ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags26c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468972.1| Oryza sativa (japonica cultivar-group), mRNA 188 1e-44
2dbj|AK068169.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
3dbj|AK059181.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 117 4e-23
5gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genom... 117 4e-23
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
7gb|AC091205.3| Drosophila melanogaster 3L BAC RP98-22N9 (Roswell... 46 0.12
8gb|AC010018.6| Drosophila melanogaster 3L BAC RP98-17M19 (Roswel... 46 0.12
9gb|AE003478.3| Drosophila melanogaster chromosome 3L, section 12... 46 0.12
10gb|AC004356.1|AC004356 Drosophila melanogaster DNA sequence (P1 ... 46 0.12
11ref|NM_103665.2| Arabidopsis thaliana unknown protein AT1G47720 ... 44 0.47
12gb|BT005269.1| Arabidopsis thaliana At1g47720 mRNA, complete cds 44 0.47
13gb|AC012463.4|AC012463 Genomic sequence for Arabidopsis thaliana... 44 0.47
14dbj|AK119114.1| Arabidopsis thaliana At1g47720 mRNA for unknown ... 44 0.47
15gb|AC007519.2|F16N3 Sequence of BAC F16N3 from Arabidopsis thali... 44 0.47
16emb|AL034422.24|HS1141E15 Human DNA sequence from clone RP5-1141... 42 1.9
17dbj|AK153652.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 1.9
18gb|AC067971.5|F10K1 Sequence of BAC F10K1 from Arabidopsis thali... 42 1.9
19emb|AL671993.7| Mouse DNA sequence from clone RP23-428E5 on chro... 42 1.9
20gb|AC153076.3| Aotus nancymaae clone CH258-449A9, complete sequence 40 7.4
21gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold 40 7.4
22gb|AC148204.4| Callicebus moloch clone LB5-291I14, complete sequ... 40 7.4
23gb|AC165273.2| Mus musculus BAC clone RP24-267I1 from chromosome... 40 7.4
24gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome... 40 7.4
25gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome... 40 7.4
26gb|AC124742.4| Mus musculus BAC clone RP23-210N16 from 12, compl... 40 7.4
27gb|AC159168.3| Callicebus moloch clone LB5-83N20, complete sequence 40 7.4
28emb|AL031906.1|HS90O12 Human DNA sequence from clone RP1-90O12 o... 40 7.4
29emb|X81995.1|NRCATHB N.rustica mRNA for cathepsin B-like cystein... 40 7.4
30gb|AC148489.3| Saimiri boliviensis boliviensis clone CH254-475P8... 40 7.4
31gb|AC146740.3| Callithrix jacchus clone CH259-204H2, complete se... 40 7.4
32gb|AC093320.24| Mus musculus strain C57BL/6J chromosome 1 clone ... 40 7.4
33gb|AF231351.1|AF231351 Nicotiana tabacum plastidic glucose 6-pho... 40 7.4
34emb|CT030176.18| Mouse DNA sequence from clone RP23-142L17 on ch... 40 7.4
35gb|U43145.1|PCU43145 Plasmodium chabaudi repeat organellar prote... 40 7.4
36gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.4
37gb|AC102310.11| Mus musculus chromosome 7, clone RP24-426A19, co... 40 7.4
38gb|AC160530.8| Mus musculus chromosome 1, clone RP24-225F15, com... 40 7.4
39gb|DP000019.1| Callicebus moloch target 1 genomic scaffold 40 7.4
40emb|AL831772.3| Mouse DNA sequence from clone RP23-320K18 on chr... 40 7.4
41emb|AL671671.5| Mouse DNA sequence from clone RP23-419D6 on chro... 40 7.4 
>ref|XM_468972.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1206

 Score =  188 bits (95), Expect = 1e-44
 Identities = 221/263 (84%)
 Strand = Plus / Plus

                                                                       
Query: 11  tcctctcgttcaactgaagcactgtggcaagcattcttcgctaatcctcttgactggtgg 70
           ||||| ||||||||||||    |||||||||| ||||| ||||||||| |||||||||||
Sbjct: 690 tcctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtgg 749

                                                                       
Query: 71  gataacaggaaagataagaagaacccaaggtatccagacttcaagcacaagagcaccggt 130
           |||||||||| | ||||||||||||| |||||||||||||||||||||||   |||||||
Sbjct: 750 gataacaggacaaataagaagaacccgaggtatccagacttcaagcacaaacacaccggt 809

                                                                       
Query: 131 gaggcgctgtgggttgaggggaggaacaaccccaactgggtcgtctcccagctggcgatc 190
           || ||  |||||||||| ||||||||||| || || |||||  |||||||| |||| || 
Sbjct: 810 gaagcattgtgggttgatgggaggaacaatccaaattgggttatctcccagttggcaatt 869

                                                                       
Query: 191 ttggactcgaggatgggttccctgcaggacaagcagaggaaaccagtctcctacatgtat 250
            |||||||||| |||||||| || || | |||  | |||||||||||  |||  ||||||
Sbjct: 870 ctggactcgagaatgggttctcttcaaggcaatgataggaaaccagttgcctttatgtat 929

                                  
Query: 251 gccgacgacttcatgacatctga 273
           || || |||||||||||| ||||
Sbjct: 930 gctgatgacttcatgacacctga 952
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>dbj|AK068169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129H11, full
           insert sequence
          Length = 1208

 Score =  188 bits (95), Expect = 1e-44
 Identities = 221/263 (84%)
 Strand = Plus / Plus

                                                                       
Query: 11  tcctctcgttcaactgaagcactgtggcaagcattcttcgctaatcctcttgactggtgg 70
           ||||| ||||||||||||    |||||||||| ||||| ||||||||| |||||||||||
Sbjct: 692 tcctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtgg 751

                                                                       
Query: 71  gataacaggaaagataagaagaacccaaggtatccagacttcaagcacaagagcaccggt 130
           |||||||||| | ||||||||||||| |||||||||||||||||||||||   |||||||
Sbjct: 752 gataacaggacaaataagaagaacccgaggtatccagacttcaagcacaaacacaccggt 811

                                                                       
Query: 131 gaggcgctgtgggttgaggggaggaacaaccccaactgggtcgtctcccagctggcgatc 190
           || ||  |||||||||| ||||||||||| || || |||||  |||||||| |||| || 
Sbjct: 812 gaagcattgtgggttgatgggaggaacaatccaaattgggttatctcccagttggcaatt 871

                                                                       
Query: 191 ttggactcgaggatgggttccctgcaggacaagcagaggaaaccagtctcctacatgtat 250
            |||||||||| |||||||| || || | |||  | |||||||||||  |||  ||||||
Sbjct: 872 ctggactcgagaatgggttctcttcaaggcaatgataggaaaccagttgcctttatgtat 931

                                  
Query: 251 gccgacgacttcatgacatctga 273
           || || |||||||||||| ||||
Sbjct: 932 gctgatgacttcatgacacctga 954
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>dbj|AK059181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-G01, full
           insert sequence
          Length = 1323

 Score =  188 bits (95), Expect = 1e-44
 Identities = 221/263 (84%)
 Strand = Plus / Plus

                                                                       
Query: 11  tcctctcgttcaactgaagcactgtggcaagcattcttcgctaatcctcttgactggtgg 70
           ||||| ||||||||||||    |||||||||| ||||| ||||||||| |||||||||||
Sbjct: 676 tcctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtgg 735

                                                                       
Query: 71  gataacaggaaagataagaagaacccaaggtatccagacttcaagcacaagagcaccggt 130
           |||||||||| | ||||||||||||| |||||||||||||||||||||||   |||||||
Sbjct: 736 gataacaggacaaataagaagaacccgaggtatccagacttcaagcacaaacacaccggt 795

                                                                       
Query: 131 gaggcgctgtgggttgaggggaggaacaaccccaactgggtcgtctcccagctggcgatc 190
           || ||  |||||||||| ||||||||||| || || |||||  |||||||| |||| || 
Sbjct: 796 gaagcattgtgggttgatgggaggaacaatccaaattgggttatctcccagttggcaatt 855

                                                                       
Query: 191 ttggactcgaggatgggttccctgcaggacaagcagaggaaaccagtctcctacatgtat 250
            |||||||||| |||||||| || || | |||  | |||||||||||  |||  ||||||
Sbjct: 856 ctggactcgagaatgggttctcttcaaggcaatgataggaaaccagttgcctttatgtat 915

                                  
Query: 251 gccgacgacttcatgacatctga 273
           || || |||||||||||| ||||
Sbjct: 916 gctgatgacttcatgacacctga 938
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  117 bits (59), Expect = 4e-23
 Identities = 155/187 (82%)
 Strand = Plus / Minus

                                                                            
Query: 87       agaagaacccaaggtatccagacttcaagcacaagagcaccggtgaggcgctgtgggttg 146
                |||||||||| |||||||||||||||||||||||   ||||||||| ||  |||||||||
Sbjct: 24103254 agaagaacccgaggtatccagacttcaagcacaaacacaccggtgaagcattgtgggttg 24103195

                                                                            
Query: 147      aggggaggaacaaccccaactgggtcgtctcccagctggcgatcttggactcgaggatgg 206
                | ||||||||||| || || |||||  |||||||| |||| ||  |||||||||| ||||
Sbjct: 24103194 atgggaggaacaatccaaattgggttatctcccagttggcaattctggactcgagaatgg 24103135

                                                                            
Query: 207      gttccctgcaggacaagcagaggaaaccagtctcctacatgtatgccgacgacttcatga 266
                |||| || || | |||  | |||||||||||  |||  |||||||| || ||||||||||
Sbjct: 24103134 gttctcttcaaggcaatgataggaaaccagttgcctttatgtatgctgatgacttcatga 24103075

                       
Query: 267      catctga 273
                || ||||
Sbjct: 24103074 cacctga 24103068



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                            
Query: 11       tcctctcgttcaactgaagcactgtggcaagcattcttcgctaatcctcttgactggtgg 70
                ||||| ||||||||||||    |||||||||| ||||| ||||||||| |||||||||||
Sbjct: 24104738 tcctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtgg 24104679

                          
Query: 71       gataacagga 80
                ||||||||||
Sbjct: 24104678 gataacagga 24104669
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>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete
              sequence
          Length = 140980

 Score =  117 bits (59), Expect = 4e-23
 Identities = 155/187 (82%)
 Strand = Plus / Plus

                                                                          
Query: 87     agaagaacccaaggtatccagacttcaagcacaagagcaccggtgaggcgctgtgggttg 146
              |||||||||| |||||||||||||||||||||||   ||||||||| ||  |||||||||
Sbjct: 120578 agaagaacccgaggtatccagacttcaagcacaaacacaccggtgaagcattgtgggttg 120637

                                                                          
Query: 147    aggggaggaacaaccccaactgggtcgtctcccagctggcgatcttggactcgaggatgg 206
              | ||||||||||| || || |||||  |||||||| |||| ||  |||||||||| ||||
Sbjct: 120638 atgggaggaacaatccaaattgggttatctcccagttggcaattctggactcgagaatgg 120697

                                                                          
Query: 207    gttccctgcaggacaagcagaggaaaccagtctcctacatgtatgccgacgacttcatga 266
              |||| || || | |||  | |||||||||||  |||  |||||||| || ||||||||||
Sbjct: 120698 gttctcttcaaggcaatgataggaaaccagttgcctttatgtatgctgatgacttcatga 120757

                     
Query: 267    catctga 273
              || ||||
Sbjct: 120758 cacctga 120764



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                          
Query: 11     tcctctcgttcaactgaagcactgtggcaagcattcttcgctaatcctcttgactggtgg 70
              ||||| ||||||||||||    |||||||||| ||||| ||||||||| |||||||||||
Sbjct: 119094 tcctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtgg 119153

                        
Query: 71     gataacagga 80
              ||||||||||
Sbjct: 119154 gataacagga 119163
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  117 bits (59), Expect = 4e-23
 Identities = 155/187 (82%)
 Strand = Plus / Minus

                                                                            
Query: 87       agaagaacccaaggtatccagacttcaagcacaagagcaccggtgaggcgctgtgggttg 146
                |||||||||| |||||||||||||||||||||||   ||||||||| ||  |||||||||
Sbjct: 24019541 agaagaacccgaggtatccagacttcaagcacaaacacaccggtgaagcattgtgggttg 24019482

                                                                            
Query: 147      aggggaggaacaaccccaactgggtcgtctcccagctggcgatcttggactcgaggatgg 206
                | ||||||||||| || || |||||  |||||||| |||| ||  |||||||||| ||||
Sbjct: 24019481 atgggaggaacaatccaaattgggttatctcccagttggcaattctggactcgagaatgg 24019422

                                                                            
Query: 207      gttccctgcaggacaagcagaggaaaccagtctcctacatgtatgccgacgacttcatga 266
                |||| || || | |||  | |||||||||||  |||  |||||||| || ||||||||||
Sbjct: 24019421 gttctcttcaaggcaatgataggaaaccagttgcctttatgtatgctgatgacttcatga 24019362

                       
Query: 267      catctga 273
                || ||||
Sbjct: 24019361 cacctga 24019355



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                            
Query: 11       tcctctcgttcaactgaagcactgtggcaagcattcttcgctaatcctcttgactggtgg 70
                ||||| ||||||||||||    |||||||||| ||||| ||||||||| |||||||||||
Sbjct: 24021025 tcctcccgttcaactgaacagttgtggcaagccttctttgctaatccttttgactggtgg 24020966

                          
Query: 71       gataacagga 80
                ||||||||||
Sbjct: 24020965 gataacagga 24020956
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>gb|AC091205.3| Drosophila melanogaster 3L BAC RP98-22N9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170836

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 86     aagaagaacccaaggtatccaga 108
              |||||||||||||||||||||||
Sbjct: 137217 aagaagaacccaaggtatccaga 137195
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>gb|AC010018.6| Drosophila melanogaster 3L BAC RP98-17M19 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 172284

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 86     aagaagaacccaaggtatccaga 108
              |||||||||||||||||||||||
Sbjct: 163188 aagaagaacccaaggtatccaga 163210
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>gb|AE003478.3| Drosophila melanogaster chromosome 3L, section 12 of 83 of the complete
             sequence
          Length = 317354

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 86    aagaagaacccaaggtatccaga 108
             |||||||||||||||||||||||
Sbjct: 74446 aagaagaacccaaggtatccaga 74468
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>gb|AC004356.1|AC004356 Drosophila melanogaster DNA sequence (P1 DS01105 (D259)), complete
             sequence
          Length = 71343

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 86    aagaagaacccaaggtatccaga 108
             |||||||||||||||||||||||
Sbjct: 18145 aagaagaacccaaggtatccaga 18167
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>ref|NM_103665.2| Arabidopsis thaliana unknown protein AT1G47720 mRNA, complete cds
          Length = 969

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 65  tggtgggataacaggaaagataagaagaacccaa 98
           |||||||| ||||||| | |||||||||||||||
Sbjct: 619 tggtgggacaacaggagaaataagaagaacccaa 652
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>gb|BT005269.1| Arabidopsis thaliana At1g47720 mRNA, complete cds
          Length = 786

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 65  tggtgggataacaggaaagataagaagaacccaa 98
           |||||||| ||||||| | |||||||||||||||
Sbjct: 595 tggtgggacaacaggagaaataagaagaacccaa 628
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>gb|AC012463.4|AC012463 Genomic sequence for Arabidopsis thaliana BAC T2E6 from chromosome I,
             complete sequence
          Length = 95816

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 65    tggtgggataacaggaaagataagaagaacccaa 98
             |||||||| ||||||| | |||||||||||||||
Sbjct: 81694 tggtgggacaacaggagaaataagaagaacccaa 81727
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>dbj|AK119114.1| Arabidopsis thaliana At1g47720 mRNA for unknown protein, complete
           cds, clone: RAFL21-47-D06
          Length = 969

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 65  tggtgggataacaggaaagataagaagaacccaa 98
           |||||||| ||||||| | |||||||||||||||
Sbjct: 619 tggtgggacaacaggagaaataagaagaacccaa 652
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>gb|AC007519.2|F16N3 Sequence of BAC F16N3 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 171769

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 65   tggtgggataacaggaaagataagaagaacccaa 98
            |||||||| ||||||| | |||||||||||||||
Sbjct: 4545 tggtgggacaacaggagaaataagaagaacccaa 4578
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>emb|AL034422.24|HS1141E15 Human DNA sequence from clone RP5-1141E15 on chromosome 20q11.23-12
             Contains the 5' end of GHRH gene for growth hormone
             releasing hormone, the MANBAL gene for mannosidase beta A
             lysosomal-like, the 5' end of the SRC gene for v-src avian
             sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog and a
             CpG island, complete sequence
          Length = 113681

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 139   gtgggttgaggggaggaacaa 159
             |||||||||||||||||||||
Sbjct: 12750 gtgggttgaggggaggaacaa 12770
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>dbj|AK153652.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630033O06 product:unclassifiable, full
            insert sequence
          Length = 1513

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 55   tcctcttgactggtgggataacagg 79
            |||||||||||| ||||||||||||
Sbjct: 1056 tcctcttgactgctgggataacagg 1032
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>gb|AC067971.5|F10K1 Sequence of BAC F10K1 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 111464

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 76    caggaaagataagaagaaccc 96
             |||||||||||||||||||||
Sbjct: 29936 caggaaagataagaagaaccc 29956
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>emb|AL671993.7| Mouse DNA sequence from clone RP23-428E5 on chromosome X, complete
              sequence
          Length = 194106

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 55     tcctcttgactggtgggataacagg 79
              |||||||||||| ||||||||||||
Sbjct: 112794 tcctcttgactgctgggataacagg 112818
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>gb|AC153076.3| Aotus nancymaae clone CH258-449A9, complete sequence
          Length = 184072

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     aacaggaaagataagaagaa 93
              ||||||||||||||||||||
Sbjct: 112900 aacaggaaagataagaagaa 112919
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>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold
          Length = 1952403

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     aacaggaaagataagaagaa 93
              ||||||||||||||||||||
Sbjct: 205198 aacaggaaagataagaagaa 205217
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>gb|AC148204.4| Callicebus moloch clone LB5-291I14, complete sequence
          Length = 83131

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aacaggaaagataagaagaa 93
             ||||||||||||||||||||
Sbjct: 53295 aacaggaaagataagaagaa 53314
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>gb|AC165273.2| Mus musculus BAC clone RP24-267I1 from chromosome 13, complete sequence
          Length = 190600

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    cagtctcctacatgtatgcc 253
              ||||||||||||||||||||
Sbjct: 114413 cagtctcctacatgtatgcc 114394
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>gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome 12, complete sequence
          Length = 190196

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     gttcaactgaagcactgtggcaag 41
              |||||||||||| |||||||||||
Sbjct: 143634 gttcaactgaaggactgtggcaag 143657
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>gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome 1, complete sequence
          Length = 165927

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    ggagtcaggaagcttctgat 321
              ||||||||||||||||||||
Sbjct: 135453 ggagtcaggaagcttctgat 135472
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>gb|AC124742.4| Mus musculus BAC clone RP23-210N16 from 12, complete sequence
          Length = 208101

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   cagtctcctacatgtatgcc 253
             ||||||||||||||||||||
Sbjct: 89524 cagtctcctacatgtatgcc 89505
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>gb|AC159168.3| Callicebus moloch clone LB5-83N20, complete sequence
          Length = 182435

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     aacaggaaagataagaagaa 93
              ||||||||||||||||||||
Sbjct: 181171 aacaggaaagataagaagaa 181190
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>emb|AL031906.1|HS90O12 Human DNA sequence from clone RP1-90O12 on chromosome 6p24.1-25.1,
             complete sequence
          Length = 99035

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ttcctctcgttcaactgaag 29
             ||||||||||||||||||||
Sbjct: 26936 ttcctctcgttcaactgaag 26955
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>emb|X81995.1|NRCATHB N.rustica mRNA for cathepsin B-like cysteine proteinase
          Length = 1331

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 340  gttccactatcttattatca 359
            ||||||||||||||||||||
Sbjct: 1193 gttccactatcttattatca 1212
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>gb|AC148489.3| Saimiri boliviensis boliviensis clone CH254-475P8, complete sequence
          Length = 183300

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     aacaggaaagataagaagaa 93
              ||||||||||||||||||||
Sbjct: 133425 aacaggaaagataagaagaa 133444
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>gb|AC146740.3| Callithrix jacchus clone CH259-204H2, complete sequence
          Length = 224361

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     aacaggaaagataagaagaa 93
              ||||||||||||||||||||
Sbjct: 205198 aacaggaaagataagaagaa 205217
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>gb|AC093320.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-45n11, complete
              sequence
          Length = 245536

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    caactgggtcgtctcccagc 182
              ||||||||||||||||||||
Sbjct: 211192 caactgggtcgtctcccagc 211173
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>gb|AF231351.1|AF231351 Nicotiana tabacum plastidic glucose 6-phosphate dehydrogenase
           (G6PDHP2) gene, complete cds; nuclear gene for plastid
           product
          Length = 7085

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 467 agtgacaaattatgaacatgacca 490
           ||||||||||||||||||| ||||
Sbjct: 572 agtgacaaattatgaacataacca 595
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>emb|CT030176.18| Mouse DNA sequence from clone RP23-142L17 on chromosome 13, complete
             sequence
          Length = 218075

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   cagtctcctacatgtatgcc 253
             ||||||||||||||||||||
Sbjct: 36612 cagtctcctacatgtatgcc 36593
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>gb|U43145.1|PCU43145 Plasmodium chabaudi repeat organellar protein gene, complete cds
          Length = 9985

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  ttccactatcttattatcat 360
            ||||||||||||||||||||
Sbjct: 6417 ttccactatcttattatcat 6398
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 181     gctggcgatcttggactcga 200
               ||||||||||||||||||||
Sbjct: 2114450 gctggcgatcttggactcga 2114431
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>gb|AC102310.11| Mus musculus chromosome 7, clone RP24-426A19, complete sequence
          Length = 180370

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    ataacaggaaagataagaag 91
             ||||||||||||||||||||
Sbjct: 93630 ataacaggaaagataagaag 93649
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>gb|AC160530.8| Mus musculus chromosome 1, clone RP24-225F15, complete sequence
          Length = 170817

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  caactgggtcgtctcccagc 182
            ||||||||||||||||||||
Sbjct: 7932 caactgggtcgtctcccagc 7913
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>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     aacaggaaagataagaagaa 93
              ||||||||||||||||||||
Sbjct: 181195 aacaggaaagataagaagaa 181214
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>emb|AL831772.3| Mouse DNA sequence from clone RP23-320K18 on chromosome 4, complete
            sequence
          Length = 15160

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 56   cctcttgactggtgggataacagg 79
            |||||||||||||||||| |||||
Sbjct: 1371 cctcttgactggtgggattacagg 1348
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>emb|AL671671.5| Mouse DNA sequence from clone RP23-419D6 on chromosome 4, complete
              sequence
          Length = 102298

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 56     cctcttgactggtgggataacagg 79
              |||||||||||||||||| |||||
Sbjct: 101669 cctcttgactggtgggattacagg 101646


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,927,896
Number of Sequences: 3902068
Number of extensions: 3927896
Number of successful extensions: 68027
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67903
Number of HSP's gapped (non-prelim): 112
length of query: 545
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 522
effective length of database: 17,143,297,704
effective search space: 8948801401488
effective search space used: 8948801401488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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