| Clone Name | bags25o02 |
|---|---|
| Clone Library Name | barley_pub |
>JI23_HORVU (P32024) 23 kDa jasmonate-induced protein| Length = 210 Score = 323 bits (828), Expect = 2e-88 Identities = 150/177 (84%), Positives = 155/177 (87%) Frame = +2 Query: 2 MASGVFGTPISEKTVIATGEYKEPITQKDVADYAMKMINAGGKDINALTFVDNLKERYGN 181 MASGVFGTPIS +TVIATGEYKEPITQKDVADYAMKMINAGGKD+NA FVDNLKERYGN Sbjct: 1 MASGVFGTPISAQTVIATGEYKEPITQKDVADYAMKMINAGGKDVNAQKFVDNLKERYGN 60 Query: 182 GIAVKCLIYNATGATLSLAKYNDWHGHIYDTPYPSDIQNGQWGAFLHVHPXXXXXXXXXX 361 GIAVKCL+YNATGATL+ AKYNDWHGHIYDTPYPSDIQNGQWGAFLHVHP Sbjct: 61 GIAVKCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQWGAFLHVHPSGAAAGSAGA 120 Query: 362 XXYRTKIPSSSRSCDWLFSWTAPYIGDNGVYTEIREEGHYPSVGSWGYIYGVKLANS 532 YR+KIPSSS SCDWLFSWT PYIG NGVYTEIREEGHYPSVGSW YIY VKL NS Sbjct: 121 VVYRSKIPSSSSSCDWLFSWTVPYIGGNGVYTEIREEGHYPSVGSWDYIYNVKLKNS 177
>JIPH_ATRCA (P42764) Jasmonate-induced protein homolog| Length = 185 Score = 35.8 bits (81), Expect = 0.076 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 4/104 (3%) Frame = +2 Query: 209 NATGATLSLAKYNDWHGHIYDTPYPSDIQNGQWGAFLHVHPXXXXXXXXXXXXYRTKIPS 388 N T +++ + ++W G + T YP I Q F+H Y + + Sbjct: 43 NQTNVSMTFNENHNWSGSVVGTGYPKSIPTKQSRQFIH-QGDAKDGSQGAVVYYGSN--A 99 Query: 389 SSRSCDWLFSWTAPY----IGDNGVYTEIREEGHYPSVGSWGYI 508 + C WL +W AP N VY + + + ++ SW I Sbjct: 100 NGEPCGWLLAWCAPTNVTPTKPNRVYVDCGAQSKFDTI-SWDTI 142
>TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (TIF1-gamma)| (RET-fused gene 7 protein) (Rfg7 protein) (Tripartite motif protein 33) Length = 1127 Score = 31.6 bits (70), Expect = 1.4 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +3 Query: 375 PRSPPAAGPAIGCSPGPPPTLVTT 446 P S PA GP+ G PGPP +L+ T Sbjct: 101 PASAPAPGPSAGPPPGPPASLLDT 124
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 31.2 bits (69), Expect = 1.9 Identities = 28/134 (20%), Positives = 49/134 (36%) Frame = +3 Query: 114 STPVVRILTH*PSSTISKSGTVTE*L*NASSTMPLVPL*AWLSTTIGTAISMIHPTHQIF 293 +T ++ T P+ST S + T T +SST V + + STT T S + T Sbjct: 181 TTTSTKLSTSIPTSTTSSTSTTTS---TSSSTSTTVSVTSSTSTTTSTTSSTLISTSTSS 237 Query: 294 RMGNGVHSSTSTXXXXXXXXXXXXCIVPRSPPAAGPAIGCSPGPPPTLVTTGCTPKSVRK 473 + +++S SP ++ S P + T +P + Sbjct: 238 SSSSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTPTSTTFTTTSPSTAPS 297 Query: 474 DTTQVWEAGVISMV 515 TT + + S + Sbjct: 298 STTVTYTSTTASPI 311
>Y996_METJA (Q58403) Hypothetical protein MJ0996| Length = 451 Score = 29.6 bits (65), Expect = 5.5 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Frame = +2 Query: 86 DVADYAMKMINAGGKDINALTF----VDNLKERYGNGIAVKCLIYNATGATLS 232 +V DYA IN G + N +T ++ + +GNG+AV+ L N G S Sbjct: 12 EVGDYADIRINFG--ESNTITLKDGKIEEISSGFGNGVAVRVLYKNGWGFVTS 62
>POT22_HUMAN (Q6S545) Prostate, ovary, testis expressed protein on chromosome 22| Length = 288 Score = 29.3 bits (64), Expect = 7.2 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +1 Query: 289 YSEWAMGCIPPRPPKWCCGWFSWCR 363 + + AM + + KWCC F WCR Sbjct: 49 HDDSAMKTLRSKMGKWCCHCFPWCR 73
>PRSA_BACHD (Q9KDN4) Foldase protein prsA precursor (EC 5.2.1.8)| Length = 333 Score = 29.3 bits (64), Expect = 7.2 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +2 Query: 86 DVADYAMKMINAGGKDINALTFVDNLKERYGNGI 187 D ++ G +I+ FVD LKERYG I Sbjct: 24 DAGSSGQAVVEVDGHEISDAEFVDMLKERYGEAI 57
>ACTY_DROME (P45891) Actin-like protein 53D| Length = 376 Score = 28.9 bits (63), Expect = 9.3 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = -3 Query: 262 MAVPIVVLSQAQSGTSGIVDEAFYSYSVTVPLFE-IVDEG*CVNILTTGVDHLHGIVCNI 86 +AV V+ A T GIV ++ + TVP++E CV + G D L +C + Sbjct: 139 VAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRD-LTDYLCKL 197 Query: 85 LLSNGFLILTSGYHRLLR 32 LL G + TS ++R Sbjct: 198 LLERGVTMGTSAEREIVR 215
>PPCK_CORGL (Q9AEM1) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 610 Score = 28.9 bits (63), Expect = 9.3 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +2 Query: 419 WTAPYIGDNGVYTEIREEGHY---PSVGSWGYIYGVKLANS 532 WTA +GD+ + ++RE+G Y P G +G G A++ Sbjct: 289 WTAQVVGDDIAWLKLREDGLYAVNPENGFFGVAPGTNYASN 329
>TRPA_CLOAB (Q97EF6) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 263 Score = 28.9 bits (63), Expect = 9.3 Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Frame = -3 Query: 409 PIAGPAAGGDL------GTIHNGTS*TNRSTTWVDVEECTPLPILNI*WVGCIIDMAVPI 248 P + P A G + G ++NG + +V + +PI+ + + GC+ + Sbjct: 54 PYSDPVADGPIIQISSSGALNNGLKIKDIMNMVKEVRKNVKIPIVYMGYFGCVFKYGLEK 113 Query: 247 VVLSQAQSGTSGIV 206 + +SG GIV Sbjct: 114 FIKDSKESGVDGIV 127
>FXL16_RAT (Q5MJ12) F-box/LRR-repeat protein 16 (F-box and leucine-rich repeat| protein 16) (Spinal cord injury and regeneration-related protein 1) Length = 479 Score = 28.9 bits (63), Expect = 9.3 Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 3/23 (13%) Frame = +3 Query: 384 PPAAGPAIGCSPGPP---PTLVT 443 PPA+GPA G PGPP P L T Sbjct: 75 PPASGPASGPVPGPPVERPPLAT 97
>ASO_TOBAC (Q40588) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase)| (ASO) Length = 578 Score = 28.9 bits (63), Expect = 9.3 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Frame = +2 Query: 128 KDINALTFVDNLKERYGNGI-------AVKCLIYNATGATLSLAKYNDWHGHIYD 271 KD + L N YGNG+ + ++ NA +++ + WH H +D Sbjct: 426 KDYDVLKQAPNSNSTYGNGVYMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHD 480 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,072,067 Number of Sequences: 219361 Number of extensions: 1906214 Number of successful extensions: 7826 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 6929 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7778 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)