| Clone Name | bags26c23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119298.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E09, full insert sequence Length = 3025 Score = 708 bits (357), Expect = 0.0 Identities = 600/681 (88%) Strand = Plus / Plus Query: 11 gcaaaccgttacccttttcctgaagaccttgctaaacaaacacatactgttcaggaggta 70 ||||| || ||||| ||||| ||||| |||||| |||| |||| |||||||||||||| Sbjct: 981 gcaaatcgctacccatttccagaagatgttgctagacaattacatgctgttcaggaggta 1040 Query: 71 gctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtgacagt 130 ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| | Sbjct: 1041 tctgcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtgacaat 1100 Query: 131 atactcaaaactattgcatcagagtttgagcattggaaccatctggcaaagaaggaaaaa 190 ||| | |||| ||| || || ||||||||| ||||||||| ||||||||| ||||||||| Sbjct: 1101 atattgaaaaatatcgcgtctgagtttgagaattggaaccgtctggcaaataaggaaaaa 1160 Query: 191 tcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaaatgcttagttggt 250 ||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 1161 ataatttaccacactttgaacatgttgagtgttgatgtgacaaagaaatgcttagttggt 1220 Query: 251 gagggctggagtccagttttcgcaactaatcaggttcaggatgcacttcagcgtgctact 310 |||||||||||||||||||| ||||| | |||| | || ||||| || ||||| |||||| Sbjct: 1221 gagggctggagtccagtttttgcaacaactcagatccaagatgcgctccagcgagctact 1280 Query: 311 cttgagagcaagtcccaagttggctcgatttttcaggttcttaacacaaaagagtctcct 370 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||| ||| ||||| Sbjct: 1281 cttgatagcaaatcccaagttggttcaatttttcaagttctcaacacaacagaatctccc 1340 Query: 371 ccaacatatttccagacaaacaaatttacctcagcattccaggaaattgtcgacgcatat 430 || ||||||||||||||||| || || || || || |||||||||||||| || ||||| Sbjct: 1341 ccgacatatttccagacaaataagttcacttcggctttccaggaaattgttgatgcatac 1400 Query: 431 ggggtagccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttc 490 ||| ||||||| ||||||||||| || |||||||||| ||||||| |||||||||||||| Sbjct: 1401 gggatagccaaatatcaagaagcaaaccctggtgtattcactattgtcacttttcctttc 1460 Query: 491 ttattcgctgtcatgtttggagattggggtcatggaatctgcatattacttgcaacactc 550 ||||| ||||||||||||||||||||||| |||||||| |||||||| || | |||||| Sbjct: 1461 ttatttgctgtcatgtttggagattggggacatggaatttgcatattggtttcgacactc 1520 Query: 551 tatctgataatccgagagaagaaattcgcttcacagaaacttggagacataatggagatg 610 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1521 tatctgataatccgagagaagaaatttgcttcacagaaacttggagacataatggagatg 1580 Query: 611 atgtttggaggccgctacataattatgatgatgtcaattttctcaatctacacaggatta 670 |||||||| || ||||| ||||||| |||||| || | || |||||||| ||||||||| Sbjct: 1581 atgtttggtgggcgctatgtaattataatgatggcactcttttcaatctatacaggatta 1640 Query: 671 atatacaatgaatttttctct 691 ||||||||||||||||||||| Sbjct: 1641 atatacaatgaatttttctct 1661
>dbj|AK101151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027C12, full insert sequence Length = 3018 Score = 708 bits (357), Expect = 0.0 Identities = 600/681 (88%) Strand = Plus / Plus Query: 11 gcaaaccgttacccttttcctgaagaccttgctaaacaaacacatactgttcaggaggta 70 ||||| || ||||| ||||| ||||| |||||| |||| |||| |||||||||||||| Sbjct: 974 gcaaatcgctacccatttccagaagatgttgctagacaattacatgctgttcaggaggta 1033 Query: 71 gctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtgacagt 130 ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| | Sbjct: 1034 tctgcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtgacaat 1093 Query: 131 atactcaaaactattgcatcagagtttgagcattggaaccatctggcaaagaaggaaaaa 190 ||| | |||| ||| || || ||||||||| ||||||||| ||||||||| ||||||||| Sbjct: 1094 atattgaaaaatatcgcgtctgagtttgagaattggaaccgtctggcaaataaggaaaaa 1153 Query: 191 tcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaaatgcttagttggt 250 ||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 1154 ataatttaccacactttgaacatgttgagtgttgatgtgacaaagaaatgcttagttggt 1213 Query: 251 gagggctggagtccagttttcgcaactaatcaggttcaggatgcacttcagcgtgctact 310 |||||||||||||||||||| ||||| | |||| | || ||||| || ||||| |||||| Sbjct: 1214 gagggctggagtccagtttttgcaacaactcagatccaagatgcgctccagcgagctact 1273 Query: 311 cttgagagcaagtcccaagttggctcgatttttcaggttcttaacacaaaagagtctcct 370 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||| ||| ||||| Sbjct: 1274 cttgatagcaaatcccaagttggttcaatttttcaagttctcaacacaacagaatctccc 1333 Query: 371 ccaacatatttccagacaaacaaatttacctcagcattccaggaaattgtcgacgcatat 430 || ||||||||||||||||| || || || || || |||||||||||||| || ||||| Sbjct: 1334 ccgacatatttccagacaaataagttcacttcggctttccaggaaattgttgatgcatac 1393 Query: 431 ggggtagccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttc 490 ||| ||||||| ||||||||||| || |||||||||| ||||||| |||||||||||||| Sbjct: 1394 gggatagccaaatatcaagaagcaaaccctggtgtattcactattgtcacttttcctttc 1453 Query: 491 ttattcgctgtcatgtttggagattggggtcatggaatctgcatattacttgcaacactc 550 ||||| ||||||||||||||||||||||| |||||||| |||||||| || | |||||| Sbjct: 1454 ttatttgctgtcatgtttggagattggggacatggaatttgcatattggtttcgacactc 1513 Query: 551 tatctgataatccgagagaagaaattcgcttcacagaaacttggagacataatggagatg 610 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1514 tatctgataatccgagagaagaaatttgcttcacagaaacttggagacataatggagatg 1573 Query: 611 atgtttggaggccgctacataattatgatgatgtcaattttctcaatctacacaggatta 670 |||||||| || ||||| ||||||| |||||| || | || |||||||| ||||||||| Sbjct: 1574 atgtttggtgggcgctatgtaattataatgatggcactcttttcaatctatacaggatta 1633 Query: 671 atatacaatgaatttttctct 691 ||||||||||||||||||||| Sbjct: 1634 atatacaatgaatttttctct 1654
>ref|NM_195204.1| Oryza sativa (japonica cultivar-group) putative proton pump (OSJNBa0029P16.14), mRNA Length = 2352 Score = 462 bits (233), Expect = e-127 Identities = 575/689 (83%) Strand = Plus / Plus Query: 2 gcttttcgtgcaaaccgttacccttttcctgaagaccttgctaaacaaacacatactgtt 61 |||||| |||| ||||||||||| ||||| ||||| || | ||||| || ||| || Sbjct: 667 gcttttggtgccaaccgttacccatttccagaagatctaggcaaacagctgcagactatt 726 Query: 62 caggaggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcat 121 ||||||||| ||||||| ||||||||||| |||||||| ||||| || || |||||||| Sbjct: 727 caggaggtatctggaaaaatatcagagttgaaggcaactattgaaataggtttagctcac 786 Query: 122 cgtgacagtatactcaaaactattgcatcagagtttgagcattggaaccatctggcaaag 181 |||||||| ||||| |||| |||| | || ||||||||||| |||||| |||| |||| Sbjct: 787 cgtgacagcatacttaaaaatatttcttccgagtttgagcaatggaacaccctggtaaag 846 Query: 182 aaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaaatgc 241 || |||||| | ||||||||||| | ||||||||||| |||||||||| ||||||||| Sbjct: 847 aaagaaaaagctatttaccacacattaaacatgttgagtcttgatgtgacaaagaaatgc 906 Query: 242 ttagttggtgagggctggagtccagttttcgcaactaatcaggttcaggatgcacttcag 301 || |||| |||||| |||||||| || || ||||| | |||| | || |||||||||||| Sbjct: 907 ttggttgctgagggatggagtccggtgtttgcaacaagtcagatccaagatgcacttcag 966 Query: 302 cgtgctactcttgagagcaagtcccaagttggctcgatttttcaggttcttaacacaaaa 361 ||||||||| |||| ||||| ||||||||||| || ||||| || ||||| |||||| || Sbjct: 967 cgtgctactgttgatagcaaatcccaagttggttcaattttccaagttctcaacacacaa 1026 Query: 362 gagtctcctccaacatatttccagacaaacaaatttacctcagcattccaggaaattgtc 421 || ||||||||||||| |||||||||||| |||||||| || ||||||||||| ||||| Sbjct: 1027 gaatctcctccaacatttttccagacaaataaatttacttctgcattccaggagattgtg 1086 Query: 422 gacgcatatggggtagccaagtatcaagaagcgaatcctggtgtatacactattatcact 481 || || |||||| | ||||||||||||||||||||||||||||| | || ||| | || Sbjct: 1087 gatgcctatgggattgccaagtatcaagaagcgaatcctggtgtctttaccattgtaaca 1146 Query: 482 tttcctttcttattcgctgtcatgtttggagattggggtcatggaatctgcatattactt 541 |||||||||||||| ||| ||||||| ||||| ||||| |||||||| || || ||||| Sbjct: 1147 tttcctttcttatttgctatcatgttcggagactggggccatggaatttgtttactactt 1206 Query: 542 gcaacactctatctgataatccgagagaagaaattcgcttcacagaaacttggagacata 601 |||||||| || || |||||| |||||||||| | |||||||||||||| | || ||| Sbjct: 1207 gcaacactgtacctcataatcagagagaagaagctagcttcacagaaactggatgatata 1266 Query: 602 atggagatgatgtttggaggccgctacataattatgatgatgtcaattttctcaatctac 661 ||||| ||||||||||| || |||||| | ||| ||||||||||| | || ||||| ||| Sbjct: 1267 atggatatgatgtttggtggtcgctacgtgattttgatgatgtcactcttttcaatttac 1326 Query: 662 acaggattaatatacaatgaatttttctc 690 || || || |||||||| ||||||||||| Sbjct: 1327 actgggttgatatacaacgaatttttctc 1355
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 435 tagccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttcttat 494 ||||||| ||||||||||| || |||||||||| ||||||| |||||||||||||||||| Sbjct: 7957983 tagccaaatatcaagaagcaaaccctggtgtattcactattgtcacttttcctttcttat 7958042 Query: 495 tcgctgtcatgtttggagattggggtcatggaatctgcatattacttgcaacactctatc 554 | ||||||||||||||||||||||| |||||||| |||||||| || | |||||||||| Sbjct: 7958043 ttgctgtcatgtttggagattggggacatggaatttgcatattggtttcgacactctatc 7958102 Query: 555 tgataatccgagagaagaaattcgcttcacag 586 |||||||||||||||||||||| ||||||||| Sbjct: 7958103 tgataatccgagagaagaaatttgcttcacag 7958134 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 175 ggcaaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaa 234 |||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||| || Sbjct: 7957030 ggcaaataaggaaaaaataatttaccacactttgaacatgttgagtgttgatgtgacaaa 7957089 Query: 235 gaaatgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 285 |||||||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 7957090 gaaatgcttagttggtgagggctggagtccagtttttgcaacaactcaggt 7957140 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgatg 643 ||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||||| Sbjct: 7958305 cagaaacttggagacataatggagatgatgtttggtgggcgctatgtaattataatgatg 7958364 Query: 644 tcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 || | || |||||||| |||||||||||||||||||||||||||||| Sbjct: 7958365 gcactcttttcaatctatacaggattaatatacaatgaatttttctct 7958412 Score = 117 bits (59), Expect = 5e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 66 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 125 ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 7956806 aggtatctgcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtg 7956865 Query: 126 acagtatactcaaaactattgcatcagagtttgagcattggaaccatctgg 176 ||| |||| | |||| ||| || || ||||||||| ||||||||| ||||| Sbjct: 7956866 acaatatattgaaaaatatcgcgtctgagtttgagaattggaaccgtctgg 7956916 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 290 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 349 ||||| || ||||| ||||||||||| ||||| ||||||||||| || |||||||| ||| Sbjct: 7957257 gatgcgctccagcgagctactcttgatagcaaatcccaagttggttcaatttttcaagtt 7957316 Query: 350 cttaacacaaaagagtctcctccaacatatttccagacaaacaaatttacctcagcattc 409 || ||||||| ||| ||||| || ||||||||||||||||| || || || || || ||| Sbjct: 7957317 ctcaacacaacagaatctcccccgacatatttccagacaaataagttcacttcggctttc 7957376 Query: 410 caggaaattgtcgacgcata 429 ||||||||||| || ||||| Sbjct: 7957377 caggaaattgttgatgcata 7957396
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 435 tagccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttcttat 494 ||||||| ||||||||||| || |||||||||| ||||||| |||||||||||||||||| Sbjct: 7955818 tagccaaatatcaagaagcaaaccctggtgtattcactattgtcacttttcctttcttat 7955877 Query: 495 tcgctgtcatgtttggagattggggtcatggaatctgcatattacttgcaacactctatc 554 | ||||||||||||||||||||||| |||||||| |||||||| || | |||||||||| Sbjct: 7955878 ttgctgtcatgtttggagattggggacatggaatttgcatattggtttcgacactctatc 7955937 Query: 555 tgataatccgagagaagaaattcgcttcacag 586 |||||||||||||||||||||| ||||||||| Sbjct: 7955938 tgataatccgagagaagaaatttgcttcacag 7955969 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 175 ggcaaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaa 234 |||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||| || Sbjct: 7954865 ggcaaataaggaaaaaataatttaccacactttgaacatgttgagtgttgatgtgacaaa 7954924 Query: 235 gaaatgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 285 |||||||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 7954925 gaaatgcttagttggtgagggctggagtccagtttttgcaacaactcaggt 7954975 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgatg 643 ||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||||| Sbjct: 7956140 cagaaacttggagacataatggagatgatgtttggtgggcgctatgtaattataatgatg 7956199 Query: 644 tcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 || | || |||||||| |||||||||||||||||||||||||||||| Sbjct: 7956200 gcactcttttcaatctatacaggattaatatacaatgaatttttctct 7956247 Score = 117 bits (59), Expect = 5e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 66 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 125 ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 7954641 aggtatctgcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtg 7954700 Query: 126 acagtatactcaaaactattgcatcagagtttgagcattggaaccatctgg 176 ||| |||| | |||| ||| || || ||||||||| ||||||||| ||||| Sbjct: 7954701 acaatatattgaaaaatatcgcgtctgagtttgagaattggaaccgtctgg 7954751 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 290 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 349 ||||| || ||||| ||||||||||| ||||| ||||||||||| || |||||||| ||| Sbjct: 7955092 gatgcgctccagcgagctactcttgatagcaaatcccaagttggttcaatttttcaagtt 7955151 Query: 350 cttaacacaaaagagtctcctccaacatatttccagacaaacaaatttacctcagcattc 409 || ||||||| ||| ||||| || ||||||||||||||||| || || || || || ||| Sbjct: 7955152 ctcaacacaacagaatctcccccgacatatttccagacaaataagttcacttcggctttc 7955211 Query: 410 caggaaattgtcgacgcata 429 ||||||||||| || ||||| Sbjct: 7955212 caggaaattgttgatgcata 7955231
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 435 tagccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttcttat 494 ||||||| ||||||||||| || |||||||||| ||||||| |||||||||||||||||| Sbjct: 25346 tagccaaatatcaagaagcaaaccctggtgtattcactattgtcacttttcctttcttat 25405 Query: 495 tcgctgtcatgtttggagattggggtcatggaatctgcatattacttgcaacactctatc 554 | ||||||||||||||||||||||| |||||||| |||||||| || | |||||||||| Sbjct: 25406 ttgctgtcatgtttggagattggggacatggaatttgcatattggtttcgacactctatc 25465 Query: 555 tgataatccgagagaagaaattcgcttcacag 586 |||||||||||||||||||||| ||||||||| Sbjct: 25466 tgataatccgagagaagaaatttgcttcacag 25497 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 175 ggcaaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaa 234 |||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||| || Sbjct: 24393 ggcaaataaggaaaaaataatttaccacactttgaacatgttgagtgttgatgtgacaaa 24452 Query: 235 gaaatgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 285 |||||||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 24453 gaaatgcttagttggtgagggctggagtccagtttttgcaacaactcaggt 24503 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgatg 643 ||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||||| Sbjct: 25668 cagaaacttggagacataatggagatgatgtttggtgggcgctatgtaattataatgatg 25727 Query: 644 tcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 || | || |||||||| |||||||||||||||||||||||||||||| Sbjct: 25728 gcactcttttcaatctatacaggattaatatacaatgaatttttctct 25775 Score = 117 bits (59), Expect = 5e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 66 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 125 ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 24169 aggtatctgcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtg 24228 Query: 126 acagtatactcaaaactattgcatcagagtttgagcattggaaccatctgg 176 ||| |||| | |||| ||| || || ||||||||| ||||||||| ||||| Sbjct: 24229 acaatatattgaaaaatatcgcgtctgagtttgagaattggaaccgtctgg 24279 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 290 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 349 ||||| || ||||| ||||||||||| ||||| ||||||||||| || |||||||| ||| Sbjct: 24620 gatgcgctccagcgagctactcttgatagcaaatcccaagttggttcaatttttcaagtt 24679 Query: 350 cttaacacaaaagagtctcctccaacatatttccagacaaacaaatttacctcagcattc 409 || ||||||| ||| ||||| || ||||||||||||||||| || || || || || ||| Sbjct: 24680 ctcaacacaacagaatctcccccgacatatttccagacaaataagttcacttcggctttc 24739 Query: 410 caggaaattgtcgacgcata 429 ||||||||||| || ||||| Sbjct: 24740 caggaaattgttgatgcata 24759
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 435 tagccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttcttat 494 ||||||| ||||||||||| || |||||||||| ||||||| |||||||||||||||||| Sbjct: 143581 tagccaaatatcaagaagcaaaccctggtgtattcactattgtcacttttcctttcttat 143640 Query: 495 tcgctgtcatgtttggagattggggtcatggaatctgcatattacttgcaacactctatc 554 | ||||||||||||||||||||||| |||||||| |||||||| || | |||||||||| Sbjct: 143641 ttgctgtcatgtttggagattggggacatggaatttgcatattggtttcgacactctatc 143700 Query: 555 tgataatccgagagaagaaattcgcttcacag 586 |||||||||||||||||||||| ||||||||| Sbjct: 143701 tgataatccgagagaagaaatttgcttcacag 143732 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 175 ggcaaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaa 234 |||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||| || Sbjct: 142628 ggcaaataaggaaaaaataatttaccacactttgaacatgttgagtgttgatgtgacaaa 142687 Query: 235 gaaatgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 285 |||||||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 142688 gaaatgcttagttggtgagggctggagtccagtttttgcaacaactcaggt 142738 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgatg 643 ||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||||| Sbjct: 143903 cagaaacttggagacataatggagatgatgtttggtgggcgctatgtaattataatgatg 143962 Query: 644 tcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 || | || |||||||| |||||||||||||||||||||||||||||| Sbjct: 143963 gcactcttttcaatctatacaggattaatatacaatgaatttttctct 144010 Score = 117 bits (59), Expect = 5e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 66 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 125 ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 142404 aggtatctgcaaagatatcagagttaaaggcaacaattgacatgggattagcacatcgtg 142463 Query: 126 acagtatactcaaaactattgcatcagagtttgagcattggaaccatctgg 176 ||| |||| | |||| ||| || || ||||||||| ||||||||| ||||| Sbjct: 142464 acaatatattgaaaaatatcgcgtctgagtttgagaattggaaccgtctgg 142514 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 290 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 349 ||||| || ||||| ||||||||||| ||||| ||||||||||| || |||||||| ||| Sbjct: 142855 gatgcgctccagcgagctactcttgatagcaaatcccaagttggttcaatttttcaagtt 142914 Query: 350 cttaacacaaaagagtctcctccaacatatttccagacaaacaaatttacctcagcattc 409 || ||||||| ||| ||||| || ||||||||||||||||| || || || || || ||| Sbjct: 142915 ctcaacacaacagaatctcccccgacatatttccagacaaataagttcacttcggctttc 142974 Query: 410 caggaaattgtcgacgcata 429 ||||||||||| || ||||| Sbjct: 142975 caggaaattgttgatgcata 142994
>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence Length = 173644 Score = 143 bits (72), Expect = 9e-31 Identities = 126/144 (87%) Strand = Plus / Minus Query: 290 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 349 ||||||||||||||||||||| |||| ||||| ||||||||||| || ||||| || ||| Sbjct: 107302 gatgcacttcagcgtgctactgttgatagcaaatcccaagttggttcaattttccaagtt 107243 Query: 350 cttaacacaaaagagtctcctccaacatatttccagacaaacaaatttacctcagcattc 409 || |||||| |||| ||||||||||||| |||||||||||| |||||||| || |||||| Sbjct: 107242 ctcaacacacaagaatctcctccaacatttttccagacaaataaatttacttctgcattc 107183 Query: 410 caggaaattgtcgacgcatatggg 433 ||||| ||||| || || |||||| Sbjct: 107182 caggagattgtggatgcctatggg 107159 Score = 115 bits (58), Expect = 2e-22 Identities = 127/150 (84%) Strand = Plus / Minus Query: 437 gccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttcttattc 496 ||||||||||||||||||||||||||||| | || ||| | || |||||||||||||| Sbjct: 106050 gccaagtatcaagaagcgaatcctggtgtctttaccattgtaacatttcctttcttattt 105991 Query: 497 gctgtcatgtttggagattggggtcatggaatctgcatattacttgcaacactctatctg 556 ||| ||||||| ||||| ||||| |||||||| || || ||||||||||||| || || Sbjct: 105990 gctatcatgttcggagactggggccatggaatttgtttactacttgcaacactgtacctc 105931 Query: 557 ataatccgagagaagaaattcgcttcacag 586 |||||| |||||||||| | ||||||||| Sbjct: 105930 ataatcagagagaagaagctagcttcacag 105901 Score = 87.7 bits (44), Expect = 5e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 66 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 125 ||||| ||||||| ||||||||||| |||||||| ||||| || || |||||||| |||| Sbjct: 107771 aggtatctggaaaaatatcagagttgaaggcaactattgaaataggtttagctcaccgtg 107712 Query: 126 acagtatactcaaaactattgcatcagagtttgagcattggaac 169 |||| ||||| |||| |||| | || ||||||||||| |||||| Sbjct: 107711 acagcatacttaaaaatatttcttccgagtttgagcaatggaac 107668 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Minus Query: 178 aaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaa 237 |||||| |||||| | ||||||||||| | ||||||||||| |||||||||| ||||| Sbjct: 107515 aaagaaagaaaaagctatttaccacacattaaacatgttgagtcttgatgtgacaaagaa 107456 Query: 238 atgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 285 |||||| |||| |||||| |||||||| || || ||||| | |||||| Sbjct: 107455 atgcttggttgctgagggatggagtccggtgtttgcaacaagtcaggt 107408 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 599 ataatggagatgatgtttggaggccgctacataattatgatgatgtcaattttctcaatc 658 |||||||| ||||||||||| || |||||| | ||| ||||||||||| | || ||||| Sbjct: 105656 ataatggatatgatgtttggtggtcgctacgtgattttgatgatgtcactcttttcaatt 105597 Query: 659 tacacaggattaatatacaatgaatttttctc 690 ||||| || || |||||||| ||||||||||| Sbjct: 105596 tacactgggttgatatacaacgaatttttctc 105565
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 143 bits (72), Expect = 9e-31 Identities = 126/144 (87%) Strand = Plus / Plus Query: 290 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 349 ||||||||||||||||||||| |||| ||||| ||||||||||| || ||||| || ||| Sbjct: 5436346 gatgcacttcagcgtgctactgttgatagcaaatcccaagttggttcaattttccaagtt 5436405 Query: 350 cttaacacaaaagagtctcctccaacatatttccagacaaacaaatttacctcagcattc 409 || |||||| |||| ||||||||||||| |||||||||||| |||||||| || |||||| Sbjct: 5436406 ctcaacacacaagaatctcctccaacatttttccagacaaataaatttacttctgcattc 5436465 Query: 410 caggaaattgtcgacgcatatggg 433 ||||| ||||| || || |||||| Sbjct: 5436466 caggagattgtggatgcctatggg 5436489 Score = 115 bits (58), Expect = 2e-22 Identities = 127/150 (84%) Strand = Plus / Plus Query: 437 gccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttcttattc 496 ||||||||||||||||||||||||||||| | || ||| | || |||||||||||||| Sbjct: 5437598 gccaagtatcaagaagcgaatcctggtgtctttaccattgtaacatttcctttcttattt 5437657 Query: 497 gctgtcatgtttggagattggggtcatggaatctgcatattacttgcaacactctatctg 556 ||| ||||||| ||||| ||||| |||||||| || || ||||||||||||| || || Sbjct: 5437658 gctatcatgttcggagactggggccatggaatttgtttactacttgcaacactgtacctc 5437717 Query: 557 ataatccgagagaagaaattcgcttcacag 586 |||||| |||||||||| | ||||||||| Sbjct: 5437718 ataatcagagagaagaagctagcttcacag 5437747 Score = 87.7 bits (44), Expect = 5e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 66 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 125 ||||| ||||||| ||||||||||| |||||||| ||||| || || |||||||| |||| Sbjct: 5435877 aggtatctggaaaaatatcagagttgaaggcaactattgaaataggtttagctcaccgtg 5435936 Query: 126 acagtatactcaaaactattgcatcagagtttgagcattggaac 169 |||| ||||| |||| |||| | || ||||||||||| |||||| Sbjct: 5435937 acagcatacttaaaaatatttcttccgagtttgagcaatggaac 5435980 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 178 aaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaa 237 |||||| |||||| | ||||||||||| | ||||||||||| |||||||||| ||||| Sbjct: 5436133 aaagaaagaaaaagctatttaccacacattaaacatgttgagtcttgatgtgacaaagaa 5436192 Query: 238 atgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 285 |||||| |||| |||||| |||||||| || || ||||| | |||||| Sbjct: 5436193 atgcttggttgctgagggatggagtccggtgtttgcaacaagtcaggt 5436240 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 599 ataatggagatgatgtttggaggccgctacataattatgatgatgtcaattttctcaatc 658 |||||||| ||||||||||| || |||||| | ||| ||||||||||| | || ||||| Sbjct: 5437992 ataatggatatgatgtttggtggtcgctacgtgattttgatgatgtcactcttttcaatt 5438051 Query: 659 tacacaggattaatatacaatgaatttttctc 690 ||||| || || |||||||| ||||||||||| Sbjct: 5438052 tacactgggttgatatacaacgaatttttctc 5438083
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 143 bits (72), Expect = 9e-31 Identities = 126/144 (87%) Strand = Plus / Plus Query: 290 gatgcacttcagcgtgctactcttgagagcaagtcccaagttggctcgatttttcaggtt 349 ||||||||||||||||||||| |||| ||||| ||||||||||| || ||||| || ||| Sbjct: 5437133 gatgcacttcagcgtgctactgttgatagcaaatcccaagttggttcaattttccaagtt 5437192 Query: 350 cttaacacaaaagagtctcctccaacatatttccagacaaacaaatttacctcagcattc 409 || |||||| |||| ||||||||||||| |||||||||||| |||||||| || |||||| Sbjct: 5437193 ctcaacacacaagaatctcctccaacatttttccagacaaataaatttacttctgcattc 5437252 Query: 410 caggaaattgtcgacgcatatggg 433 ||||| ||||| || || |||||| Sbjct: 5437253 caggagattgtggatgcctatggg 5437276 Score = 115 bits (58), Expect = 2e-22 Identities = 127/150 (84%) Strand = Plus / Plus Query: 437 gccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttcttattc 496 ||||||||||||||||||||||||||||| | || ||| | || |||||||||||||| Sbjct: 5438385 gccaagtatcaagaagcgaatcctggtgtctttaccattgtaacatttcctttcttattt 5438444 Query: 497 gctgtcatgtttggagattggggtcatggaatctgcatattacttgcaacactctatctg 556 ||| ||||||| ||||| ||||| |||||||| || || ||||||||||||| || || Sbjct: 5438445 gctatcatgttcggagactggggccatggaatttgtttactacttgcaacactgtacctc 5438504 Query: 557 ataatccgagagaagaaattcgcttcacag 586 |||||| |||||||||| | ||||||||| Sbjct: 5438505 ataatcagagagaagaagctagcttcacag 5438534 Score = 87.7 bits (44), Expect = 5e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 66 aggtagctggaaagatatcagagttaaaggcaacgattgacatgggattagctcatcgtg 125 ||||| ||||||| ||||||||||| |||||||| ||||| || || |||||||| |||| Sbjct: 5436664 aggtatctggaaaaatatcagagttgaaggcaactattgaaataggtttagctcaccgtg 5436723 Query: 126 acagtatactcaaaactattgcatcagagtttgagcattggaac 169 |||| ||||| |||| |||| | || ||||||||||| |||||| Sbjct: 5436724 acagcatacttaaaaatatttcttccgagtttgagcaatggaac 5436767 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 178 aaagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaa 237 |||||| |||||| | ||||||||||| | ||||||||||| |||||||||| ||||| Sbjct: 5436920 aaagaaagaaaaagctatttaccacacattaaacatgttgagtcttgatgtgacaaagaa 5436979 Query: 238 atgcttagttggtgagggctggagtccagttttcgcaactaatcaggt 285 |||||| |||| |||||| |||||||| || || ||||| | |||||| Sbjct: 5436980 atgcttggttgctgagggatggagtccggtgtttgcaacaagtcaggt 5437027 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 599 ataatggagatgatgtttggaggccgctacataattatgatgatgtcaattttctcaatc 658 |||||||| ||||||||||| || |||||| | ||| ||||||||||| | || ||||| Sbjct: 5438779 ataatggatatgatgtttggtggtcgctacgtgattttgatgatgtcactcttttcaatt 5438838 Query: 659 tacacaggattaatatacaatgaatttttctc 690 ||||| || || |||||||| ||||||||||| Sbjct: 5438839 tacactgggttgatatacaacgaatttttctc 5438870
>ref|NM_120068.3| Arabidopsis thaliana ATPase AT4G39080 mRNA, complete cds Length = 4147 Score = 113 bits (57), Expect = 8e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 326 caagttggctcgatttttcaggttcttaacacaaaagagtctcctccaacatatttccag 385 |||||||| || ||||| ||||| || | || |||||||| || ||||| ||||| | Sbjct: 1192 caagttggatcaattttccaggtcctaagaaccaaagagtcgccaccaacttattttcgc 1251 Query: 386 acaaacaaatttacctcagcattccaggaaattgtcgacgcatatggggtagccaagtat 445 |||||||||||||| || ||| ||||||||||||| || || ||||| || ||||||||| Sbjct: 1252 acaaacaaatttacttctgcaatccaggaaattgttgatgcgtatggtgtggccaagtat 1311 Query: 446 caagaagcgaatcctggtgtatacactattatcacttttcctttcttattcgctgtcatg 505 || ||||| ||||| ||||||| ||| ||| | || || || ||| | |||||||| ||| Sbjct: 1312 caggaagccaatccaggtgtattcaccattgttaccttccccttccttttcgctgttatg 1371 Query: 506 tttggagattggggtcatggaatctgcat 534 ||||| |||||||| |||||||| ||||| Sbjct: 1372 tttggtgattgggggcatggaatatgcat 1400 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Plus Query: 636 tgatgatgtcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 ||||||||||| | |||||||| ||||| |||||||| ||||| || || |||||| Sbjct: 1502 tgatgatgtcactcttctcaatatacactggattaatctacaacgagttcttctct 1557
>gb|AY060557.1| Arabidopsis thaliana AT4g39080/F19H22_180 mRNA, complete cds Length = 2819 Score = 113 bits (57), Expect = 8e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 326 caagttggctcgatttttcaggttcttaacacaaaagagtctcctccaacatatttccag 385 |||||||| || ||||| ||||| || | || |||||||| || ||||| ||||| | Sbjct: 1183 caagttggatcaattttccaggtcctaagaaccaaagagtcgccaccaacttattttcgc 1242 Query: 386 acaaacaaatttacctcagcattccaggaaattgtcgacgcatatggggtagccaagtat 445 |||||||||||||| || ||| ||||||||||||| || || ||||| || ||||||||| Sbjct: 1243 acaaacaaatttacttctgcaatccaggaaattgttgatgcgtatggtgtggccaagtat 1302 Query: 446 caagaagcgaatcctggtgtatacactattatcacttttcctttcttattcgctgtcatg 505 || ||||| ||||| ||||||| ||| ||| | || || || ||| | |||||||| ||| Sbjct: 1303 caggaagccaatccaggtgtattcaccattgttaccttccccttccttttcgctgttatg 1362 Query: 506 tttggagattggggtcatggaatctgcat 534 ||||| |||||||| |||||||| ||||| Sbjct: 1363 tttggtgattgggggcatggaatatgcat 1391 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Plus Query: 636 tgatgatgtcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 ||||||||||| | |||||||| ||||| |||||||| ||||| || || |||||| Sbjct: 1493 tgatgatgtcactcttctcaatatacactggattaatctacaacgagttcttctct 1548
>gb|BT002615.1| Arabidopsis thaliana At4g39080/F19H22_180 mRNA, complete cds Length = 2466 Score = 113 bits (57), Expect = 8e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 326 caagttggctcgatttttcaggttcttaacacaaaagagtctcctccaacatatttccag 385 |||||||| || ||||| ||||| || | || |||||||| || ||||| ||||| | Sbjct: 1108 caagttggatcaattttccaggtcctaagaaccaaagagtcgccaccaacttattttcgc 1167 Query: 386 acaaacaaatttacctcagcattccaggaaattgtcgacgcatatggggtagccaagtat 445 |||||||||||||| || ||| ||||||||||||| || || ||||| || ||||||||| Sbjct: 1168 acaaacaaatttacttctgcaatccaggaaattgttgatgcgtatggtgtggccaagtat 1227 Query: 446 caagaagcgaatcctggtgtatacactattatcacttttcctttcttattcgctgtcatg 505 || ||||| ||||| ||||||| ||| ||| | || || || ||| | |||||||| ||| Sbjct: 1228 caggaagccaatccaggtgtattcaccattgttaccttccccttccttttcgctgttatg 1287 Query: 506 tttggagattggggtcatggaatctgcat 534 ||||| |||||||| |||||||| ||||| Sbjct: 1288 tttggtgattgggggcatggaatatgcat 1316 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Plus Query: 636 tgatgatgtcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 ||||||||||| | |||||||| ||||| |||||||| ||||| || || |||||| Sbjct: 1418 tgatgatgtcactcttctcaatatacactggattaatctacaacgagttcttctct 1473
>gb|BT013720.1| Lycopersicon esculentum clone 132568R, mRNA sequence Length = 3001 Score = 91.7 bits (46), Expect = 3e-15 Identities = 130/158 (82%) Strand = Plus / Plus Query: 374 acatatttccagacaaacaaatttacctcagcattccaggaaattgtcgacgcatatggg 433 |||||||| || ||||| |||||||| || | || ||||| |||||||| ||||| ||| Sbjct: 1205 acatattttcaaacaaataaatttacttcttcttttcaggatattgtcgatgcatacggg 1264 Query: 434 gtagccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttctta 493 || || || ||||| ||||| ||||||||||| |||||||| |||| ||||| ||| | Sbjct: 1265 gtggctaaatatcaggaagcaaatcctggtgtttacactatcgtcacatttccattcctt 1324 Query: 494 ttcgctgtcatgtttggagattggggtcatggaatctg 531 ||||| || |||||||| || ||||||||||| ||||| Sbjct: 1325 ttcgcagttatgtttggtgactggggtcatggtatctg 1362 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 188 aaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaaatgcttagtt 247 ||||||||||| |||||||| |||||| | ||| |||||||||| || ||||| | || Sbjct: 1019 aaatcaatttatcacactctcaacatgcttagcattgatgtgaccaaaaaatgtctggtg 1078 Query: 248 ggtgagggctggagtccagttttcgcaactaatcaggttcaggatg 293 | ||| || |||||||| ||||| ||||| || ||| | ||||||| Sbjct: 1079 gctgaaggttggagtcctgtttttgcaaccaaacagatccaggatg 1124 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggagg 621 ||||||||||||||||| ||||| |||| |||||||| Sbjct: 1415 cagaaacttggagacatcatggaaatgacttttggagg 1452
>ref|NM_127713.3| Arabidopsis thaliana ATPase AT2G21410 mRNA, complete cds Length = 2860 Score = 77.8 bits (39), Expect = 4e-11 Identities = 120/147 (81%) Strand = Plus / Plus Query: 386 acaaacaaatttacctcagcattccaggaaattgtcgacgcatatggggtagccaagtat 445 |||||||||||||| | || |||||||||||||| || ||||| || || ||||| ||| Sbjct: 1254 acaaacaaatttactactgctttccaggaaattgttgatgcatacggtgtggccaaatat 1313 Query: 446 caagaagcgaatcctggtgtatacactattatcacttttcctttcttattcgctgtcatg 505 || || || |||||| |||||| ||| ||| | || || || ||| | || ||||| ||| Sbjct: 1314 caggaggccaatcctagtgtattcacaattgttaccttccccttcctgtttgctgttatg 1373 Query: 506 tttggagattggggtcatggaatctgc 532 ||||| || |||||||||||||||||| Sbjct: 1374 tttggtgactggggtcatggaatctgc 1400 Score = 40.1 bits (20), Expect = 9.5 Identities = 86/108 (79%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgatg 643 ||||||||||| || || ||||| ||| ||||| ||||| ||| | ||| | |||||| Sbjct: 1452 cagaaacttggggatattatggaaatggcttttggtggccgttacgttatttttatgatg 1511 Query: 644 tcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 ||| | |||||||| ||||| || ||||| ||||| || || |||||| Sbjct: 1512 tcactattctcaatatacactggtttaatctacaacgagttcttctct 1559
>gb|AY099690.1| Arabidopsis thaliana putative vacuolar proton-ATPase subunit (At2g21410) mRNA, complete cds Length = 2667 Score = 77.8 bits (39), Expect = 4e-11 Identities = 120/147 (81%) Strand = Plus / Plus Query: 386 acaaacaaatttacctcagcattccaggaaattgtcgacgcatatggggtagccaagtat 445 |||||||||||||| | || |||||||||||||| || ||||| || || ||||| ||| Sbjct: 1250 acaaacaaatttactactgctttccaggaaattgttgatgcatacggtgtggccaaatat 1309 Query: 446 caagaagcgaatcctggtgtatacactattatcacttttcctttcttattcgctgtcatg 505 || || || |||||| |||||| ||| ||| | || || || ||| | || ||||| ||| Sbjct: 1310 caggaggccaatcctagtgtattcacaattgttaccttccccttcctgtttgctgttatg 1369 Query: 506 tttggagattggggtcatggaatctgc 532 ||||| || |||||||||||||||||| Sbjct: 1370 tttggtgactggggtcatggaatctgc 1396 Score = 40.1 bits (20), Expect = 9.5 Identities = 86/108 (79%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgatg 643 ||||||||||| || || ||||| ||| ||||| ||||| ||| | ||| | |||||| Sbjct: 1448 cagaaacttggggatattatggaaatggcttttggtggccgttacgttatttttatgatg 1507 Query: 644 tcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 ||| | |||||||| ||||| || ||||| ||||| || || |||||| Sbjct: 1508 tcactattctcaatatacactggtttaatctacaacgagttcttctct 1555
>gb|AF424556.1|AF424556 Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2631 Score = 77.8 bits (39), Expect = 4e-11 Identities = 120/147 (81%) Strand = Plus / Plus Query: 386 acaaacaaatttacctcagcattccaggaaattgtcgacgcatatggggtagccaagtat 445 |||||||||||||| | || |||||||||||||| || ||||| || || ||||| ||| Sbjct: 1207 acaaacaaatttactactgctttccaggaaattgttgatgcatacggtgtggccaaatat 1266 Query: 446 caagaagcgaatcctggtgtatacactattatcacttttcctttcttattcgctgtcatg 505 || || || |||||| |||||| ||| ||| | || || || ||| | || ||||| ||| Sbjct: 1267 caggaggccaatcctagtgtattcacaattgttaccttccccttcctgtttgctgttatg 1326 Query: 506 tttggagattggggtcatggaatctgc 532 ||||| || |||||||||||||||||| Sbjct: 1327 tttggtgactggggtcatggaatctgc 1353 Score = 40.1 bits (20), Expect = 9.5 Identities = 86/108 (79%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgatg 643 ||||||||||| || || ||||| ||| ||||| ||||| ||| | ||| | |||||| Sbjct: 1405 cagaaacttggggatattatggaaatggcttttggtggccgttacgttatttttatgatg 1464 Query: 644 tcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 ||| | |||||||| ||||| || ||||| ||||| || || |||||| Sbjct: 1465 tcactattctcaatatacactggtttaatctacaacgagttcttctct 1512
>gb|AY124855.1| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2466 Score = 69.9 bits (35), Expect = 1e-08 Identities = 119/147 (80%) Strand = Plus / Plus Query: 386 acaaacaaatttacctcagcattccaggaaattgtcgacgcatatggggtagccaagtat 445 |||||||||||||| | || |||||||||||||| || ||||| || || ||||| ||| Sbjct: 1171 acaaacaaatttactactgctttccaggaaattgttgatgcatacggtgtggccaaatat 1230 Query: 446 caagaagcgaatcctggtgtatacactattatcacttttcctttcttattcgctgtcatg 505 || || || |||||| |||||| ||| ||| | || || | ||| | || ||||| ||| Sbjct: 1231 caggaggccaatcctagtgtattcacaattgttaccttcctcttcctgtttgctgttatg 1290 Query: 506 tttggagattggggtcatggaatctgc 532 ||||| || |||||||||||||||||| Sbjct: 1291 tttggtgactggggtcatggaatctgc 1317 Score = 40.1 bits (20), Expect = 9.5 Identities = 86/108 (79%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgatg 643 ||||||||||| || || ||||| ||| ||||| ||||| ||| | ||| | |||||| Sbjct: 1369 cagaaacttggggatattatggaaatggcttttggtggccgttacgttatttttatgatg 1428 Query: 644 tcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 ||| | |||||||| ||||| || ||||| ||||| || || |||||| Sbjct: 1429 tcactattctcaatatacactggtttaatctacaacgagttcttctct 1476
>gb|AY053417.1| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2852 Score = 69.9 bits (35), Expect = 1e-08 Identities = 119/147 (80%) Strand = Plus / Plus Query: 386 acaaacaaatttacctcagcattccaggaaattgtcgacgcatatggggtagccaagtat 445 |||||||||||||| | || |||||||||||||| || ||||| || || ||||| ||| Sbjct: 1246 acaaacaaatttactactgctttccaggaaattgttgatgcatacggtgtggccaaatat 1305 Query: 446 caagaagcgaatcctggtgtatacactattatcacttttcctttcttattcgctgtcatg 505 || || || |||||| |||||| ||| ||| | || || | ||| | || ||||| ||| Sbjct: 1306 caggaggccaatcctagtgtattcacaattgttaccttcctcttcctgtttgctgttatg 1365 Query: 506 tttggagattggggtcatggaatctgc 532 ||||| || |||||||||||||||||| Sbjct: 1366 tttggtgactggggtcatggaatctgc 1392 Score = 40.1 bits (20), Expect = 9.5 Identities = 86/108 (79%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgatg 643 ||||||||||| || || ||||| ||| ||||| ||||| ||| | ||| | |||||| Sbjct: 1444 cagaaacttggggatattatggaaatggcttttggtggccgttacgttatttttatgatg 1503 Query: 644 tcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 ||| | |||||||| ||||| || ||||| ||||| || || |||||| Sbjct: 1504 tcactattctcaatatacactggtttaatctacaacgagttcttctct 1551
>emb|AJ438978.1|MCR438978 Mesembryanthemum crystallinum mRNA for putative vacuolar ATPase subunit 100 kDa subunit (vpha-a gene) Length = 2783 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgatg 643 |||||||| |||||||| ||||||||||||||||| ||||| || | ||| | |||||| Sbjct: 1427 cagaaactgggagacatcatggagatgatgtttggtggccgatatgtcattttcatgatg 1486 Query: 644 tcaattttctcaatctacacaggattaatatacaatgaatttttctc 690 || | |||||||| |||||||| ||||| || ||||| || ||||| Sbjct: 1487 gcattgttctcaatttacacaggcttaatctataatgagttcttctc 1533 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 153 agtttgagcattggaaccatctggcaaagaaggaaaaatcaatttaccacactctgaaca 212 |||||||||| ||||||| ||||| |||||| ||||||||||| ||||||||||||| Sbjct: 996 agtttgagcagtggaaccttctggtgcggaaggagaaatcaatttatcacactctgaaca 1055 Query: 213 tg 214 || Sbjct: 1056 tg 1057 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 371 ccaacatatttccagacaaacaaatttacctcagcattccaggaaattgtcgacgcatat 430 ||||| ||||| | ||||||||||||||| || | || || || ||||| || |||||| Sbjct: 1214 ccaacctattttcggacaaacaaatttacttcttcctttcaagagattgttgatgcatat 1273 Query: 431 ggggtagccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttc 490 ||| | || | |||||||||||| ||||| |||||||| ||| | || ||||| ||| Sbjct: 1274 gggattgctaggtatcaagaagccaatccatcagtatacacaattgttacatttccattc 1333 Query: 491 ttattcgctgtcatgtttggagattggggtcatggaatctgcatattacttgc 543 | || || ||||||||||| |||||||| || || || ||||| |||||||| Sbjct: 1334 ctgtttgcagtcatgtttggtgattgggggcacggcatatgcattttacttgc 1386
>gb|AC149302.1| Solanum demissum chromosome 11 clone PGEC400L14 map MAP_LOC, complete sequence Length = 136874 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 455 aatcctggtgtatacactattatcacttttcctttcttattcgctgtcatgtttggagat 514 ||||||| ||| ||||| ||| | || || |||||| | |||||||| |||||||||||| Sbjct: 91829 aatcctgctgtctacaccattgttacattccctttccttttcgctgtgatgtttggagat 91888 Query: 515 tggggtcatggaat 528 |||||||||||||| Sbjct: 91889 tggggtcatggaat 91902
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 437 gccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttcttattc 496 ||||||||||| ||||| ||||| ||||||| ||| ||| | || || || ||| | ||| Sbjct: 126810 gccaagtatcaggaagccaatccaggtgtattcaccattgttaccttccccttccttttc 126869 Query: 497 gctgtcatgtttggagattggggtcatggaatctgcat 534 ||||| |||||||| |||||||| |||||||| ||||| Sbjct: 126870 gctgttatgtttggtgattgggggcatggaatatgcat 126907 Score = 56.0 bits (28), Expect = 2e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 326 caagttggctcgatttttcaggttcttaacacaaaagagtctcctccaacatatttccag 385 |||||||| || ||||| ||||| || | || |||||||| || ||||| ||||| | Sbjct: 126567 caagttggatcaattttccaggtcctaagaaccaaagagtcgccaccaacttattttcgc 126626 Query: 386 acaaacaaatttacctcagcattccaggaaattgtcgacgcatatggg 433 |||||||||||||| || ||| ||||||||||||| || || |||||| Sbjct: 126627 acaaacaaatttacttctgcaatccaggaaattgttgatgcgtatggg 126674 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Plus Query: 636 tgatgatgtcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 ||||||||||| | |||||||| ||||| |||||||| ||||| || || |||||| Sbjct: 127248 tgatgatgtcactcttctcaatatacactggattaatctacaacgagttcttctct 127303
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 437 gccaagtatcaagaagcgaatcctggtgtatacactattatcacttttcctttcttattc 496 ||||||||||| ||||| ||||| ||||||| ||| ||| | || || || ||| | ||| Sbjct: 88800 gccaagtatcaggaagccaatccaggtgtattcaccattgttaccttccccttccttttc 88859 Query: 497 gctgtcatgtttggagattggggtcatggaatctgcat 534 ||||| |||||||| |||||||| |||||||| ||||| Sbjct: 88860 gctgttatgtttggtgattgggggcatggaatatgcat 88897 Score = 56.0 bits (28), Expect = 2e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 326 caagttggctcgatttttcaggttcttaacacaaaagagtctcctccaacatatttccag 385 |||||||| || ||||| ||||| || | || |||||||| || ||||| ||||| | Sbjct: 88557 caagttggatcaattttccaggtcctaagaaccaaagagtcgccaccaacttattttcgc 88616 Query: 386 acaaacaaatttacctcagcattccaggaaattgtcgacgcatatggg 433 |||||||||||||| || ||| ||||||||||||| || || |||||| Sbjct: 88617 acaaacaaatttacttctgcaatccaggaaattgttgatgcgtatggg 88664 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Plus Query: 636 tgatgatgtcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 ||||||||||| | |||||||| ||||| |||||||| ||||| || || |||||| Sbjct: 89238 tgatgatgtcactcttctcaatatacactggattaatctacaacgagttcttctct 89293
>dbj|AP006110.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39G11, TM0195b, complete sequence Length = 52245 Score = 61.9 bits (31), Expect = 3e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgatg 643 |||||||||||||||||| | || ||| ||||| || ||||| || |||||| ||||| Sbjct: 19932 cagaaacttggagacatattagaaatggcttttgggggacgctatattattatgttgatg 19991 Query: 644 tcaattttctcaatctacacaggattaatatacaatgaatttttctc 690 || | |||||||||||||| || || ||||| |||||||| ||||| Sbjct: 19992 gcactattctcaatctacaccggcttgatatataatgaattcttctc 20038 Score = 44.1 bits (22), Expect = 0.61 Identities = 52/62 (83%) Strand = Plus / Plus Query: 179 aagaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaaa 238 |||||||||||||| |||||| ||||||| || ||| | ||| || |||| |||| |||| Sbjct: 19210 aagaaggaaaaatccatttactacactctaaatatgctaagcattaatgtcacgaggaaa 19269 Query: 239 tg 240 || Sbjct: 19270 tg 19271
>ref|NM_080467.2| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A4 (Atp6v0a4), mRNA Length = 3318 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 |||||||| ||||| || || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1450 tacactatcatcaccttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1509 Query: 527 at 528 || Sbjct: 1510 at 1511
>gb|AF435090.1| Mus musculus vacuolar proton translocating ATPase a4 isoform mRNA, complete cds Length = 3318 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 |||||||| ||||| || || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1450 tacactatcatcaccttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1509 Query: 527 at 528 || Sbjct: 1510 at 1511
>dbj|AK128892.1| Mus musculus cDNA fis, clone TRACH2004887, moderately similar to Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a isoform 4 (ATP6V0A4) Length = 2197 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 |||||||| ||||| || || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1462 tacactatcatcaccttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1521 Query: 527 at 528 || Sbjct: 1522 at 1523
>gb|AC157667.11| Mus musculus 6 BAC RP24-86B22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 206878 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 |||||||| ||||| || || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 146594 tacactatcatcaccttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 146653 Query: 527 at 528 || Sbjct: 146654 at 146655
>gb|AF326316.1|AF326316 Mus musculus H-ATPase accessory subunit a4 mRNA, complete cds Length = 2661 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 |||||||| ||||| || || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1256 tacactatcatcaccttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1315 Query: 527 at 528 || Sbjct: 1316 at 1317
>gb|BC046979.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A4, mRNA (cDNA clone MGC:54824 IMAGE:6315485), complete cds Length = 3323 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 |||||||| ||||| || || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1484 tacactatcatcaccttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1543 Query: 527 at 528 || Sbjct: 1544 at 1545
>dbj|AB050903.1| Mus musculus mRNA for a4 subunit isoform, complete cds Length = 3014 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 |||||||| ||||| || || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1188 tacactatcatcaccttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1247 Query: 527 at 528 || Sbjct: 1248 at 1249
>ref|NM_190469.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2379 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 497 gctgtcatgtttggagattggggtcatgg 525 ||||| ||||||||||||||||||||||| Sbjct: 1273 gctgtgatgtttggagattggggtcatgg 1301
>ref|NM_130840.2| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4 (ATP6V0A4), transcript variant 2, mRNA Length = 3049 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1366 tacaccatcatcactttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1425 Query: 527 a 527 | Sbjct: 1426 a 1426
>ref|NM_020632.2| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4 (ATP6V0A4), transcript variant 1, mRNA Length = 3152 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1469 tacaccatcatcactttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1528 Query: 527 a 527 | Sbjct: 1529 a 1529
>ref|NM_130841.2| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4 (ATP6V0A4), transcript variant 3, mRNA Length = 3107 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1424 tacaccatcatcactttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1483 Query: 527 a 527 | Sbjct: 1484 a 1484
>gb|BC109305.1| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4, transcript variant 2, mRNA (cDNA clone MGC:130017 IMAGE:40035237), complete cds Length = 2709 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1274 tacaccatcatcactttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1333 Query: 527 a 527 | Sbjct: 1334 a 1334
>gb|BC109304.1| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4, transcript variant 2, mRNA (cDNA clone MGC:130016 IMAGE:40035236), complete cds Length = 2709 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1274 tacaccatcatcactttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1333 Query: 527 a 527 | Sbjct: 1334 a 1334
>dbj|AK055789.1| Homo sapiens cDNA FLJ31227 fis, clone KIDNE2004411, highly similar to Homo sapiens vacuolar proton pump 116 kDa accessory subunit (ATP6N1B) mRNA Length = 2037 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 857 tacaccatcatcactttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 916 Query: 527 a 527 | Sbjct: 917 a 917
>gb|AC020983.8| Homo sapiens chromosome 7 clone RP11-269N18, complete sequence Length = 174378 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 163349 tacaccatcatcactttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 163290 Query: 527 a 527 | Sbjct: 163289 a 163289
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 497 gctgtcatgtttggagattggggtcatgg 525 ||||| ||||||||||||||||||||||| Sbjct: 35731319 gctgtgatgtttggagattggggtcatgg 35731347
>gb|AF245517.1|AF245517 Homo sapiens vacuolar proton pump 116 kDa accessory subunit (ATP6N1B) mRNA, complete cds, alternatively spliced Length = 3137 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 1454 tacaccatcatcactttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 1513 Query: 527 a 527 | Sbjct: 1514 a 1514
>gb|AC018663.3|AC018663 Human Chromosome 7 clone RP11-288A3, complete sequence Length = 170423 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | |||||||| ||||||||||| || ||||||||| Sbjct: 56861 tacaccatcatcactttccccttcctgttcgctgtgatgtttggagactgtggtcatgga 56802 Query: 527 a 527 | Sbjct: 56801 a 56801
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 497 gctgtcatgtttggagattggggtcatgg 525 ||||| ||||||||||||||||||||||| Sbjct: 134656 gctgtgatgtttggagattggggtcatgg 134684
>dbj|AK100543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102L09, full insert sequence Length = 3186 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 497 gctgtcatgtttggagattggggtcatgg 525 ||||| ||||||||||||||||||||||| Sbjct: 1468 gctgtgatgtttggagattggggtcatgg 1496
>dbj|AK099857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110K23, full insert sequence Length = 3077 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 497 gctgtcatgtttggagattggggtcatgg 525 ||||| ||||||||||||||||||||||| Sbjct: 1418 gctgtgatgtttggagattggggtcatgg 1446
>dbj|AK069188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006E13, full insert sequence Length = 3039 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 497 gctgtcatgtttggagattggggtcatgg 525 ||||| ||||||||||||||||||||||| Sbjct: 1380 gctgtgatgtttggagattggggtcatgg 1408
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 48.1 bits (24), Expect = 0.039 Identities = 33/36 (91%) Strand = Plus / Plus Query: 497 gctgtcatgtttggagattggggtcatggaatctgc 532 ||||| |||||||| || |||||||||||||||||| Sbjct: 63157 gctgttatgtttggtgactggggtcatggaatctgc 63192 Score = 42.1 bits (21), Expect = 2.4 Identities = 87/109 (79%) Strand = Plus / Plus Query: 583 acagaaacttggagacataatggagatgatgtttggaggccgctacataattatgatgat 642 |||||||||||| || || ||||| ||| ||||| ||||| ||| | ||| | ||||| Sbjct: 63439 acagaaacttggggatattatggaaatggcttttggtggccgttacgttatttttatgat 63498 Query: 643 gtcaattttctcaatctacacaggattaatatacaatgaatttttctct 691 |||| | |||||||| ||||| || ||||| ||||| || || |||||| Sbjct: 63499 gtcactattctcaatatacactggtttaatctacaacgagttcttctct 63547 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 386 acaaacaaatttacctcagcattccaggaaattgtcgacgcata 429 |||||||||||||| | || |||||||||||||| || ||||| Sbjct: 62689 acaaacaaatttactactgctttccaggaaattgttgatgcata 62732
>gb|AC160126.2| Mus musculus BAC clone RP23-295C1 from chromosome 13, complete sequence Length = 212570 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 498 ctgtcatgtttggagattggggt 520 ||||||||||||||||||||||| Sbjct: 114250 ctgtcatgtttggagattggggt 114272
>ref|XM_746606.1| Aspergillus fumigatus Af293 vacuolar ATPase 98 kDa subunit (Afu4g11300) partial mRNA Length = 2574 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 485 cctttcttattcgctgtcatgtttggagatt 515 ||||||||||| |||||||||||||| |||| Sbjct: 1273 cctttcttatttgctgtcatgtttggtgatt 1303
>ref|XM_380994.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00818.1) partial mRNA Length = 2574 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 485 cctttcttattcgctgtcatgtttggagatt 515 |||||||| ||||||||||||||||| |||| Sbjct: 1261 cctttcttgttcgctgtcatgtttggtgatt 1291
>dbj|AK043716.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830023F21 product:unclassifiable, full insert sequence Length = 3458 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 498 ctgtcatgtttggagattggggt 520 ||||||||||||||||||||||| Sbjct: 871 ctgtcatgtttggagattggggt 849
>emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chromosome 13, complete sequence Length = 231247 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 498 ctgtcatgtttggagattggggt 520 ||||||||||||||||||||||| Sbjct: 168824 ctgtcatgtttggagattggggt 168846
>ref|NM_104968.2| Arabidopsis thaliana O-methyltransferase/ S-adenosylmethionine-dependent methyltransferase/ methyltransferase AT1G62900 mRNA, complete cds Length = 836 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 actattatcacttttcctttct 491 |||||||||||||||||||||| Sbjct: 482 actattatcacttttcctttct 461
>ref|NM_202347.1| Arabidopsis thaliana O-methyltransferase/ S-adenosylmethionine-dependent methyltransferase AT1G63140 transcript variant AT1G63140.2 mRNA, complete cds Length = 1296 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 actattatcacttttcctttct 491 |||||||||||||||||||||| Sbjct: 961 actattatcacttttcctttct 940
>ref|NM_104992.2| Arabidopsis thaliana O-methyltransferase/ S-adenosylmethionine-dependent methyltransferase AT1G63140 transcript variant AT1G63140.1 mRNA, complete cds Length = 1338 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 actattatcacttttcctttct 491 |||||||||||||||||||||| Sbjct: 1003 actattatcacttttcctttct 982
>gb|AC152400.9| Mus musculus chromosome 3, clone RP23-277L18, complete sequence Length = 190913 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 caaacacatactgttcaggagg 68 |||||||||||||||||||||| Sbjct: 86156 caaacacatactgttcaggagg 86177
>emb|AL391724.7| Human DNA sequence from clone RP11-350A18 on chromosome 13 Contains a novel gene, complete sequence Length = 141628 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 42 ctaaacaaacacatactgttca 63 |||||||||||||||||||||| Sbjct: 44972 ctaaacaaacacatactgttca 44993
>gb|AC055822.10| Homo sapiens chromosome 8, clone RP11-707M3, complete sequence Length = 202033 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 373 aacatatttccagacaaacaaa 394 |||||||||||||||||||||| Sbjct: 46424 aacatatttccagacaaacaaa 46445
>dbj|AK221717.1| Arabidopsis thaliana mRNA for caffeic O-methyltransferase, complete cds, clone: RAFL16-94-A21 Length = 1343 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 actattatcacttttcctttct 491 |||||||||||||||||||||| Sbjct: 1003 actattatcacttttcctttct 982
>dbj|AK036206.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630045K08 product:unclassifiable, full insert sequence Length = 3365 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 caaacacatactgttcaggagg 68 |||||||||||||||||||||| Sbjct: 352 caaacacatactgttcaggagg 331
>emb|AJ617076.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np264 Length = 150 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggagg 621 ||||||||||||||||| ||||| |||| |||||||| Sbjct: 23 cagaaacttggagacatcatggaaatgacctttggagg 60
>emb|BX813687.1|CNS0AC66 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZE12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1217 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 actattatcacttttcctttct 491 |||||||||||||||||||||| Sbjct: 931 actattatcacttttcctttct 910
>gb|AC010795.5|AC010795 Arabidopsis thaliana chromosome 1 BAC F16M19 genomic sequence, complete sequence Length = 100512 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 actattatcacttttcctttct 491 |||||||||||||||||||||| Sbjct: 69894 actattatcacttttcctttct 69873
>gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 98412 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 actattatcacttttcctttct 491 |||||||||||||||||||||| Sbjct: 24695 actattatcacttttcctttct 24674
>emb|AJ289020.1|GGA289020 Gallus gallus mRNA for vacuolar H(+)-transporting ATPase 116 kDa subunit, a2 isoform (a2 gene) Length = 2673 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 476 atcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 1320 atcacttttcccttcttgtttgctgttatgtttggaga 1357
>dbj|AK117347.1| Arabidopsis thaliana At1g63140 mRNA for putative caffeic O-methyltransferase, complete cds, clone: RAFL16-91-A03 Length = 1338 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 470 actattatcacttttcctttct 491 |||||||||||||||||||||| Sbjct: 1003 actattatcacttttcctttct 982
>ref|NM_204723.1| Gallus gallus ATPase, H+ transporting, lysosomal V0 subunit A2 (ATP6V0A2), mRNA Length = 2627 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 476 atcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 1274 atcacttttcccttcttgtttgctgttatgtttggaga 1311
>gb|AF006904.1|AF006904 HIV-1 strain 225.710 from Uganda, gp41, immunodominant region (env) gene, partial cds Length = 388 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 658 ctacacaggattaatatacaat 679 |||||||||||||||||||||| Sbjct: 252 ctacacaggattaatatacaat 273
>gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, complete sequence Length = 156835 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 655 aatctacacaggattaatata 675 ||||||||||||||||||||| Sbjct: 133814 aatctacacaggattaatata 133834
>ref|NM_179791.1| Arabidopsis thaliana ATPase AT2G28520 mRNA, complete cds Length = 2947 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 497 gctgtcatgtttggagattggggtcatgg 525 ||||| |||||||| |||||||||||||| Sbjct: 1406 gctgttatgtttggtgattggggtcatgg 1434 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgcta 627 |||||||||||| | | ||||||||| | |||||||||||||| Sbjct: 1493 cagaaacttggaagctttatggagatgctttttggaggccgcta 1536
>ref|XM_597181.2| PREDICTED: Bos taurus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 1 (LOC518974), mRNA Length = 3157 Score = 42.1 bits (21), Expect = 2.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | ||||| || ||||||||||| || ||||||||| Sbjct: 1195 tacaccatcatcactttccccttcctgttcgccgtgatgtttggagactgtggtcatgga 1254 Query: 527 a 527 | Sbjct: 1255 a 1255
>ref|XM_873205.1| PREDICTED: Bos taurus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 3 (LOC518974), mRNA Length = 2105 Score = 42.1 bits (21), Expect = 2.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | ||||| || ||||||||||| || ||||||||| Sbjct: 13 tacaccatcatcactttccccttcctgttcgccgtgatgtttggagactgtggtcatgga 72 Query: 527 a 527 | Sbjct: 73 a 73
>ref|XM_864430.1| PREDICTED: Bos taurus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 2 (LOC518974), mRNA Length = 3163 Score = 42.1 bits (21), Expect = 2.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 467 tacactattatcacttttcctttcttattcgctgtcatgtttggagattggggtcatgga 526 ||||| || |||||||| || ||| | ||||| || ||||||||||| || ||||||||| Sbjct: 1201 tacaccatcatcactttccccttcctgttcgccgtgatgtttggagactgtggtcatgga 1260 Query: 527 a 527 | Sbjct: 1261 a 1261
>gb|AC125531.3| Mus musculus BAC clone RP23-396D12 from chromosome 10, complete sequence Length = 219818 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 671 atatacaatgaatttttctct 691 ||||||||||||||||||||| Sbjct: 93463 atatacaatgaatttttctct 93443
>emb|AL136128.9| Human DNA sequence from clone RP1-84N20 on chromosome 6 Contains a novel gene, the 5' end of the TPD52L1 gene encoding two variants of tumor protein D52-like 1 protein and two CpG islands, complete sequence Length = 151875 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 668 ttaatatacaatgaatttttc 688 ||||||||||||||||||||| Sbjct: 38472 ttaatatacaatgaatttttc 38452
>emb|AL035070.3|HS1043L13 Human DNA sequence from clone RP5-1043L13 on chromosome 20q13.2-13.33 Contains part of a novel gene (LOC284757), complete sequence Length = 156666 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 acatatttccagacaaacaaa 394 ||||||||||||||||||||| Sbjct: 20134 acatatttccagacaaacaaa 20114
>emb|X95096.1|RNMACSTIM R.norvegicus mRNA for macrophage stimulating protein Length = 2222 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cacatactgttcaggaggtag 71 ||||||||||||||||||||| Sbjct: 1812 cacatactgttcaggaggtag 1792
>gb|AY091008.1| Arabidopsis thaliana putative vacuolar proton-ATPase subunit (At2g28520) mRNA, complete cds Length = 2923 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 497 gctgtcatgtttggagattggggtcatgg 525 ||||| |||||||| |||||||||||||| Sbjct: 1406 gctgttatgtttggtgattggggtcatgg 1434 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgcta 627 |||||||||||| | | ||||||||| | |||||||||||||| Sbjct: 1493 cagaaacttggaagctttatggagatgctttttggaggccgcta 1536
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 aacacaaaagagtctcctcca 373 ||||||||||||||||||||| Sbjct: 1710852 aacacaaaagagtctcctcca 1710832
>gb|AC006587.5| Arabidopsis thaliana chromosome 2 clone T17D12 map mi54, complete sequence Length = 86579 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 497 gctgtcatgtttggagattggggtcatgg 525 ||||| |||||||| |||||||||||||| Sbjct: 48236 gctgttatgtttggtgattggggtcatgg 48264 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 584 cagaaacttggagacataatggagatgatgtttggaggccgcta 627 |||||||||||| | | ||||||||| | |||||||||||||| Sbjct: 48743 cagaaacttggaagctttatggagatgctttttggaggccgcta 48786
>gb|AC020610.6| Homo sapiens 12q BAC RP11-548L17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 92893 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 tatcacttttcctttcttatt 495 ||||||||||||||||||||| Sbjct: 76113 tatcacttttcctttcttatt 76093
>ref|XM_702949.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 4 (LOC561117), mRNA Length = 2343 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 657 tctacacaggattaatatacaatga 681 ||||||| ||||||||||||||||| Sbjct: 1397 tctacactggattaatatacaatga 1421
>ref|XM_702948.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 3 (LOC561117), mRNA Length = 3497 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 657 tctacacaggattaatatacaatga 681 ||||||| ||||||||||||||||| Sbjct: 1397 tctacactggattaatatacaatga 1421
>ref|XM_702947.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 2 (LOC561117), mRNA Length = 1780 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 657 tctacacaggattaatatacaatga 681 ||||||| ||||||||||||||||| Sbjct: 1397 tctacactggattaatatacaatga 1421
>ref|XM_680526.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 1 (LOC561117), mRNA Length = 3530 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 657 tctacacaggattaatatacaatga 681 ||||||| ||||||||||||||||| Sbjct: 1397 tctacactggattaatatacaatga 1421
>ref|XM_681374.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7) (LOC562096), mRNA Length = 3495 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 657 tctacacaggattaatatacaatga 681 ||||||| ||||||||||||||||| Sbjct: 1397 tctacactggattaatatacaatga 1421
>ref|XM_703146.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 3 (LOC561869), mRNA Length = 2343 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 657 tctacacaggattaatatacaatga 681 ||||||| ||||||||||||||||| Sbjct: 1397 tctacactggattaatatacaatga 1421
>ref|XM_703145.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 2 (LOC561869), mRNA Length = 1780 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 657 tctacacaggattaatatacaatga 681 ||||||| ||||||||||||||||| Sbjct: 1397 tctacactggattaatatacaatga 1421
>ref|XM_680945.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 1 (LOC561869), mRNA Length = 3495 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 657 tctacacaggattaatatacaatga 681 ||||||| ||||||||||||||||| Sbjct: 1397 tctacactggattaatatacaatga 1421
>gb|CY004832.1| Influenza A virus (A/mallard duck/ALB/630/1984(H4N2)) segment 6, complete sequence Length = 1467 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 599 ataatggagatgatgtttgga 619 ||||||||||||||||||||| Sbjct: 1083 ataatggagatgatgtttgga 1103
>gb|BC089796.1| Rattus norvegicus Macrophage stimulating 1 (hepatocyte growth factor-like), mRNA (cDNA clone MGC:108677 IMAGE:7322260), complete cds Length = 2280 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cacatactgttcaggaggtag 71 ||||||||||||||||||||| Sbjct: 1816 cacatactgttcaggaggtag 1796
>emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, complete sequence Length = 283185 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 657 tctacacaggattaatatacaatga 681 ||||||| ||||||||||||||||| Sbjct: 229148 tctacactggattaatatacaatga 229172
>emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 in linkage group 5, complete sequence Length = 184417 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 657 tctacacaggattaatatacaatga 681 ||||||| ||||||||||||||||| Sbjct: 22086 tctacactggattaatatacaatga 22062
>emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in linkage group 22, complete sequence Length = 209223 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cttgctaaacaaacacatact 58 ||||||||||||||||||||| Sbjct: 85488 cttgctaaacaaacacatact 85468
>gb|AC104874.11| Mus musculus chromosome 3, clone RP23-453I14, complete sequence Length = 182940 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 655 aatctacacaggattaatata 675 ||||||||||||||||||||| Sbjct: 2344 aatctacacaggattaatata 2364
>ref|NM_024352.1| Rattus norvegicus Macrophage stimulating 1 (hepatocyte growth factor-like) (Mst1), mRNA Length = 2222 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cacatactgttcaggaggtag 71 ||||||||||||||||||||| Sbjct: 1812 cacatactgttcaggaggtag 1792
>ref|XM_511508.1| PREDICTED: Pan troglodytes ATPase, H+ transporting, lysosomal V0 subunit a isoform 1 (LOC454685), mRNA Length = 2877 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 470 actattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| || ||||| |||| ||||| ||||||||||| Sbjct: 1477 actattatcacgttcccttttctatttgctgtgatgtttggaga 1520
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 tctcctccaacatatttcca 384 |||||||||||||||||||| Sbjct: 86233 tctcctccaacatatttcca 86252
>ref|NM_001009982.1| Danio rerio solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 like (slc17a6l), mRNA Length = 2608 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tgaacatgttgagcgttgatgtga 230 ||||||||||||| |||||||||| Sbjct: 812 tgaacatgttgagggttgatgtga 789
>gb|AF016683.2| Caenorhabditis elegans cosmid K09F6, complete sequence Length = 41537 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 agacaaacaaatttacctca 403 |||||||||||||||||||| Sbjct: 20426 agacaaacaaatttacctca 20445
>gb|CP000355.1| Ralstonia metallidurans CH34 plasmid pMOL28, complete sequence Length = 171459 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tatcaagaagcgaatcctgg 462 |||||||||||||||||||| Sbjct: 147672 tatcaagaagcgaatcctgg 147653
>gb|AC123810.4| Mus musculus BAC clone RP24-178B17 from chromosome 8, complete sequence Length = 161521 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 aaagatatcagagttaaagg 95 |||||||||||||||||||| Sbjct: 62254 aaagatatcagagttaaagg 62273
>gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosome 2, complete sequence Length = 221128 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aaacaaacacatactgttca 63 |||||||||||||||||||| Sbjct: 93757 aaacaaacacatactgttca 93738
>gb|AC111013.3| Mus musculus BAC clone RP24-223F21 from 3, complete sequence Length = 144931 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 caggttcttaacacaaaaga 363 |||||||||||||||||||| Sbjct: 98376 caggttcttaacacaaaaga 98357
>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence Length = 116616 Score = 40.1 bits (20), Expect = 9.5 Identities = 77/96 (80%) Strand = Plus / Plus Query: 181 gaaggaaaaatcaatttaccacactctgaacatgttgagcgttgatgtgacgaagaaatg 240 |||||||||||| ||| |||| || || |||||| | ||| | ||||| ||||| ||||| Sbjct: 58235 gaaggaaaaatccattcaccatacccttaacatgctaagcctggatgtaacgaaaaaatg 58294 Query: 241 cttagttggtgagggctggagtccagttttcgcaac 276 | || | |||||| |||||||| ||||| ||||| Sbjct: 58295 tcttgtggctgaggggtggagtcctgtttttgcaac 58330
>ref|NM_005177.3| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a1 (ATP6V0A1), mRNA Length = 4187 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 470 actattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| || ||||| |||| ||||| ||||||||||| Sbjct: 1350 actattatcacgttcccttttctatttgctgtgatgtttggaga 1393
>gb|BC032398.1| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a1, mRNA (cDNA clone MGC:40328 IMAGE:5195776), complete cds Length = 4137 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 470 actattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| || ||||| |||| ||||| ||||||||||| Sbjct: 1282 actattatcacgttcccttttctatttgctgtgatgtttggaga 1325
>emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chromosome 9 Contains two novel genes, the gene for a novel zinc finger protein (FLJ14960, KIAA1803), a ribosomal protein L7a (RPL7A) pseudogene and the 3' end of a novel gene, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 595 agacataatggagatgatgt 614 |||||||||||||||||||| Sbjct: 45069 agacataatggagatgatgt 45050
>gb|AC107993.9| Homo sapiens chromosome 17, clone RP11-194N12, complete sequence Length = 173608 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 470 actattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| || ||||| |||| ||||| ||||||||||| Sbjct: 166744 actattatcacgttcccttttctatttgctgtgatgtttggaga 166787
>emb|X90708.2|AEPARREPG Ralstonia metallidurans CH34 plasmid pMOL28 Length = 171461 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 tatcaagaagcgaatcctgg 462 |||||||||||||||||||| Sbjct: 168524 tatcaagaagcgaatcctgg 168543
>emb|BX648978.1|HSM809129 Homo sapiens mRNA; cDNA DKFZp686N0561 (from clone DKFZp686N0561) Length = 4123 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 470 actattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| || ||||| |||| ||||| ||||||||||| Sbjct: 1333 actattatcacgttcccttttctatttgctgtgatgtttggaga 1376
>ref|NM_001016223.2| Xenopus tropicalis ATPase, H+ transporting, lysosomal V0 subunit a isoform 2 (atp6v0a2), mRNA Length = 3171 Score = 40.1 bits (20), Expect = 9.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 466 atacactattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||| || || ||||||||| | || ||||| ||||||||||| Sbjct: 1243 atacactatcattacctttcctttcctgtttgctgtgatgtttggaga 1290
>emb|CR861438.1| Pongo pygmaeus mRNA; cDNA DKFZp459K212 (from clone DKFZp459K212) Length = 4091 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 470 actattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| || ||||| |||| ||||| ||||||||||| Sbjct: 1262 actattatcacgttcccttttctatttgctgtgatgtttggaga 1305
>emb|CR860731.1| Pongo pygmaeus mRNA; cDNA DKFZp459J0327 (from clone DKFZp459J0327) Length = 4137 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 470 actattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| || ||||| |||| ||||| ||||||||||| Sbjct: 1303 actattatcacgttcccttttctatttgctgtgatgtttggaga 1346
>emb|CR860453.1| Pongo pygmaeus mRNA; cDNA DKFZp459P201 (from clone DKFZp459P201) Length = 4094 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 470 actattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| || ||||| |||| ||||| ||||||||||| Sbjct: 1263 actattatcacgttcccttttctatttgctgtgatgtttggaga 1306
>gb|L78933.1|HUMVACHATP Homo sapiens vacuolar-type H(+)-ATPase mRNA, complete cds Length = 3033 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 470 actattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| || ||||| |||| ||||| ||||||||||| Sbjct: 1352 actattatcacgttcccttttctatttgctgtgatgtttggaga 1395
>gb|AC018616.5|AC018616 Homo sapiens chromosome 8, clone RP11-157I4, complete sequence Length = 165948 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 atatttccagacaaacaaat 395 |||||||||||||||||||| Sbjct: 69378 atatttccagacaaacaaat 69397
>gb|AY842074.1| Human immunodeficiency virus isolate VP/SW/3 from Cameroon envelope glycoprotein (env) gene, partial cds Length = 436 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 659 tacacaggattaatatacaa 678 |||||||||||||||||||| Sbjct: 283 tacacaggattaatatacaa 302
>gb|AY551797.1| HIV-1 clone VP/SW/3 from Cameroon envelope glycoprotein (env) gene, partial cds Length = 433 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 659 tacacaggattaatatacaa 678 |||||||||||||||||||| Sbjct: 280 tacacaggattaatatacaa 299
>emb|BX284619.11| Zebrafish DNA sequence from clone DKEY-251E24 in linkage group 1, complete sequence Length = 196931 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 taaacaaacacatactgttc 62 |||||||||||||||||||| Sbjct: 25916 taaacaaacacatactgttc 25897
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aactattgcatcagagtttg 158 |||||||||||||||||||| Sbjct: 23752271 aactattgcatcagagtttg 23752252
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 tctcctccaacatatttcca 384 |||||||||||||||||||| Sbjct: 27373776 tctcctccaacatatttcca 27373795
>gb|AC012354.11| Homo sapiens BAC clone RP11-89K21 from 2, complete sequence Length = 171167 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 atttccagacaaacaaattt 397 |||||||||||||||||||| Sbjct: 69592 atttccagacaaacaaattt 69611
>gb|DQ004562.1| Streptococcus mitis strain SK609 IgA1 protease (iga) gene, complete cds Length = 7553 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tgaagaccttgctaaacaaa 50 |||||||||||||||||||| Sbjct: 6068 tgaagaccttgctaaacaaa 6087
>gb|AC114814.5| Homo sapiens BAC clone RP11-1345D17 from 2, complete sequence Length = 181706 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 cttaacacaaaagagtctcc 369 |||||||||||||||||||| Sbjct: 144640 cttaacacaaaagagtctcc 144659
>dbj|AK223554.1| Homo sapiens mRNA for ATPase, H+ transporting, lysosomal V0 subunit a isoform 1 variant, clone: FCC126F11 Length = 2737 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 470 actattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| || ||||| |||| ||||| ||||||||||| Sbjct: 1317 actattatcacgttcccttttctatttgctgtgatgtttggaga 1360
>gb|AC092576.3| Homo sapiens BAC clone RP11-7N16 from 2, complete sequence Length = 152747 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 cttaacacaaaagagtctcc 369 |||||||||||||||||||| Sbjct: 11466 cttaacacaaaagagtctcc 11485
>gb|AC098691.2| Homo sapiens chromosome 1 clone RP11-509K22, complete sequence Length = 166885 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 atctggcaaagaaggaaaaatcaa 194 ||||| |||||||||||||||||| Sbjct: 69472 atctgacaaagaaggaaaaatcaa 69495
>dbj|AB183387.1| Danio rerio VGLUT2.2 mRNA for vesicular glutamate transporter 2.2, complete cds Length = 2608 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tgaacatgttgagcgttgatgtga 230 ||||||||||||| |||||||||| Sbjct: 812 tgaacatgttgagggttgatgtga 789
>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0029C06 Length = 156500 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aactattgcatcagagtttg 158 |||||||||||||||||||| Sbjct: 100347 aactattgcatcagagtttg 100328
>emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chromosome 2, complete sequence Length = 190808 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aaacaaacacatactgttca 63 |||||||||||||||||||| Sbjct: 150468 aaacaaacacatactgttca 150449
>gb|AF484489.1| HIV-1 isolate 99UGE23438 from Uganda, partial genome Length = 8811 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 659 tacacaggattaatatacaa 678 |||||||||||||||||||| Sbjct: 7322 tacacaggattaatatacaa 7341
>gb|AF173553.1|AF173553 Manduca sexta V-ATPase 110 kDa integral membrane subunit mRNA, complete cds Length = 5541 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 taccacactctgaacatgtt 216 |||||||||||||||||||| Sbjct: 1021 taccacactctgaacatgtt 1040
>gb|AC147872.3| Monodelphis domestica clone VMRC6-555H19, complete sequence Length = 139145 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 ctaatcaggttcaggatgca 295 |||||||||||||||||||| Sbjct: 69058 ctaatcaggttcaggatgca 69077
>gb|AY771592.1| HIV-1 isolate BREPM275 from Brazil, complete genome Length = 8671 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 659 tacacaggattaatatacaa 678 |||||||||||||||||||| Sbjct: 7353 tacacaggattaatatacaa 7372
>gb|AC007786.1|AC007786 Homo sapiens chromosome 19, BAC 41855 (CIT-B-32o4), complete sequence Length = 229061 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 tagttggtgagggctggagtccag 266 |||||||||||||||||| ||||| Sbjct: 39903 tagttggtgagggctggactccag 39880
>emb|CR926302.2| Xenopus tropicalis finished cDNA, clone TEgg022j20 Length = 3171 Score = 40.1 bits (20), Expect = 9.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 466 atacactattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||| || || ||||||||| | || ||||| ||||||||||| Sbjct: 1243 atacactatcattacctttcctttcctgtttgctgtgatgtttggaga 1290
>emb|BX005212.7| Zebrafish DNA sequence from clone DKEY-221H2 in linkage group 1, complete sequence Length = 272535 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 taaacaaacacatactgttc 62 |||||||||||||||||||| Sbjct: 43717 taaacaaacacatactgttc 43698
>gb|AC149051.4| Mus musculus BAC clone RP24-325F10 from 8, complete sequence Length = 184939 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 aaagatatcagagttaaagg 95 |||||||||||||||||||| Sbjct: 25628 aaagatatcagagttaaagg 25647
>gb|AC151476.1| Mus musculus BAC clone RP23-287H13 from 8, complete sequence Length = 155220 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 aaagatatcagagttaaagg 95 |||||||||||||||||||| Sbjct: 98588 aaagatatcagagttaaagg 98607
>emb|AL954858.10| Mouse DNA sequence from clone RP23-257H8 on chromosome X, complete sequence Length = 15546 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 661 cacaggattaatatacaatgaatt 684 |||||||||||||||||| ||||| Sbjct: 13507 cacaggattaatatacaaagaatt 13530
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 ctaatcaggttcaggatgca 295 |||||||||||||||||||| Sbjct: 1705385 ctaatcaggttcaggatgca 1705404
>emb|Z71460.1|HSVHATPS Homo sapiens mRNA for vacuolar-type H(+)-ATPase 115 kDa subunit Length = 3033 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 470 actattatcacttttcctttcttattcgctgtcatgtttggaga 513 ||||||||||| || ||||| |||| ||||| ||||||||||| Sbjct: 1352 actattatcacgttcccttttctatttgctgtgatgtttggaga 1395 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,134,483 Number of Sequences: 3902068 Number of extensions: 7134483 Number of successful extensions: 136240 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 135640 Number of HSP's gapped (non-prelim): 591 length of query: 691 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 668 effective length of database: 17,143,297,704 effective search space: 11451722866272 effective search space used: 11451722866272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)