3 aggacatttgcaaagatggcagcatatttaagaagatact 42 ||||||||||| ||||||| | ||||| ||||||||||| Sbjct: 26133290 aggacatttgccaagatggtggtatattcaagaagatact 26133329
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 505 agagccatttgagttcaagactgatga 531 |||||||||||| |||||||||||||| Sbjct: 78085 agagccatttgaattcaagactgatga 78111 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 3 aggacatttgcaaagatggcagcatatttaagaagatact 42 ||||||||||| ||||||| | ||||| ||||||||||| Sbjct: 77221 aggacatttgccaagatggtggtatattcaagaagatact 77260
>gb|BT012788.1| Lycopersicon esculentum clone 113780F, mRNA sequence Length = 2264 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 512 tttgagttcaagactgatgaggatcaggtgattgatgggcttgaca 557 |||||||| ||||| |||||||| || || ||||||||||| |||| Sbjct: 1167 tttgagtttaagacagatgaggaacaagtaattgatgggctggaca 1212
>ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosome 20 Length = 477159 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 tctgatggcgttgagttcactg 158 |||||||||||||||||||||| Sbjct: 309063 tctgatggcgttgagttcactg 309042
>gb|AC126793.13| Medicago truncatula clone mth2-17m16, complete sequence Length = 109787 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 110 cttgaggatgggactcttgttacaaaatctgatg 143 ||||| ||||| |||||||||| ||||||||||| Sbjct: 47591 cttgatgatggaactcttgttagaaaatctgatg 47624 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 539 gtgattgatgggcttgacaaagcagtgcttagcatgaaga 578 ||||||||||||||||| ||||| || || | |||||||| Sbjct: 33105 gtgattgatgggcttgataaagctgtactgaccatgaaga 33144
>emb|AL121894.26|HSA218C14 Human DNA sequence from clone RP11-218C14 on chromosome 20 Contains the 3' end of a novel gene, two genes for novel proteins similar to cystatin 9-like (mouse) (CST9L), the CST9L gene for cystatin 9-like (mouse), a cystatin 9-like (mouse) pseudogene, the CST3 gene for cystatin C, a novel gene and a CpG island, complete sequence Length = 141079 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 tctgatggcgttgagttcactg 158 |||||||||||||||||||||| Sbjct: 76953 tctgatggcgttgagttcactg 76974
>gb|AC021017.4|AC021017 Homo sapiens BAC clone RP11-382E10 from 8, complete sequence Length = 182988 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 131 acaaaatctgatggcgttgagt 152 |||||||||||||||||||||| Sbjct: 78683 acaaaatctgatggcgttgagt 78662
>ref|XM_473208.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 gttcaactgtcaaagtgaaac 449 ||||||||||||||||||||| Sbjct: 805 gttcaactgtcaaagtgaaac 785
>gb|DQ058627.1| Rhododendron macrophyllum RNA polymerase II second largest subunit (RPB2) mRNA, complete cds Length = 4214 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 483 taaagaaaggtcatgatggggaaga 507 ||||||||||||||||||| ||||| Sbjct: 693 taaagaaaggtcatgatggtgaaga 717
>gb|AC182738.1| Gasterosteus aculeatus clone VMRC26-26C14, complete sequence Length = 168680 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 aaagatggcagcatatttaag 34 ||||||||||||||||||||| Sbjct: 120035 aaagatggcagcatatttaag 120015 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 aaagatggcagcatatttaag 34 ||||||||||||||||||||| Sbjct: 78538 aaagatggcagcatatttaag 78518 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 aaagatggcagcatatttaag 34 ||||||||||||||||||||| Sbjct: 44163 aaagatggcagcatatttaag 44143
>dbj|AB015471.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9B18 Length = 10085 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 532 ggatcaggtgattgatgggcttgac 556 ||||||||||||||||| ||||||| Sbjct: 6104 ggatcaggtgattgatgagcttgac 6080
>dbj|AK102988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116C14, full insert sequence Length = 1432 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 gttcaactgtcaaagtgaaac 449 ||||||||||||||||||||| Sbjct: 999 gttcaactgtcaaagtgaaac 979
>dbj|AK073454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042J02, full insert sequence Length = 3038 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 gttcaactgtcaaagtgaaac 449 ||||||||||||||||||||| Sbjct: 2605 gttcaactgtcaaagtgaaac 2585
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 gttcaactgtcaaagtgaaac 449 ||||||||||||||||||||| Sbjct: 45032 gttcaactgtcaaagtgaaac 45052
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 gttcaactgtcaaagtgaaac 449 ||||||||||||||||||||| Sbjct: 136967 gttcaactgtcaaagtgaaac 136987
>gb|AC148987.3| Mus musculus BAC clone RP24-322F4 from 6, complete sequence Length = 222379 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gaagaagaatgagaaggccct 228 ||||||||||||||||||||| Sbjct: 142420 gaagaagaatgagaaggccct 142440
>gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromosome unknown, complete sequence Length = 207441 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 533 gatcaggtgattgatgggctt 553 ||||||||||||||||||||| Sbjct: 178480 gatcaggtgattgatgggctt 178500
>gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, complete sequence Length = 168677 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tatgaggcaaggcttgagga 117 |||||||||||||||||||| Sbjct: 66739 tatgaggcaaggcttgagga 66758
>gb|AC124475.3| Mus musculus BAC clone RP24-92F8 from chromosome 8, complete sequence Length = 212858 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 acttattgggaagttggatg 467 |||||||||||||||||||| Sbjct: 27672 acttattgggaagttggatg 27691
>gb|AC165155.2| Mus musculus BAC clone RP23-293N22 from chromosome 14, complete sequence Length = 226292 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 caagacaatgaagaagaatgagaa 222 ||||||||||||||| |||||||| Sbjct: 173090 caagacaatgaagaataatgagaa 173113
>ref|XM_949047.1| Theileria annulata strain Ankara hypothetical protein (TA02995) partial mRNA Length = 4953 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 agagccatttgagttcaagactga 528 ||||||| |||||||||||||||| Sbjct: 957 agagccagttgagttcaagactga 980
>gb|AC136740.10| Mus musculus chromosome 7, clone RP23-137A24, complete sequence Length = 219863 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ggtgtcctggaagacagtca 353 |||||||||||||||||||| Sbjct: 128059 ggtgtcctggaagacagtca 128078
>emb|AL442126.6| Human DNA sequence from clone RP11-409J23 on chromosome 13, complete sequence Length = 133789 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aagtttttgttaaatatgag 103 |||||||||||||||||||| Sbjct: 41063 aagtttttgttaaatatgag 41082
>emb|AL139341.9| Human DNA sequence from clone RP11-99N20 on chromosome 10 Contains the 5' end of a novel gene, the gene for glutathione transferase omega 1 (GSTO1), the 5' end of a variant of the gene for a novel glutathione-S-transferase and two CpG islands, complete sequence Length = 104378 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 aatgaagaagaatgagaagg 224 |||||||||||||||||||| Sbjct: 73024 aatgaagaagaatgagaagg 73043
>gb|AC032019.7| Homo sapiens chromosome 17, clone RP11-277J6, complete sequence Length = 172709 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ggcaaggcaggccagcttct 280 |||||||||||||||||||| Sbjct: 91383 ggcaaggcaggccagcttct 91402
>gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosome 9, complete sequence Length = 205094 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aaagattgttcaactgtcaa 441 |||||||||||||||||||| Sbjct: 11665 aaagattgttcaactgtcaa 11684
>gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete sequence Length = 119559 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 aaagatggcagcatatttaa 33 |||||||||||||||||||| Sbjct: 68670 aaagatggcagcatatttaa 68689
>gb|DP000056.1| Pan troglodytes chromosome Y chry_random_3 genomic scaffold Length = 331329 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 gaagctgcagtcccccctaatgct 310 ||||||||||||| |||||||||| Sbjct: 288349 gaagctgcagtcctccctaatgct 288372
>gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B2 map CIC10F02, complete sequence Length = 90283 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 atgaagtttttgttaaatat 100 |||||||||||||||||||| Sbjct: 29172 atgaagtttttgttaaatat 29191
>gb|AC172372.2| Pan troglodytes BAC clone CH251-1067L6 from chromosome y, complete sequence Length = 192570 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 gaagctgcagtcccccctaatgct 310 ||||||||||||| |||||||||| Sbjct: 131012 gaagctgcagtcctccctaatgct 130989
>dbj|AK084608.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330021F09 product:unclassifiable, full insert sequence Length = 2377 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tatgaggcaaggcttgagga 117 |||||||||||||||||||| Sbjct: 2251 tatgaggcaaggcttgagga 2232
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gcaccatgtttgtaaagaaa 490 |||||||||||||||||||| Sbjct: 22051172 gcaccatgtttgtaaagaaa 22051153
>gb|AC007342.6| Homo sapiens chromosome 16 clone RP11-44F14, complete sequence Length = 177788 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 aaagcagtgcttagcatgaa 576 |||||||||||||||||||| Sbjct: 116620 aaagcagtgcttagcatgaa 116601
>gb|AC175060.2| Pan troglodytes BAC clone CH251-724O9 from chromosome y, complete sequence Length = 196548 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 gaagctgcagtcccccctaatgct 310 ||||||||||||| |||||||||| Sbjct: 145505 gaagctgcagtcctccctaatgct 145528
>gb|AC007345.5|AC007345 Homo sapiens chromosome 16 clone RP11-466N18, complete sequence Length = 188863 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 aaagcagtgcttagcatgaa 576 |||||||||||||||||||| Sbjct: 169403 aaagcagtgcttagcatgaa 169422
>gb|AC172373.3| Pan troglodytes BAC clone CH251-1081D19 from chromosome y, complete sequence Length = 194913 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 gaagctgcagtcccccctaatgct 310 ||||||||||||| |||||||||| Sbjct: 74976 gaagctgcagtcctccctaatgct 74953
>ref|XM_218816.3| PREDICTED: Rattus norvegicus mannosidase 2, alpha 2 (predicted) (Man2a2_predicted), mRNA Length = 4341 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ggtgtcctggaagacagtca 353 |||||||||||||||||||| Sbjct: 4086 ggtgtcctggaagacagtca 4067
>gb|AC163726.3| Pan troglodytes BAC clone CH251-653B19 from chromosome y, complete sequence Length = 207364 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 gaagctgcagtcccccctaatgct 310 ||||||||||||| |||||||||| Sbjct: 164386 gaagctgcagtcctccctaatgct 164409
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gcaccatgtttgtaaagaaa 490 |||||||||||||||||||| Sbjct: 93236 gcaccatgtttgtaaagaaa 93217
>gb|AC114598.9| Mus musculus chromosome 8, clone RP23-301G13, complete sequence Length = 211410 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 acttattgggaagttggatg 467 |||||||||||||||||||| Sbjct: 20521 acttattgggaagttggatg 20502
>gb|AC154619.2| Mus musculus BAC clone RP23-322I21 from 16, complete sequence Length = 191616 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 481 tgtaaagaaaggtcatgatggggaagag 508 ||||||||||||||| |||| ||||||| Sbjct: 18004 tgtaaagaaaggtcaagatgaggaagag 17977
>gb|AC175059.2| Pan troglodytes BAC clone CH251-777D16 from chromosome y, complete sequence Length = 166448 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 gaagctgcagtcccccctaatgct 310 ||||||||||||| |||||||||| Sbjct: 78058 gaagctgcagtcctccctaatgct 78035
>emb|AL731725.8| Mouse DNA sequence from clone RP23-146P19 on chromosome X, complete sequence Length = 213743 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 537 aggtgattgatgggcttgacaaag 560 ||||||||||||||| |||||||| Sbjct: 15223 aggtgattgatgggcatgacaaag 15246 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,165,997 Number of Sequences: 3902068 Number of extensions: 6165997 Number of successful extensions: 119132 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118817 Number of HSP's gapped (non-prelim): 310 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)