>BCHG_CHLAU (P33326) Bacteriochlorophyll synthase 34 kDa chain|
          Length = 310

 Score =  114 bits (284), Expect = 3e-25
 Identities = 70/209 (33%), Positives = 109/209 (52%)
 Frame = +3

Query: 3   PYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDFPIIFYLALGGSLLSYIYSA 182
           P+R IPSG +S    +  +++             ++ G    + F++ALG  + +  YS 
Sbjct: 99  PHRLIPSGQVS----LRHVYILTAVLTWIGASIALFLGRQ--VAFFVALG-LVFALAYSL 151

Query: 183 PPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTTLYSIAGLGIAIVNDFK 362
            P++ K+NGWIGN  +  SY GL W AG A F  LT + V +  LYS+   GI  VNDFK
Sbjct: 152 RPIRGKRNGWIGNALVAISYEGLAWMAGHAAFAPLTGESVTIALLYSLGAHGIMTVNDFK 211

Query: 363 SIEGDRTLGLQSLPVAFGMDTAKWICVGAIDITQLSVAAYLLSTGKLYYALALVGLTIPQ 542
           SI GD  +G++S+PV +G   A  + V  + + Q++V   L   G    A  +  L   Q
Sbjct: 212 SIRGDTIMGIRSIPVQYGKVMAARMVVTTMGVAQIAVIGLLFHWGHPVAATVVAILLAAQ 271

Query: 543 VILQFQYFLKDPVKYDVKYQASAQPFFVF 629
            I   + F++DP   +V + A+A   +V+
Sbjct: 272 SIPNAR-FIRDPENNEVFFNATAIMLYVW 299

>BCHG_RHOCA (P26170) Bacteriochlorophyll synthase 33 kDa chain (Geranylgeranyl|
           bacteriochlorophyll synthase)
          Length = 304

 Score = 96.7 bits (239), Expect = 5e-20
 Identities = 67/199 (33%), Positives = 97/199 (48%), Gaps = 7/199 (3%)
 Frame = +3

Query: 3   PYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDV-WAGHDFPIIFYLALGGSLLSYIYS 179
           P+RPIPSG I        +W              V W    +   F   L G   ++ YS
Sbjct: 85  PHRPIPSGRIPG------LWGLYIAIAMSLLSLVVGWQLGSWG--FVATLLGVAAAWAYS 136

Query: 180 APPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPD------IVVLTTLYSIAGLGI 341
             P++LK++GW G   +G +Y GLPW  G A+    T D      IV++ TLY++   GI
Sbjct: 137 VEPIRLKRSGWWGPGLVGLAYEGLPWITGAAVL-LATADTSPGFPIVMMATLYALGAHGI 195

Query: 342 AIVNDFKSIEGDRTLGLQSLPVAFGMDTAKWICVGAIDITQLSVAAYLLSTGKLYYALAL 521
             +NDFK+IEGDR LG++SLP  +G + A  I    + + Q  V   L    K Y+A A+
Sbjct: 196 MTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIACTVMGLAQALVITMLYLFSKPYHATAV 255

Query: 522 VGLTIPQVILQFQYFLKDP 578
           + L   Q       +++DP
Sbjct: 256 LVLLCGQ-FWAMSVWMRDP 273

>BCHG_RHOS4 (Q9Z5D6) Bacteriochlorophyll synthase 33 kDa chain (Geranylgeranyl|
           bacteriochlorophyll synthase)
          Length = 302

 Score = 93.2 bits (230), Expect = 6e-19
 Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 2/194 (1%)
 Frame = +3

Query: 3   PYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDFPIIFYLALGGSLLSYIYSA 182
           P RPIPSG I     +    +              W        F   + G L ++ YS 
Sbjct: 84  PDRPIPSGRIPGRWGLYIALLMTVLSLAVGWMLGPWG-------FGATVFGVLAAWAYSV 136

Query: 183 PPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTT--LYSIAGLGIAIVND 356
            P++LK++GW G   +   Y GLPW+ G A+     P   ++T   LY+    GI  +ND
Sbjct: 137 EPIRLKRSGWWGPGLVALCYEGLPWFTGAAVLSAGAPSFFIVTVALLYAFGAHGIMTLND 196

Query: 357 FKSIEGDRTLGLQSLPVAFGMDTAKWICVGAIDITQLSVAAYLLSTGKLYYALALVGLTI 536
           FK++EGDR  G++SLPV  G + A  +    + + Q+ V   L+  GK  +A  +  L +
Sbjct: 197 FKALEGDRQHGVRSLPVMLGPEVAAKLACTVMAMAQILVITLLVIWGKPIHAGIITALLV 256

Query: 537 PQVILQFQYFLKDP 578
            Q +   +  L+DP
Sbjct: 257 AQ-LFAMRVLLRDP 269

>Y279_METJA (Q57727) Hypothetical protein MJ0279|
          Length = 283

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 53/194 (27%), Positives = 84/194 (43%)
 Frame = +3

Query: 3   PYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDFPIIFYLALGGSLLSYIYSA 182
           P RP+PSG I  NE      +            +++A         +A+  +L  Y+Y+ 
Sbjct: 75  PSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYA-------LIIAVINALFLYLYAK 127

Query: 183 PPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTTLYSIAGLGIAIVNDFK 362
              K K    IGNF +G     +  + G A    +   I+ L +L SI G    IV DF+
Sbjct: 128 KYKKYKP---IGNFIIGYLTGSVFLFGGVAGKNVMPVVILFLCSLLSIWGR--EIVKDFE 182

Query: 363 SIEGDRTLGLQSLPVAFGMDTAKWICVGAIDITQLSVAAYLLSTGKLYYALALVGLTIPQ 542
            +EGD+  G+ SLP+ +G  +  +     +    LS   Y+L    ++Y L L+ +    
Sbjct: 183 DMEGDKKEGVISLPIKYGKKSLYFATFLVVLAVILSPLPYILKIFGIWY-LILIAICDIL 241

Query: 543 VILQFQYFLKDPVK 584
            I      LK+P K
Sbjct: 242 FIYAMALLLKEPNK 255

>ARNT_ERWCT (Q6D2F3) Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose|
           arabinosyl transferase (EC 2.-.-.-) (Undecaprenyl
           phosphate-alpha-L-Ara4N transferase)
           (4-amino-4-deoxy-L-arabinose lipid A transferase)
          Length = 556

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 8/169 (4%)
 Frame = +3

Query: 126 PIIFYLALGGSLLSYIYSA-PPLKLKQNGWIGNFA--LGASYIGLPWWAGQALFGTLTPD 296
           P++F+    G LL+YI     PL L    WI   A  +    + +  W      G L   
Sbjct: 305 PLLFFSIAKGKLLTYILPCFAPLALLMAAWISGLAPVVRERLLRINSWLNIVFGGVLGLA 364

Query: 297 IVVLTTLYSIAGLGIAIVNDFKSIEGDRTLGLQSLPVAFGMDTAKWICVGAIDITQLSVA 476
           +  L       GLGI + + ++  EG   L + S  V F      WI   A+ + +    
Sbjct: 365 VAAL-------GLGIIVPHFYQPGEG---LTIISGIVCF----IGWIAFAAVSLRKQQTW 410

Query: 477 AYLLSTGKLYYALALVGLTIPQVILQF---QYFLK--DPVKYDVKYQAS 608
            YL++   L+ AL LVG +IP  ++     Q F++   P+  D +Y  S
Sbjct: 411 GYLVAGCPLFLAL-LVGGSIPASVVDSKNPQTFIRSHQPLLEDSRYVLS 458

>FA13C_HUMAN (Q8NE31) Protein FAM13C1|
          Length = 585

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = -1

Query: 558 ETARSPGELSVQLVPRHNTACQCSGGRLQQIIE*CRLLQHISILQCPYQKQQEVTEVPEF 379
           E+A SP      ++PR ++ C C  G+  Q I   +L +HI  L+   +K +E  E  + 
Sbjct: 255 ESAPSPPSTQQFMMPRSSSRCSCGDGKEPQTI--TQLTKHIQSLKRKIRKFEEKFEQEKK 312

Query: 378 YPPQY 364
           Y P +
Sbjct: 313 YRPSH 317

>PFPB_RICCO (Q41141) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase|
           beta subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase,
           pyrophosphate-dependent) (Pyrophosphate-dependent
           6-phosphofructose-1-kinase) (PPi-PFK)
          Length = 552

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = +3

Query: 360 KSIEGDRTLGLQSLPVAFGMDTAKWICVGAIDITQLSVAAYLLSTGKLYYALALVGLTIP 539
           K+I+GD  L  + +P +FG DTA  I    I    +       STGK Y+ + L+G    
Sbjct: 211 KTIDGD--LKCKEVPTSFGFDTACKIYSEMIGNVMIDAR----STGKYYHFVRLMGRAAS 264

Query: 540 QVILQ 554
            + L+
Sbjct: 265 HITLE 269

>MRAY_THEFY (Q47QX2) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC|
           2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
          Length = 351

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = +3

Query: 120 DFPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDI 299
           D  ++   ALGG +    ++APP K+   G  G+ ALG   +GL       L   +   +
Sbjct: 225 DLAVVAAAALGGCIAFLWFNAPPAKIFM-GDTGSLALGGLLVGLAITTRTQLLLLVIGGL 283

Query: 300 VVLTTLYSIAGLG 338
            VL T   I  +G
Sbjct: 284 FVLITASVIIQVG 296

>SYV_ENTFA (Q82ZW6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 880

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 411 KQQEVTEVPEFYPPQYS*NHLRW 343
           K QE  +  EFYPP+++   LRW
Sbjct: 376 KNQETEDAVEFYPPRFNQTFLRW 398

>HAIR_HUMAN (O43593) Protein hairless|
          Length = 1189

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
 Frame = +2

Query: 455 HHSIICCSLPPEHWQAVLCLGTSWT----DNSPGDLAVSVLPEGPCEVRRQI 598
           HH  +C   P   W+ VL    SW        P D+   V  EGP    R++
Sbjct: 37  HHGPLCLGEPAPFWRGVLSTPDSWLPPGFPQGPKDMLPLVEGEGPQNGERKV 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,198,592
Number of Sequences: 219361
Number of extensions: 2100176
Number of successful extensions: 5296
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5290
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)