>gb|AC164574.15| Mus musculus 6 BAC RP23-446I7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 188358

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 376    gcattttatttaattccagac 396
              |||||||||||||||||||||
Sbjct: 180674 gcattttatttaattccagac 180654

>gb|AY176327.1| Staphylococcus phage K, complete genome
          Length = 127395

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 529    tgtaatttgccttccaaaattagtcatat 557
              ||||||||| |||||||||||| ||||||
Sbjct: 116643 tgtaatttgacttccaaaattattcatat 116615

>gb|AY954969.1| Bacteriophage G1, complete genome
          Length = 138715

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 529   tgtaatttgccttccaaaattagtcatat 557
             ||||||||| |||||||||||| ||||||
Sbjct: 88980 tgtaatttgacttccaaaattattcatat 88952

>gb|AC158671.3| Mus musculus 6 BAC RP23-62E15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 218969

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 376    gcattttatttaattccagac 396
              |||||||||||||||||||||
Sbjct: 207901 gcattttatttaattccagac 207921

>emb|BX005355.10| Zebrafish DNA sequence from clone CH211-222M2, complete sequence
          Length = 227182

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 215    ttcacctcttttacacattgtgatt 239
              ||||| |||||||||||||||||||
Sbjct: 201314 ttcacttcttttacacattgtgatt 201338

>gb|AC147681.8| Canis Familiaris, clone XX-10A1, complete sequence
          Length = 160031

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   ttctgtttaaacctaattat 470
             ||||||||||||||||||||
Sbjct: 90215 ttctgtttaaacctaattat 90196



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   ttctgtttaaacctaattat 576
             ||||||||||||||||||||
Sbjct: 90215 ttctgtttaaacctaattat 90196

>emb|Z78063.1|CEF45D3 Caenorhabditis elegans Cosmid F45D3, complete sequence
          Length = 37434

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 531   taatttgccttccaaaatta 550
             ||||||||||||||||||||
Sbjct: 17196 taatttgccttccaaaatta 17177



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 637   taatttgccttccaaaatta 656
             ||||||||||||||||||||
Sbjct: 17196 taatttgccttccaaaatta 17177

>emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, complete sequence
          Length = 174698

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 134  taatatgcaatgctactaacaaca 157
            ||||||||||||||| ||||||||
Sbjct: 5464 taatatgcaatgctaataacaaca 5487

>gb|AC079231.6| Homo sapiens BAC clone RP11-348A21 from 7, complete sequence
          Length = 87047

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 379  ttttatttaattccagactt 398
            ||||||||||||||||||||
Sbjct: 2882 ttttatttaattccagactt 2863

>emb|Z93021.2|HS516C23 Human DNA sequence from clone RP3-516C23 on chromosome 6q12 Contains
             the 5' end of the KHDRBS2 gene for KH domain containing
             RNA binding signal transduction associated protein 2,
             complete sequence
          Length = 116685

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   ttagtcatattctgtttaaa 567
             ||||||||||||||||||||
Sbjct: 53450 ttagtcatattctgtttaaa 53469

>emb|AL596322.3| Human DNA sequence from clone RP11-31D17 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 129044

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   gtatggcattttatttaatt 390
             ||||||||||||||||||||
Sbjct: 33287 gtatggcattttatttaatt 33306

>emb|AL031904.1|HS103M22 Human DNA sequence from clone RP1-103M22 on chromosome 6p24 Contains a
             CpG island, complete sequence
          Length = 140709

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   aaataactaagattcataaa 359
             ||||||||||||||||||||
Sbjct: 61924 aaataactaagattcataaa 61943

>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence
          Length = 485192

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tttatttaattccagacttc 399
            ||||||||||||||||||||
Sbjct: 5735 tttatttaattccagacttc 5716

>emb|CR790365.7| Zebrafish DNA sequence from clone DKEY-179K24 in linkage group 3,
             complete sequence
          Length = 161472

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    actgttgcagacttggctgg 110
             ||||||||||||||||||||
Sbjct: 31605 actgttgcagacttggctgg 31624

>gb|AC106047.5| Homo sapiens BAC clone RP11-293A21 from 4, complete sequence
          Length = 175918

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 340   aaataactaagattcataaatatg 363
             ||||||||| ||||||||||||||
Sbjct: 96265 aaataactatgattcataaatatg 96242

>gb|AC093425.2| Homo sapiens chromosome 1 clone RP11-470E16, complete sequence
          Length = 179499

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 371    gtatggcattttatttaatt 390
              ||||||||||||||||||||
Sbjct: 102227 gtatggcattttatttaatt 102246

>gb|AC093119.2| Homo sapiens chromosome 1 clone RP5-916A15, complete sequence
          Length = 124603

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   acacattgtgattttgaata 246
             ||||||||||||||||||||
Sbjct: 14463 acacattgtgattttgaata 14444

>gb|AC152504.2| Pan troglodytes BAC clone RP43-147M24 from chromosome 7, complete
             sequence
          Length = 178619

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 548   ttagtcatattctgtttaaa 567
             ||||||||||||||||||||
Sbjct: 28371 ttagtcatattctgtttaaa 28352

>gb|AC012489.8| Homo sapiens BAC clone RP11-93I3 from 2, complete sequence
          Length = 120776

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   tatggcattttatttaattc 391
             ||||||||||||||||||||
Sbjct: 68973 tatggcattttatttaattc 68992

>dbj|AK175060.1| Ciona intestinalis cDNA, clone:cixxx00111, full insert sequence
          Length = 1654

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 tcgttgttaagcttgatacg 305
           ||||||||||||||||||||
Sbjct: 406 tcgttgttaagcttgatacg 425

>dbj|AK174050.1| Ciona intestinalis cDNA, clone:ciad041g18, full insert sequence
          Length = 1654

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 tcgttgttaagcttgatacg 305
           ||||||||||||||||||||
Sbjct: 406 tcgttgttaagcttgatacg 425

>dbj|AK173351.1| Ciona intestinalis cDNA, clone:ciad064a04, full insert sequence
          Length = 2692

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 tcgttgttaagcttgatacg 305
           ||||||||||||||||||||
Sbjct: 403 tcgttgttaagcttgatacg 422

>emb|AL117355.5|CNS01DRL Human chromosome 14 DNA sequence BAC R-354E14 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174933

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    aatgttatttatctccacgt 325
              ||||||||||||||||||||
Sbjct: 165937 aatgttatttatctccacgt 165918

>emb|AL121852.3|CNS01DST Human chromosome 14 DNA sequence BAC R-159L20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167131

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    aatgttatttatctccacgt 325
              ||||||||||||||||||||
Sbjct: 136748 aatgttatttatctccacgt 136767


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,971,473
Number of Sequences: 3902068
Number of extensions: 5971473
Number of successful extensions: 110455
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110387
Number of HSP's gapped (non-prelim): 68
length of query: 658
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 635
effective length of database: 17,143,297,704
effective search space: 10885994042040
effective search space used: 10885994042040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)