ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags25n05 |
|---|---|
| Clone Library Name | barley_pub |
>P2_ARATH (Q39173) Probable NADP-dependent oxidoreductase P2 (EC 1.3.1.74)| Length = 343 Score = 94.0 bits (232), Expect = 1e-19 Identities = 45/74 (60%), Positives = 56/74 (75%) Frame = +2 Query: 26 NLVYLVSKRIRMQGFVEPDHKHLYPEYRAWVLPHIKDGKVVYVEDVVEGLEAAPGALIGL 205 NL ++ KRIR+QGFV D YP++ VLP IK+GK+ YVEDV +GLE AP AL+GL Sbjct: 268 NLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDVADGLEKAPEALVGL 327 Query: 206 FHGRNVGKQVVKLA 247 FHG+NVGKQVV +A Sbjct: 328 FHGKNVGKQVVVIA 341
>P1_ARATH (Q39172) Probable NADP-dependent oxidoreductase P1 (EC 1.3.1.74)| Length = 345 Score = 93.6 bits (231), Expect = 2e-19 Identities = 44/74 (59%), Positives = 57/74 (77%) Frame = +2 Query: 26 NLVYLVSKRIRMQGFVEPDHKHLYPEYRAWVLPHIKDGKVVYVEDVVEGLEAAPGALIGL 205 NL ++ KRIR+QGFV D Y ++ +VLPHI++GK+ YVEDV +GLE AP AL+GL Sbjct: 270 NLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGL 329 Query: 206 FHGRNVGKQVVKLA 247 FHG+NVGKQVV +A Sbjct: 330 FHGKNVGKQVVVVA 343
>YNCB_ECOLI (P76113) Putative NADP-dependent oxidoreductase yncB (EC 1.-.-.-)| Length = 353 Score = 57.8 bits (138), Expect = 1e-08 Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Frame = +2 Query: 38 LVSKRIRMQGFV-EPDHKHLYPEYRAWVLPHIKDGKVVYVEDVVEGLEAAPGALIGLFHG 214 ++ KRIR+QGF+ D+ H E++ + +K+ K+ Y E++ +GLE AP IGL G Sbjct: 280 VLKKRIRLQGFIIAQDYGHRIHEFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKG 339 Query: 215 RNVGKQVVKLA 247 +N GK V+++A Sbjct: 340 KNFGKVVIRVA 350
>LTB4D_RAT (P97584) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (Dithiolethione-inducible gene 1 protein) (D3T-inducible gene 1 protein) (DIG-1) Length = 329 Score = 42.4 bits (98), Expect = 5e-04 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Frame = +2 Query: 38 LVSKRIRMQGFV------EPDHKHLYPEYRAWVLPHIKDGKVVYVEDVVEGLEAAPGALI 199 ++ +++RM+GF+ E K L + WV +GK+ Y E + EG E P A + Sbjct: 260 IIYQQLRMEGFIVTRWQGEVRQKAL-TDLMNWV----SEGKIRYHEYITEGFEKMPAAFM 314 Query: 200 GLFHGRNVGKQVVK 241 G+ G N+GK +VK Sbjct: 315 GMLKGDNLGKTIVK 328
>LTB4D_PIG (Q29073) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 42.0 bits (97), Expect = 7e-04 Identities = 17/42 (40%), Positives = 26/42 (61%) Frame = +2 Query: 116 VLPHIKDGKVVYVEDVVEGLEAAPGALIGLFHGRNVGKQVVK 241 +L + +GK+ Y E + EG E P A +G+ G N+GK +VK Sbjct: 287 LLKWVSEGKIQYHEHITEGFENMPAAFMGMLKGENLGKAIVK 328
>LTB4D_HUMAN (Q14914) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 42.0 bits (97), Expect = 7e-04 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 5/73 (6%) Frame = +2 Query: 38 LVSKRIRMQGFVE-----PDHKHLYPEYRAWVLPHIKDGKVVYVEDVVEGLEAAPGALIG 202 ++ + +RM+ FV + + WVL +GK+ Y E ++EG E P A +G Sbjct: 260 VIYQELRMEAFVVYRWQGDARQKALKDLLKWVL----EGKIQYKEYIIEGFENMPAAFMG 315 Query: 203 LFHGRNVGKQVVK 241 + G N+GK +VK Sbjct: 316 MLKGDNLGKTIVK 328
>LTB4D_MOUSE (Q91YR9) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 41.6 bits (96), Expect = 9e-04 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Frame = +2 Query: 38 LVSKRIRMQGFV------EPDHKHLYPEYRAWVLPHIKDGKVVYVEDVVEGLEAAPGALI 199 ++ +++RM+GF+ E K L E WV +GKV E V EG E P A + Sbjct: 260 VIYQQLRMEGFIVNRWQGEVRQKAL-TELMNWV----SEGKVQCHEYVTEGFEKMPAAFM 314 Query: 200 GLFHGRNVGKQVVK 241 G+ G N+GK +VK Sbjct: 315 GMLKGENLGKTIVK 328
>LTB4D_RABIT (Q28719) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (ADRAB-F) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 349 Score = 41.2 bits (95), Expect = 0.001 Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 6/67 (8%) Frame = +2 Query: 47 KRIRMQGFV------EPDHKHLYPEYRAWVLPHIKDGKVVYVEDVVEGLEAAPGALIGLF 208 + IRM+GF+ E K L E WVL +GK+ Y E V+EG E P A + + Sbjct: 263 QEIRMEGFIFNRWKGEVGQKAL-KELLTWVL----EGKIQYREFVIEGFENMPAAFMRML 317 Query: 209 HGRNVGK 229 G NVGK Sbjct: 318 KGENVGK 324
>LTB4D_CAVPO (Q9EQZ5) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (LTB4) (12-HD) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (PGR) Length = 329 Score = 40.4 bits (93), Expect = 0.002 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%) Frame = +2 Query: 38 LVSKRIRMQGFV----EPD-HKHLYPEYRAWVLPHIKDGKVVYVEDVVEGLEAAPGALIG 202 ++ K++R++GF+ + D + + WVL +GK+ Y E V +G E P A I Sbjct: 260 IIYKQLRIEGFIVYRWQGDVREKALRDLMKWVL----EGKIQYHEHVTKGFENMPAAFIE 315 Query: 203 LFHGRNVGKQVV 238 + +G N+GK VV Sbjct: 316 MLNGANLGKAVV 327
>QOR_LEIAM (P42865) Probable quinone oxidoreductase (EC 1.6.5.5)| (NADPH:quinone reductase) (P36) Length = 340 Score = 38.1 bits (87), Expect = 0.010 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = +2 Query: 38 LVSKRIRMQGFVEPDHKHLYPEYRAWVLPHIKDGKVVYVED--VVEGLEAAPGALIGLFH 211 L+ K + GF P + P+Y A +L ++K G+V D V GL + A+ L+ Sbjct: 269 LLVKSASLNGFFLPQFHDVIPKYMANLLQYLKAGQVKLFVDKKVFHGLSSVADAVDHLYS 328 Query: 212 GRNVGKQVVKL 244 G N GK +V++ Sbjct: 329 GANYGKVLVEI 339
>YNN4_YEAST (P53912) Hypothetical 41.2 kDa protein in FPR1-TOM22 intergenic| region Length = 376 Score = 33.1 bits (74), Expect = 0.31 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = +2 Query: 74 EPDHKHLYPEYRAWVLPHIKDGKVVYVEDVV--EGLEAAPGALIGLFHGRNVGKQVV 238 +P++K ++ ++ P I DG++ ++ V GL+ P L + HGRN G+++V Sbjct: 316 DPEYKEAAIKFIKFINPKINDGEIHHIPVKVYKNGLDDIPQLLDDIKHGRNSGEKLV 372
>ZADH1_PONPY (Q5R806) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 32.3 bits (72), Expect = 0.52 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +2 Query: 131 KDGKVVYVEDVVEGLEAAPGALIGLFHGRNVGKQVV 238 K+GK+ E V+ GLE A + G N+GKQ+V Sbjct: 308 KEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIV 343
>ZADH1_HUMAN (Q8N8N7) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 32.3 bits (72), Expect = 0.52 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +2 Query: 131 KDGKVVYVEDVVEGLEAAPGALIGLFHGRNVGKQVV 238 K+GK+ E V+ GLE A + G N+GKQ+V Sbjct: 308 KEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIV 343
>ZADH1_MOUSE (Q8VDQ1) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +2 Query: 131 KDGKVVYVEDVVEGLEAAPGALIGLFHGRNVGKQVV 238 K+GK+ E V +GLE A + G NVGKQ+V Sbjct: 308 KEGKLKVKETVAKGLENMGVAFQSMMTGGNVGKQIV 343
>SYGB_XANCP (Q8P3I5) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 698 Score = 30.0 bits (66), Expect = 2.6 Identities = 21/82 (25%), Positives = 32/82 (39%) Frame = +2 Query: 38 LVSKRIRMQGFVEPDHKHLYPEYRAWVLPHIKDGKVVYVEDVVEGLEAAPGALIGLFHGR 217 L + I + V D + Y + P D K + ED+ +GLEA L + + Sbjct: 299 LTEQFIGIANIVSKDVAEVAKGYERVIRPRFADAKFFFDEDLKQGLEAMGAGLASVTYQA 358 Query: 218 NVGKQVVKLANPQ*LTHRIRMQ 283 +G K+A L I Q Sbjct: 359 KLGTVADKVARVAALAEAIAPQ 380
>KGUA_THEMA (Q9X215) Guanylate kinase (EC 2.7.4.8) (GMP kinase)| Length = 207 Score = 29.3 bits (64), Expect = 4.4 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +2 Query: 47 KRIRMQGFVE--PDHKHLYPEYRAWVLPHIKDGKVVYVEDVVEG 172 KR+ F+E H HLY R++V HI +GK V ++ V+G Sbjct: 61 KRVERGEFLEWARVHGHLYGTLRSFVESHINEGKDVVLDIDVQG 104
>PURA_CARHZ (Q3A8S5) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.3 bits (64), Expect = 4.4 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Frame = +2 Query: 14 LNARNLVYLVSKRIRMQGFVEPDHKHLYPEYRAWVLPHIKDGKVVYVEDVVEG-----LE 178 LN + L+ K ++GF + H Y EY + P+ D + + D +E E Sbjct: 162 LNLKEKNNLLEKIYGVEGFSYDELYHEYLEYAEIIRPYATDTSRL-INDAIESGQKVLFE 220 Query: 179 AAPGALIGLFHG 214 A G L+ L HG Sbjct: 221 GAQGTLLDLDHG 232
>MKL2_MOUSE (P59759) MKL/myocardin-like protein 2 (Myocardin-related| transcription factor B) (MRTF-B) Length = 1080 Score = 28.5 bits (62), Expect = 7.6 Identities = 23/97 (23%), Positives = 31/97 (31%) Frame = +1 Query: 7 GGAQRAQPGVPRLQADPHAGVRRAGPQAPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186 G Q P R+QA PH P A LP Sbjct: 726 GSLQLQTPAQGRVQAQPHVAAATQVPAAALPSALTSALPQKQEAFPQHVLGQPQPVRKVF 785 Query: 187 XSAHRTLPRTQRRQAGCQARQPSVTHTSHPHAVSLTS 297 ++ +RQ G +QP V+ TS+P S T+ Sbjct: 786 TNSAPNTVLQYQRQPGPTNQQPFVSKTSNPALQSRTA 822
>CUEO_YERPE (Q8ZBK0) Blue copper oxidase cueO precursor (Copper efflux oxidase)| Length = 533 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +1 Query: 220 RRQAGCQARQPSVTHTSHPHAVSLTSHQI 306 +RQ QP+ T HPH S T HQ+ Sbjct: 125 KRQVTFAVEQPAATCWFHPHTHSKTGHQV 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,885,573 Number of Sequences: 219361 Number of extensions: 839171 Number of successful extensions: 2883 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2827 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2882 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
