ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags25n13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107437.1| Zea mays PCO062669 mRNA sequence 56 1e-04
2ref|XM_481458.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.13
3gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.13
4gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.13
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
6dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
7dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
8dbj|AK105754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
9dbj|AK100410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
10dbj|AB041352.1| Nicotiana tabacum cig3 mRNA, complete cds 44 0.53
11gb|AC102297.12| Mus musculus chromosome 1, clone RP24-392K18, co... 42 2.1
12ref|NM_121945.3| Arabidopsis thaliana unknown protein AT5G19400 ... 42 2.1
13gb|AC158925.4| Mus musculus chromosome 1, clone RP23-22I7, compl... 42 2.1
14gb|AC098887.4| Mus musculus BAC clone RP23-122N6 from 10, comple... 42 2.1
15emb|AL365495.14| Human DNA sequence from clone RP11-308K19 on ch... 42 2.1
16emb|AL117344.12|HSJ395C13 Human DNA sequence from clone RP3-395C... 42 2.1
17gb|AC120193.4| Homo sapiens chromosome 8, clone RP11-10H17, comp... 42 2.1
18gb|AC024958.8| Homo sapiens, clone RP11-561E1, complete sequence 42 2.1
19gb|AC153886.3| Mus musculus 10 BAC RP23-461H13 (Roswell Park Can... 42 2.1
20gb|AC154109.3| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 2.1
21gb|AF296837.1|F7K24 Arabidopsis thaliana BAC F7K24 42 2.1
22gb|AC154431.2| Mus musculus BAC clone RP23-174B22 from chromosom... 40 8.3
23ref|NM_001005288.1| Homo sapiens olfactory receptor, family 51, ... 40 8.3
24gb|AC023818.5| Homo sapiens chromosome 16 clone CTD-2600H12, com... 40 8.3
25gb|AC126031.2| Mus musculus BAC clone RP24-84F17 from chromosome... 40 8.3
26ref|XM_760953.1| Theileria parva strain Muguga chromosome 1 hypo... 40 8.3
27gb|AC146242.3| Pan troglodytes BAC clone CH251-163E9 from Y, com... 40 8.3
28emb|AL359736.19| Human DNA sequence from clone RP11-307N16 on ch... 40 8.3
29gb|AC024218.17| Homo sapiens 3 BAC RP11-668N23 (Roswell Park Can... 40 8.3
30gb|AC087237.14| Homo sapiens 12p BAC RP11-405A12 (Roswell Park C... 40 8.3
31emb|AL109853.4|HSJ765F13 Human DNA sequence from clone RP4-765F1... 40 8.3
32emb|AJ584639.1| Ambystoma mexicanum complete mitochondrial genome 40 8.3
33emb|AJ400626.1|HSA400626 Homo sapiens SIAH1 gene, exons 1-2 40 8.3
34gb|AC154879.10| Mus musculus chromosome 1, clone RP24-276N20, co... 40 8.3
35gb|AC104361.3| Homo sapiens chromosome 11, clone RP11-950A3, com... 40 8.3
36dbj|BS000633.3| Pan troglodytes chromosome Y clone: PTB-483C22, ... 40 8.3
37gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.3
38gb|AC024102.19| Homo sapiens 3 BAC RP11-252O10 (Roswell Park Can... 40 8.3
39gb|AC087380.3| Homo sapiens chromosome 11, clone RP11-454O22, co... 40 8.3
40gb|AC019163.8| Homo sapiens BAC clone RP11-87F15 from 4, complet... 40 8.3
41gb|AC073172.5| Homo sapiens chromosome 11, clone RP11-531H8, com... 40 8.3
42emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in l... 40 8.3
43gb|AC013660.9| Homo sapiens, clone RP11-20A14, complete sequence 40 8.3
44tpg|BK004429.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR... 40 8.3
45emb|BX296548.20| Pig DNA sequence from clone PigE-193I9, complet... 40 8.3
46dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
47gb|AC147710.3| Pan troglodytes BAC clone CH251-473C15 from chrom... 40 8.3
48gb|AF137396.2|AF137396 Homo sapiens ubiquilin 3, HOR 5'Beta14, H... 40 8.3
49gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complet... 40 8.3
50gb|AC011289.4|AC011289 Homo sapiens BAC clone RP11-59K8 from Y, ... 40 8.3
51gb|AY659995.1| Ambystoma calforniense mitochondrion, complete ge... 40 8.3
52gb|AY659994.1| Ambystoma dumerilii mitochondrion, complete genome 40 8.3
53gb|AY659993.1| Ambystoma andersoni mitochondrion, complete genome 40 8.3
54gb|AY659992.1| Ambystoma tigrinum tigrinum mitochondrion, comple... 40 8.3
55gb|AY659991.1| Ambystoma mexicanum mitochondrion, complete genome 40 8.3
56gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 8.3
57gb|AC158911.7| Mus musculus chromosome 5, clone RP24-363D4, comp... 40 8.3
58dbj|AP000866.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.3
59gb|AC174459.2| Mus musculus BAC clone RP23-358J23 from chromosom... 40 8.3
60emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4,... 40 8.3
61gb|CP000209.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.3 
>gb|AY107437.1| Zea mays PCO062669 mRNA sequence
          Length = 1217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                       
Query: 467 tgttaaatttcttttggagaatggtggtcttggaagcatagcaagtgctgctgttaggtt 526
           |||||||||||||||| || ||||||||||| |||||||  |||  |||||| |||||||
Sbjct: 617 tgttaaatttcttttg-agcatggtggtctttgaagcatgacaatggctgctcttaggtt 675

               
Query: 527 tggg 530
           ||||
Sbjct: 676 tggg 679



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 134/169 (79%), Gaps = 3/169 (1%)
 Strand = Plus / Plus

                                                                       
Query: 132 cagcagtgcattcaccactcccttccctttccctgggaaacagcaggtttctggggtgca 191
           ||||| ||||||  ||||||| ||||| |||||||||||||| ||| | |||||| ||||
Sbjct: 294 cagcactgcatttgccactccattccccttccctgggaaacaacagttatctgggatgca 353

                                                                       
Query: 192 caccctaggggccag---tgagaaaacatggcaagatttccacctttttgaccctgcaaa 248
             | | |||||| |    ||| || ||||||||||||||||  |||||||| ||| ||||
Sbjct: 354 tgcacaaggggctacaaatgaaaagacatggcaagatttccgtctttttgagccttcaaa 413

                                                            
Query: 249 gcagaatatggttcaaaaccaccaacaaattaatcagcacagtggtcaa 297
            ||||| ||| | |||||  |||| ||||  |||||||| | |||||||
Sbjct: 414 acagaacatgctccaaaattaccaccaaagaaatcagcaaaatggtcaa 462



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 46  gatgattacagctggctggatggttaccagccatcaatggaacatgtt 93
           ||||||||||||||||| |||||||| |||| ||| || || ||||||
Sbjct: 210 gatgattacagctggctagatggttatcagcaatcgattgatcatgtt 257
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>ref|XM_481458.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3030

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 131  ccagcagtgcattcaccactcccttccctttccctgggaaaca 173
            |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 2813 ccagcagtactttcaccactccctttccttttcctggaaaaca 2855
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>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09,
             complete sequence
          Length = 178320

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 131   ccagcagtgcattcaccactcccttccctttccctgggaaaca 173
             |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 20929 ccagcagtactttcaccactccctttccttttcctggaaaaca 20971



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 474   tttcttttggagaatggtggtcttggaagcatagcaagtgct 515
             |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 21375 tttcttttggaagatgcttgtcttggaagcataacaagtgct 21416
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>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
             complete sequence
          Length = 187972

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 131   ccagcagtgcattcaccactcccttccctttccctgggaaaca 173
             |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 56006 ccagcagtactttcaccactccctttccttttcctggaaaaca 55964



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 474   tttcttttggagaatggtggtcttggaagcatagcaagtgct 515
             |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 55560 tttcttttggaagatgcttgtcttggaagcataacaagtgct 55519
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 131      ccagcagtgcattcaccactcccttccctttccctgggaaaca 173
                |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 12718827 ccagcagtactttcaccactccctttccttttcctggaaaaca 12718785



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 474      tttcttttggagaatggtggtcttggaagcatagcaagtgct 515
                |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 12718381 tttcttttggaagatgcttgtcttggaagcataacaagtgct 12718340
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>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0058D03
          Length = 184235

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 131   ccagcagtgcattcaccactcccttccctttccctgggaaaca 173
             |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 62822 ccagcagtactttcaccactccctttccttttcctggaaaaca 62780



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 474   tttcttttggagaatggtggtcttggaagcatagcaagtgct 515
             |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 62376 tttcttttggaagatgcttgtcttggaagcataacaagtgct 62335
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>dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0051M20
          Length = 152702

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 131    ccagcagtgcattcaccactcccttccctttccctgggaaaca 173
              |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 104796 ccagcagtactttcaccactccctttccttttcctggaaaaca 104754



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 474    tttcttttggagaatggtggtcttggaagcatagcaagtgct 515
              |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 104350 tttcttttggaagatgcttgtcttggaagcataacaagtgct 104309
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>dbj|AK105754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C07, full
            insert sequence
          Length = 3365

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 131  ccagcagtgcattcaccactcccttccctttccctgggaaaca 173
            |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 2452 ccagcagtactttcaccactccctttccttttcctggaaaaca 2494



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 474  tttcttttggagaatggtggtcttggaagcatagcaagtgct 515
            |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 2771 tttcttttggaagatgcttgtcttggaagcataacaagtgct 2812
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>dbj|AK100410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087H17, full
            insert sequence
          Length = 4003

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 131  ccagcagtgcattcaccactcccttccctttccctgggaaaca 173
            |||||||| | |||||||||||||| ||||| ||||| |||||
Sbjct: 3161 ccagcagtactttcaccactccctttccttttcctggaaaaca 3203



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 474  tttcttttggagaatggtggtcttggaagcatagcaagtgct 515
            |||||||||||  ||| | |||||||||||||| ||||||||
Sbjct: 3481 tttcttttggaagatgcttgtcttggaagcataacaagtgct 3522
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>dbj|AB041352.1| Nicotiana tabacum cig3 mRNA, complete cds
          Length = 3333

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 153  cttccctttccctgggaaacag 174
            ||||||||||||||||||||||
Sbjct: 2570 cttccctttccctgggaaacag 2591
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>gb|AC102297.12| Mus musculus chromosome 1, clone RP24-392K18, complete sequence
          Length = 167248

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 143   tcaccactcccttccctttcc 163
             |||||||||||||||||||||
Sbjct: 99742 tcaccactcccttccctttcc 99722
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>ref|NM_121945.3| Arabidopsis thaliana unknown protein AT5G19400 mRNA, complete cds
          Length = 3919

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 46   gatgattacagctggctggatggttacca 74
            ||||||||||||||| ||||||| |||||
Sbjct: 3038 gatgattacagctggttggatggatacca 3066
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>gb|AC158925.4| Mus musculus chromosome 1, clone RP23-22I7, complete sequence
          Length = 181897

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 143    tcaccactcccttccctttcc 163
              |||||||||||||||||||||
Sbjct: 144448 tcaccactcccttccctttcc 144468
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>gb|AC098887.4| Mus musculus BAC clone RP23-122N6 from 10, complete sequence
          Length = 211397

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    taactcaaaagctatttatct 116
             |||||||||||||||||||||
Sbjct: 48154 taactcaaaagctatttatct 48174
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>emb|AL365495.14| Human DNA sequence from clone RP11-308K19 on chromosome 10 Contains
             part of the gene for a novel protein (FLJ10210), complete
             sequence
          Length = 185049

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 159   tttccctgggaaacagcaggt 179
             |||||||||||||||||||||
Sbjct: 37868 tttccctgggaaacagcaggt 37848
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>emb|AL117344.12|HSJ395C13 Human DNA sequence from clone RP3-395C13 on chromosome 6q25.2-26
             Contains the 5' end of a novel gene, a hypothetical
             protein PNAS-131 pseudogene and a CpG island, complete
             sequence
          Length = 150336

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 209   agaaaacatggcaagatttccacct 233
             ||||||||||||||| |||||||||
Sbjct: 26489 agaaaacatggcaaggtttccacct 26513
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>gb|AC120193.4| Homo sapiens chromosome 8, clone RP11-10H17, complete sequence
          Length = 174556

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 546    ggggccagttggaggttggagggtg 570
              ||||||||||||||| |||||||||
Sbjct: 115045 ggggccagttggagggtggagggtg 115069
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>gb|AC024958.8| Homo sapiens, clone RP11-561E1, complete sequence
          Length = 190534

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 546    ggggccagttggaggttggagggtg 570
              ||||||||||||||| |||||||||
Sbjct: 143858 ggggccagttggagggtggagggtg 143834
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>gb|AC153886.3| Mus musculus 10 BAC RP23-461H13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 155429

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    taactcaaaagctatttatct 116
             |||||||||||||||||||||
Sbjct: 68071 taactcaaaagctatttatct 68091
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>gb|AC154109.3| Ornithorhynchus anatinus chromosome UNK clone OABb-200A1, complete
             sequence
          Length = 180985

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 151   cccttccctttccctgggaaa 171
             |||||||||||||||||||||
Sbjct: 78043 cccttccctttccctgggaaa 78063
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>gb|AF296837.1|F7K24 Arabidopsis thaliana BAC F7K24
          Length = 103024

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 46    gatgattacagctggctggatggttacca 74
             ||||||||||||||| ||||||| |||||
Sbjct: 71076 gatgattacagctggttggatggatacca 71104
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>gb|AC154431.2| Mus musculus BAC clone RP23-174B22 from chromosome 13, complete sequence
          Length = 195030

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     ataactcaaaagctatttat 114
              ||||||||||||||||||||
Sbjct: 174785 ataactcaaaagctatttat 174804
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>ref|NM_001005288.1| Homo sapiens olfactory receptor, family 51, subfamily I, member 1
           (OR51I1), mRNA
          Length = 945

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 ttcaccactcccttccctttccct 165
           |||||||||| |||||||||||||
Sbjct: 463 ttcaccactctcttccctttccct 486
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>gb|AC023818.5| Homo sapiens chromosome 16 clone CTD-2600H12, complete sequence
          Length = 173304

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   ccactcccttccctttccct 165
             ||||||||||||||||||||
Sbjct: 59349 ccactcccttccctttccct 59330
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>gb|AC126031.2| Mus musculus BAC clone RP24-84F17 from chromosome 19, complete sequence
          Length = 217220

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 142   ttcaccactcccttccctttccct 165
             ||||||| ||||||||||||||||
Sbjct: 69638 ttcaccaatcccttccctttccct 69661
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>ref|XM_760953.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
           (TP01_0526) partial mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 20  ttgagaagctgcagcaccaa 39
           ||||||||||||||||||||
Sbjct: 170 ttgagaagctgcagcaccaa 189
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>gb|AC146242.3| Pan troglodytes BAC clone CH251-163E9 from Y, complete sequence
          Length = 142863

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   gccagtgagaaaacatggca 221
             ||||||||||||||||||||
Sbjct: 31682 gccagtgagaaaacatggca 31663
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>emb|AL359736.19| Human DNA sequence from clone RP11-307N16 on chromosome 13 Contains the
             gene for a novel protein (FLJ31208), three novel genes, a
             novel pseudogene and three CpG islands, complete sequence
          Length = 178850

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ttccctgggaaacagcaggt 179
             ||||||||||||||||||||
Sbjct: 93506 ttccctgggaaacagcaggt 93487
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>gb|AC024218.17| Homo sapiens 3 BAC RP11-668N23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 141860

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    cctgcagccctttcatagtg 468
              ||||||||||||||||||||
Sbjct: 110293 cctgcagccctttcatagtg 110312
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>gb|AC087237.14| Homo sapiens 12p BAC RP11-405A12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166380

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    agtgttaaatttcttttgga 484
              ||||||||||||||||||||
Sbjct: 133357 agtgttaaatttcttttgga 133338
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>emb|AL109853.4|HSJ765F13 Human DNA sequence from clone RP4-765F13 on chromosome Xq25-26.2
            Contains two seven transmembrane helix receptor
            pseudogenes and the gene for a novel protein similar to
            part of hepatoma-derived growth factor (high-mobility
            group protein 1-like) (HDGF), complete sequence
          Length = 106465

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 216  atggcaagatttccacctttttga 239
            |||||||||||||| |||||||||
Sbjct: 8419 atggcaagatttcctcctttttga 8442
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>emb|AJ584639.1| Ambystoma mexicanum complete mitochondrial genome
          Length = 16369

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   caccaacagatcgatgatta 53
            ||||||||||||||||||||
Sbjct: 8014 caccaacagatcgatgatta 8033
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>emb|AJ400626.1|HSA400626 Homo sapiens SIAH1 gene, exons 1-2
          Length = 31705

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   ccactcccttccctttccct 165
             ||||||||||||||||||||
Sbjct: 20553 ccactcccttccctttccct 20534
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>gb|AC154879.10| Mus musculus chromosome 1, clone RP24-276N20, complete sequence
          Length = 199527

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    cctttccctgggaaacagca 176
              ||||||||||||||||||||
Sbjct: 154657 cctttccctgggaaacagca 154676
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>gb|AC104361.3| Homo sapiens chromosome 11, clone RP11-950A3, complete sequence
          Length = 145172

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   tcaccactcccttccctttc 162
             ||||||||||||||||||||
Sbjct: 36561 tcaccactcccttccctttc 36542
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>dbj|BS000633.3| Pan troglodytes chromosome Y clone: PTB-483C22, complete sequence
          Length = 129300

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   gccagtgagaaaacatggca 221
             ||||||||||||||||||||
Sbjct: 46923 gccagtgagaaaacatggca 46942
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 202      gccagtgagaaaacatggca 221
                ||||||||||||||||||||
Sbjct: 20273245 gccagtgagaaaacatggca 20273226
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>gb|AC024102.19| Homo sapiens 3 BAC RP11-252O10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 148163

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    actcaaaagctatttatctt 117
             ||||||||||||||||||||
Sbjct: 90358 actcaaaagctatttatctt 90377
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>gb|AC087380.3| Homo sapiens chromosome 11, clone RP11-454O22, complete sequence
          Length = 200723

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 142   ttcaccactcccttccctttccct 165
             |||||||||| |||||||||||||
Sbjct: 86796 ttcaccactctcttccctttccct 86773
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>gb|AC019163.8| Homo sapiens BAC clone RP11-87F15 from 4, complete sequence
          Length = 217921

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 544   ccggggccagttggaggttggagggtga 571
             ||||||||||| || |||||||||||||
Sbjct: 31831 ccggggccagtggggggttggagggtga 31804
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>gb|AC073172.5| Homo sapiens chromosome 11, clone RP11-531H8, complete sequence
          Length = 168080

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    tcaccactcccttccctttc 162
              ||||||||||||||||||||
Sbjct: 149287 tcaccactcccttccctttc 149268
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>emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in linkage group 24, complete
              sequence
          Length = 213917

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 480    ttggagaatggtggtcttgg 499
              ||||||||||||||||||||
Sbjct: 124798 ttggagaatggtggtcttgg 124779
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>gb|AC013660.9| Homo sapiens, clone RP11-20A14, complete sequence
          Length = 164324

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 55     agctggctggatggttaccagcca 78
              |||||||||||||||| |||||||
Sbjct: 118453 agctggctggatggttcccagcca 118430
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>tpg|BK004429.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR11-39 gene,
           complete cds
          Length = 945

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 ttcaccactcccttccctttccct 165
           |||||||||| |||||||||||||
Sbjct: 463 ttcaccactctcttccctttccct 486
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>emb|BX296548.20| Pig DNA sequence from clone PigE-193I9, complete sequence
          Length = 172252

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 547  gggccagttggaggttggag 566
            ||||||||||||||||||||
Sbjct: 6321 gggccagttggaggttggag 6302
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 297      agtggcagaaaagcagccggcaaa 320
                ||||||||||||||||| ||||||
Sbjct: 30330431 agtggcagaaaagcagcaggcaaa 30330454
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>gb|AC147710.3| Pan troglodytes BAC clone CH251-473C15 from chromosome y, complete
             sequence
          Length = 200403

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   gccagtgagaaaacatggca 221
             ||||||||||||||||||||
Sbjct: 35055 gccagtgagaaaacatggca 35074
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>gb|AF137396.2|AF137396 Homo sapiens ubiquilin 3, HOR 5'Beta14, HOR5'Beta13, HOR5'Beta12, and
             HOR5'Beta11 genes, complete cds; HOR 5'Beta10 and
             HOR5'Beta9 pseudogenes, complete sequence; HOR5'Beta8 and
             HOR5'Beta7 genes, complete cds; CHR11ORF1 and amphiphysin
             pseudogenes, complete sequence; HOR5'Beta6 and HOR5'Beta5
             genes, complete cds; HOR5'Beta4 pseudogene, complete
             sequence; HOR 5'Beta3 genes, complete cds; HOR5'Beta2
             pseudogene, complete sequence; and HOR 5'Beta1 gene,
             complete cds
          Length = 219955

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 142   ttcaccactcccttccctttccct 165
             |||||||||| |||||||||||||
Sbjct: 71768 ttcaccactctcttccctttccct 71791
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>gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complete sequence
          Length = 166660

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   agtgttaaatttcttttgga 484
             ||||||||||||||||||||
Sbjct: 53526 agtgttaaatttcttttgga 53545
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>gb|AC011289.4|AC011289 Homo sapiens BAC clone RP11-59K8 from Y, complete sequence
          Length = 80537

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   gccagtgagaaaacatggca 221
             ||||||||||||||||||||
Sbjct: 22214 gccagtgagaaaacatggca 22233
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>gb|AY659995.1| Ambystoma calforniense mitochondrion, complete genome
          Length = 16374

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   caccaacagatcgatgatta 53
            ||||||||||||||||||||
Sbjct: 8018 caccaacagatcgatgatta 8037
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>gb|AY659994.1| Ambystoma dumerilii mitochondrion, complete genome
          Length = 16370

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   caccaacagatcgatgatta 53
            ||||||||||||||||||||
Sbjct: 8015 caccaacagatcgatgatta 8034
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>gb|AY659993.1| Ambystoma andersoni mitochondrion, complete genome
          Length = 16370

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   caccaacagatcgatgatta 53
            ||||||||||||||||||||
Sbjct: 8015 caccaacagatcgatgatta 8034
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>gb|AY659992.1| Ambystoma tigrinum tigrinum mitochondrion, complete genome
          Length = 16375

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   caccaacagatcgatgatta 53
            ||||||||||||||||||||
Sbjct: 8019 caccaacagatcgatgatta 8038
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>gb|AY659991.1| Ambystoma mexicanum mitochondrion, complete genome
          Length = 16370

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   caccaacagatcgatgatta 53
            ||||||||||||||||||||
Sbjct: 8015 caccaacagatcgatgatta 8034
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    agtgttaaatttcttttgga 484
              ||||||||||||||||||||
Sbjct: 869772 agtgttaaatttcttttgga 869791
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>gb|AC158911.7| Mus musculus chromosome 5, clone RP24-363D4, complete sequence
          Length = 119381

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 578   tttggactgtttgatggggatgaa 601
             |||||||||||| |||||||||||
Sbjct: 74754 tttggactgttttatggggatgaa 74777
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>dbj|AP000866.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-677M14, complete
              sequence
          Length = 187960

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 141    attcaccactcccttccctttccc 164
              |||| |||||||||||||||||||
Sbjct: 142254 attctccactcccttccctttccc 142277
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>gb|AC174459.2| Mus musculus BAC clone RP23-358J23 from chromosome 13, complete sequence
          Length = 229410

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     ataactcaaaagctatttat 114
              ||||||||||||||||||||
Sbjct: 204521 ataactcaaaagctatttat 204502
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>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12,
             complete sequence
          Length = 160989

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 297   agtggcagaaaagcagccggcaaa 320
             ||||||||||||||||| ||||||
Sbjct: 80327 agtggcagaaaagcagcaggcaaa 80350
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>gb|CP000209.1| Drosophila melanogaster genomic scaffold 211000022280773
          Length = 49681

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   aagcatagcaagtgctgctg 519
             ||||||||||||||||||||
Sbjct: 23026 aagcatagcaagtgctgctg 23045


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,810,971
Number of Sequences: 3902068
Number of extensions: 5810971
Number of successful extensions: 118971
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118739
Number of HSP's gapped (non-prelim): 231
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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