ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26d01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193807.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3369 Score = 587 bits (296), Expect = e-164 Identities = 422/464 (90%) Strand = Plus / Plus Query: 26 tattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcattt 85 |||||||| |||||||||| ||| |||||||| |||||||| ||||||||||| || || Sbjct: 1723 tattgccggatagatggaaatactggtggagaagatcgtgatgcatccattgaagctttc 1782 Query: 86 aacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttggt 145 ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 1783 aacaaaccaggcagtgaaaagtttgtttttttgctttcaaccagggctggtggccttggc 1842 Query: 146 atcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagct 205 ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1843 atcaaccttgctactgctgatgttgtggttctttatgatagtgattggaatccacaagct 1902 Query: 206 gatcttcaagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagttttc 265 ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 1903 gatctgcaagctcaagaccgtgcacataggataggtcagaagaaagaagttcaagttttc 1962 Query: 266 cgattttgcaccgagtataccattgaggaaaaagtgattgagagagcgtacaagaagctt 325 ||||||||||| ||||||||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 1963 cgattttgcactgagtataccatcgaggagaaagtgattgagagggcatacaagaagctt 2022 Query: 326 gcattggatgctttggttattcaacaaggacgattgtcagggcagaaaactgtcaataag 385 ||||||||||||||||| ||||||||||| ||| || ||| |||||| |||||||||||| Sbjct: 2023 gcattggatgctttggtcattcaacaaggccgactggcagagcagaagactgtcaataag 2082 Query: 386 gatgacttattgcaaatggttagatttggtgcggaaatggtgttcagttcgaaggatagc 445 ||||| | ||||||||||| |||||||||||||||||||| |||||||| ||||| ||| Sbjct: 2083 gatgatctgttgcaaatggtaagatttggtgcggaaatggtattcagttccaaggacagc 2142 Query: 446 acaataacagatgaggatgttgacagaattatagctaaaggaga 489 ||||| |||||||||||| ||||| | || |||||||||||||| Sbjct: 2143 acaattacagatgaggatattgaccgtatcatagctaaaggaga 2186 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 527 ttcacagaggatgccattaagtttaaaatggatgacactgctgaattgtatgattttgat 586 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 2224 ttcacagaggatgctattaaatttaaaatggatgacactgcggaattgtatgattttgat 2283 Query: 587 ggtgataag 595 | ||||||| Sbjct: 2284 gatgataag 2292
>dbj|AK105265.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D05, full insert sequence Length = 3749 Score = 587 bits (296), Expect = e-164 Identities = 422/464 (90%) Strand = Plus / Plus Query: 26 tattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcattt 85 |||||||| |||||||||| ||| |||||||| |||||||| ||||||||||| || || Sbjct: 1815 tattgccggatagatggaaatactggtggagaagatcgtgatgcatccattgaagctttc 1874 Query: 86 aacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttggt 145 ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 1875 aacaaaccaggcagtgaaaagtttgtttttttgctttcaaccagggctggtggccttggc 1934 Query: 146 atcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagct 205 ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1935 atcaaccttgctactgctgatgttgtggttctttatgatagtgattggaatccacaagct 1994 Query: 206 gatcttcaagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagttttc 265 ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 1995 gatctgcaagctcaagaccgtgcacataggataggtcagaagaaagaagttcaagttttc 2054 Query: 266 cgattttgcaccgagtataccattgaggaaaaagtgattgagagagcgtacaagaagctt 325 ||||||||||| ||||||||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 2055 cgattttgcactgagtataccatcgaggagaaagtgattgagagggcatacaagaagctt 2114 Query: 326 gcattggatgctttggttattcaacaaggacgattgtcagggcagaaaactgtcaataag 385 ||||||||||||||||| ||||||||||| ||| || ||| |||||| |||||||||||| Sbjct: 2115 gcattggatgctttggtcattcaacaaggccgactggcagagcagaagactgtcaataag 2174 Query: 386 gatgacttattgcaaatggttagatttggtgcggaaatggtgttcagttcgaaggatagc 445 ||||| | ||||||||||| |||||||||||||||||||| |||||||| ||||| ||| Sbjct: 2175 gatgatctgttgcaaatggtaagatttggtgcggaaatggtattcagttccaaggacagc 2234 Query: 446 acaataacagatgaggatgttgacagaattatagctaaaggaga 489 ||||| |||||||||||| ||||| | || |||||||||||||| Sbjct: 2235 acaattacagatgaggatattgaccgtatcatagctaaaggaga 2278 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Plus Query: 527 ttcacagaggatgccattaagtttaaaatggatgacactgctgaattgtatgattttgat 586 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 2316 ttcacagaggatgctattaaatttaaaatggatgacactgcggaattgtatgattttgat 2375 Query: 587 ggtgataaggaggaagacaa 606 | ||||||||||||| |||| Sbjct: 2376 gatgataaggaggaaaacaa 2395
>ref|XM_493917.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3414 Score = 396 bits (200), Expect = e-107 Identities = 401/468 (85%) Strand = Plus / Plus Query: 25 atattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcatt 84 |||||||||||| ||||| | ||| ||||| || |||||||| || || ||||| || || Sbjct: 1761 atattgccgaattgatgggaatactggtggtgaagatcgtgatgcttcgattgaagcttt 1820 Query: 85 taacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttgg 144 ||||| ||||| ||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 1821 caacaagccagggagtgaaaaatttgttttcttgctttcgactagggcaggtggtcttgg 1880 Query: 145 tatcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagc 204 || || ||||| |||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 1881 gataaatcttgctactgctgatgttgttattctttatgacagtgactggaatcctcaagt 1940 Query: 205 tgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagtttt 264 ||||| ||||| ||||| ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 1941 ggatctgcaagcgcaagatcgtgcacatagaattggtcaaaagaaagaagttcaagtttt 2000 Query: 265 ccgattttgcaccgagtataccattgaggaaaaagtgattgagagagcgtacaagaagct 324 || || ||||| |||||||| ||||||||||| |||||||||||||| || |||||||| Sbjct: 2001 tcgtttctgcactgagtatacaattgaggaaaaggtgattgagagagcttataagaagct 2060 Query: 325 tgcattggatgctttggttattcaacaaggacgattgtcagggcagaaaactgtcaataa 384 ||| ||||||||||||| || ||||| || |||||| ||| ||||||| |||||||||| Sbjct: 2061 tgccctggatgctttggtcatacaacagggtcgattggcagagcagaaagctgtcaataa 2120 Query: 385 ggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagttcgaaggatag 444 |||||| ||||||| ||||| ||||||||||| |||||||| ||||| || |||||||| Sbjct: 2121 ggatgagctattgcagatggtcagatttggtgctgaaatggtattcagctccaaggatag 2180 Query: 445 cacaataacagatgaggatgttgacagaattatagctaaaggagaaga 492 ||||||||||||||| ||| ||||| | || || ||||| |||||||| Sbjct: 2181 cacaataacagatgaagatattgaccgcatcatcgctaagggagaaga 2228 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 527 ttcacagaggatgccattaagtttaaaatggatgacactgctgaattgtatgattttgat 586 |||||||| ||||| |||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 2263 ttcacagaagatgctattaagttcaaaatggatgacactgctgaactgtatgattttgat 2322 Query: 587 ggtgataag 595 | ||||||| Sbjct: 2323 gatgataag 2331
>dbj|AK100732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117L05, full insert sequence Length = 4000 Score = 396 bits (200), Expect = e-107 Identities = 401/468 (85%) Strand = Plus / Plus Query: 25 atattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcatt 84 |||||||||||| ||||| | ||| ||||| || |||||||| || || ||||| || || Sbjct: 2096 atattgccgaattgatgggaatactggtggtgaagatcgtgatgcttcgattgaagcttt 2155 Query: 85 taacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttgg 144 ||||| ||||| ||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 2156 caacaagccagggagtgaaaaatttgttttcttgctttcgactagggcaggtggtcttgg 2215 Query: 145 tatcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagc 204 || || ||||| |||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 2216 gataaatcttgctactgctgatgttgttattctttatgacagtgactggaatcctcaagt 2275 Query: 205 tgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagtttt 264 ||||| ||||| ||||| ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 2276 ggatctgcaagcgcaagatcgtgcacatagaattggtcaaaagaaagaagttcaagtttt 2335 Query: 265 ccgattttgcaccgagtataccattgaggaaaaagtgattgagagagcgtacaagaagct 324 || || ||||| |||||||| ||||||||||| |||||||||||||| || |||||||| Sbjct: 2336 tcgtttctgcactgagtatacaattgaggaaaaggtgattgagagagcttataagaagct 2395 Query: 325 tgcattggatgctttggttattcaacaaggacgattgtcagggcagaaaactgtcaataa 384 ||| ||||||||||||| || ||||| || |||||| ||| ||||||| |||||||||| Sbjct: 2396 tgccctggatgctttggtcatacaacagggtcgattggcagagcagaaagctgtcaataa 2455 Query: 385 ggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagttcgaaggatag 444 |||||| ||||||| ||||| ||||||||||| |||||||| ||||| || |||||||| Sbjct: 2456 ggatgagctattgcagatggtcagatttggtgctgaaatggtattcagctccaaggatag 2515 Query: 445 cacaataacagatgaggatgttgacagaattatagctaaaggagaaga 492 ||||||||||||||| ||| ||||| | || || ||||| |||||||| Sbjct: 2516 cacaataacagatgaagatattgaccgcatcatcgctaagggagaaga 2563 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 527 ttcacagaggatgccattaagtttaaaatggatgacactgctgaattgtatgattttgat 586 |||||||| ||||| |||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 2598 ttcacagaagatgctattaagttcaaaatggatgacactgctgaactgtatgattttgat 2657 Query: 587 ggtgataaggaggaagacaa 606 | ||||||||| ||| |||| Sbjct: 2658 gatgataaggatgaaaacaa 2677
>ref|NM_121867.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ DNA binding / DNA-dependent ATPase/ helicase/ nucleic acid binding AT5G18620 transcript variant AT5G18620.1 mRNA, complete cds Length = 3576 Score = 311 bits (157), Expect = 1e-81 Identities = 346/409 (84%) Strand = Plus / Plus Query: 85 taacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttgg 144 |||||| |||||||||||||| || ||||||||| | || || || ||||| |||||||| Sbjct: 1779 taacaagccaggaagtgagaaattcgttttcttgttatccactagagctggaggacttgg 1838 Query: 145 tatcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagc 204 |||||| ||||| ||||| ||||||||||| || ||||||||||||||||| || |||| Sbjct: 1839 tatcaatcttgctactgcagatgttgtgatcctctatgatagtgactggaaccctcaagt 1898 Query: 205 tgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagtttt 264 ||| | |||||||| || |||||||||||||| |||||||| |||||||| ||||| || Sbjct: 1899 tgacttgcaagctcaggatcgtgcacataggattggtcaaaaaaaagaagttcaagtgtt 1958 Query: 265 ccgattttgcaccgagtataccattgaggaaaaagtgattgagagagcgtacaagaagct 324 ||| || ||||||||| || | ||||||| ||||| ||||||||||| ||||||||| | Sbjct: 1959 ccggttctgcaccgagaatgctattgaggctaaagtcattgagagagcttacaagaagtt 2018 Query: 325 tgcattggatgctttggttattcaacaaggacgattgtcagggcagaaaactgtcaataa 384 ||| | |||||| |||||||||| ||||| ||||| ||| ||||||||||| ||||| Sbjct: 2019 ggcacttgatgctctggttattcagcaagggagattggcagaacagaaaactgttaataa 2078 Query: 385 ggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagttcgaaggatag 444 |||||| || | |||||||| |||| |||||| ||||||||||| ||||| || ||||| Sbjct: 2079 ggatgagttgcttcaaatggtgagatatggtgctgaaatggtgtttagttctaaagatag 2138 Query: 445 cacaataacagatgaggatgttgacagaattatagctaaaggagaagag 493 |||||| || ||||||||| |||||||||| || || |||||||||||| Sbjct: 2139 cacaattacggatgaggatattgacagaatcattgccaaaggagaagag 2187 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 546 agtttaaaatggatgacactgctgaattgtatgattttga 585 |||||||||||||||||| |||||| || ||||||||||| Sbjct: 2240 agtttaaaatggatgacagtgctgacttttatgattttga 2279
>ref|NM_180516.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ DNA binding / DNA-dependent ATPase/ helicase/ nucleic acid binding AT5G18620 transcript variant AT5G18620.2 mRNA, complete cds Length = 3600 Score = 311 bits (157), Expect = 1e-81 Identities = 346/409 (84%) Strand = Plus / Plus Query: 85 taacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttgg 144 |||||| |||||||||||||| || ||||||||| | || || || ||||| |||||||| Sbjct: 1779 taacaagccaggaagtgagaaattcgttttcttgttatccactagagctggaggacttgg 1838 Query: 145 tatcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagc 204 |||||| ||||| ||||| ||||||||||| || ||||||||||||||||| || |||| Sbjct: 1839 tatcaatcttgctactgcagatgttgtgatcctctatgatagtgactggaaccctcaagt 1898 Query: 205 tgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagtttt 264 ||| | |||||||| || |||||||||||||| |||||||| |||||||| ||||| || Sbjct: 1899 tgacttgcaagctcaggatcgtgcacataggattggtcaaaaaaaagaagttcaagtgtt 1958 Query: 265 ccgattttgcaccgagtataccattgaggaaaaagtgattgagagagcgtacaagaagct 324 ||| || ||||||||| || | ||||||| ||||| ||||||||||| ||||||||| | Sbjct: 1959 ccggttctgcaccgagaatgctattgaggctaaagtcattgagagagcttacaagaagtt 2018 Query: 325 tgcattggatgctttggttattcaacaaggacgattgtcagggcagaaaactgtcaataa 384 ||| | |||||| |||||||||| ||||| ||||| ||| ||||||||||| ||||| Sbjct: 2019 ggcacttgatgctctggttattcagcaagggagattggcagaacagaaaactgttaataa 2078 Query: 385 ggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagttcgaaggatag 444 |||||| || | |||||||| |||| |||||| ||||||||||| ||||| || ||||| Sbjct: 2079 ggatgagttgcttcaaatggtgagatatggtgctgaaatggtgtttagttctaaagatag 2138 Query: 445 cacaataacagatgaggatgttgacagaattatagctaaaggagaagag 493 |||||| || ||||||||| |||||||||| || || |||||||||||| Sbjct: 2139 cacaattacggatgaggatattgacagaatcattgccaaaggagaagag 2187 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 546 agtttaaaatggatgacactgctgaattgtatgattttga 585 |||||||||||||||||| |||||| || ||||||||||| Sbjct: 2240 agtttaaaatggatgacagtgctgacttttatgattttga 2279
>gb|AY056162.2| Arabidopsis thaliana At5g18620 mRNA sequence Length = 2364 Score = 311 bits (157), Expect = 1e-81 Identities = 346/409 (84%) Strand = Plus / Plus Query: 85 taacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttgg 144 |||||| |||||||||||||| || ||||||||| | || || || ||||| |||||||| Sbjct: 1779 taacaagccaggaagtgagaaattcgttttcttgttatccactagagctggaggacttgg 1838 Query: 145 tatcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagc 204 |||||| ||||| ||||| ||||||||||| || ||||||||||||||||| || |||| Sbjct: 1839 tatcaatcttgctactgcagatgttgtgatcctctatgatagtgactggaaccctcaagt 1898 Query: 205 tgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagtttt 264 ||| | |||||||| || |||||||||||||| |||||||| |||||||| ||||| || Sbjct: 1899 tgacttgcaagctcaggatcgtgcacataggattggtcaaaaaaaagaagttcaagtgtt 1958 Query: 265 ccgattttgcaccgagtataccattgaggaaaaagtgattgagagagcgtacaagaagct 324 ||| || ||||||||| || | ||||||| ||||| ||||||||||| ||||||||| | Sbjct: 1959 ccggttctgcaccgagaatgctattgaggctaaagtcattgagagagcttacaagaagtt 2018 Query: 325 tgcattggatgctttggttattcaacaaggacgattgtcagggcagaaaactgtcaataa 384 ||| | |||||| |||||||||| ||||| ||||| ||| ||||||||||| ||||| Sbjct: 2019 ggcacttgatgctctggttattcagcaagggagattggcagaacagaaaactgttaataa 2078 Query: 385 ggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagttcgaaggatag 444 |||||| || | |||||||| |||| |||||| ||||||||||| ||||| || ||||| Sbjct: 2079 ggatgagttgcttcaaatggtgagatatggtgctgaaatggtgtttagttctaaagatag 2138 Query: 445 cacaataacagatgaggatgttgacagaattatagctaaaggagaagag 493 |||||| || ||||||||| |||||||||| || || |||||||||||| Sbjct: 2139 cacaattacggatgaggatattgacagaatcattgccaaaggagaagag 2187 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 546 agtttaaaatggatgacactgctgaattgtatgattttga 585 |||||||||||||||||| |||||| || ||||||||||| Sbjct: 2240 agtttaaaatggatgacagtgctgacttttatgattttga 2279
>gb|AY035159.1| Arabidopsis thaliana putative chromatin remodelling complex ATPase chain ISWI (At5g18620) mRNA, complete cds Length = 1886 Score = 311 bits (157), Expect = 1e-81 Identities = 346/409 (84%) Strand = Plus / Plus Query: 85 taacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttgg 144 |||||| |||||||||||||| || ||||||||| | || || || ||||| |||||||| Sbjct: 87 taacaagccaggaagtgagaaattcgttttcttgttatccactagagctggaggacttgg 146 Query: 145 tatcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagc 204 |||||| ||||| ||||| ||||||||||| || ||||||||||||||||| || |||| Sbjct: 147 tatcaatcttgctactgcagatgttgtgatcctctatgatagtgactggaaccctcaagt 206 Query: 205 tgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagtttt 264 ||| | |||||||| || |||||||||||||| |||||||| |||||||| ||||| || Sbjct: 207 tgacttgcaagctcaggatcgtgcacataggattggtcaaaaaaaagaagttcaagtgtt 266 Query: 265 ccgattttgcaccgagtataccattgaggaaaaagtgattgagagagcgtacaagaagct 324 ||| || ||||||||| || | ||||||| ||||| ||||||||||| ||||||||| | Sbjct: 267 ccggttctgcaccgagaatgctattgaggctaaagtcattgagagagcttacaagaagtt 326 Query: 325 tgcattggatgctttggttattcaacaaggacgattgtcagggcagaaaactgtcaataa 384 ||| | |||||| |||||||||| ||||| ||||| ||| ||||||||||| ||||| Sbjct: 327 ggcacttgatgctctggttattcagcaagggagattggcagaacagaaaactgttaataa 386 Query: 385 ggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagttcgaaggatag 444 |||||| || | |||||||| |||| |||||| ||||||||||| ||||| || ||||| Sbjct: 387 ggatgagttgcttcaaatggtgagatatggtgctgaaatggtgtttagttctaaagatag 446 Query: 445 cacaataacagatgaggatgttgacagaattatagctaaaggagaagag 493 |||||| || ||||||||| |||||||||| || || |||||||||||| Sbjct: 447 cacaattacggatgaggatattgacagaatcattgccaaaggagaagag 495 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 546 agtttaaaatggatgacactgctgaattgtatgattttga 585 |||||||||||||||||| |||||| || ||||||||||| Sbjct: 548 agtttaaaatggatgacagtgctgacttttatgattttga 587
>ref|NM_111515.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ DNA binding / DNA-dependent ATPase/ helicase/ nucleic acid binding AT3G06400 mRNA, complete cds Length = 3457 Score = 301 bits (152), Expect = 1e-78 Identities = 344/408 (84%) Strand = Plus / Plus Query: 86 aacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttggt 145 ||||| |||||||||||||| |||||||||||| | || || || ||||| || |||||| Sbjct: 1722 aacaagccaggaagtgagaaatttgttttcttgttatctactagagctggagggcttggt 1781 Query: 146 atcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagct 205 ||||| ||||| ||||| ||||||||||| ||||| |||||||| ||||| ||||||| Sbjct: 1782 atcaatcttgctactgcagatgttgtgatcctttacgatagtgattggaacccacaagtc 1841 Query: 206 gatcttcaagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagttttc 265 || | |||||||| || ||||| |||||||| |||||||| |||||||| ||||| || Sbjct: 1842 gacttgcaagctcaggatcgtgcccataggattggtcaaaaaaaagaagttcaagtgttt 1901 Query: 266 cgattttgcaccgagtataccattgaggaaaaagtgattgagagagcgtacaagaagctt 325 ||||| ||||| |||| | | |||||||| ||||||||||| ||||| ||||||||| | Sbjct: 1902 cgattctgcactgagtctgctattgaggagaaagtgattgaaagagcttacaagaagtta 1961 Query: 326 gcattggatgctttggttattcaacaaggacgattgtcagggcagaaaactgtcaataag 385 ||| | |||||| |||||||||||||||| ||||| ||| |||||||||||||||||| Sbjct: 1962 gcacttgatgctctggttattcaacaagggagattggcagaacagaaaactgtcaataag 2021 Query: 386 gatgacttattgcaaatggttagatttggtgcggaaatggtgttcagttcgaaggatagc 445 ||||| || | |||||||| |||| |||||| || |||||||||||||| || |||||| Sbjct: 2022 gatgagttgcttcaaatggtaagatatggtgctgagatggtgttcagttctaaagatagc 2081 Query: 446 acaataacagatgaggatgttgacagaattatagctaaaggagaagag 493 ||||| ||||| |||||| |||| ||||| || || |||||||||||| Sbjct: 2082 acaatcacagacgaggatattgatagaatcattgccaaaggagaagag 2129 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 527 ttcacagaggatgccattaagtttaaaatggatgacactgctgaattgtatgattttgat 586 |||||||| ||||| || |||||||||||||||||| |||||| || |||||||||||| Sbjct: 2163 ttcacagaagatgctatacagtttaaaatggatgacagtgctgacttctatgattttgat 2222 Query: 587 g 587 | Sbjct: 2223 g 2223
>gb|AY091030.1| Arabidopsis thaliana putative ATPase (ISW2) (At3g06400) mRNA, complete cds Length = 3394 Score = 301 bits (152), Expect = 1e-78 Identities = 344/408 (84%) Strand = Plus / Plus Query: 86 aacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttggt 145 ||||| |||||||||||||| |||||||||||| | || || || ||||| || |||||| Sbjct: 1722 aacaagccaggaagtgagaaatttgttttcttgttatctactagagctggagggcttggt 1781 Query: 146 atcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagct 205 ||||| ||||| ||||| ||||||||||| ||||| |||||||| ||||| ||||||| Sbjct: 1782 atcaatcttgctactgcagatgttgtgatcctttacgatagtgattggaacccacaagtc 1841 Query: 206 gatcttcaagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagttttc 265 || | |||||||| || ||||| |||||||| |||||||| |||||||| ||||| || Sbjct: 1842 gacttgcaagctcaggatcgtgcccataggattggtcaaaaaaaagaagttcaagtgttt 1901 Query: 266 cgattttgcaccgagtataccattgaggaaaaagtgattgagagagcgtacaagaagctt 325 ||||| ||||| |||| | | |||||||| ||||||||||| ||||| ||||||||| | Sbjct: 1902 cgattctgcactgagtctgctattgaggagaaagtgattgaaagagcttacaagaagtta 1961 Query: 326 gcattggatgctttggttattcaacaaggacgattgtcagggcagaaaactgtcaataag 385 ||| | |||||| |||||||||||||||| ||||| ||| |||||||||||||||||| Sbjct: 1962 gcacttgatgctctggttattcaacaagggagattggcagaacagaaaactgtcaataag 2021 Query: 386 gatgacttattgcaaatggttagatttggtgcggaaatggtgttcagttcgaaggatagc 445 ||||| || | |||||||| |||| |||||| || |||||||||||||| || |||||| Sbjct: 2022 gatgagttgcttcaaatggtaagatatggtgctgagatggtgttcagttctaaagatagc 2081 Query: 446 acaataacagatgaggatgttgacagaattatagctaaaggagaagag 493 ||||| ||||| |||||| |||| ||||| || || |||||||||||| Sbjct: 2082 acaatcacagacgaggatattgatagaatcattgccaaaggagaagag 2129 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 527 ttcacagaggatgccattaagtttaaaatggatgacactgctgaattgtatgattttgat 586 |||||||| ||||| || |||||||||||||||||| |||||| || |||||||||||| Sbjct: 2163 ttcacagaagatgctatacagtttaaaatggatgacagtgctgacttctatgattttgat 2222 Query: 587 g 587 | Sbjct: 2223 g 2223
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 206 bits (104), Expect = 6e-50 Identities = 149/164 (90%) Strand = Plus / Minus Query: 26 tattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcattt 85 |||||||| |||||||||| ||| |||||||| |||||||| ||||||||||| || || Sbjct: 77716 tattgccggatagatggaaatactggtggagaagatcgtgatgcatccattgaagctttc 77657 Query: 86 aacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttggt 145 ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 77656 aacaaaccaggcagtgaaaagtttgtttttttgctttcaaccagggctggtggccttggc 77597 Query: 146 atcaaccttgccactgctgatgttgtgattctttatgatagtga 189 ||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 77596 atcaaccttgctactgctgatgttgtggttctttatgatagtga 77553 Score = 145 bits (73), Expect = 2e-31 Identities = 82/85 (96%) Strand = Plus / Minus Query: 192 ggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaag 251 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 77465 ggaatccacaagctgatctgcaagctcaagaccgtgcacataggataggtcagaagaaag 77406 Query: 252 aagtccaagttttccgattttgcac 276 |||| |||||||||||||||||||| Sbjct: 77405 aagttcaagttttccgattttgcac 77381 Score = 133 bits (67), Expect = 8e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 77116 ctgtcaataaggatgatctgttgcaaatggtaagatttggtgcggaaatggtattcagtt 77057 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggaga 489 | ||||| |||||||| |||||||||||| ||||| | || |||||||||||||| Sbjct: 77056 ccaaggacagcacaattacagatgaggatattgaccgtatcatagctaaaggaga 77002 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 279 agtataccattgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctt 338 |||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 77295 agtataccatcgaggagaaagtgattgagagggcatacaagaagcttgcattggatgctt 77236 Query: 339 tggttattcaacaaggacgattgtcagggcagaa 372 |||| ||||||||||| ||| || ||| |||||| Sbjct: 77235 tggtcattcaacaaggccgactggcagagcagaa 77202 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 527 ttcacagaggatgccattaagtttaaaatggatgaca 563 |||||||||||||| ||||| |||||||||||||||| Sbjct: 76964 ttcacagaggatgctattaaatttaaaatggatgaca 76928 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 564 ctgctgaattgtatgattttgatggtgataagg 596 |||| ||||||||||||||||||| |||||||| Sbjct: 76860 ctgcggaattgtatgattttgatgatgataagg 76828
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 206 bits (104), Expect = 6e-50 Identities = 149/164 (90%) Strand = Plus / Minus Query: 26 tattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcattt 85 |||||||| |||||||||| ||| |||||||| |||||||| ||||||||||| || || Sbjct: 15433 tattgccggatagatggaaatactggtggagaagatcgtgatgcatccattgaagctttc 15374 Query: 86 aacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttggt 145 ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 15373 aacaaaccaggcagtgaaaagtttgtttttttgctttcaaccagggctggtggccttggc 15314 Query: 146 atcaaccttgccactgctgatgttgtgattctttatgatagtga 189 ||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 15313 atcaaccttgctactgctgatgttgtggttctttatgatagtga 15270 Score = 145 bits (73), Expect = 2e-31 Identities = 82/85 (96%) Strand = Plus / Minus Query: 192 ggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaag 251 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 15182 ggaatccacaagctgatctgcaagctcaagaccgtgcacataggataggtcagaagaaag 15123 Query: 252 aagtccaagttttccgattttgcac 276 |||| |||||||||||||||||||| Sbjct: 15122 aagttcaagttttccgattttgcac 15098 Score = 133 bits (67), Expect = 8e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 14833 ctgtcaataaggatgatctgttgcaaatggtaagatttggtgcggaaatggtattcagtt 14774 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggaga 489 | ||||| |||||||| |||||||||||| ||||| | || |||||||||||||| Sbjct: 14773 ccaaggacagcacaattacagatgaggatattgaccgtatcatagctaaaggaga 14719 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 279 agtataccattgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctt 338 |||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 15012 agtataccatcgaggagaaagtgattgagagggcatacaagaagcttgcattggatgctt 14953 Query: 339 tggttattcaacaaggacgattgtcagggcagaa 372 |||| ||||||||||| ||| || ||| |||||| Sbjct: 14952 tggtcattcaacaaggccgactggcagagcagaa 14919 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 527 ttcacagaggatgccattaagtttaaaatggatgaca 563 |||||||||||||| ||||| |||||||||||||||| Sbjct: 14681 ttcacagaggatgctattaaatttaaaatggatgaca 14645 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 564 ctgctgaattgtatgattttgatggtgataagg 596 |||| ||||||||||||||||||| |||||||| Sbjct: 14577 ctgcggaattgtatgattttgatgatgataagg 14545
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 206 bits (104), Expect = 6e-50 Identities = 149/164 (90%) Strand = Plus / Minus Query: 26 tattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcattt 85 |||||||| |||||||||| ||| |||||||| |||||||| ||||||||||| || || Sbjct: 15061664 tattgccggatagatggaaatactggtggagaagatcgtgatgcatccattgaagctttc 15061605 Query: 86 aacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttggt 145 ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 15061604 aacaaaccaggcagtgaaaagtttgtttttttgctttcaaccagggctggtggccttggc 15061545 Query: 146 atcaaccttgccactgctgatgttgtgattctttatgatagtga 189 ||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 15061544 atcaaccttgctactgctgatgttgtggttctttatgatagtga 15061501 Score = 145 bits (73), Expect = 2e-31 Identities = 82/85 (96%) Strand = Plus / Minus Query: 192 ggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaag 251 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 15061413 ggaatccacaagctgatctgcaagctcaagaccgtgcacataggataggtcagaagaaag 15061354 Query: 252 aagtccaagttttccgattttgcac 276 |||| |||||||||||||||||||| Sbjct: 15061353 aagttcaagttttccgattttgcac 15061329 Score = 133 bits (67), Expect = 8e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 15061064 ctgtcaataaggatgatctgttgcaaatggtaagatttggtgcggaaatggtattcagtt 15061005 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggaga 489 | ||||| |||||||| |||||||||||| ||||| | || |||||||||||||| Sbjct: 15061004 ccaaggacagcacaattacagatgaggatattgaccgtatcatagctaaaggaga 15060950 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 279 agtataccattgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctt 338 |||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 15061243 agtataccatcgaggagaaagtgattgagagggcatacaagaagcttgcattggatgctt 15061184 Query: 339 tggttattcaacaaggacgattgtcagggcagaa 372 |||| ||||||||||| ||| || ||| |||||| Sbjct: 15061183 tggtcattcaacaaggccgactggcagagcagaa 15061150 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 527 ttcacagaggatgccattaagtttaaaatggatgaca 563 |||||||||||||| ||||| |||||||||||||||| Sbjct: 15060912 ttcacagaggatgctattaaatttaaaatggatgaca 15060876 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 564 ctgctgaattgtatgattttgatggtgataagg 596 |||| ||||||||||||||||||| |||||||| Sbjct: 15060808 ctgcggaattgtatgattttgatgatgataagg 15060776 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 582 ttgatggtgataaggaggaaga 603 |||||||||||||||||||||| Sbjct: 13225084 ttgatggtgataaggaggaaga 13225105
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0784G04 Length = 157458 Score = 206 bits (104), Expect = 6e-50 Identities = 149/164 (90%) Strand = Plus / Minus Query: 26 tattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcattt 85 |||||||| |||||||||| ||| |||||||| |||||||| ||||||||||| || || Sbjct: 91232 tattgccggatagatggaaatactggtggagaagatcgtgatgcatccattgaagctttc 91173 Query: 86 aacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttggt 145 ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 91172 aacaaaccaggcagtgaaaagtttgtttttttgctttcaaccagggctggtggccttggc 91113 Query: 146 atcaaccttgccactgctgatgttgtgattctttatgatagtga 189 ||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 91112 atcaaccttgctactgctgatgttgtggttctttatgatagtga 91069 Score = 145 bits (73), Expect = 2e-31 Identities = 82/85 (96%) Strand = Plus / Minus Query: 192 ggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaag 251 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 90981 ggaatccacaagctgatctgcaagctcaagaccgtgcacataggataggtcagaagaaag 90922 Query: 252 aagtccaagttttccgattttgcac 276 |||| |||||||||||||||||||| Sbjct: 90921 aagttcaagttttccgattttgcac 90897 Score = 133 bits (67), Expect = 8e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 90632 ctgtcaataaggatgatctgttgcaaatggtaagatttggtgcggaaatggtattcagtt 90573 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggaga 489 | ||||| |||||||| |||||||||||| ||||| | || |||||||||||||| Sbjct: 90572 ccaaggacagcacaattacagatgaggatattgaccgtatcatagctaaaggaga 90518 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 279 agtataccattgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctt 338 |||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 90811 agtataccatcgaggagaaagtgattgagagggcatacaagaagcttgcattggatgctt 90752 Query: 339 tggttattcaacaaggacgattgtcagggcagaa 372 |||| ||||||||||| ||| || ||| |||||| Sbjct: 90751 tggtcattcaacaaggccgactggcagagcagaa 90718 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 527 ttcacagaggatgccattaagtttaaaatggatgaca 563 |||||||||||||| ||||| |||||||||||||||| Sbjct: 90480 ttcacagaggatgctattaaatttaaaatggatgaca 90444 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 564 ctgctgaattgtatgattttgatggtgataagg 596 |||| ||||||||||||||||||| |||||||| Sbjct: 90376 ctgcggaattgtatgattttgatgatgataagg 90344
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1329D01 Length = 141938 Score = 206 bits (104), Expect = 6e-50 Identities = 149/164 (90%) Strand = Plus / Minus Query: 26 tattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcattt 85 |||||||| |||||||||| ||| |||||||| |||||||| ||||||||||| || || Sbjct: 87911 tattgccggatagatggaaatactggtggagaagatcgtgatgcatccattgaagctttc 87852 Query: 86 aacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttggt 145 ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 87851 aacaaaccaggcagtgaaaagtttgtttttttgctttcaaccagggctggtggccttggc 87792 Query: 146 atcaaccttgccactgctgatgttgtgattctttatgatagtga 189 ||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 87791 atcaaccttgctactgctgatgttgtggttctttatgatagtga 87748 Score = 145 bits (73), Expect = 2e-31 Identities = 82/85 (96%) Strand = Plus / Minus Query: 192 ggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaag 251 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 87660 ggaatccacaagctgatctgcaagctcaagaccgtgcacataggataggtcagaagaaag 87601 Query: 252 aagtccaagttttccgattttgcac 276 |||| |||||||||||||||||||| Sbjct: 87600 aagttcaagttttccgattttgcac 87576 Score = 133 bits (67), Expect = 8e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 87311 ctgtcaataaggatgatctgttgcaaatggtaagatttggtgcggaaatggtattcagtt 87252 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggaga 489 | ||||| |||||||| |||||||||||| ||||| | || |||||||||||||| Sbjct: 87251 ccaaggacagcacaattacagatgaggatattgaccgtatcatagctaaaggaga 87197 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 279 agtataccattgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctt 338 |||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 87490 agtataccatcgaggagaaagtgattgagagggcatacaagaagcttgcattggatgctt 87431 Query: 339 tggttattcaacaaggacgattgtcagggcagaa 372 |||| ||||||||||| ||| || ||| |||||| Sbjct: 87430 tggtcattcaacaaggccgactggcagagcagaa 87397 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 527 ttcacagaggatgccattaagtttaaaatggatgaca 563 |||||||||||||| ||||| |||||||||||||||| Sbjct: 87159 ttcacagaggatgctattaaatttaaaatggatgaca 87123 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 564 ctgctgaattgtatgattttgatggtgataagg 596 |||| ||||||||||||||||||| |||||||| Sbjct: 87055 ctgcggaattgtatgattttgatgatgataagg 87023
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 206 bits (104), Expect = 6e-50 Identities = 149/164 (90%) Strand = Plus / Minus Query: 26 tattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcattt 85 |||||||| |||||||||| ||| |||||||| |||||||| ||||||||||| || || Sbjct: 33630 tattgccggatagatggaaatactggtggagaagatcgtgatgcatccattgaagctttc 33571 Query: 86 aacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttggt 145 ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 33570 aacaaaccaggcagtgaaaagtttgtttttttgctttcaaccagggctggtggccttggc 33511 Query: 146 atcaaccttgccactgctgatgttgtgattctttatgatagtga 189 ||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 33510 atcaaccttgctactgctgatgttgtggttctttatgatagtga 33467 Score = 145 bits (73), Expect = 2e-31 Identities = 82/85 (96%) Strand = Plus / Minus Query: 192 ggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaag 251 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 33379 ggaatccacaagctgatctgcaagctcaagaccgtgcacataggataggtcagaagaaag 33320 Query: 252 aagtccaagttttccgattttgcac 276 |||| |||||||||||||||||||| Sbjct: 33319 aagttcaagttttccgattttgcac 33295 Score = 133 bits (67), Expect = 8e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 33030 ctgtcaataaggatgatctgttgcaaatggtaagatttggtgcggaaatggtattcagtt 32971 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggaga 489 | ||||| |||||||| |||||||||||| ||||| | || |||||||||||||| Sbjct: 32970 ccaaggacagcacaattacagatgaggatattgaccgtatcatagctaaaggaga 32916 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 279 agtataccattgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctt 338 |||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct: 33209 agtataccatcgaggagaaagtgattgagagggcatacaagaagcttgcattggatgctt 33150 Query: 339 tggttattcaacaaggacgattgtcagggcagaa 372 |||| ||||||||||| ||| || ||| |||||| Sbjct: 33149 tggtcattcaacaaggccgactggcagagcagaa 33116 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 527 ttcacagaggatgccattaagtttaaaatggatgaca 563 |||||||||||||| ||||| |||||||||||||||| Sbjct: 32878 ttcacagaggatgctattaaatttaaaatggatgaca 32842 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 564 ctgctgaattgtatgattttgatggtgataagg 596 |||| ||||||||||||||||||| |||||||| Sbjct: 32774 ctgcggaattgtatgattttgatgatgataagg 32742
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 129 bits (65), Expect = 1e-26 Identities = 143/169 (84%) Strand = Plus / Plus Query: 25 atattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcatt 84 |||||||||||| ||||| | ||| ||||| || |||||||| || || ||||| || || Sbjct: 14828 atattgccgaattgatgggaatactggtggtgaagatcgtgatgcttcgattgaagcttt 14887 Query: 85 taacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttgg 144 ||||| ||||| ||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 14888 caacaagccagggagtgaaaaatttgttttcttgctttcgactagggcaggtggtcttgg 14947 Query: 145 tatcaaccttgccactgctgatgttgtgattctttatgatagtgactgg 193 || || ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 14948 gataaatcttgctactgctgatgttgttattctttatgacagtgactgg 14996 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||||||||||||||| ||||||| ||||| ||||||||||| |||||||| ||||| | Sbjct: 15438 ctgtcaataaggatgagctattgcagatggtcagatttggtgctgaaatggtattcagct 15497 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggagaaga 492 | ||||||||||||||||||||||| ||| ||||| | || || ||||| |||||||| Sbjct: 15498 ccaaggatagcacaataacagatgaagatattgaccgcatcatcgctaagggagaaga 15555 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 279 agtataccattgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctt 338 ||||||| ||||||||||| |||||||||||||| || ||||||||||| ||||||||| Sbjct: 15260 agtatacaattgaggaaaaggtgattgagagagcttataagaagcttgccctggatgctt 15319 Query: 339 tggttattcaacaaggacgattgtcagggcagaaa 373 |||| || ||||| || |||||| ||| ||||||| Sbjct: 15320 tggtcatacaacagggtcgattggcagagcagaaa 15354 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 192 ggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaag 251 ||||||| |||| ||||| ||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 15073 ggaatcctcaagtggatctgcaagcgcaagatcgtgcacatagaattggtcaaaagaaag 15132 Query: 252 aagtccaagtttt 264 |||| |||||||| Sbjct: 15133 aagttcaagtttt 15145 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 564 ctgctgaattgtatgattttgatggtgataagg 596 |||||||| ||||||||||||||| |||||||| Sbjct: 15980 ctgctgaactgtatgattttgatgatgataagg 16012 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 527 ttcacagaggatgccattaagtttaaaatggatgaca 563 |||||||| ||||| |||||||| ||||||||||||| Sbjct: 15590 ttcacagaagatgctattaagttcaaaatggatgaca 15626
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 129 bits (65), Expect = 1e-26 Identities = 143/169 (84%) Strand = Plus / Minus Query: 25 atattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcatt 84 |||||||||||| ||||| | ||| ||||| || |||||||| || || ||||| || || Sbjct: 47354 atattgccgaattgatgggaatactggtggtgaagatcgtgatgcttcgattgaagcttt 47295 Query: 85 taacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttgg 144 ||||| ||||| ||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 47294 caacaagccagggagtgaaaaatttgttttcttgctttcgactagggcaggtggtcttgg 47235 Query: 145 tatcaaccttgccactgctgatgttgtgattctttatgatagtgactgg 193 || || ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 47234 gataaatcttgctactgctgatgttgttattctttatgacagtgactgg 47186 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||||||||||||||| ||||||| ||||| ||||||||||| |||||||| ||||| | Sbjct: 46744 ctgtcaataaggatgagctattgcagatggtcagatttggtgctgaaatggtattcagct 46685 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggagaaga 492 | ||||||||||||||||||||||| ||| ||||| | || || ||||| |||||||| Sbjct: 46684 ccaaggatagcacaataacagatgaagatattgaccgcatcatcgctaagggagaaga 46627 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 279 agtataccattgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctt 338 ||||||| ||||||||||| |||||||||||||| || ||||||||||| ||||||||| Sbjct: 46922 agtatacaattgaggaaaaggtgattgagagagcttataagaagcttgccctggatgctt 46863 Query: 339 tggttattcaacaaggacgattgtcagggcagaaa 373 |||| || ||||| || |||||| ||| ||||||| Sbjct: 46862 tggtcatacaacagggtcgattggcagagcagaaa 46828 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 192 ggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaag 251 ||||||| |||| ||||| ||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 47109 ggaatcctcaagtggatctgcaagcgcaagatcgtgcacatagaattggtcaaaagaaag 47050 Query: 252 aagtccaagtttt 264 |||| |||||||| Sbjct: 47049 aagttcaagtttt 47037 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 527 ttcacagaggatgccattaagtttaaaatggatgaca 563 |||||||| ||||| |||||||| ||||||||||||| Sbjct: 46592 ttcacagaagatgctattaagttcaaaatggatgaca 46556 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 564 ctgctgaattgtatgattttgatggtgataagg 596 |||||||| ||||||||||||||| |||||||| Sbjct: 46184 ctgctgaactgtatgattttgatgatgataagg 46152
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 129 bits (65), Expect = 1e-26 Identities = 143/169 (84%) Strand = Plus / Plus Query: 25 atattgccgaatagatggaagtacaggtggagatgatcgtgacgcatccattgatgcatt 84 |||||||||||| ||||| | ||| ||||| || |||||||| || || ||||| || || Sbjct: 2820217 atattgccgaattgatgggaatactggtggtgaagatcgtgatgcttcgattgaagcttt 2820276 Query: 85 taacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttgg 144 ||||| ||||| ||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 2820277 caacaagccagggagtgaaaaatttgttttcttgctttcgactagggcaggtggtcttgg 2820336 Query: 145 tatcaaccttgccactgctgatgttgtgattctttatgatagtgactgg 193 || || ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 2820337 gataaatcttgctactgctgatgttgttattctttatgacagtgactgg 2820385 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||||||||||||||| ||||||| ||||| ||||||||||| |||||||| ||||| | Sbjct: 2820827 ctgtcaataaggatgagctattgcagatggtcagatttggtgctgaaatggtattcagct 2820886 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggagaaga 492 | ||||||||||||||||||||||| ||| ||||| | || || ||||| |||||||| Sbjct: 2820887 ccaaggatagcacaataacagatgaagatattgaccgcatcatcgctaagggagaaga 2820944 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 279 agtataccattgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctt 338 ||||||| ||||||||||| |||||||||||||| || ||||||||||| ||||||||| Sbjct: 2820649 agtatacaattgaggaaaaggtgattgagagagcttataagaagcttgccctggatgctt 2820708 Query: 339 tggttattcaacaaggacgattgtcagggcagaaa 373 |||| || ||||| || |||||| ||| ||||||| Sbjct: 2820709 tggtcatacaacagggtcgattggcagagcagaaa 2820743 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 192 ggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaaaagaaag 251 ||||||| |||| ||||| ||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 2820462 ggaatcctcaagtggatctgcaagcgcaagatcgtgcacatagaattggtcaaaagaaag 2820521 Query: 252 aagtccaagtttt 264 |||| |||||||| Sbjct: 2820522 aagttcaagtttt 2820534 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 564 ctgctgaattgtatgattttgatggtgataagg 596 |||||||| ||||||||||||||| |||||||| Sbjct: 2821369 ctgctgaactgtatgattttgatgatgataagg 2821401 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 527 ttcacagaggatgccattaagtttaaaatggatgaca 563 |||||||| ||||| |||||||| ||||||||||||| Sbjct: 2820979 ttcacagaagatgctattaagttcaaaatggatgaca 2821015 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 agtttgttttcttgctttcaa 125 ||||||||||||||||||||| Sbjct: 2661384 agtttgttttcttgctttcaa 2661364
>gb|AC069328.1|AC069328 Genomic Sequence For Arabidopsis thaliana Clone T28N17 From Chromosome V, complete sequence Length = 75593 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 85 taacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttgg 144 |||||| |||||||||||||| || ||||||||| | || || || ||||| |||||||| Sbjct: 4246 taacaagccaggaagtgagaaattcgttttcttgttatccactagagctggaggacttgg 4305 Query: 145 tatcaaccttgccactgctgatgttgtgattctttatgatagtgactgg 193 |||||| ||||| ||||| ||||||||||| || ||||||||||||||| Sbjct: 4306 tatcaatcttgctactgcagatgttgtgatcctctatgatagtgactgg 4354 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||| ||||||||||| || | |||||||| |||| |||||| ||||||||||| |||| Sbjct: 4771 ctgttaataaggatgagttgcttcaaatggtgagatatggtgctgaaatggtgtttagtt 4830 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggagaagag 493 | || ||||||||||| || ||||||||| |||||||||| || || |||||||||||| Sbjct: 4831 ctaaagatagcacaattacggatgaggatattgacagaatcattgccaaaggagaagag 4889 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 212 caagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagttttccgattt 271 |||||||| || |||||||||||||| |||||||| |||||||| ||||| ||||| || Sbjct: 4449 caagctcaggatcgtgcacataggattggtcaaaaaaaagaagttcaagtgttccggttc 4508 Query: 272 tgcaccgag 280 ||||||||| Sbjct: 4509 tgcaccgag 4517 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 287 attgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctttggttatt 346 ||||||| ||||| ||||||||||| ||||||||| | ||| | |||||| |||||||| Sbjct: 4600 attgaggctaaagtcattgagagagcttacaagaagttggcacttgatgctctggttatt 4659 Query: 347 caacaagg 354 || ||||| Sbjct: 4660 cagcaagg 4667
>gb|AC051627.4|AC051627 Genomic Sequence For Arabidopsis thaliana Clone T1A4 From Chromosome V, complete sequence Length = 85746 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 85 taacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttgg 144 |||||| |||||||||||||| || ||||||||| | || || || ||||| |||||||| Sbjct: 63282 taacaagccaggaagtgagaaattcgttttcttgttatccactagagctggaggacttgg 63341 Query: 145 tatcaaccttgccactgctgatgttgtgattctttatgatagtgactgg 193 |||||| ||||| ||||| ||||||||||| || ||||||||||||||| Sbjct: 63342 tatcaatcttgctactgcagatgttgtgatcctctatgatagtgactgg 63390 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||| ||||||||||| || | |||||||| |||| |||||| ||||||||||| |||| Sbjct: 63807 ctgttaataaggatgagttgcttcaaatggtgagatatggtgctgaaatggtgtttagtt 63866 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggagaagag 493 | || ||||||||||| || ||||||||| |||||||||| || || |||||||||||| Sbjct: 63867 ctaaagatagcacaattacggatgaggatattgacagaatcattgccaaaggagaagag 63925 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 212 caagctcaagaccgtgcacataggataggtcaaaagaaagaagtccaagttttccgattt 271 |||||||| || |||||||||||||| |||||||| |||||||| ||||| ||||| || Sbjct: 63485 caagctcaggatcgtgcacataggattggtcaaaaaaaagaagttcaagtgttccggttc 63544 Query: 272 tgcaccgag 280 ||||||||| Sbjct: 63545 tgcaccgag 63553 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 287 attgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctttggttatt 346 ||||||| ||||| ||||||||||| ||||||||| | ||| | |||||| |||||||| Sbjct: 63636 attgaggctaaagtcattgagagagcttacaagaagttggcacttgatgctctggttatt 63695 Query: 347 caacaagg 354 || ||||| Sbjct: 63696 cagcaagg 63703
>gb|AC011623.5|ATAC011623 Arabidopsis thaliana chromosome III BAC F24P17 genomic sequence, complete sequence Length = 86022 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 375 ctgtcaataaggatgacttattgcaaatggttagatttggtgcggaaatggtgttcagtt 434 |||||||||||||||| || | |||||||| |||| |||||| || ||||||||||||| Sbjct: 47802 ctgtcaataaggatgagttgcttcaaatggtaagatatggtgctgagatggtgttcagtt 47743 Query: 435 cgaaggatagcacaataacagatgaggatgttgacagaattatagctaaaggagaagag 493 | || ||||||||||| ||||| |||||| |||| ||||| || || |||||||||||| Sbjct: 47742 ctaaagatagcacaatcacagacgaggatattgatagaatcattgccaaaggagaagag 47684 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 86 aacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggacttggt 145 ||||| |||||||||||||| |||||||||||| | || || || ||||| || |||||| Sbjct: 48321 aacaagccaggaagtgagaaatttgttttcttgttatctactagagctggagggcttggt 48262 Query: 146 atcaaccttgccactgctgatgttgtgattctttatgatagtga 189 ||||| ||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 48261 atcaatcttgctactgcagatgttgtgatcctttacgatagtga 48218 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 287 attgaggaaaaagtgattgagagagcgtacaagaagcttgcattggatgctttggttatt 346 |||||||| ||||||||||| ||||| ||||||||| | ||| | |||||| |||||||| Sbjct: 47966 attgaggagaaagtgattgaaagagcttacaagaagttagcacttgatgctctggttatt 47907 Query: 347 caacaagg 354 |||||||| Sbjct: 47906 caacaagg 47899 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 527 ttcacagaggatgccattaagtttaaaatggatgaca 563 |||||||| ||||| || |||||||||||||||||| Sbjct: 47650 ttcacagaagatgctatacagtttaaaatggatgaca 47614
>gb|AY103692.1| Zea mays PCO130889 mRNA sequence Length = 1536 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 527 ttcacagaggatgccattaagtttaaaatggatgacactgctgaattgtatgattttgat 586 ||||||||||| |||||||| ||||| |||||||| | ||| ||| |||||||||||||| Sbjct: 3 ttcacagaggacgccattaaatttaagatggatgataatgccgaactgtatgattttgat 62 Query: 587 ggtgataaggaggaagacaatgctgatttca 617 | ||| ||||| ||| |||| | |||||||| Sbjct: 63 gatgagaaggatgaaaacaaggttgatttca 93
>dbj|AB106670.1| Ipomoea batatas DNA, microsatellite IBSSR18 Length = 262 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 401 atggttagatttggtgcggaaatggtgttcagttcgaaggatagcacaataacagatgag 460 ||||| || |||||||| || ||||| |||||||| |||||||||||||| |||||||| Sbjct: 258 atggtgaggtttggtgctgagatggttttcagttccaaggatagcacaatcacagatgaa 199 Query: 461 gatgttgacagaattatagctaaaggagaagag 493 ||| | || || || || ||||||||||||||| Sbjct: 198 gatatagataggatcattgctaaaggagaagag 166
>ref|XM_517459.1| PREDICTED: Pan troglodytes similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5; sucrose nonfermenting-like 5 (LOC461517), mRNA Length = 3534 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| ||||| ||||| ||||| ||||||||||| || ||| | |||||| ||| Sbjct: 2056 gctggtggtcttggcatcaatcttgcgactgctgatgtagtaattttgtatgattctgat 2115 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 ||||||||||||| |||||||| ||| ||||| |||||||| Sbjct: 2116 tggaatccacaagtagatcttcaggctatggaccgagcacatag 2159
>ref|XM_661921.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.60441) partial mRNA Length = 3308 Score = 63.9 bits (32), Expect = 6e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 82 atttaacaaaccaggaagtgagaagtttgttttcttgctttcaaccagggctggtggact 141 ||||||||||||| ||||| ||| ||||||| | ||||| || || ||||| ||| | Sbjct: 1671 atttaacaaaccaaatagtgaaaagcttgtttttctactttccactagagctggaggatt 1730 Query: 142 tggtatcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccaca 201 |||||||| | || ||||||||| |||| |||||||||||| ||| ||||| || || Sbjct: 1731 aggtatcaatttggctactgctgatattgttattctttatgattctgattggaaccctca 1790 Query: 202 agctgatcttcaagct 217 ||| |||||||||||| Sbjct: 1791 agcagatcttcaagct 1806
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4 Length = 293050 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 158 actgctgatgttgtgattctttatgatagtgactggaatccacaagctgatcttcaagct 217 ||||||||| |||| |||||||||||| ||| |||||||| ||||| |||||||||||| Sbjct: 159441 actgctgatattgttattctttatgattctgattggaatcctcaagcagatcttcaagct 159500
>gb|AY062186.1| Oryza sativa chromatin-remodeling factor CHD3 (PKL) mRNA, complete cds Length = 4443 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 119 ctttcaaccagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctt 178 ||||||||||| |||||||| |||||||| || || || ||||| ||| ||| ||| || Sbjct: 2044 ctttcaaccagagctggtggtcttggtataaatctggcaactgccgatactgtaattatt 2103 Query: 179 tatgatagtgactggaatccacaagctgatcttcaagct 217 ||||| ||||| |||||||| || |||||| | |||||| Sbjct: 2104 tatgacagtgattggaatcctcatgctgatttacaagct 2142
>ref|XM_873962.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 13 (LOC537503), mRNA Length = 4707 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 2006 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2050
>ref|XM_873859.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 12 (LOC537503), mRNA Length = 4692 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 2006 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2050
>ref|XM_873768.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 11 (LOC537503), mRNA Length = 4689 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 2006 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2050
>ref|XM_873674.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 10 (LOC537503), mRNA Length = 4689 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 2006 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2050
>ref|XM_873582.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 9 (LOC537503), mRNA Length = 4710 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 2006 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2050
>ref|XM_873477.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 8 (LOC537503), mRNA Length = 4665 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 2006 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2050
>ref|XM_617671.2| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 1 (LOC537503), mRNA Length = 4653 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 2006 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2050
>ref|XM_873280.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 7 (LOC537503), mRNA Length = 4689 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 2006 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2050
>ref|XM_873175.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 6 (LOC537503), mRNA Length = 3782 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 1102 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 1146
>ref|XM_873078.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 5 (LOC537503), mRNA Length = 4683 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 2003 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2047
>ref|XM_872970.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 4 (LOC537503), mRNA Length = 4710 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 2030 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2074
>ref|XM_872889.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 3 (LOC537503), mRNA Length = 4647 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 1967 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2011
>ref|XM_864313.1| PREDICTED: Bos taurus similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)..., transcript variant 2 (LOC537503), mRNA Length = 4815 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgatt 175 |||||||| ||||| ||||| ||||| |||||||||||||||||| Sbjct: 2135 gctggtggtcttggcatcaatcttgctactgctgatgttgtgatt 2179
>ref|NM_128074.2| Arabidopsis thaliana PKL (PICKLE) AT2G25170 (PKL) mRNA, complete cds Length = 4383 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagc 216 ||||||| |||||||||||||| || |||||||||||||| Sbjct: 2068 tttatgacagtgactggaatcctcatgctgatcttcaagc 2107
>ref|NM_003601.2| Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (SMARCA5), mRNA Length = 3866 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| ||||| ||||| ||||| ||||||||||| || ||| | |||||| ||| Sbjct: 2143 gctggtggtcttggcatcaatcttgcgactgctgatgtagtaattttgtatgattctgat 2202 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| |||||||| ||| ||||| |||||||| Sbjct: 2203 tggaatccccaagtagatcttcaggctatggaccgagcacatag 2246
>gb|BC023144.1| Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, mRNA (cDNA clone MGC:17104 IMAGE:4340921), complete cds Length = 3617 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| ||||| ||||| ||||| ||||||||||| || ||| | |||||| ||| Sbjct: 1894 gctggtggtcttggcatcaatcttgcgactgctgatgtagtaattttgtatgattctgat 1953 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| |||||||| ||| ||||| |||||||| Sbjct: 1954 tggaatccccaagtagatcttcaggctatggaccgagcacatag 1997
>emb|AJ719817.1| Gallus gallus mRNA for hypothetical protein, clone 6n5 Length = 3588 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 158 actgctgatgttgtgattctttatgatagtgactggaatccacaagctgatcttca 213 |||||||||||||| ||||| |||||| |||||||||||||||| |||||||| Sbjct: 1888 actgctgatgttgtaattctgtatgattcagactggaatccacaagtagatcttca 1943
>ref|XM_226380.3| PREDICTED: Rattus norvegicus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (predicted) (Smarca5_predicted), mRNA Length = 4647 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||||||||| ||||||||||| || ||| | |||||| || Sbjct: 2041 gctggtggtctgggcatcaaccttgcaactgctgatgtagtaattttatatgattcagat 2100 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| ||||||||| ||| ||||| |||||||| Sbjct: 2101 tggaatcctcaagttgatcttcaggctatggaccgagcacatag 2144
>gb|AF185577.1|AF185577 Arabidopsis thaliana chromatin remodeling factor CHD3 (PKL) mRNA, complete cds Length = 4180 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagc 216 ||||||| |||||||||||||| || |||||||||||||| Sbjct: 2087 tttatgacagtgactggaatcctcatgctgatcttcaagc 2126
>gb|AF185578.1|AF185578 Arabidopsis thaliana GYMNOS/PICKLE mRNA, complete cds Length = 4334 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagc 216 ||||||| |||||||||||||| || |||||||||||||| Sbjct: 2067 tttatgacagtgactggaatcctcatgctgatcttcaagc 2106
>dbj|AB010882.1| Homo sapiens mRNA for hSNF2H, complete cds Length = 3606 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| ||||| ||||| ||||| ||||||||||| || ||| | |||||| ||| Sbjct: 1883 gctggtggtcttggcatcaatcttgcgactgctgatgtagtaattttgtatgattctgat 1942 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| |||||||| ||| ||||| |||||||| Sbjct: 1943 tggaatccccaagtagatcttcaggctatggaccgagcacatag 1986
>ref|XM_965350.1| PREDICTED: Tribolium castaneum similar to CG3696-PA, isoform A (LOC659010), mRNA Length = 12030 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 179 tatgatagtgactggaatccacaagctgatcttcaagctcaag 221 ||||| |||||||||||||||||| |||||||||||||||| Sbjct: 5998 tatgacagtgactggaatccacaaaacgatcttcaagctcaag 6040
>gb|AC099396.5| Homo sapiens BAC clone RP11-122I3 from 4, complete sequence Length = 18585 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| ||||| ||||| ||||| ||||||||||| || ||| | |||||| ||| Sbjct: 14446 gctggtggtcttggcatcaatcttgcgactgctgatgtagtaattttgtatgattctgat 14505 Query: 191 tggaatccacaagctgatcttca 213 |||||||| |||| |||||||| Sbjct: 14506 tggaatccccaagtagatcttca 14528
>ref|XM_746392.1| Aspergillus fumigatus Af293 SNF2 family helicase/ATPase (Afu4g13460) partial mRNA Length = 3336 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 143 ggtatcaaccttgccactgctgatgttgtgattctttatgatagtgactggaatccacaa 202 ||||||||||| | ||||| ||| |||| ||||||| |||||||| |||||||| || Sbjct: 1720 ggtatcaacctgacaactgcagatattgtcgttctttacgatagtgattggaatcctcag 1779 Query: 203 gctgatcttcaagc 216 |||||||| ||||| Sbjct: 1780 gctgatctgcaagc 1793
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 206 gatcttcaagctcaagaccgtgcacataggataggtcaaaagaaagaagt 255 ||||| ||||||||||||||||| ||| | || ||||||||||| ||||| Sbjct: 1662281 gatctgcaagctcaagaccgtgcgcatcgtattggtcaaaagaatgaagt 1662330
>ref|NM_001007992.1| Xenopus tropicalis MGC79455 protein (MGC79455), mRNA Length = 3700 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 152 cttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagctgatctt 211 ||||| || ||||||||||| ||| | |||||| |||||||||||||||| ||||||| Sbjct: 1839 cttgctacagctgatgttgttattatatatgattcagactggaatccacaagttgatctt 1898 Query: 212 ca 213 || Sbjct: 1899 ca 1900
>gb|BC080870.1| Xenopus tropicalis MGC79455 protein, mRNA (cDNA clone MGC:79455 IMAGE:5307377), complete cds Length = 3700 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 152 cttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagctgatctt 211 ||||| || ||||||||||| ||| | |||||| |||||||||||||||| ||||||| Sbjct: 1839 cttgctacagctgatgttgttattatatatgattcagactggaatccacaagttgatctt 1898 Query: 212 ca 213 || Sbjct: 1899 ca 1900
>emb|CT485714.1| Xenopus tropicalis finished cDNA, clone TGas059c16 Length = 3683 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 152 cttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagctgatctt 211 ||||| || ||||||||||| ||| | |||||| |||||||||||||||| ||||||| Sbjct: 1816 cttgctacagctgatgttgttattatatatgattcagactggaatccacaagttgatctt 1875 Query: 212 ca 213 || Sbjct: 1876 ca 1877
>gb|AY020270.2| Oryza sativa microsatellite MRG2595 containing (GA)X12, genomic sequence Length = 217 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 527 ttcacagaggatgccattaagtttaaaatggatgaca 563 |||||||| ||||| |||||||| ||||||||||||| Sbjct: 170 ttcacagaagatgctattaagttcaaaatggatgaca 134
>ref|XM_449279.1| Candida glabrata CBS138, CAGL0L11770g partial mRNA Length = 4431 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 107 tttgttttcttgctttcaaccagggctggtggacttggtatcaac 151 ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 2338 tttgttttcttactttccacaagagctggtggtcttggtatcaac 2382
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 107 tttgttttcttgctttcaaccagggctggtggacttggtatcaac 151 ||||||||||| ||||| || || |||||||| |||||||||||| Sbjct: 1256462 tttgttttcttactttccacaagagctggtggtcttggtatcaac 1256506
>gb|AY903252.1| Rattus norvegicus strain WKY chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6088 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 129 gggctggtggacttggtatcaaccttgccactgctga 165 ||||||||||||| || |||||||| ||||||||||| Sbjct: 3280 gggctggtggactgggcatcaacctggccactgctga 3316
>gb|AY903251.1| Rattus norvegicus strain SHRSP chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6082 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 129 gggctggtggacttggtatcaaccttgccactgctga 165 ||||||||||||| || |||||||| ||||||||||| Sbjct: 3280 gggctggtggactgggcatcaacctggccactgctga 3316
>gb|AY903250.1| Rattus norvegicus strain SHR/OlaIpcv chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6088 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 129 gggctggtggacttggtatcaaccttgccactgctga 165 ||||||||||||| || |||||||| ||||||||||| Sbjct: 3280 gggctggtggactgggcatcaacctggccactgctga 3316
>gb|AY903249.1| Rattus norvegicus strain WHD chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6088 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 129 gggctggtggacttggtatcaaccttgccactgctga 165 ||||||||||||| || |||||||| ||||||||||| Sbjct: 3280 gggctggtggactgggcatcaacctggccactgctga 3316
>gb|AY903248.1| Rattus norvegicus strain WKY chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5991 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 129 gggctggtggacttggtatcaaccttgccactgctga 165 ||||||||||||| || |||||||| ||||||||||| Sbjct: 3285 gggctggtggactgggcatcaacctggccactgctga 3321
>gb|AY903247.1| Rattus norvegicus strain SHRSP chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5980 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 129 gggctggtggacttggtatcaaccttgccactgctga 165 ||||||||||||| || |||||||| ||||||||||| Sbjct: 3275 gggctggtggactgggcatcaacctggccactgctga 3311
>gb|AY903246.1| Rattus norvegicus strain SHR/OlaIpcv chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5986 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 129 gggctggtggacttggtatcaaccttgccactgctga 165 ||||||||||||| || |||||||| ||||||||||| Sbjct: 3280 gggctggtggactgggcatcaacctggccactgctga 3316
>gb|AY903245.1| Rattus norvegicus strain WHD chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5986 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 129 gggctggtggacttggtatcaaccttgccactgctga 165 ||||||||||||| || |||||||| ||||||||||| Sbjct: 3280 gggctggtggactgggcatcaacctggccactgctga 3316
>ref|XM_220602.3| PREDICTED: Rattus norvegicus chromodomain helicase DNA binding protein 3 (predicted) (Chd3_predicted), mRNA Length = 6599 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 129 gggctggtggacttggtatcaaccttgccactgctga 165 ||||||||||||| || |||||||| ||||||||||| Sbjct: 3584 gggctggtggactgggcatcaacctggccactgctga 3620
>dbj|AK114373.1| Ciona intestinalis cDNA, clone:cicl060a21, full insert sequence Length = 1489 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 131 gctggtggacttggtatcaaccttgccac 159 |||||||| |||||||||||||||||||| Sbjct: 923 gctggtggtcttggtatcaaccttgccac 895
>ref|XM_641557.1| Dictyostelium discoideum bromodomain-containing protein (DDB0220695), partial mRNA Length = 9744 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaaaa 246 |||||||||||| ||||||||||| ||||| ||||||||| | || |||||||| Sbjct: 6370 tggaatccacaaatggatcttcaagcacaagatcgtgcacatcgtattggtcaaaa 6425
>ref|XM_714975.1| Candida albicans SC5314 DNA helicase (CaO19_7869), mRNA Length = 3912 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 212 caagctcaagaccgtgcacataggataggtcaaaagaaagaagt 255 ||||||||||| ||||| ||||| || ||||||||||| ||||| Sbjct: 2773 caagctcaagatcgtgctcatagaattggtcaaaagaatgaagt 2816
>ref|XM_714845.1| Candida albicans SC5314 DNA helicase (CaO19_239), mRNA Length = 3912 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 212 caagctcaagaccgtgcacataggataggtcaaaagaaagaagt 255 ||||||||||| ||||| ||||| || ||||||||||| ||||| Sbjct: 2773 caagctcaagatcgtgctcatagaattggtcaaaagaatgaagt 2816
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 198 cacaagctgatcttcaagctcaagaccg 225 |||||||||||| ||||||||||||||| Sbjct: 2002147 cacaagctgatcgtcaagctcaagaccg 2002174
>gb|AC115013.18| Mus musculus chromosome 10, clone RP24-193P19, complete sequence Length = 183402 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 554 atggatgacactgctgaattgta 576 ||||||||||||||||||||||| Sbjct: 102621 atggatgacactgctgaattgta 102599
>ref|NR_002888.2| Mus musculus RIKEN cDNA 9230115A19 gene (9230115A19Rik) on chromosome 4 Length = 3752 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | |||||| || Sbjct: 1739 gctggtggtctgggcatcaatcttgcaactgctgatgtagtaattttatatgattcagat 1798 Query: 191 tggaatccacaagctgatcttca 213 |||||||| |||| ||||||||| Sbjct: 1799 tggaatcctcaagttgatcttca 1821
>dbj|AK079035.1| Mus musculus adult male epididymis cDNA, RIKEN full-length enriched library, clone:9230115A19 product:ATP-DEPENDENT CHROMATIN REMODELING PROTEIN SNF2H homolog [Mus musculus], full insert sequence Length = 1336 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | |||||| || Sbjct: 816 gctggtggtctgggcatcaatcttgcaactgctgatgtagtaattttatatgattcagat 875 Query: 191 tggaatccacaagctgatcttca 213 |||||||| |||| ||||||||| Sbjct: 876 tggaatcctcaagttgatcttca 898
>emb|AL731663.12| Mouse DNA sequence from clone RP23-360J20 on chromosome 4, complete sequence Length = 181033 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | |||||| || Sbjct: 170462 gctggtggtctgggcatcaatcttgcaactgctgatgtagtaattttatatgattcagat 170521 Query: 191 tggaatccacaagctgatcttca 213 |||||||| |||| ||||||||| Sbjct: 170522 tggaatcctcaagttgatcttca 170544
>ref|NG_005463.1| Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 pseudogene (LOC545716) on chromosome 4 Length = 3943 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | |||||| || Sbjct: 1829 gctggtggtctgggcatcaatcttgcaactgctgatgtagtaattttatatgattcagat 1888 Query: 191 tggaatccacaagctgatcttca 213 |||||||| |||| ||||||||| Sbjct: 1889 tggaatcctcaagttgatcttca 1911
>emb|AL627304.16| Mouse DNA sequence from clone RP23-285N14 on chromosome 4, complete sequence Length = 98133 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | |||||| || Sbjct: 62139 gctggtggtctgggcatcaatcttgcaactgctgatgtagtaattttatatgattcagat 62080 Query: 191 tggaatccacaagctgatcttca 213 |||||||| |||| ||||||||| Sbjct: 62079 tggaatcctcaagttgatcttca 62057
>emb|CT032254.1| Platynereis dumerilii EST IB0AAA42BC09FM1 Length = 773 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || ||| ||||| | || ||||||||| ||||||| | | ||| |||||| Sbjct: 703 gctggtggtctgggtctcaacttggctactgctgatactgtgattatatttgacagtgac 644 Query: 191 tggaatccaca 201 ||||||||||| Sbjct: 643 tggaatccaca 633
>emb|AL606963.5| Mouse DNA sequence from clone RP23-282N17 on chromosome 4, complete sequence Length = 132837 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | |||||| || Sbjct: 56598 gctggtggtctgggcatcaatcttgcaactgctgatgtagtaattttatatgattcagat 56539 Query: 191 tggaatccacaagctgatcttca 213 |||||||| |||| ||||||||| Sbjct: 56538 tggaatcctcaagttgatcttca 56516
>gb|BC076715.1| Xenopus laevis imitation switch ISWI, mRNA (cDNA clone MGC:79877 IMAGE:6317687), complete cds Length = 3682 Score = 44.1 bits (22), Expect = 0.54 Identities = 52/62 (83%) Strand = Plus / Plus Query: 152 cttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagctgatctt 211 ||||| |||||||||||||| ||| | |||||| ||||||||||| |||| ||| ||| Sbjct: 1821 cttgctactgctgatgttgttattatatatgattcagactggaatccgcaagttgacctt 1880 Query: 212 ca 213 || Sbjct: 1881 ca 1882
>ref|XM_854372.1| PREDICTED: Canis familiaris similar to helicase, lymphoid-specific, transcript variant 9 (LOC486809), mRNA Length = 2079 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagctcaaga 222 ||||||||||||| |||||||| || |||||||||| || ||||| Sbjct: 1895 tttatgatagtgattggaatcctcagtctgatcttcaggcccaaga 1940
>ref|XM_854335.1| PREDICTED: Canis familiaris similar to helicase, lymphoid-specific, transcript variant 8 (LOC486809), mRNA Length = 2883 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagctcaaga 222 ||||||||||||| |||||||| || |||||||||| || ||||| Sbjct: 1973 tttatgatagtgattggaatcctcagtctgatcttcaggcccaaga 2018
>ref|XM_854260.1| PREDICTED: Canis familiaris similar to helicase, lymphoid-specific, transcript variant 6 (LOC486809), mRNA Length = 2508 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagctcaaga 222 ||||||||||||| |||||||| || |||||||||| || ||||| Sbjct: 2063 tttatgatagtgattggaatcctcagtctgatcttcaggcccaaga 2108
>ref|XM_854228.1| PREDICTED: Canis familiaris similar to helicase, lymphoid-specific, transcript variant 5 (LOC486809), mRNA Length = 2220 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagctcaaga 222 ||||||||||||| |||||||| || |||||||||| || ||||| Sbjct: 1775 tttatgatagtgattggaatcctcagtctgatcttcaggcccaaga 1820
>ref|XM_854190.1| PREDICTED: Canis familiaris similar to helicase, lymphoid-specific, transcript variant 4 (LOC486809), mRNA Length = 2124 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagctcaaga 222 ||||||||||||| |||||||| || |||||||||| || ||||| Sbjct: 1679 tttatgatagtgattggaatcctcagtctgatcttcaggcccaaga 1724
>ref|XM_854149.1| PREDICTED: Canis familiaris similar to helicase, lymphoid-specific, transcript variant 3 (LOC486809), mRNA Length = 1161 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagctcaaga 222 ||||||||||||| |||||||| || |||||||||| || ||||| Sbjct: 977 tttatgatagtgattggaatcctcagtctgatcttcaggcccaaga 1022
>ref|XM_543938.2| PREDICTED: Canis familiaris similar to helicase, lymphoid-specific, transcript variant 1 (LOC486809), mRNA Length = 2979 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagctcaaga 222 ||||||||||||| |||||||| || |||||||||| || ||||| Sbjct: 2069 tttatgatagtgattggaatcctcagtctgatcttcaggcccaaga 2114
>ref|XM_751805.1| Ustilago maydis 521 hypothetical protein (UM00751.1) partial mRNA Length = 5733 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 116 ttgctttcaaccagggctggtggacttggtatcaacct 153 ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 4951 ttgctgtcaactagggcgggtggactgggtatcaacct 4988
>ref|XM_447820.1| Candida glabrata CBS138, CAGL0J02662g partial mRNA Length = 2535 Score = 44.1 bits (22), Expect = 0.54 Identities = 85/106 (80%) Strand = Plus / Plus Query: 111 ttttcttgctttcaaccagggctggtggacttggtatcaaccttgccactgctgatgttg 170 ||||||||||||| || || || | ||| |||||||| ||||||| |||| ||| || Sbjct: 1997 ttttcttgctttcgacaagagcagctggtcttggtattaaccttgtagctgcagatactg 2056 Query: 171 tgattctttatgatagtgactggaatccacaagctgatcttcaagc 216 ||||| ||| ||||||||| ||||| || || | |||||| ||||| Sbjct: 2057 tgattatttttgatagtgattggaaccctcaggttgatctccaagc 2102
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 44.1 bits (22), Expect = 0.54 Identities = 85/106 (80%) Strand = Plus / Plus Query: 111 ttttcttgctttcaaccagggctggtggacttggtatcaaccttgccactgctgatgttg 170 ||||||||||||| || || || | ||| |||||||| ||||||| |||| ||| || Sbjct: 263905 ttttcttgctttcgacaagagcagctggtcttggtattaaccttgtagctgcagatactg 263964 Query: 171 tgattctttatgatagtgactggaatccacaagctgatcttcaagc 216 ||||| ||| ||||||||| ||||| || || | |||||| ||||| Sbjct: 263965 tgattatttttgatagtgattggaaccctcaggttgatctccaagc 264010
>gb|AF292095.2|AF292095 Xenopus laevis imitation switch ISWI (ISWI) mRNA, complete cds Length = 3572 Score = 44.1 bits (22), Expect = 0.54 Identities = 52/62 (83%) Strand = Plus / Plus Query: 152 cttgccactgctgatgttgtgattctttatgatagtgactggaatccacaagctgatctt 211 ||||| |||||||||||||| ||| | |||||| ||||||||||| |||| ||| ||| Sbjct: 1787 cttgctactgctgatgttgttattatatatgattcagactggaatccgcaagttgacctt 1846 Query: 212 ca 213 || Sbjct: 1847 ca 1848
>dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487E11 Length = 151303 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 582 ttgatggtgataaggaggaaga 603 |||||||||||||||||||||| Sbjct: 97385 ttgatggtgataaggaggaaga 97406
>gb|AY108625.1| Zea mays PCO087393 mRNA sequence Length = 966 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 129 gggctggtggacttggtatcaacctt 154 ||||||| |||||||||||||||||| Sbjct: 36 gggctggcggacttggtatcaacctt 61
>gb|AY726636.1| Xenopus laevis Brg1 mRNA, complete cds Length = 5031 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgatagtgactggaatccaca 201 ||||||||||||||||||||| Sbjct: 3575 tgatagtgactggaatccaca 3595
>ref|XM_629430.1| Dictyostelium discoideum hypothetical protein (DDB0215535), partial mRNA Length = 3666 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 181 tgatagtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggatagg 240 ||||||||| ||||| |||||| ||||||||||| ||||| ||||| ||| | || || Sbjct: 2025 tgatagtgattggaacccacaaatggatcttcaagcacaagatcgtgcccatcgtattgg 2084 Query: 241 tcaaa 245 ||||| Sbjct: 2085 tcaaa 2089
>ref|XM_629259.1| Dictyostelium discoideum hypothetical protein (DDB0220643), partial mRNA Length = 9216 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 173 attctttatgatagtgactggaatccacaagctgatcttcaagctcaag 221 ||||||| |||||||| |||||||||||| | ||| | |||||||||| Sbjct: 3904 attcttttcgatagtgattggaatccacaatcagatttacaagctcaag 3952
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 agtttgttttcttgctttcaa 125 ||||||||||||||||||||| Sbjct: 107904 agtttgttttcttgctttcaa 107884
>ref|XM_860493.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 19 (LOC481046), mRNA Length = 3969 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860476.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 18 (LOC481046), mRNA Length = 3948 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860458.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 17 (LOC481046), mRNA Length = 3993 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860441.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 16 (LOC481046), mRNA Length = 3960 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860421.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 15 (LOC481046), mRNA Length = 3924 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860402.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 14 (LOC481046), mRNA Length = 3993 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860387.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 13 (LOC481046), mRNA Length = 3990 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860371.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 12 (LOC481046), mRNA Length = 3924 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860351.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 11 (LOC481046), mRNA Length = 4008 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860336.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 10 (LOC481046), mRNA Length = 4033 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1848 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1907 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1908 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1967 Query: 245 aagaa 249 ||||| Sbjct: 1968 aagaa 1972
>ref|XM_860314.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 9 (LOC481046), mRNA Length = 3963 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1800 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1859 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1860 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1919 Query: 245 aagaa 249 ||||| Sbjct: 1920 aagaa 1924
>ref|XM_860300.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 8 (LOC481046), mRNA Length = 3798 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1644 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1703 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1704 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1763 Query: 245 aagaa 249 ||||| Sbjct: 1764 aagaa 1768
>ref|XM_538168.2| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 1 (LOC481046), mRNA Length = 4114 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1860 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1919 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1920 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1979 Query: 245 aagaa 249 ||||| Sbjct: 1980 aagaa 1984
>ref|XM_860270.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 7 (LOC481046), mRNA Length = 4051 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1797 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1856 Query: 185 agtgactggaatccacaagctgatcttcaagct 217 |||||||||||||| | |||||| |||||| Sbjct: 1857 tcagactggaatccacaggttgatctacaagct 1889
>ref|XM_860253.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 6 (LOC481046), mRNA Length = 3960 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1806 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1865 Query: 185 agtgactggaatccacaagctgatcttcaagct 217 |||||||||||||| | |||||| |||||| Sbjct: 1866 tcagactggaatccacaggttgatctacaagct 1898
>ref|XM_860237.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 5 (LOC481046), mRNA Length = 4047 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860219.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 4 (LOC481046), mRNA Length = 4009 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860203.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 3 (LOC481046), mRNA Length = 3978 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1824 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1883 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1884 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1943 Query: 245 aagaa 249 ||||| Sbjct: 1944 aagaa 1948
>ref|XM_860185.1| PREDICTED: Canis familiaris similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a, transcript variant 2 (LOC481046), mRNA Length = 4014 Score = 42.1 bits (21), Expect = 2.1 Identities = 99/125 (79%) Strand = Plus / Plus Query: 125 accagggctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgat 184 ||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||||| Sbjct: 1860 accagagctggaggtcttggaattaacctggcaagtgctgatgtggttatactatatgat 1919 Query: 185 agtgactggaatccacaagctgatcttcaagctcaagaccgtgcacataggataggtcaa 244 |||||||||||||| | |||||| |||||| || || |||||| | || |||||| Sbjct: 1920 tcagactggaatccacaggttgatctacaagctatggatcgagcacatcgtattggtcaa 1979 Query: 245 aagaa 249 ||||| Sbjct: 1980 aagaa 1984
>gb|AY062187.1|AY062187S1 Oryza sativa (indica cultivar-group) chromatin-remodeling factor CHD3 (PKL) gene, exons 1 through 26 Length = 13785 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 ctttcaaccagggctggtggacttggtat 147 ||||||||||| |||||||| |||||||| Sbjct: 8405 ctttcaaccagagctggtggtcttggtat 8433
>gb|AC107664.8| Mus musculus chromosome 17, clone RP23-103F2, complete sequence Length = 208198 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 agaagtttgttttcttgcttt 122 ||||||||||||||||||||| Sbjct: 21077 agaagtttgttttcttgcttt 21057
>gb|AC126942.4| Mus musculus BAC clone RP23-174P9 from chromosome 17, complete sequence Length = 182423 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 agaagtttgttttcttgcttt 122 ||||||||||||||||||||| Sbjct: 144442 agaagtttgttttcttgcttt 144422
>emb|Z68341.1|CEF01G4 Caenorhabditis elegans Cosmid F01G4, complete sequence Length = 20891 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 215 gctcaagaccgtgcacataggataggtcaaaagaaagaagt 255 |||||||| ||||||||| | || || |||||||||||||| Sbjct: 1333 gctcaagatcgtgcacatcgtatcggacaaaagaaagaagt 1373
>ref|XM_650658.1| Entamoeba histolytica HM-1:IMSS prefoldin subunit 6 (23.t00055) partial mRNA Length = 360 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 aagctgatcttcaagctcaag 221 ||||||||||||||||||||| Sbjct: 275 aagctgatcttcaagctcaag 295
>ref|NM_069681.3| Caenorhabditis elegans Phasmid Socket Absent family member (psa-4) (psa-4) mRNA, complete cds Length = 4821 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 215 gctcaagaccgtgcacataggataggtcaaaagaaagaagt 255 |||||||| ||||||||| | || || |||||||||||||| Sbjct: 2918 gctcaagatcgtgcacatcgtatcggacaaaagaaagaagt 2958
>gb|AY762376.1| Xenopus laevis Brg1 (Brg1) mRNA, complete cds Length = 5487 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgatagtgactggaatccaca 201 ||||||||||||||||||||| Sbjct: 3588 tgatagtgactggaatccaca 3608
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 119 ctttcaaccagggctggtggacttggtat 147 ||||||||||| |||||||| |||||||| Sbjct: 4187689 ctttcaaccagagctggtggtcttggtat 4187661
>gb|AF230280.1|AF230280 Caenorhabditis elegans SWI2/SNF2-like protein (psa-4) mRNA, complete cds Length = 4773 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 215 gctcaagaccgtgcacataggataggtcaaaagaaagaagt 255 |||||||| ||||||||| | || || |||||||||||||| Sbjct: 2916 gctcaagatcgtgcacatcgtatcggacaaaagaaagaagt 2956
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 119 ctttcaaccagggctggtggacttggtat 147 ||||||||||| |||||||| |||||||| Sbjct: 32910 ctttcaaccagagctggtggtcttggtat 32882
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0036B04 Length = 136159 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 119 ctttcaaccagggctggtggacttggtat 147 ||||||||||| |||||||| |||||||| Sbjct: 120948 ctttcaaccagagctggtggtcttggtat 120920
>dbj|AK174603.1| Ciona intestinalis cDNA, clone:cigd005p10, full insert sequence Length = 3000 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 168 ttgtgattctttatgatagtgactggaatccacaagctgat 208 |||||||||| | |||||||| ||||||||||||| |||| Sbjct: 1596 ttgtgattctgttcgatagtgattggaatccacaagttgat 1636
>ref|NM_126926.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ DNA binding / chromatin binding / helicase/ nucleic acid binding AT2G13370 mRNA, complete cds Length = 5932 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgat 166 ||||||||||| |||||||| || || ||||||||| Sbjct: 3386 gctggtggactgggtatcaatctggctactgctgat 3421
>ref|XM_633250.1| Dictyostelium discoideum hypothetical protein (DDB0218679), partial mRNA Length = 4923 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 191 tggaatccacaagctgatcttcaagctcaaga 222 |||||||||||| ||||||||||||||||| Sbjct: 3214 tggaatccacaaatggatcttcaagctcaaga 3245
>ref|XM_631739.1| Dictyostelium discoideum hypothetical protein (DDB0187821), partial mRNA Length = 5865 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 575 tatgattttgatggtgataa 594 |||||||||||||||||||| Sbjct: 3793 tatgattttgatggtgataa 3812
>ref|XM_467230.1| Oryza sativa (japonica cultivar-group), mRNA Length = 6066 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tatgatagtgactggaatcc 198 |||||||||||||||||||| Sbjct: 3445 tatgatagtgactggaatcc 3464
>gb|AC102638.13| Mus musculus chromosome 3, clone RP23-406D2, complete sequence Length = 172817 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 atgacactgctgaattgtat 577 |||||||||||||||||||| Sbjct: 140636 atgacactgctgaattgtat 140655
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete sequence Length = 249995 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 584 gatggtgataaggaggaagacaat 607 |||| ||||||||||||||||||| Sbjct: 183439 gatgatgataaggaggaagacaat 183416
>gb|BC077794.1| Xenopus laevis HELLS protein, mRNA (cDNA clone IMAGE:5154772), partial cds Length = 2323 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagc 216 ||||||||||||| |||||||| || ||||| || ||||| Sbjct: 2136 tttatgatagtgattggaatccccaggctgacctacaagc 2175
>ref|XM_423281.1| PREDICTED: Gallus gallus similar to speckle-type POZ protein (LOC425528), mRNA Length = 1127 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 gctaaaggagaagagacaaaagca 502 |||||||||||||| ||||||||| Sbjct: 539 gctaaaggagaagaaacaaaagca 562
>ref|NM_053124.2| Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (Smarca5), mRNA Length = 4658 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | ||||| || Sbjct: 2041 gctggtggtctgggcatcaatcttgcaactgctgatgtagtcattttatatgactcagat 2100 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| ||||||||| ||| |||||||| ||||| Sbjct: 2101 tggaatccgcaagttgatcttcaggctatggaccgtgcccatag 2144
>ref|XM_454131.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E04048g predicted mRNA Length = 2481 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 185 agtgactggaatccacaagctgatcttcaagc 216 ||||||||||| ||||||| |||||| ||||| Sbjct: 2002 agtgactggaacccacaagttgatctccaagc 2033
>gb|AC113022.7| Mus musculus chromosome 5, clone RP23-187D22, complete sequence Length = 210968 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 tgatggtgataaggaggaag 602 |||||||||||||||||||| Sbjct: 154774 tgatggtgataaggaggaag 154793
>ref|XR_004577.1| PREDICTED: Mus musculus RIKEN cDNA 9230115A19 gene (9230115A19Rik), misc RNA Length = 4162 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | ||||| || Sbjct: 1564 gctggtggtctgggcatcaatcttgcaactgctgatgtagtcattttatatgactcagat 1623 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| ||||||||| ||| |||||||| ||||| Sbjct: 1624 tggaatccgcaagttgatcttcaggctatggaccgtgcccatag 1667
>ref|XM_984446.1| PREDICTED: Mus musculus similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (LOC675704), mRNA Length = 4123 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | ||||| || Sbjct: 1525 gctggtggtctgggcatcaatcttgcaactgctgatgtagtcattttatatgactcagat 1584 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| ||||||||| ||| |||||||| ||||| Sbjct: 1585 tggaatccgcaagttgatcttcaggctatggaccgtgcccatag 1628
>ref|XM_823525.1| Trypanosoma brucei TREU927 DNA repair/recombination protein RAD54 (Tb11.02.3110) partial mRNA Length = 3114 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 108 ttgttttcttgctttcaaccagggctggtgga 139 |||||||||||||||| ||| |||||||||| Sbjct: 2312 ttgttttcttgctttcttccaaggctggtgga 2343
>gb|AC129304.6| Mus musculus BAC clone RP24-462H23 from chromosome 10, complete sequence Length = 153772 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gtcaaaagaaagaagtccaagttt 263 |||||||||||||| ||||||||| Sbjct: 90107 gtcaaaagaaagaactccaagttt 90130
>gb|AC122018.4| Mus musculus BAC clone RP24-361O20 from chromosome 10, complete sequence Length = 173543 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gtcaaaagaaagaagtccaagttt 263 |||||||||||||| ||||||||| Sbjct: 23863 gtcaaaagaaagaactccaagttt 23886
>gb|AC122856.3| Mus musculus BAC clone RP23-121N19 from 3, complete sequence Length = 187311 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 atgacactgctgaattgtat 577 |||||||||||||||||||| Sbjct: 175946 atgacactgctgaattgtat 175927
>gb|AC114827.4| Mus musculus BAC clone RP24-447F21 from 13, complete sequence Length = 157432 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 attaagtttaaaatggatga 561 |||||||||||||||||||| Sbjct: 72575 attaagtttaaaatggatga 72594
>gb|AC116142.8| Mus musculus chromosome 5, clone RP23-140B23, complete sequence Length = 187461 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 tgatggtgataaggaggaag 602 |||||||||||||||||||| Sbjct: 158590 tgatggtgataaggaggaag 158571
>emb|AL513328.12| Human DNA sequence from clone RP13-461N9 on chromosome 9 Contains the 5' end of the MUSK gene for muscle, skeletal, receptor tyrosine kinase and a ribosomal protein S21 (RPS21) pseudogene, complete sequence Length = 126999 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 cattggatgctttggttatt 346 |||||||||||||||||||| Sbjct: 98168 cattggatgctttggttatt 98149
>emb|AL512307.12| Human DNA sequence from clone RP11-285B6 on chromosome 1 Contains part of the RGS7 gene for regulator of G-protein signalling 7, complete sequence Length = 182323 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gtttgttttcttgctttcaa 125 |||||||||||||||||||| Sbjct: 66616 gtttgttttcttgctttcaa 66635
>emb|AL441884.5| Human DNA sequence from clone RP11-19A22 on chromosome 9 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 137783 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 catttaacaaaccaggaagt 100 |||||||||||||||||||| Sbjct: 124792 catttaacaaaccaggaagt 124811
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 185 agtgactggaatccacaagctgatcttcaagc 216 ||||||||||| ||||||| |||||| ||||| Sbjct: 378000 agtgactggaacccacaagttgatctccaagc 378031
>gb|BC053069.1| Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, mRNA (cDNA clone MGC:62411 IMAGE:6409140), complete cds Length = 4658 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | ||||| || Sbjct: 2041 gctggtggtctgggcatcaatcttgcaactgctgatgtagtcattttatatgactcagat 2100 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| ||||||||| ||| |||||||| ||||| Sbjct: 2101 tggaatccgcaagttgatcttcaggctatggaccgtgcccatag 2144
>gb|AC087116.13| Mus Musculus Strain C57BL6/J Chromosome 15~RP23-336B1, complete sequence Length = 218476 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 caaccttgccactgctgatg 167 |||||||||||||||||||| Sbjct: 100625 caaccttgccactgctgatg 100644
>gb|AC099541.2| Homo sapiens chromosome 3 clone RP11-520A21, complete sequence Length = 187072 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 caaaccaggaagtgagaagt 107 |||||||||||||||||||| Sbjct: 50907 caaaccaggaagtgagaagt 50926
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gagagcgtacaagaagcttg 326 |||||||||||||||||||| Sbjct: 488896 gagagcgtacaagaagcttg 488915
>gb|AC007209.6| Arabidopsis thaliana chromosome 2 clone F14O4 map PR1, complete sequence Length = 55345 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgat 166 ||||||||||| |||||||| || || ||||||||| Sbjct: 39139 gctggtggactgggtatcaatctggctactgctgat 39174
>gb|AC104189.2| Homo sapiens chromosome 3 clone RP11-465K13, complete sequence Length = 179322 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caaaccaggaagtgagaagt 107 |||||||||||||||||||| Sbjct: 5730 caaaccaggaagtgagaagt 5711
>dbj|AK157142.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830204H23 product:Warning: possibly chimeric clone, full insert sequence Length = 2885 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | ||||| || Sbjct: 714 gctggtggtctgggcatcaatcttgcaactgctgatgtagtcattttatatgactcagat 773 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| ||||||||| ||| |||||||| ||||| Sbjct: 774 tggaatccgcaagttgatcttcaggctatggaccgtgcccatag 817
>dbj|AK153789.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630093L23 product:unclassifiable, full insert sequence Length = 3293 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | ||||| || Sbjct: 2359 gctggtggtctgggcatcaatcttgcaactgctgatgtagtcattttatatgactcagat 2418 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| ||||||||| ||| |||||||| ||||| Sbjct: 2419 tggaatccgcaagttgatcttcaggctatggaccgtgcccatag 2462
>gb|AF375046.1|AF375046 Mus musculus ATP-dependent chromatin remodeling protein SNF2H mRNA, complete cds Length = 3470 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | ||||| || Sbjct: 1760 gctggtggtctgggcatcaatcttgcaactgctgatgtagtcattttatatgactcagat 1819 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| ||||||||| ||| |||||||| ||||| Sbjct: 1820 tggaatccgcaagttgatcttcaggctatggaccgtgcccatag 1863
>dbj|AK221299.1| Arabidopsis thaliana mRNA for pseudogene, partial cds, clone: RAFL24-27-A16 Length = 4006 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgat 166 ||||||||||| |||||||| || || ||||||||| Sbjct: 3392 gctggtggactgggtatcaatctggctactgctgat 3427
>gb|BC097562.1| Xenopus laevis HELLS protein, mRNA (cDNA clone MGC:114701 IMAGE:6632371), complete cds Length = 2915 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 177 tttatgatagtgactggaatccacaagctgatcttcaagc 216 ||||||||||||| |||||||| || ||||| || ||||| Sbjct: 2135 tttatgatagtgattggaatccccaggctgacctacaagc 2174
>dbj|AK039811.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430004L17 product:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, full insert sequence Length = 836 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | ||||| || Sbjct: 362 gctggtggtctgggcatcaatcttgcaactgctgatgtagtcattttatatgactcagat 421 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| ||||||||| ||| |||||||| ||||| Sbjct: 422 tggaatccgcaagttgatcttcaggctatggaccgtgcccatag 465
>gb|AF325921.1|AF325921 Mus musculus DNA-dependent ATPase SNF2H (Snf2h) mRNA, complete cds Length = 3864 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 131 gctggtggacttggtatcaaccttgccactgctgatgttgtgattctttatgatagtgac 190 |||||||| || || ||||| ||||| ||||||||||| || ||| | ||||| || Sbjct: 1693 gctggtggtctgggcatcaatcttgcaactgctgatgtagtcattttatatgactcagat 1752 Query: 191 tggaatccacaagctgatcttcaagctcaagaccgtgcacatag 234 |||||||| |||| ||||||||| ||| |||||||| ||||| Sbjct: 1753 tggaatccgcaagttgatcttcaggctatggaccgtgcccatag 1796
>gb|AC025519.10|AC025519 Homo sapiens, clone RP11-484J3, complete sequence Length = 171464 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 594 aggaggaagacaatgctgat 613 |||||||||||||||||||| Sbjct: 53535 aggaggaagacaatgctgat 53554
>ref|XM_396195.2| PREDICTED: Apis mellifera similar to ENSANGP00000016886 (LOC412742), mRNA Length = 3060 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gttattcaacaaggacgatt 360 |||||||||||||||||||| Sbjct: 1774 gttattcaacaaggacgatt 1793
>ref|XM_396241.2| PREDICTED: Apis mellifera similar to ENSANGP00000010275 (LOC412788), partial mRNA Length = 1625 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 tgtatgattttgatggtgat 592 |||||||||||||||||||| Sbjct: 815 tgtatgattttgatggtgat 834
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tatgatagtgactggaatcc 198 |||||||||||||||||||| Sbjct: 28317792 tatgatagtgactggaatcc 28317773
>gb|AC013414.7| Homo sapiens BAC clone RP11-560I3 from 2, complete sequence Length = 161390 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 aaggaggaagacaatgctga 612 |||||||||||||||||||| Sbjct: 56238 aaggaggaagacaatgctga 56219
>gb|AC093400.5| Homo sapiens BAC clone RP11-8M15 from 2, complete sequence Length = 17890 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 448 aataacagatgaggatgttgacagaatt 475 |||||||||||||| || |||||||||| Sbjct: 2290 aataacagatgaggctgctgacagaatt 2317
>gb|AC074239.5| Homo sapiens BAC clone CTD-2011N5 from 2, complete sequence Length = 129738 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 aaaccaggaagtgagaagtttgttttct 116 |||| ||||||||| ||||||||||||| Sbjct: 87608 aaacaaggaagtgaaaagtttgttttct 87635
>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1743_B12 Length = 175645 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tatgatagtgactggaatcc 198 |||||||||||||||||||| Sbjct: 109549 tatgatagtgactggaatcc 109530
>dbj|AK120785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010H23, full insert sequence Length = 3578 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tatgatagtgactggaatcc 198 |||||||||||||||||||| Sbjct: 582 tatgatagtgactggaatcc 601
>gb|DQ141332.1| Morone saxatilis subclone lambdaMs15 truncated FBP32II and FBP32 genes, complete cds Length = 14985 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 agtataccattgaggaaaaagtga 302 ||||||| |||||||||||||||| Sbjct: 6070 agtatacaattgaggaaaaagtga 6093
>emb|AL671988.15| Mouse DNA sequence from clone RP23-165J1 on chromosome X, complete sequence Length = 164068 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atagctaaaggagaagagac 495 |||||||||||||||||||| Sbjct: 139148 atagctaaaggagaagagac 139167 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,505,169 Number of Sequences: 3902068 Number of extensions: 6505169 Number of successful extensions: 125482 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 167 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 124845 Number of HSP's gapped (non-prelim): 629 length of query: 617 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 594 effective length of database: 17,143,297,704 effective search space: 10183118836176 effective search space used: 10183118836176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
