ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25n03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009584.1| Triticum aestivum clone wre1n.pk0044.b2:fis, full insert mRNA sequence Length = 876 Score = 777 bits (392), Expect = 0.0 Identities = 422/432 (97%) Strand = Plus / Plus Query: 190 attcaaagtaatgagcgtggaattgctgctcgtgacagtggtgcttttgcatgggagatt 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 attcaaagtaatgagcgtggaattgctgctcgtgacagtggtgcttttgcatgggagatt 67 Query: 250 gttccgattgaagttcctgttggtagagggaaacctgcagtacttgttgacaaagatgag 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gttccgattgaagttcctgttggtagagggaaacctgcagtacttgttgacaaagatgag 127 Query: 310 agtctagacaagtttgacgcagccaagctgaagaagttacgaccagcattcaaggaaaat 369 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 128 agcctagacaagtttgacgcagccaagctgaagaagttacgaccagcattcaaggagaat 187 Query: 370 gctggtactgttactgctggaaatgcttctagtataagtgatggcgctgcagcattagta 429 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 188 gctggtactgttactgctggaaatgcttctagtataagtgatggtgctgcagcattagta 247 Query: 430 ttggtgagtgggaagaaggctcaagaacttggattgcaagtccttgcaaggatcaaggga 489 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 248 ttggtgagtgggaagaaggctcaagaacttggattgcaagtccttgcaaggattaaggga 307 Query: 490 tttgctgacgcagcccaagctcctgaactatttaccactaccccagcacttgccataccg 549 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 tttgccgatgcagcccaagctcctgaactatttaccactaccccagcacttgccataccg 367 Query: 550 aaggctctcacgaatgctggcctagagtcctctcgtgttgatttttatgaaattaatgaa 609 ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 368 aaggctctcacaaatgctggcctagagtcctctcgtattgatttttatgaaatcaatgaa 427 Query: 610 gcattttcggct 621 || ||||||||| Sbjct: 428 gccttttcggct 439
>ref|XM_450298.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1689 Score = 674 bits (340), Expect = 0.0 Identities = 541/608 (88%) Strand = Plus / Plus Query: 10 aatgctccgaaatacatcgctgaagccagaaaaggatctcgttttggacatgacagcctc 69 |||||||| |||||||| |||||||| |||||||||||||||||||||||||||| || Sbjct: 517 aatgctccaaaatacattgctgaagctagaaaaggatctcgttttggacatgacactctt 576 Query: 70 gttgatggcatgcttaaggatggcctttgggatgtatacggtgattgtgccatgggagtg 129 ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 577 gttgatggcatgcttaaagatggcctttgggatgtatacggtgattttgccatgggaaat 636 Query: 130 tgcgctgagctttgtgctgacaatcatgccctgacgagagaagaccaggatgcatatgct 189 || |||||||||||||||||||||||||| ||||| || |||||||||||||| |||||| Sbjct: 637 tgtgctgagctttgtgctgacaatcatgctctgacaagggaagaccaggatgcctatgct 696 Query: 190 attcaaagtaatgagcgtggaattgctgctcgtgacagtggtgcttttgcatgggagatt 249 |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 697 attcaaagcaatgagcgtggaattgctgctcggaacagtggtgcttttgcatgggagatt 756 Query: 250 gttccgattgaagttcctgttggtagagggaaacctgcagtacttgttgacaaagatgag 309 ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 757 gttccgattgaagttcctgttgggagagggaaaccaccggtacttgttgacaaagatgag 816 Query: 310 agtctagacaagtttgacgcagccaagctgaagaagttacgaccagcattcaaggaaaat 369 | || |||||||||||| ||| || ||||||||| | || || |||||||| ||| Sbjct: 817 ggcctggacaagtttgacccagtgaaactgaagaagctccgtcctagtttcaaggagaat 876 Query: 370 gctggtactgttactgctggaaatgcttctagtataagtgatggcgctgcagcattagta 429 | |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||||| Sbjct: 877 ggtggtactgttactgctgggaatgcttctagtataagtgacggtgctgccgcattagta 936 Query: 430 ttggtgagtgggaagaaggctcaagaacttggattgcaagtccttgcaaggatcaaggga 489 |||||||||||| ||||||| |||||||||||| ||||||| ||||| | ||||| ||| Sbjct: 937 ttggtgagtgggcagaaggcacaagaacttggactgcaagttattgcacgaatcaaagga 996 Query: 490 tttgctgacgcagcccaagctcctgaactatttaccactaccccagcacttgccataccg 549 ||||| || ||||| |||||||||||| |||||||||||| ||| |||||||||||||| Sbjct: 997 tttgcagatgcagctcaagctcctgaattatttaccactagcccggcacttgccatacct 1056 Query: 550 aaggctctcacgaatgctggcctagagtcctctcgtgttgatttttatgaaattaatgaa 609 |||||||| | ||||||||| | ||||| ||||||||||||| ||||||||||||||| Sbjct: 1057 aaggctcttgctaatgctggcttggagtcttctcgtgttgattactatgaaattaatgaa 1116 Query: 610 gcattttc 617 || ||||| Sbjct: 1117 gccttttc 1124
>dbj|AK102536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096I21, full insert sequence Length = 1689 Score = 674 bits (340), Expect = 0.0 Identities = 541/608 (88%) Strand = Plus / Plus Query: 10 aatgctccgaaatacatcgctgaagccagaaaaggatctcgttttggacatgacagcctc 69 |||||||| |||||||| |||||||| |||||||||||||||||||||||||||| || Sbjct: 517 aatgctccaaaatacattgctgaagctagaaaaggatctcgttttggacatgacactctt 576 Query: 70 gttgatggcatgcttaaggatggcctttgggatgtatacggtgattgtgccatgggagtg 129 ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 577 gttgatggcatgcttaaagatggcctttgggatgtatacggtgattttgccatgggaaat 636 Query: 130 tgcgctgagctttgtgctgacaatcatgccctgacgagagaagaccaggatgcatatgct 189 || |||||||||||||||||||||||||| ||||| || |||||||||||||| |||||| Sbjct: 637 tgtgctgagctttgtgctgacaatcatgctctgacaagggaagaccaggatgcctatgct 696 Query: 190 attcaaagtaatgagcgtggaattgctgctcgtgacagtggtgcttttgcatgggagatt 249 |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 697 attcaaagcaatgagcgtggaattgctgctcggaacagtggtgcttttgcatgggagatt 756 Query: 250 gttccgattgaagttcctgttggtagagggaaacctgcagtacttgttgacaaagatgag 309 ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 757 gttccgattgaagttcctgttgggagagggaaaccaccggtacttgttgacaaagatgag 816 Query: 310 agtctagacaagtttgacgcagccaagctgaagaagttacgaccagcattcaaggaaaat 369 | || |||||||||||| ||| || ||||||||| | || || |||||||| ||| Sbjct: 817 ggcctggacaagtttgacccagtgaaactgaagaagctccgtcctagtttcaaggagaat 876 Query: 370 gctggtactgttactgctggaaatgcttctagtataagtgatggcgctgcagcattagta 429 | |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||||| Sbjct: 877 ggtggtactgttactgctgggaatgcttctagtataagtgacggtgctgccgcattagta 936 Query: 430 ttggtgagtgggaagaaggctcaagaacttggattgcaagtccttgcaaggatcaaggga 489 |||||||||||| ||||||| |||||||||||| ||||||| ||||| | ||||| ||| Sbjct: 937 ttggtgagtgggcagaaggcacaagaacttggactgcaagttattgcacgaatcaaagga 996 Query: 490 tttgctgacgcagcccaagctcctgaactatttaccactaccccagcacttgccataccg 549 ||||| || ||||| |||||||||||| |||||||||||| ||| |||||||||||||| Sbjct: 997 tttgcagatgcagctcaagctcctgaattatttaccactagcccggcacttgccatacct 1056 Query: 550 aaggctctcacgaatgctggcctagagtcctctcgtgttgatttttatgaaattaatgaa 609 |||||||| | ||||||||| | ||||| ||||||||||||| ||||||||||||||| Sbjct: 1057 aaggctcttgctaatgctggcttggagtcttctcgtgttgattactatgaaattaatgaa 1116 Query: 610 gcattttc 617 || ||||| Sbjct: 1117 gccttttc 1124
>dbj|AK059654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C10, full insert sequence Length = 1609 Score = 674 bits (340), Expect = 0.0 Identities = 541/608 (88%) Strand = Plus / Plus Query: 10 aatgctccgaaatacatcgctgaagccagaaaaggatctcgttttggacatgacagcctc 69 |||||||| |||||||| |||||||| |||||||||||||||||||||||||||| || Sbjct: 343 aatgctccaaaatacattgctgaagctagaaaaggatctcgttttggacatgacactctt 402 Query: 70 gttgatggcatgcttaaggatggcctttgggatgtatacggtgattgtgccatgggagtg 129 ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 403 gttgatggcatgcttaaagatggcctttgggatgtatacggtgattttgccatgggaaat 462 Query: 130 tgcgctgagctttgtgctgacaatcatgccctgacgagagaagaccaggatgcatatgct 189 || |||||||||||||||||||||||||| ||||| || |||||||||||||| |||||| Sbjct: 463 tgtgctgagctttgtgctgacaatcatgctctgacaagggaagaccaggatgcctatgct 522 Query: 190 attcaaagtaatgagcgtggaattgctgctcgtgacagtggtgcttttgcatgggagatt 249 |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 523 attcaaagcaatgagcgtggaattgctgctcggaacagtggtgcttttgcatgggagatt 582 Query: 250 gttccgattgaagttcctgttggtagagggaaacctgcagtacttgttgacaaagatgag 309 ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 583 gttccgattgaagttcctgttgggagagggaaaccaccggtacttgttgacaaagatgag 642 Query: 310 agtctagacaagtttgacgcagccaagctgaagaagttacgaccagcattcaaggaaaat 369 | || |||||||||||| ||| || ||||||||| | || || |||||||| ||| Sbjct: 643 ggcctggacaagtttgacccagtgaaactgaagaagctccgtcctagtttcaaggagaat 702 Query: 370 gctggtactgttactgctggaaatgcttctagtataagtgatggcgctgcagcattagta 429 | |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||||| Sbjct: 703 ggtggtactgttactgctgggaatgcttctagtataagtgacggtgctgccgcattagta 762 Query: 430 ttggtgagtgggaagaaggctcaagaacttggattgcaagtccttgcaaggatcaaggga 489 |||||||||||| ||||||| |||||||||||| ||||||| ||||| | ||||| ||| Sbjct: 763 ttggtgagtgggcagaaggcacaagaacttggactgcaagttattgcacgaatcaaagga 822 Query: 490 tttgctgacgcagcccaagctcctgaactatttaccactaccccagcacttgccataccg 549 ||||| || ||||| |||||||||||| |||||||||||| ||| |||||||||||||| Sbjct: 823 tttgcagatgcagctcaagctcctgaattatttaccactagcccggcacttgccatacct 882 Query: 550 aaggctctcacgaatgctggcctagagtcctctcgtgttgatttttatgaaattaatgaa 609 |||||||| | ||||||||| | ||||| ||||||||||||| ||||||||||||||| Sbjct: 883 aaggctcttgctaatgctggcttggagtcttctcgtgttgattactatgaaattaatgaa 942 Query: 610 gcattttc 617 || ||||| Sbjct: 943 gccttttc 950
>gb|AY103699.1| Zea mays PCO140839 mRNA sequence Length = 1749 Score = 539 bits (272), Expect = e-150 Identities = 515/596 (86%) Strand = Plus / Plus Query: 22 tacatcgctgaagccagaaaaggatctcgttttggacatgacagcctcgttgatggcatg 81 ||||| |||||||| || ||||| ||||||||||||||||||| || ||||||| |||| Sbjct: 597 tacattgctgaagctaggaaagggtctcgttttggacatgacacacttgttgatgccatg 656 Query: 82 cttaaggatggcctttgggatgtatacggtgattgtgccatgggagtgtgcgctgagctt 141 ||||||||||| ||||||||||||||| ||| |||||||||||| |||| || || ||| Sbjct: 657 cttaaggatggactttgggatgtatacaatgactgtgccatgggaatgtgtgccgaactt 716 Query: 142 tgtgctgacaatcatgccctgacgagagaagaccaggatgcatatgctattcaaagtaat 201 |||||||||||||||||||| || ||||||||||||||||| | |||||| ||||| || Sbjct: 717 tgtgctgacaatcatgccctcacaagagaagaccaggatgcttttgctatccaaagcaac 776 Query: 202 gagcgtggaattgctgctcgtgacagtggtgcttttgcatgggagattgttccgattgaa 261 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 cagcgtggaattgctgctcgtgacagtggtgcttttgcatgggagattgttccgattgaa 836 Query: 262 gttcctgttggtagagggaaacctgcagtacttgttgacaaagatgagagtctagacaag 321 ||||||||||| ||||| ||||| | |||||| |||| |||||||| || || || ||| Sbjct: 837 gttcctgttgggagaggaaaaccacctgtacttattgagaaagatgaaagcctggataag 896 Query: 322 tttgacgcagccaagctgaagaagttacgaccagcattcaaggaaaatgctggtactgtt 381 |||||| |||| || |||||||| | || ||| |||||||| |||| |||||| ||| Sbjct: 897 tttgacccagcaaaactgaagaaacttcgcccaagtttcaaggagaatggtggtaccgtt 956 Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 || ||||||||||||||||||||||||||||| || || |||||||| |||||||||||| Sbjct: 957 acagctggaaatgcttctagtataagtgatggggcggctgcattagttttggtgagtggg 1016 Query: 442 aagaaggctcaagaacttggattgcaagtccttgcaaggatcaagggatttgctgacgca 501 ||||||||||||| ||||| ||||||||||||||||||||| |||| ||| || || Sbjct: 1017 cagaaggctcaagagcttggcctgcaagtccttgcaaggatcagaggatatgcagatgcg 1076 Query: 502 gcccaagctcctgaactatttaccactaccccagcacttgccataccgaaggctctcacg 561 || |||||||| ||||| ||||| || |||||||||||||| ||||| |||||| | | Sbjct: 1077 gctcaagctccggaactttttacaaccaccccagcacttgcgataccaaaggctatatca 1136 Query: 562 aatgctggcctagagtcctctcgtgttgatttttatgaaattaatgaagcattttc 617 |||||||| ||||||| || | ||||||||||| ||| ||||||||||||||||| Sbjct: 1137 aatgctggattagagtcatcccatgttgatttttttgagattaatgaagcattttc 1192
>gb|BT018966.1| Zea mays clone Contig360.F mRNA sequence Length = 1615 Score = 323 bits (163), Expect = 4e-85 Identities = 238/263 (90%) Strand = Plus / Plus Query: 22 tacatcgctgaagccagaaaaggatctcgttttggacatgacagcctcgttgatggcatg 81 ||||| |||||||| || || || ||||||||||| ||||||| || ||||||| |||| Sbjct: 523 tacattgctgaagctaggaaggggtctcgttttggtcatgacacacttgttgatgccatg 582 Query: 82 cttaaggatggcctttgggatgtatacggtgattgtgccatgggagtgtgcgctgagctt 141 ||||||||||| ||||||||||||||| |||||||||||||||| |||| || |||||| Sbjct: 583 cttaaggatgggctttgggatgtatacaatgattgtgccatgggaatgtgtgccgagctt 642 Query: 142 tgtgctgacaatcatgccctgacgagagaagaccaggatgcatatgctattcaaagtaat 201 |||||||||||||||||||| || ||||||||||||||||||| |||||| ||||| ||| Sbjct: 643 tgtgctgacaatcatgccctcacaagagaagaccaggatgcatttgctatccaaagcaat 702 Query: 202 gagcgtggaattgctgctcgtgacagtggtgcttttgcatgggagattgttccgattgaa 261 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 703 gagcgtggaattgctgctcgtgacagtggtgcttttgcatgggagattattccggttcaa 762 Query: 262 gttcctgttggtagagggaaacc 284 ||||||||||||||||| ||||| Sbjct: 763 gttcctgttggtagaggaaaacc 785 Score = 206 bits (104), Expect = 6e-50 Identities = 224/264 (84%) Strand = Plus / Plus Query: 358 ttcaaggaaaatgctggtactgttactgctggaaatgcttctagtataagtgatggcgct 417 |||||||| |||| |||||| ||||| |||||||||||||||||||||||||| || ||| Sbjct: 859 ttcaaggagaatgatggtacagttacagctggaaatgcttctagtataagtgagggagct 918 Query: 418 gcagcattagtattggtgagtgggaagaaggctcaagaacttggattgcaagtccttgca 477 || |||||||| ||||||||||| ||||||||||||| |||| | |||||||||||| Sbjct: 919 gctgcattagttttggtgagtggacagaaggctcaagagcttgcccttcaagtccttgca 978 Query: 478 aggatcaagggatttgctgacgcagcccaagctcctgaactatttaccactaccccagca 537 |||||||| || | |||||| ||||| |||||||| || || ||||| || || |||||| Sbjct: 979 aggatcaaaggttatgctgatgcagctcaagctccggagctttttacaaccactccagca 1038 Query: 538 cttgccataccgaaggctctcacgaatgctggcctagagtcctctcgtgttgatttttat 597 ||||| ||||| |||||| || | ||||| || ||||||| || | ||||||||| ||| Sbjct: 1039 cttgcaataccaaaggctatcgcaaatgcgggattagagtcatcccatgttgatttctat 1098 Query: 598 gaaattaatgaagcattttcggct 621 || ||||||||||| ||||||||| Sbjct: 1099 gagattaatgaagccttttcggct 1122
>gb|AF113522.1|AF113522 Zea mays cultivar TX-5855 acetoacetyl CoA thiolase mRNA, partial cds Length = 971 Score = 291 bits (147), Expect = 1e-75 Identities = 324/383 (84%) Strand = Plus / Plus Query: 235 tttgcatgggagattgttccgattgaagttcctgttggtagagggaaacctgcagtactt 294 |||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||||| Sbjct: 14 tttgcatgggagattgttccgattgaagttcctgttgggagaggaaaaccacctgtactc 73 Query: 295 gttgacaaagatgagagtctagacaagtttgacgcagccaagctgaagaagttacgacca 354 |||| |||||||| || || || || |||||| |||| || |||||||| | || ||| Sbjct: 74 attgagaaagatgaaagcctggataactttgacccagcaaaactgaagaaacttcgccca 133 Query: 355 gcattcaaggaaaatgctggtactgttactgctggaaatgcttctagtataagtgatggc 414 |||||||| |||| |||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134 agtttcaaggagaatggtggtaccgttacagctggaaatgcttctagtataagtgatggg 193 Query: 415 gctgcagcattagtattggtgagtgggaagaaggctcaagaacttggattgcaagtcctt 474 || || |||||||| |||||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 194 gcggctgcattagttttggtgagtgggcagaaggctcaagagcttggcctgcaagtcctt 253 Query: 475 gcaaggatcaagggatttgctgacgcagcccaagctcctgaactatttaccactacccca 534 |||||||||| |||| ||| || || || |||||||| ||||| ||||| || |||||| Sbjct: 254 gcaaggatcagaggatatgcagatgcggctcaagctccggaactttttacaaccacccca 313 Query: 535 gcacttgccataccgaaggctctcacgaatgctggcctagagtcctctcgtgttgatttt 594 |||||||| ||||| |||||| | | |||||||| ||||||| || | |||||||||| Sbjct: 314 gcacttgcgataccaaaggctatatcaaatgctggattagagtcatcccatgttgatttt 373 Query: 595 tatgaaattaatgaagcattttc 617 | ||| ||||||||||||||||| Sbjct: 374 tttgagattaatgaagcattttc 396
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 188 bits (95), Expect = 1e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 36 cagaaaaggatctcgttttggacatgacagcctcgttgatggcatgcttaaggatggcct 95 ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 3917668 cagaaaaggatctcgttttggacatgacactcttgttgatggcatgcttaaagatggcct 3917727 Query: 96 ttgggatgtatacggtgattgtgccatgggagtgtgcgctgagctttgtgctgacaatca 155 |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 3917728 ttgggatgtatacggtgattttgccatgggaaattgtgctgagctttgtgctgacaatca 3917787 Query: 156 tgccctgacgagagaagaccagg 178 ||| ||||| || |||||||||| Sbjct: 3917788 tgctctgacaagggaagaccagg 3917810 Score = 127 bits (64), Expect = 5e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 176 aggatgcatatgctattcaaagtaatgagcgtggaattgctgctcgtgacagtggtgctt 235 ||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 3918455 aggatgcctatgctattcaaagcaatgagcgtggaattgctgctcggaacagtggtgctt 3918514 Query: 236 ttgcatgggagattgttccg 255 |||||||||||||||||||| Sbjct: 3918515 ttgcatgggagattgttccg 3918534 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 508 gctcctgaactatttaccactaccccagcacttgccataccgaaggctctcacgaatgct 567 ||||||||| |||||||||||| ||| |||||||||||||| |||||||| | |||||| Sbjct: 3920245 gctcctgaattatttaccactagcccggcacttgccatacctaaggctcttgctaatgct 3920304 Query: 568 ggcctagagtcctctcgtgttgatttttatgaaattaatgaagcattttc 617 ||| | ||||| ||||||||||||| ||||||||||||||||| ||||| Sbjct: 3920305 ggcttggagtcttctcgtgttgattactatgaaattaatgaagccttttc 3920354 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 406 agtgatggcgctgcagcattagtattggtgagtgggaagaaggctcaagaacttggattg 465 ||||| || ||||| ||||||||||||||||||||| ||||||| |||||||||||| || Sbjct: 3919937 agtgacggtgctgccgcattagtattggtgagtgggcagaaggcacaagaacttggactg 3919996 Query: 466 caagtccttgcaaggatcaagggatttgctgacgcagcccaag 508 ||||| ||||| | ||||| |||||||| || ||||| |||| Sbjct: 3919997 caagttattgcacgaatcaaaggatttgcagatgcagctcaag 3920039 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 255 gattgaagttcctgttggtagagggaaacctgcagtacttgttgacaaagatgag 309 |||||||||||||||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 3918862 gattgaagttcctgttgggagagggaaaccaccggtacttgttgacaaagatgag 3918916 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 358 ttcaaggaaaatgctggtactgttactgctggaaatgcttctagtataag 407 |||||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct: 3919249 ttcaaggagaatggtggtactgttactgctgggaatgcttctagtataag 3919298
>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0574F11 Length = 159891 Score = 188 bits (95), Expect = 1e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 36 cagaaaaggatctcgttttggacatgacagcctcgttgatggcatgcttaaggatggcct 95 ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 49180 cagaaaaggatctcgttttggacatgacactcttgttgatggcatgcttaaagatggcct 49239 Query: 96 ttgggatgtatacggtgattgtgccatgggagtgtgcgctgagctttgtgctgacaatca 155 |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 49240 ttgggatgtatacggtgattttgccatgggaaattgtgctgagctttgtgctgacaatca 49299 Query: 156 tgccctgacgagagaagaccagg 178 ||| ||||| || |||||||||| Sbjct: 49300 tgctctgacaagggaagaccagg 49322 Score = 127 bits (64), Expect = 5e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 176 aggatgcatatgctattcaaagtaatgagcgtggaattgctgctcgtgacagtggtgctt 235 ||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 49967 aggatgcctatgctattcaaagcaatgagcgtggaattgctgctcggaacagtggtgctt 50026 Query: 236 ttgcatgggagattgttccg 255 |||||||||||||||||||| Sbjct: 50027 ttgcatgggagattgttccg 50046 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 508 gctcctgaactatttaccactaccccagcacttgccataccgaaggctctcacgaatgct 567 ||||||||| |||||||||||| ||| |||||||||||||| |||||||| | |||||| Sbjct: 51757 gctcctgaattatttaccactagcccggcacttgccatacctaaggctcttgctaatgct 51816 Query: 568 ggcctagagtcctctcgtgttgatttttatgaaattaatgaagcattttc 617 ||| | ||||| ||||||||||||| ||||||||||||||||| ||||| Sbjct: 51817 ggcttggagtcttctcgtgttgattactatgaaattaatgaagccttttc 51866 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 406 agtgatggcgctgcagcattagtattggtgagtgggaagaaggctcaagaacttggattg 465 ||||| || ||||| ||||||||||||||||||||| ||||||| |||||||||||| || Sbjct: 51449 agtgacggtgctgccgcattagtattggtgagtgggcagaaggcacaagaacttggactg 51508 Query: 466 caagtccttgcaaggatcaagggatttgctgacgcagcccaag 508 ||||| ||||| | ||||| |||||||| || ||||| |||| Sbjct: 51509 caagttattgcacgaatcaaaggatttgcagatgcagctcaag 51551 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 255 gattgaagttcctgttggtagagggaaacctgcagtacttgttgacaaagatgag 309 |||||||||||||||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 50374 gattgaagttcctgttgggagagggaaaccaccggtacttgttgacaaagatgag 50428 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 358 ttcaaggaaaatgctggtactgttactgctggaaatgcttctagtataag 407 |||||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct: 50761 ttcaaggagaatggtggtactgttactgctgggaatgcttctagtataag 50810
>gb|AY748246.1| Nicotiana tabacum peroxisomal acetoacetyl-coenzyme A thiolase (AACT2) mRNA, complete cds Length = 1522 Score = 99.6 bits (50), Expect = 1e-17 Identities = 203/254 (79%) Strand = Plus / Plus Query: 358 ttcaaggaaaatgctggtactgttactgctggaaatgcttctagtataagtgatggcgct 417 |||||||| |||| ||| |||| ||||| || |||||||| | |||||||||||||||| Sbjct: 853 ttcaaggagaatggaggttctgtcactgcaggcaatgcttccattataagtgatggcgct 912 Query: 418 gcagcattagtattggtgagtgggaagaaggctcaagaacttggattgcaagtccttgca 477 ||||||||||| |||||||||| | ||||| | ||||||||||||||||| ||| Sbjct: 913 gcagcattagttctggtgagtggacaaaaggcacttgaacttggattgcaagtaattggt 972 Query: 478 aggatcaagggatttgctgacgcagcccaagctcctgaactatttaccactaccccagca 537 ||||||| |||||||| || ||||| || || ||||| ||||||| || | ||||| Sbjct: 973 aggatcagaggatttgcagatgcagctcaggcacctgagttatttacaacagctccagct 1032 Query: 538 cttgccataccgaaggctctcacgaatgctggcctagagtcctctcgtgttgatttttat 597 ||||| ||||| || || | | |||| ||||||| ||||| |||| |||| | |||| Sbjct: 1033 cttgcaataccaaaagcaattaagaattctggccttgagtcatctcaaattgactattat 1092 Query: 598 gaaattaatgaagc 611 ||||| |||||||| Sbjct: 1093 gaaataaatgaagc 1106
>gb|AY105770.1| Zea mays PCO104693 mRNA sequence Length = 1879 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 223 gacagtggtgcttttgcatgggagattgttccgattgaagttcctgttggtagagggaaa 282 ||||| ||||| ||| | |||||||||||||| ||||| || || ||||||||||||| Sbjct: 854 gacagcggtgcattttcttgggagattgttcctgttgaaatttcttctggtagagggaaa 913 Query: 283 cctgcagtacttgttgacaaagatgagagtctagacaagtttgacgcagccaagctgaag 342 || |||| |||||||||| ||||||||||| | |||||||| ||| ||||||||| Sbjct: 914 ccaccagttgttgttgacaaggatgagagtcttgcaaagtttgatccagtaaagctgaag 973 Query: 343 aa 344 || Sbjct: 974 aa 975 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 372 tggtactgttactgctggaaatgcttctagtataagtgatggcgctgc 419 |||| |||| || ||||| ||| ||||||||||||||||||||||||| Sbjct: 1000 tggttctgtaacggctggcaattcttctagtataagtgatggcgctgc 1047 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 28 gctgaagccagaaaaggatctcgttttggacatgacagcctcgttgatggcatgcttaag 87 |||||||| ||| |||||| || || |||||||| ||| |||||||| ||||| ||| Sbjct: 659 gctgaagcaagacgaggatcacggttcggacatgatgtccttgttgatgggatgctcaag 718 Query: 88 gatggcctttgggatgt 104 |||||||| |||||||| Sbjct: 719 gatggcctgtgggatgt 735
>gb|AY748245.1| Nicotiana tabacum cytosolic acetoacetyl-coenzyme A thiolase (AACT1) mRNA, complete cds Length = 1455 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 361 aaggaaaatgctggtactgttactgctggaaatgcttctagtataagtgatggcgctgca 420 |||||||| | ||||||||| |||||||| || |||||||| ||||||||||| ||||| Sbjct: 757 aaggaaaaggatggtactgtgactgctggtaacgcttctagcataagtgatggagctgct 816 Query: 421 gcatt 425 ||||| Sbjct: 817 gcatt 821 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 10 aatgctccgaaatacatcgctgaagccagaaaaggatctcgttttggacatgacagcctc 69 |||| |||||||||||| || ||||| || || ||||||||| |||||||||| || || Sbjct: 406 aatgttccgaaatacattgcagaagcaaggaagggatctcgtcttggacatgatagtctt 465 Query: 70 gttgatggcatgcttaaggatgg 92 ||||| || |||||||| ||||| Sbjct: 466 gttgacggaatgcttaaagatgg 488 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 228 tggtgcttttgcatgggagattgttccgattga 260 |||||||||||||||||||||||| ||| |||| Sbjct: 624 tggtgcttttgcatgggagattgtgccggttga 656
>gb|DQ195208.1| Clostridium pasteurianum strain W5 thiolase (thl) gene, complete cds Length = 1179 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 372 tggtactgttactgctggaaatgcttctagtataagtgatggcgctgcagc 422 ||||||||| ||||||||||||||||| |||||| |||||| |||||||| Sbjct: 717 tggtactgtaactgctggaaatgcttcaggtataaatgatggagctgcagc 767
>gb|AF429387.1|AF429387 Hevea brasiliensis truncated acetyl Co-A acetyltransferase-like protein mRNA, complete cds Length = 960 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 226 agtggtgcttttgcatgggagattgttccgattgaagtt 264 |||||||| ||||||||||| ||||||||| |||||||| Sbjct: 637 agtggtgcctttgcatgggaaattgttccggttgaagtt 675
>gb|AF429383.1|AF429383 Hevea brasiliensis acetyl Co-A acetyltransferase mRNA, complete cds Length = 1669 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 379 gttactgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgag 437 ||||| |||||||||||||||| ||||||||||| || || |||||||| ||||||| Sbjct: 905 gttacagctggaaatgcttctatcataagtgatggtgcagctgcattagtcctggtgag 963 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 71 ttgatggcatgcttaaggatggcctttgggatgtata 107 ||||||||||||| || |||||||| ||||||||||| Sbjct: 603 ttgatggcatgctgaaagatggcctgtgggatgtata 639 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 587 ttgatttttatgaaattaatgaagcattttc 617 |||||| ||||||||| |||||||||||||| Sbjct: 1113 ttgattattatgaaataaatgaagcattttc 1143
>ref|NM_203172.2| Arabidopsis thaliana acetyl-CoA C-acetyltransferase AT5G47720 transcript variant AT5G47720.4 mRNA, complete cds Length = 2029 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 855 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 914 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 915 gagaaggctc 924
>ref|NM_001036951.1| Arabidopsis thaliana acetyl-CoA C-acetyltransferase AT5G47720 transcript variant AT5G47720.5 mRNA, complete cds Length = 2167 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 993 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 1052 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 1053 gagaaggctc 1062
>ref|NM_180819.2| Arabidopsis thaliana acetyl-CoA C-acetyltransferase AT5G47720 transcript variant AT5G47720.1 mRNA, complete cds Length = 2054 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 880 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 939 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 940 gagaaggctc 949
>ref|NM_203171.1| Arabidopsis thaliana acetyl-CoA C-acetyltransferase AT5G47720 transcript variant AT5G47720.3 mRNA, complete cds Length = 1986 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 812 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 871 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 872 gagaaggctc 881
>ref|NM_124146.2| Arabidopsis thaliana acetyl-CoA C-acetyltransferase AT5G47720 transcript variant AT5G47720.2 mRNA, complete cds Length = 1447 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 835 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 894 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 895 gagaaggctc 904
>ref|NM_180823.1| Arabidopsis thaliana EMB1276; acetyl-CoA C-acetyltransferase AT5G48230 (EMB1276) transcript variant AT5G48230.1 mRNA, complete cds Length = 1731 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 376 actgttactgctggaaatgcttctagtataagtgatgg 413 |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 805 actgttacagctggaaatgcgtctagcataagtgatgg 842
>ref|NM_124198.2| Arabidopsis thaliana EMB1276; acetyl-CoA C-acetyltransferase AT5G48230 (EMB1276) transcript variant AT5G48230.2 mRNA, complete cds Length = 1993 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 376 actgttactgctggaaatgcttctagtataagtgatgg 413 |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1067 actgttacagctggaaatgcgtctagcataagtgatgg 1104
>gb|AY091271.1| Arabidopsis thaliana putative acetyl-CoA C-acetyltransferase (At5g48230) mRNA, complete cds Length = 1228 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 376 actgttactgctggaaatgcttctagtataagtgatgg 413 |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 736 actgttacagctggaaatgcgtctagcataagtgatgg 773
>emb|X78116.1|RSLAACT R.sativus L. (Saxa knacker) AACT mRNA Length = 1462 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 31 gaagccagaaaaggatctcgttttggacatgacagcctcgttgatggcatgcttaaggat 90 ||||| |||||||||||| | ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 451 gaagcaagaaaaggatctaggtttggtcatgattctctcgtagatgggatgcttaaggat 510 Query: 91 ggcctttgggatgt 104 || || |||||||| Sbjct: 511 ggactgtgggatgt 524 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 358 ttcaaggaaaatgctggtactgttactgctggaaatgcttctagtataagtgatgg 413 |||||||| |||| || || ||||| ||||||||||| ||||| ||||||||||| Sbjct: 778 ttcaaggagaatggaggcacagttacagctggaaatgcctctagcataagtgatgg 833
>gb|AY059736.1| Arabidopsis thaliana putative acetyl-CoA C-acetyltransferase (At5g48230) mRNA, complete cds Length = 1531 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 376 actgttactgctggaaatgcttctagtataagtgatgg 413 |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 807 actgttacagctggaaatgcgtctagcataagtgatgg 844
>gb|AF364059.1| Arabidopsis thaliana acetoacetyl-CoA thiolase (AAT1) mRNA, complete cds Length = 1736 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 376 actgttactgctggaaatgcttctagtataagtgatgg 413 |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 938 actgttacagctggaaatgcgtctagcataagtgatgg 975
>gb|AF411795.1|AF411795 Arabidopsis thaliana AT5g47720/MCA23_4 mRNA sequence Length = 1492 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 879 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 938 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 939 gagaaggctc 948
>emb|BX831231.1|CNS0A1WG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZD09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1392 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 791 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 850 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 851 gagaaggctc 860
>emb|BX830943.1|CNS0A1NZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1417 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 835 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 894 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 895 gagaaggctc 904
>emb|BX831798.1|CNS09ZQ5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1386 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 812 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 871 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 872 gagaaggctc 881
>emb|BX830740.1|CNS09ZD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 865 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 924 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 925 gagaaggctc 934
>emb|BX833935.1|CNS09Z84 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1365 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 834 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 893 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 894 gagaaggctc 903
>gb|DQ347964.1| Picrorhiza kurrooa acetoacetyl-CoA thiolase mRNA, complete cds Length = 1515 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 358 ttcaaggaaaatgctggtactgttactgctggaaatgcttctagtataagtgatggcgct 417 |||||||||| || ||| ||||||| ||||| ||||| ||||| ||||||||||| ||| Sbjct: 790 ttcaaggaaactgggggttctgttacagctggcaatgcatctagcataagtgatggtgct 849 Query: 418 gc 419 || Sbjct: 850 gc 851 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 201 tgagcgtggaattgctgctcgtgacagtggtgcttttgcatgggagattgttccgattga 260 ||||||||| ||||| ||| || ||||||||||| ||||||||||||| ||| |||| Sbjct: 633 tgagcgtggtattgccgctaaagatagtggtgctttctcatgggagattgtgccggttga 692 Query: 261 agt 263 ||| Sbjct: 693 agt 695
>gb|AY088740.1| Arabidopsis thaliana clone 93821 mRNA, complete sequence Length = 1444 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagcattagtattggtgagtggg 441 |||||||||||||| || || ||||||||||| || ||||| ||||| | |||||||| Sbjct: 832 actgctggaaatgcatcaagcataagtgatggtgcggcagcgttagtgctagtgagtgga 891 Query: 442 aagaaggctc 451 ||||||||| Sbjct: 892 gagaaggctc 901
>ref|NM_183522.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1558 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 372 tggtactgttactgctggaaatgcttctagtataagtgatggcgctgc 419 |||| |||| ||||| || ||| ||||||||||||||||||| ||||| Sbjct: 855 tggttctgtaactgccggcaattcttctagtataagtgatggtgctgc 902 Score = 40.1 bits (20), Expect = 8.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 271 ggtagagggaaacctgcagtacttgttgacaaagatgagagtct 314 |||||||||||||| || | |||||||||| ||||||||||| Sbjct: 757 ggtagagggaaaccaccacttattgttgacaaggatgagagtct 800
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 48.1 bits (24), Expect = 0.035 Identities = 71/86 (82%), Gaps = 3/86 (3%) Strand = Plus / Minus Query: 343 aagttacgaccagcattcaaggaaaatgctggtactgttactgctggaaatgcttctagt 402 |||||| |||||||||||| |||| | |||||| ||||| ||||| ||||| || || Sbjct: 2515782 aagttaagaccagcattca---aaaaagatggtacagttacagctggtaatgcatcaggt 2515726 Query: 403 ataagtgatggcgctgcagcattagt 428 |||| |||||| ||||| |||||||| Sbjct: 2515725 ataaatgatggtgctgctgcattagt 2515700
>dbj|AK103194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121P11, full insert sequence Length = 1573 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 372 tggtactgttactgctggaaatgcttctagtataagtgatggcgctgc 419 |||| |||| ||||| || ||| ||||||||||||||||||| ||||| Sbjct: 850 tggttctgtaactgccggcaattcttctagtataagtgatggtgctgc 897 Score = 40.1 bits (20), Expect = 8.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 271 ggtagagggaaacctgcagtacttgttgacaaagatgagagtct 314 |||||||||||||| || | |||||||||| ||||||||||| Sbjct: 752 ggtagagggaaaccaccacttattgttgacaaggatgagagtct 795
>dbj|AK101017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149F12, full insert sequence Length = 1558 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 372 tggtactgttactgctggaaatgcttctagtataagtgatggcgctgc 419 |||| |||| ||||| || ||| ||||||||||||||||||| ||||| Sbjct: 855 tggttctgtaactgccggcaattcttctagtataagtgatggtgctgc 902 Score = 40.1 bits (20), Expect = 8.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 271 ggtagagggaaacctgcagtacttgttgacaaagatgagagtct 314 |||||||||||||| || | |||||||||| ||||||||||| Sbjct: 757 ggtagagggaaaccaccacttattgttgacaaggatgagagtct 800
>gb|AF374939.1| Prunus persica microsatellite BPPCT010 sequence Length = 730 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 373 ggtactgttactgctggaaatgcttct 399 ||||||||||||||||| ||||||||| Sbjct: 444 ggtactgttactgctgggaatgcttct 418
>gb|AC165246.2| Mus musculus BAC clone RP24-220A15 from chromosome 9, complete sequence Length = 161208 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ccgattgaagttcctgttggt 273 ||||||||||||||||||||| Sbjct: 53006 ccgattgaagttcctgttggt 53026
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagc 422 |||||||||||||||||| | || ||||||| |||||||| Sbjct: 1343666 actgctggaaatgcttctgggatctgtgatggtgctgcagc 1343706
>ref|XM_716682.1| Candida albicans SC5314 putative peroxisomal 3-ketoacyl-CoA thiolase (CaO19_1704), mRNA Length = 1233 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 587 ttgatttttatgaaattaatgaagcattt 615 ||||| |||||||||| |||||||||||| Sbjct: 989 ttgatatttatgaaatcaatgaagcattt 1017
>ref|XM_716561.1| Candida albicans SC5314 putative peroxisomal 3-ketoacyl-CoA thiolase (CaO19_9271), mRNA Length = 1233 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 587 ttgatttttatgaaattaatgaagcattt 615 ||||| |||||||||| |||||||||||| Sbjct: 989 ttgatatttatgaaatcaatgaagcattt 1017
>ref|XM_566797.1| Cryptococcus neoformans var. neoformans JEC21 acetyl-Coenzyme A acyltransferase 2 (CNA05060) partial mRNA Length = 1429 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 382 actgctggaaatgcttctagtataagtgatggcgctgcagc 422 |||||||||||||||||| | || ||||||| |||||||| Sbjct: 897 actgctggaaatgcttctgggatctgtgatggtgctgcagc 937
>ref|XM_724739.1| Plasmodium yoelii yoelii str. 17XNL acetyl-coa acetyltransferase (PY01991) partial mRNA Length = 1194 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 585 tgttgatttttatgaaattaatgaa 609 |||||||| |||||||||||||||| Sbjct: 942 tgttgattattatgaaattaatgaa 966
>ref|XM_736099.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000254.00.0) partial mRNA Length = 267 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 585 tgttgatttttatgaaattaatgaa 609 |||||||| |||||||||||||||| Sbjct: 15 tgttgattattatgaaattaatgaa 39
>ref|XM_674793.1| Plasmodium berghei strain ANKA acetyl-CoA acetyltransferase, (PB001025.03.0) partial mRNA Length = 1194 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 585 tgttgatttttatgaaattaatgaa 609 |||||||| |||||||||||||||| Sbjct: 942 tgttgattattatgaaattaatgaa 966
>gb|BC057875.1| Mus musculus sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A, mRNA (cDNA clone MGC:68148 IMAGE:5319572), complete cds Length = 3290 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ccgattgaagttcctgttggt 273 ||||||||||||||||||||| Sbjct: 916 ccgattgaagttcctgttggt 896
>emb|AJ851688.1| Gallus gallus mRNA for hypothetical protein, clone 17n23 Length = 6469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 ttagtattggtgagtgggaag 444 ||||||||||||||||||||| Sbjct: 2492 ttagtattggtgagtgggaag 2472
>dbj|AK156123.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830008I15 product:sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A, full insert sequence Length = 3297 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ccgattgaagttcctgttggt 273 ||||||||||||||||||||| Sbjct: 939 ccgattgaagttcctgttggt 919
>gb|AC016764.8| Homo sapiens BAC clone RP11-549G13 from 2, complete sequence Length = 155868 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 tgattgtgccatgggagtgtg 131 ||||||||||||||||||||| Sbjct: 32891 tgattgtgccatgggagtgtg 32911
>ref|NM_063055.3| Caenorhabditis elegans T02G5.7 (T02G5.7) mRNA, complete cds Length = 1310 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 166 agagaagaccaggatgcatatgctattcaaagt 198 |||||||| || ||||||||||||||| ||||| Sbjct: 527 agagaagaacaagatgcatatgctattgaaagt 559
>ref|NM_011352.2| Mus musculus sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A (Sema7a), mRNA Length = 3290 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ccgattgaagttcctgttggt 273 ||||||||||||||||||||| Sbjct: 916 ccgattgaagttcctgttggt 896
>gb|AF176670.1|AF176670 Mus musculus GPI-anchored membrane protein CDw108 precursor (CDw108) mRNA, complete cds Length = 2538 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ccgattgaagttcctgttggt 273 ||||||||||||||||||||| Sbjct: 905 ccgattgaagttcctgttggt 885
>gb|AF030699.1|AF030699 Mus musculus semaphorin L (SemaL) mRNA, partial cds Length = 1192 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ccgattgaagttcctgttggt 273 ||||||||||||||||||||| Sbjct: 912 ccgattgaagttcctgttggt 892
>emb|AJ430527.1|PWO430527 Passionfruit woodiness virus partial genomic RNA for polyprotein, genomic RNA Length = 1260 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 587 ttgatttttatgaaattaatg 607 ||||||||||||||||||||| Sbjct: 803 ttgatttttatgaaattaatg 823
>gb|U41105.2| Caenorhabditis elegans cosmid T02G5, complete sequence Length = 31951 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 166 agagaagaccaggatgcatatgctattcaaagt 198 |||||||| || ||||||||||||||| ||||| Sbjct: 6857 agagaagaacaagatgcatatgctattgaaagt 6889
>dbj|AB017532.1| Mus musculus mRNA for msemK1p, complete cds Length = 2608 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ccgattgaagttcctgttggt 273 ||||||||||||||||||||| Sbjct: 905 ccgattgaagttcctgttggt 885
>gb|AC087078.1| Caenorhabditis elegans cosmid Y34F4, complete sequence Length = 22976 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tgcgctgagctttgtgctga 149 |||||||||||||||||||| Sbjct: 21584 tgcgctgagctttgtgctga 21565
>gb|AC107868.9| Mus musculus chromosome 17, clone RP23-405A17, complete sequence Length = 193624 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 ttgatttttatgaaattaat 606 |||||||||||||||||||| Sbjct: 151160 ttgatttttatgaaattaat 151141
>gb|AC113038.14| Mus musculus chromosome 17, clone RP23-228K17, complete sequence Length = 226769 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 ttgatttttatgaaattaat 606 |||||||||||||||||||| Sbjct: 137571 ttgatttttatgaaattaat 137590
>gb|AY458634.2| Uncultured bacterium 314 clone EBAC750-09G06 genomic sequence Length = 48824 Score = 40.1 bits (20), Expect = 8.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 376 actgttactgctggaaatgcttctagtataagtgatggcgctgc 419 ||||| ||||| |||||||||||| |||| | |||||| ||||| Sbjct: 24673 actgtaactgcaggaaatgcttctggtattaatgatggtgctgc 24630
>gb|BC054299.1| Xenopus laevis acetyl-Coenzyme A acyltransferase 1, mRNA (cDNA clone MGC:64556 IMAGE:6879896), complete cds Length = 1718 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 tatgaaattaatgaagcatt 614 |||||||||||||||||||| Sbjct: 1031 tatgaaattaatgaagcatt 1050
>emb|CR699229.2|CNS0G2H5 Tetraodon nigroviridis full-length cDNA Length = 1465 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgcagtacttgttgacaaag 304 |||||||||||||||||||| Sbjct: 1217 tgcagtacttgttgacaaag 1198
>emb|CR695779.2|CNS0FZTB Tetraodon nigroviridis full-length cDNA Length = 1453 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgcagtacttgttgacaaag 304 |||||||||||||||||||| Sbjct: 1223 tgcagtacttgttgacaaag 1204
>emb|CR690658.2|CNS0FVV2 Tetraodon nigroviridis full-length cDNA Length = 1477 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgcagtacttgttgacaaag 304 |||||||||||||||||||| Sbjct: 1231 tgcagtacttgttgacaaag 1212
>gb|AC096917.3| Homo sapiens chromosome 3 clone RP11-94D19, complete sequence Length = 170184 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 atgctattcaaagtaatgag 204 |||||||||||||||||||| Sbjct: 54664 atgctattcaaagtaatgag 54645
>emb|BX571947.8| Zebrafish DNA sequence from clone DKEY-162F21 in linkage group 10, complete sequence Length = 269153 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 accagcattcaaggaaaatg 370 |||||||||||||||||||| Sbjct: 174843 accagcattcaaggaaaatg 174862
>gb|AF168681.1| Homo sapiens CRIM1 protein gene, partial cds; and FEZ2 gene, partial sequence Length = 236303 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 cagcattcaaggaaaatgctggta 376 ||||||||||||||||| |||||| Sbjct: 49675 cagcattcaaggaaaatcctggta 49652
>ref|NM_064916.3| Caenorhabditis elegans Y34F4.5 (Y34F4.5) mRNA, complete cds Length = 637 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tgcgctgagctttgtgctga 149 |||||||||||||||||||| Sbjct: 400 tgcgctgagctttgtgctga 419
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 271 ggtagagggaaacctgcagtacttgttgacaaagatgagagtct 314 |||||||||||||| || | |||||||||| ||||||||||| Sbjct: 549410 ggtagagggaaaccaccacttattgttgacaaggatgagagtct 549453
>ref|XM_243863.3| PREDICTED: Rattus norvegicus sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A (predicted) (Sema7a_predicted), mRNA Length = 3295 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 cgattgaagttcctgttggt 273 |||||||||||||||||||| Sbjct: 915 cgattgaagttcctgttggt 896
>gb|AC007378.4| Homo sapiens BAC clone RP11-78I14 from 2, complete sequence Length = 179357 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 cagcattcaaggaaaatgctggta 376 ||||||||||||||||| |||||| Sbjct: 129488 cagcattcaaggaaaatcctggta 129511
>emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chromosome 4, complete sequence Length = 205765 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 accactaccccagcacttgc 542 |||||||||||||||||||| Sbjct: 87115 accactaccccagcacttgc 87134
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 8.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 271 ggtagagggaaacctgcagtacttgttgacaaagatgagagtct 314 |||||||||||||| || | |||||||||| ||||||||||| Sbjct: 24015 ggtagagggaaaccaccacttattgttgacaaggatgagagtct 24058
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21 Length = 59372 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 376 actgttactgctggaaatgcttctagtataag 407 |||||||| ||||||||||| ||||| ||||| Sbjct: 45031 actgttacagctggaaatgcgtctagcataag 45000 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,255,480 Number of Sequences: 3902068 Number of extensions: 5255480 Number of successful extensions: 99372 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 99112 Number of HSP's gapped (non-prelim): 255 length of query: 621 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 598 effective length of database: 17,143,297,704 effective search space: 10251692026992 effective search space used: 10251692026992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
