ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags25n05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY110553.1| Zea mays CL22344_1 mRNA sequence 107 3e-20
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
3dbj|AK104386.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
4dbj|AK060453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
6emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb... 58 3e-05
7ref|XM_473036.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
9dbj|AK109382.2| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
10dbj|AK069136.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
11emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
12dbj|AK071631.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.024
14dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.024
15dbj|AK063075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.024
16gb|AC163894.2| Glomus intraradices clone JGIATSX-9F17, complete ... 44 0.38
17gb|AY112429.1| Zea mays CL31479_3 mRNA sequence 44 0.38
18gb|AY422746.1| Aeromonas hydrophila clone F81 putative replicati... 42 1.5
19gb|AC106717.7| Homo sapiens 3 BAC RP11-400F23 (Roswell Park Canc... 42 1.5
20ref|XM_631315.1| Dictyostelium discoideum hypothetical protein (... 40 5.9
21ref|XM_509410.1| PREDICTED: Pan troglodytes similar to kinase su... 40 5.9
22gb|BC107106.1| Homo sapiens kinase suppressor of ras 2, mRNA (cD... 40 5.9
23gb|BC107107.1| Homo sapiens kinase suppressor of ras 2, mRNA (cD... 40 5.9
24gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 40 5.9
25gb|AC134839.3| Mus musculus BAC clone RP24-362O23 from chromosom... 40 5.9
26gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome... 40 5.9
27ref|XM_992480.1| PREDICTED: Mus musculus kinase suppressor of ra... 40 5.9
28gb|AY345972.1| Homo sapiens kinase suppressor of Ras-2 (KSR2) mR... 40 5.9
29gb|AC116471.8| Mus musculus chromosome 12, clone RP23-384N3, com... 40 5.9
30gb|BC068233.1| Mus musculus cDNA clone IMAGE:30362574, **** WARN... 40 5.9
31emb|AL358938.8| Human DNA sequence from clone RP11-459F3 on chro... 40 5.9
32gb|AC079127.28| Homo sapiens 12 BAC RP11-143P3 (Roswell Park Can... 40 5.9
33gb|AC153658.4| Mus musculus BAC clone RP23-272J19 from chromosom... 40 5.9
34gb|AC113303.16| Mus musculus chromosome 5, clone RP23-431E5, com... 40 5.9
35ref|XM_222212.3| PREDICTED: Rattus norvegicus similar to kinase ... 40 5.9
36dbj|AK098831.1| Homo sapiens cDNA FLJ25965 fis, clone TST04647 40 5.9
37gb|AF094684.1|MM2SOS5 Mus musculus Sos2 gene, exon 10a 40 5.9
38gb|AC133949.4| Mus musculus BAC clone RP24-242E1 from 12, comple... 40 5.9
39ref|NM_173598.2| Homo sapiens kinase suppressor of ras 2 (KSR2),... 40 5.9 
>gb|AY110553.1| Zea mays CL22344_1 mRNA sequence
          Length = 656

 Score =  107 bits (54), Expect = 3e-20
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                       
Query: 42  tctccaagcggatccgcatgcaggggttcgtcgagccggaccacaagcacctctacccgg 101
           ||||||||||  ||||| ||||||||||| ||||||| ||||||||||||||||||||| 
Sbjct: 336 tctccaagcgcctccgcctgcaggggttcatcgagcccgaccacaagcacctctacccgc 277

                                         
Query: 102 agtacagggcgtgggtgctgccgcacatca 131
           |||||  |||||||||||||||| ||||||
Sbjct: 276 agtacgaggcgtgggtgctgccgtacatca 247



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 191 gcgctcatcggactcttccacggacgcaacgtcggcaagcag 232
           |||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 187 gcgctcataggactcttccacggtcgcaacgtcggaaagcag 146
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                    
Query: 131     aaggacgggaaggtggtgtacgtggaggacgtcgtggagggactcgaggcggc 183
               ||||| ||||||||||  ||||||||||||||||| ||||| ||||| |||||
Sbjct: 6917193 aaggaagggaaggtggcatacgtggaggacgtcgttgaggggctcgatgcggc 6917245



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                           
Query: 140     aaggtggtgtacgtggaggacgtcgtggagggactcgaggcggcgcccggagcgctcatc 199
               ||||||||||| ||||||||| |||| ||||| ||||||||||| || | ||| ||||| 
Sbjct: 6870978 aaggtggtgtatgtggaggacatcgttgaggggctcgaggcggcaccggcagctctcatt 6871037

                                                
Query: 200     ggactcttccacggacgcaacgtcggcaagcag 232
               || || |||   || ||||| ||||||||||||
Sbjct: 6871038 gggctattcactggccgcaatgtcggcaagcag 6871070
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>dbj|AK104386.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-E06, full
            insert sequence
          Length = 1268

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 131  aaggacgggaaggtggtgtacgtggaggacgtcgtggagggactcgaggcggc 183
            ||||| ||||||||||  ||||||||||||||||| ||||| ||||| |||||
Sbjct: 1005 aaggaagggaaggtggcatacgtggaggacgtcgttgaggggctcgatgcggc 1057
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>dbj|AK060453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G06, full
            insert sequence
          Length = 1335

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 131  aaggacgggaaggtggtgtacgtggaggacgtcgtggagggactcgaggcggc 183
            ||||| ||||||||||  ||||||||||||||||| ||||| ||||| |||||
Sbjct: 1007 aaggaagggaaggtggcatacgtggaggacgtcgttgaggggctcgatgcggc 1059
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                    
Query: 131     aaggacgggaaggtggtgtacgtggaggacgtcgtggagggactcgaggcggc 183
               ||||| ||||||||||  ||||||||||||||||| ||||| ||||| |||||
Sbjct: 6917072 aaggaagggaaggtggcatacgtggaggacgtcgttgaggggctcgatgcggc 6917124



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                           
Query: 140     aaggtggtgtacgtggaggacgtcgtggagggactcgaggcggcgcccggagcgctcatc 199
               ||||||||||| ||||||||| |||| ||||| ||||||||||| || | ||| ||||| 
Sbjct: 6870857 aaggtggtgtatgtggaggacatcgttgaggggctcgaggcggcaccggcagctctcatt 6870916

                                                
Query: 200     ggactcttccacggacgcaacgtcggcaagcag 232
               || || |||   || ||||| ||||||||||||
Sbjct: 6870917 gggctattcactggccgcaatgtcggcaagcag 6870949
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>emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb0001P19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144563

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                         
Query: 140   aaggtggtgtacgtggaggacgtcgtggagggactcgaggcggcgcccggagcgctcatc 199
             ||||||||||| ||||||||| |||| ||||| ||||||||||| || | ||| ||||| 
Sbjct: 91060 aaggtggtgtatgtggaggacatcgttgaggggctcgaggcggcaccggcagctctcatt 91001

                                              
Query: 200   ggactcttccacggacgcaacgtcggcaagcag 232
             || || |||   || ||||| ||||||||||||
Sbjct: 91000 gggctattcactggccgcaatgtcggcaagcag 90968



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 131   aaggacgggaaggtggtgtacgtggaggacgtcgtggagggactcgaggcggc 183
             ||||| ||||||||||  ||||||||||||||||| ||||| ||||| |||||
Sbjct: 44845 aaggaagggaaggtggcatacgtggaggacgtcgttgaggggctcgatgcggc 44793
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>ref|XM_473036.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1038

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 191  gcgctcatcggactcttccacggacgcaacgtcggcaagcaggt 234
            ||||||||||| ||||||  ||| ||||||||||||||||||||
Sbjct: 973  gcgctcatcgggctcttctccggccgcaacgtcggcaagcaggt 1016
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 191      gcgctcatcggactcttccacggacgcaacgtcggcaagcaggt 234
                ||||||||||| ||||||  ||| ||||||||||||||||||||
Sbjct: 24833598 gcgctcatcgggctcttctccggccgcaacgtcggcaagcaggt 24833555
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>dbj|AK109382.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-F02, full
            insert sequence
          Length = 1343

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 191  gcgctcatcggactcttccacggacgcaacgtcggcaagcaggt 234
            ||||||||||| ||||||  ||| ||||||||||||||||||||
Sbjct: 1081 gcgctcatcgggctcttctccggccgcaacgtcggcaagcaggt 1124
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>dbj|AK069136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008C06, full
            insert sequence
          Length = 1269

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 191  gcgctcatcggactcttccacggacgcaacgtcggcaagcaggt 234
            ||||||||||| ||||||  ||| ||||||||||||||||||||
Sbjct: 1019 gcgctcatcgggctcttctccggccgcaacgtcggcaagcaggt 1062
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
             complete sequence
          Length = 170765

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 191   gcgctcatcggactcttccacggacgcaacgtcggcaagcaggt 234
             ||||||||||| ||||||  ||| ||||||||||||||||||||
Sbjct: 95314 gcgctcatcgggctcttctccggccgcaacgtcggcaagcaggt 95271
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>dbj|AK071631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105O06, full
            insert sequence
          Length = 1270

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 131  aaggacgggaaggtggtgtacgtggaggacgtcgtggaggg 171
            ||||| ||||||||||  ||||||||||||||||| |||||
Sbjct: 1010 aaggaagggaaggtggcatacgtggaggacgtcgttgaggg 1050
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 136      cgggaaggtggtgtacgtggaggacgtcgtgg 167
                ||||||||||| | ||||||||||||||||||
Sbjct: 29811649 cgggaaggtggggcacgtggaggacgtcgtgg 29811680
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>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2056_H01
          Length = 123428

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 136   cgggaaggtggtgtacgtggaggacgtcgtgg 167
             ||||||||||| | ||||||||||||||||||
Sbjct: 67994 cgggaaggtggggcacgtggaggacgtcgtgg 68025
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>dbj|AK063075.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H08, full
           insert sequence
          Length = 667

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 136 cgggaaggtggtgtacgtggaggacgtcgtgg 167
           ||||||||||| | ||||||||||||||||||
Sbjct: 267 cgggaaggtggggcacgtggaggacgtcgtgg 298
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>gb|AC163894.2| Glomus intraradices clone JGIATSX-9F17, complete sequence
          Length = 37905

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 116   gtgctgccgcacatcaaggacgggaaggtg 145
             ||||||||||||||||||| ||| ||||||
Sbjct: 31762 gtgctgccgcacatcaaggccggcaaggtg 31791
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>gb|AY112429.1| Zea mays CL31479_3 mRNA sequence
          Length = 587

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 126 acatcaaggacgggaaggtggtgtacgtggagga 159
           |||||||||| ||||||||||||  |||||||||
Sbjct: 252 acatcaaggaggggaaggtggtggtcgtggagga 219
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>gb|AY422746.1| Aeromonas hydrophila clone F81 putative replication protein C gene,
           complete cds
          Length = 1032

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 398 attcacgtgttttgaattatt 418
           |||||||||||||||||||||
Sbjct: 24  attcacgtgttttgaattatt 44
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>gb|AC106717.7| Homo sapiens 3 BAC RP11-400F23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 27934

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 405   tgttttgaattatttgtttct 425
             |||||||||||||||||||||
Sbjct: 12148 tgttttgaattatttgtttct 12128
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>ref|XM_631315.1| Dictyostelium discoideum hypothetical protein (DDB0216059), partial
            mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  ttttgaattatttgtttctt 426
            ||||||||||||||||||||
Sbjct: 3426 ttttgaattatttgtttctt 3445
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>ref|XM_509410.1| PREDICTED: Pan troglodytes similar to kinase suppressor of Ras-2
           (LOC452288), mRNA
          Length = 1274

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 cgtggaggacgtcgtggagg 170
           ||||||||||||||||||||
Sbjct: 924 cgtggaggacgtcgtggagg 905
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>gb|BC107106.1| Homo sapiens kinase suppressor of ras 2, mRNA (cDNA clone
            IMAGE:40019270), partial cds
          Length = 2486

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  cgtggaggacgtcgtggagg 170
            ||||||||||||||||||||
Sbjct: 1216 cgtggaggacgtcgtggagg 1197
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>gb|BC107107.1| Homo sapiens kinase suppressor of ras 2, mRNA (cDNA clone
            IMAGE:40019271), partial cds
          Length = 2486

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  cgtggaggacgtcgtggagg 170
            ||||||||||||||||||||
Sbjct: 1216 cgtggaggacgtcgtggagg 1197
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>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 222   tcggcaagcaggttgtcaagctcg 245
             |||||||||||| |||||||||||
Sbjct: 34154 tcggcaagcaggatgtcaagctcg 34177
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>gb|AC134839.3| Mus musculus BAC clone RP24-362O23 from chromosome 19, complete
            sequence
          Length = 178560

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  agtgtccttgacaagtcacc 301
            ||||||||||||||||||||
Sbjct: 1834 agtgtccttgacaagtcacc 1815
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>gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome 19, complete sequence
          Length = 208557

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    agtgtccttgacaagtcacc 301
              ||||||||||||||||||||
Sbjct: 169922 agtgtccttgacaagtcacc 169903
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>ref|XM_992480.1| PREDICTED: Mus musculus kinase suppressor of ras 2 (Ksr2), mRNA
          Length = 2997

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  cgtggaggacgtcgtggagg 170
            ||||||||||||||||||||
Sbjct: 1614 cgtggaggacgtcgtggagg 1595
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>gb|AY345972.1| Homo sapiens kinase suppressor of Ras-2 (KSR2) mRNA, complete cds
          Length = 2490

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  cgtggaggacgtcgtggagg 170
            ||||||||||||||||||||
Sbjct: 1221 cgtggaggacgtcgtggagg 1202
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>gb|AC116471.8| Mus musculus chromosome 12, clone RP23-384N3, complete sequence
          Length = 240876

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    tttgaattatttgtttcttc 427
              ||||||||||||||||||||
Sbjct: 140612 tttgaattatttgtttcttc 140593
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>gb|BC068233.1| Mus musculus cDNA clone IMAGE:30362574, **** WARNING: chimeric clone
            ****
          Length = 4587

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  cgtggaggacgtcgtggagg 170
            ||||||||||||||||||||
Sbjct: 1199 cgtggaggacgtcgtggagg 1180
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>emb|AL358938.8| Human DNA sequence from clone RP11-459F3 on chromosome 10 Contains four
             novel genes, the SFRP5 gene for secreted frizzled-related
             protein 5, the 3' end of the CRTAC1 gene for cartilage
             acidic protein 1 and four CpG islands, complete sequence
          Length = 146124

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 279   tgcagtgtccttgacaagtcacca 302
             ||||||| ||||||||||||||||
Sbjct: 75726 tgcagtgaccttgacaagtcacca 75703
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>gb|AC079127.28| Homo sapiens 12 BAC RP11-143P3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 138000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    cgtggaggacgtcgtggagg 170
              ||||||||||||||||||||
Sbjct: 115506 cgtggaggacgtcgtggagg 115487
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>gb|AC153658.4| Mus musculus BAC clone RP23-272J19 from chromosome 12, complete
             sequence
          Length = 202978

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 404   gtgttttgaattatttgtttcttc 427
             ||||||||||| ||||||||||||
Sbjct: 50565 gtgttttgaataatttgtttcttc 50588
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>gb|AC113303.16| Mus musculus chromosome 5, clone RP23-431E5, complete sequence
          Length = 221109

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   cgtggaggacgtcgtggagg 170
             ||||||||||||||||||||
Sbjct: 48397 cgtggaggacgtcgtggagg 48416
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>ref|XM_222212.3| PREDICTED: Rattus norvegicus similar to kinase suppressor of ras 2
            (LOC288691), mRNA
          Length = 8175

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  cgtggaggacgtcgtggagg 170
            ||||||||||||||||||||
Sbjct: 4320 cgtggaggacgtcgtggagg 4301
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>dbj|AK098831.1| Homo sapiens cDNA FLJ25965 fis, clone TST04647
          Length = 1512

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 cgtggaggacgtcgtggagg 170
           ||||||||||||||||||||
Sbjct: 730 cgtggaggacgtcgtggagg 711
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>gb|AF094684.1|MM2SOS5 Mus musculus Sos2 gene, exon 10a
          Length = 909

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 404 gtgttttgaattatttgtttcttc 427
           ||||||||||| ||||||||||||
Sbjct: 388 gtgttttgaataatttgtttcttc 411
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>gb|AC133949.4| Mus musculus BAC clone RP24-242E1 from 12, complete sequence
          Length = 143042

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 404   gtgttttgaattatttgtttcttc 427
             ||||||||||| ||||||||||||
Sbjct: 74502 gtgttttgaataatttgtttcttc 74525
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>ref|NM_173598.2| Homo sapiens kinase suppressor of ras 2 (KSR2), mRNA
          Length = 2490

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  cgtggaggacgtcgtggagg 170
            ||||||||||||||||||||
Sbjct: 1221 cgtggaggacgtcgtggagg 1202


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,597,318
Number of Sequences: 3902068
Number of extensions: 2597318
Number of successful extensions: 53707
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53564
Number of HSP's gapped (non-prelim): 140
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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