| Clone Name | bags26c13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463462.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3249 Score = 40.1 bits (20), Expect = 1.2 Identities = 37/43 (86%) Strand = Plus / Plus Query: 27 ttaagccagagctatgcgaagctgtatctcttgacnatgacga 69 |||||| ||| | ||||||||||||| | |||||| ||||||| Sbjct: 1199 ttaagcaagaaccatgcgaagctgtaacccttgacgatgacga 1241
>gb|AC133531.2| Homo sapiens BAC clone RP11-529G15 from 4, complete sequence Length = 6483 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 aggtcaactgtcattaagcc 33 |||||||||||||||||||| Sbjct: 2923 aggtcaactgtcattaagcc 2904
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 1.2 Identities = 37/43 (86%) Strand = Plus / Minus Query: 27 ttaagccagagctatgcgaagctgtatctcttgacnatgacga 69 |||||| ||| | ||||||||||||| | |||||| ||||||| Sbjct: 32998283 ttaagcaagaaccatgcgaagctgtaacccttgacgatgacga 32998241
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 40.1 bits (20), Expect = 1.2 Identities = 37/43 (86%) Strand = Plus / Minus Query: 27 ttaagccagagctatgcgaagctgtatctcttgacnatgacga 69 |||||| ||| | ||||||||||||| | |||||| ||||||| Sbjct: 64511 ttaagcaagaaccatgcgaagctgtaacccttgacgatgacga 64469
>dbj|AK072094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F16, full insert sequence Length = 4261 Score = 40.1 bits (20), Expect = 1.2 Identities = 37/43 (86%) Strand = Plus / Plus Query: 27 ttaagccagagctatgcgaagctgtatctcttgacnatgacga 69 |||||| ||| | ||||||||||||| | |||||| ||||||| Sbjct: 1795 ttaagcaagaaccatgcgaagctgtaacccttgacgatgacga 1837
>dbj|AK072085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119B08, full insert sequence Length = 4303 Score = 40.1 bits (20), Expect = 1.2 Identities = 37/43 (86%) Strand = Plus / Plus Query: 27 ttaagccagagctatgcgaagctgtatctcttgacnatgacga 69 |||||| ||| | ||||||||||||| | |||||| ||||||| Sbjct: 1837 ttaagcaagaaccatgcgaagctgtaacccttgacgatgacga 1879
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 16 gtcaactgtcattaagcca 34 ||||||||||||||||||| Sbjct: 269695 gtcaactgtcattaagcca 269677
>gb|AC009166.4| Homo sapiens chromosome 16 clone RP11-80B1, complete sequence Length = 174550 Score = 38.2 bits (19), Expect = 4.8 Identities = 21/22 (95%) Strand = Plus / Minus Query: 81 ctgatctttgttngaaaaggag 102 |||||||||||| ||||||||| Sbjct: 138971 ctgatctttgtttgaaaaggag 138950
>gb|AC007498.7| Homo sapiens chromosome 16 clone RP11-424K7, complete sequence Length = 176248 Score = 38.2 bits (19), Expect = 4.8 Identities = 21/22 (95%) Strand = Plus / Minus Query: 81 ctgatctttgttngaaaaggag 102 |||||||||||| ||||||||| Sbjct: 109641 ctgatctttgtttgaaaaggag 109620 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 470,718 Number of Sequences: 3902068 Number of extensions: 470718 Number of successful extensions: 26428 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 26408 Number of HSP's gapped (non-prelim): 20 length of query: 106 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 85 effective length of database: 17,151,101,840 effective search space: 1457843656400 effective search space used: 1457843656400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)