ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags26b23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HIS8_BUCDN (Q84I53) Histidinol-phosphate aminotransferase (EC 2.... 31 2.8
2P2RX7_MOUSE (Q9Z1M0) P2X purinoceptor 7 (ATP receptor) (P2X7) (P... 30 6.2

>HIS8_BUCDN (Q84I53) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 363

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +1

Query: 367 SLHKRLTQVNYTHSIEHRVESLISFSTWVTNVLEQVSKLKSILFSYTMFFSQFFYL 534
           SLHK     NY   +++RV  L +   W+ N L+++S +K I  S T +    F++
Sbjct: 257 SLHK-----NYIKLMQNRVLDLNANRVWLINKLKKISSVKKIFQSNTNYILVQFFM 307



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>P2RX7_MOUSE (Q9Z1M0) P2X purinoceptor 7 (ATP receptor) (P2X7) (Purinergic|
           receptor) (P2Z receptor)
          Length = 595

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +3

Query: 30  KKML*KDFSISLNLDVFG------IFHTATYLGAFSRRLHGLNNLWINKLTSTYLSQFCR 191
           K+ L K F I  ++ VFG      I     Y+G+ +    GL  + I+ L +TY S FCR
Sbjct: 306 KRTLIKAFGIRFDILVFGTGGKFDIIQLVVYIGS-TLSYFGLATVCIDLLINTYSSAFCR 364


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,640,693
Number of Sequences: 219361
Number of extensions: 1554519
Number of successful extensions: 3424
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3424
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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