>ref|XM_475675.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1191

 Score =  246 bits (124), Expect = 7e-62
 Identities = 313/376 (83%)
 Strand = Plus / Plus

                                                                        
Query: 13   ttgcagggacaaaggataaacgtgccattacaacccaacaggtaacacttttcaaggtac 72
            ||||||||||||| |||||||||||  ||||||| |||||||| ||  |||||||| || 
Sbjct: 716  ttgcagggacaaaagataaacgtgctgttacaacacaacaggtgactgttttcaagatat 775

                                                                        
Query: 73   atgctagtaggttggctgctctaaataataaactcactggcattaaagttggagatttta 132
              || |  || |||||||| || ||||||  |||   ||| |||||||||||| | ||||
Sbjct: 776  cagccaacagattggctgcacttaataatcgactatttggaattaaagttggaaacttta 835

                                                                        
Query: 133  attatgtgaaggagggccttgttcttggtcaactcatgggaaaccgatttacaattacct 192
             ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||  
Sbjct: 836  gttatgtgaaggagggacttgttcttggtcaactaatgggaaatcgatttacaattactc 895

                                                                        
Query: 193  taaggagtgttatcgcagaatcagaagacgtgattaaggcagctgtcgatggattgataa 252
            | ||| ||||| | ||||||||||||||| | || |||||  |||| || || ||   ||
Sbjct: 896  tgaggggtgttgttgcagaatcagaagacataataaaggcttctgtggagggcttaggaa 955

                                                                        
Query: 253  aaagtggatttatcaattactatggtctacagcgttttggtagtgcttcagtaccaactc 312
            | | |||||||||||| ||||||||  | ||||||||||| |||| ||||||||| ||||
Sbjct: 956  agaatggatttatcaactactatgggttgcagcgttttggaagtggttcagtacctactc 1015

                                                                        
Query: 313  atctcgttggtgctgctttgctgagaggagagtggagaagtgctgttagcttgattcttg 372
            | || ||||| ||||||||||| |||||||||||||||||| |||| |  ||||||||||
Sbjct: 1016 accttgttggagctgctttgcttagaggagagtggagaagttctgtaaatttgattcttg 1075

                            
Query: 373  atccaagggaaggaga 388
            ||||||||||||||||
Sbjct: 1076 atccaagggaaggaga 1091

>dbj|AK066384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065A19, full
            insert sequence
          Length = 2746

 Score =  246 bits (124), Expect = 7e-62
 Identities = 313/376 (83%)
 Strand = Plus / Plus

                                                                        
Query: 13   ttgcagggacaaaggataaacgtgccattacaacccaacaggtaacacttttcaaggtac 72
            ||||||||||||| |||||||||||  ||||||| |||||||| ||  |||||||| || 
Sbjct: 793  ttgcagggacaaaagataaacgtgctgttacaacacaacaggtgactgttttcaagatat 852

                                                                        
Query: 73   atgctagtaggttggctgctctaaataataaactcactggcattaaagttggagatttta 132
              || |  || |||||||| || ||||||  |||   ||| |||||||||||| | ||||
Sbjct: 853  cagccaacagattggctgcacttaataatcgactatttggaattaaagttggaaacttta 912

                                                                        
Query: 133  attatgtgaaggagggccttgttcttggtcaactcatgggaaaccgatttacaattacct 192
             ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||  
Sbjct: 913  gttatgtgaaggagggacttgttcttggtcaactaatgggaaatcgatttacaattactc 972

                                                                        
Query: 193  taaggagtgttatcgcagaatcagaagacgtgattaaggcagctgtcgatggattgataa 252
            | ||| ||||| | ||||||||||||||| | || |||||  |||| || || ||   ||
Sbjct: 973  tgaggggtgttgttgcagaatcagaagacataataaaggcttctgtggagggcttaggaa 1032

                                                                        
Query: 253  aaagtggatttatcaattactatggtctacagcgttttggtagtgcttcagtaccaactc 312
            | | |||||||||||| ||||||||  | ||||||||||| |||| ||||||||| ||||
Sbjct: 1033 agaatggatttatcaactactatgggttgcagcgttttggaagtggttcagtacctactc 1092

                                                                        
Query: 313  atctcgttggtgctgctttgctgagaggagagtggagaagtgctgttagcttgattcttg 372
            | || ||||| ||||||||||| |||||||||||||||||| |||| |  ||||||||||
Sbjct: 1093 accttgttggagctgctttgcttagaggagagtggagaagttctgtaaatttgattcttg 1152

                            
Query: 373  atccaagggaaggaga 388
            ||||||||||||||||
Sbjct: 1153 atccaagggaaggaga 1168



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 133/166 (80%)
 Strand = Plus / Plus

                                                                        
Query: 414  gaacattataaggaacatggtgatattgatgtggctattaggaattttcctcggcgtctc 473
            |||||||| ||||| ||||||||||||||| ||||  | ||||| || ||||| | ||| 
Sbjct: 1285 gaacattacaaggagcatggtgatattgatatggcactaaggaacttccctcgacatctt 1344

                                                                        
Query: 474  atagcagagagggccatccttcagcgtttgaagaagtaccctggcaactatctacaagca 533
             |||| |||| ||| || |||||  |||||||||| | |||||| |||||||| ||||||
Sbjct: 1345 gtagccgagaaggctattcttcaatgtttgaagaaatgccctggtaactatctgcaagca 1404

                                                          
Query: 534  ctaatggctatacctagaacactgagactgatgtatgtacatagtt 579
             ||| |  |||||| |||||| |  || ||||||| || |||||||
Sbjct: 1405 ttaaagagtataccaagaacattacgaatgatgtacgttcatagtt 1450

>ref|NM_191438.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1821

 Score =  236 bits (119), Expect = 7e-59
 Identities = 233/271 (85%)
 Strand = Plus / Plus

                                                                       
Query: 13  ttgcagggacaaaggataaacgtgccattacaacccaacaggtaacacttttcaaggtac 72
           ||||||| |||||||||||||| ||  ||||||| |||||||| ||  |||||||||| |
Sbjct: 575 ttgcaggaacaaaggataaacgcgctgttacaactcaacaggtcacggttttcaaggtgc 634

                                                                       
Query: 73  atgctagtaggttggctgctctaaataataaactcactggcattaaagttggagatttta 132
           | ||||||||||||| |||||| || | ||| |||| |||||||||||||||||| || |
Sbjct: 635 aagctagtaggttggttgctcttaacagtaagctcattggcattaaagttggagacttca 694

                                                                       
Query: 133 attatgtgaaggagggccttgttcttggtcaactcatgggaaaccgatttacaattacct 192
            |||||||||||| || |||| |||||||||||| ||||| |||||||||||||||||||
Sbjct: 695 gttatgtgaaggaaggtcttgctcttggtcaactgatggggaaccgatttacaattacct 754

                                                                       
Query: 193 taaggagtgttatcgcagaatcagaagacgtgattaaggcagctgtcgatggattgataa 252
           | ||||||||| |  |||| || ||||| ||||||||||| ||| | |||||||| ||||
Sbjct: 755 tgaggagtgttgttacagagtctgaagatgtgattaaggctgctcttgatggattaataa 814

                                          
Query: 253 aaagtggatttatcaattactatggtctaca 283
            || ||||||||||||||| |||||||||||
Sbjct: 815 caaatggatttatcaattattatggtctaca 845



 Score =  159 bits (80), Expect = 1e-35
 Identities = 86/88 (97%)
 Strand = Plus / Plus

                                                                       
Query: 492 cttcagcgtttgaagaagtaccctggcaactatctacaagcactaatggctatacctaga 551
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 cttcagcgcttgaagaagtaccctggcaactatctacaagcactaatggctatacctaga 906

                                       
Query: 552 acactgagactgatgtatgtacatagtt 579
           |||||||||||||||||||| |||||||
Sbjct: 907 acactgagactgatgtatgtgcatagtt 934

>gb|AY104823.1| Zea mays PCO129663 mRNA sequence
          Length = 1516

 Score =  204 bits (103), Expect = 2e-49
 Identities = 268/323 (82%)
 Strand = Plus / Plus

                                                                       
Query: 257 tggatttatcaattactatggtctacagcgttttggtagtgcttcagtaccaactcatct 316
           |||||||||||| ||||||||| | ||||| ||||| |||| |||| ||||||| |||||
Sbjct: 92  tggatttatcaactactatggtttgcagcggtttggaagtggttcaataccaacacatct 151

                                                                       
Query: 317 cgttggtgctgctttgctgagaggagagtggagaagtgctgttagcttgattcttgatcc 376
            ||||| ||||||||||| |||||||||||||    |||||| | |||||||||||||||
Sbjct: 152 tgttggggctgctttgcttagaggagagtggaaggttgctgtaaacttgattcttgatcc 211

                                                                       
Query: 377 aagggaaggagagtatgatgacatgaatggggtaagggaacattataaggaacatggtga 436
           |||||||||||||  ||||||||| |||| |||  |  ||| ||| || |||||||||||
Sbjct: 212 aagggaaggagagcgtgatgacatcaatgaggtgcgcaaacgttacaaagaacatggtga 271

                                                                       
Query: 437 tattgatgtggctattaggaattttcctcggcgtctcatagcagagagggccatccttca 496
            |||||| ||||  | || || || ||||| |  ||| |||| ||||||||||| |||||
Sbjct: 272 cattgatatggcactgagaaacttccctcgacacctcgtagctgagagggccatacttca 331

                                                                       
Query: 497 gcgtttgaagaagtaccctggcaactatctacaagcactaatggctatacctagaacact 556
             || ||||||| | |||||| ||| ||||||||||||| | || |||||| ||||||||
Sbjct: 332 atgtctgaagaaatgccctggtaaccatctacaagcactcaagggtataccaagaacact 391

                                  
Query: 557 gagactgatgtatgtacatagtt 579
           |||| ||||||| ||||||||||
Sbjct: 392 gagaatgatgtacgtacatagtt 414

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  151 bits (76), Expect = 3e-33
 Identities = 79/80 (98%)
 Strand = Plus / Minus

                                                                            
Query: 492      cttcagcgtttgaagaagtaccctggcaactatctacaagcactaatggctatacctaga 551
                |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32656956 cttcagcgcttgaagaagtaccctggcaactatctacaagcactaatggctatacctaga 32656897

                                    
Query: 552      acactgagactgatgtatgt 571
                ||||||||||||||||||||
Sbjct: 32656896 acactgagactgatgtatgt 32656877



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                            
Query: 283      agcgttttggtagtgcttcagtaccaactcatctcgttggtgctgctttgctgagaggag 342
                |||| |||||||||| |||||| || | ||| |  ||||||| ||||||||| |||||||
Sbjct: 32657822 agcgctttggtagtggttcagtgccgaatcaccaagttggtgttgctttgcttagaggag 32657763

                                                              
Query: 343      agtggagaagtgctgttagcttgattcttgatccaagggaaggaga 388
                ||||||||| |||||||   |||||||||| |||||||||||||||
Sbjct: 32657762 agtggagaaatgctgttcaattgattcttggtccaagggaaggaga 32657717



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                            
Query: 134      ttatgtgaaggagggccttgttcttggtcaactcatgggaaaccgatttacaattacctt 193
                |||||||||||| || |||| |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 32658709 ttatgtgaaggaaggtcttgctcttggtcaactgatggggaaccgatttacaattacctt 32658650



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                            
Query: 195      aggagtgttatcgcagaatcagaagacgtgattaaggcagctgtcgatggattgataaaa 254
                ||||||||| |  |||| || ||||| ||||||||||| ||| | |||||||| |||| |
Sbjct: 32658247 aggagtgttgttacagagtctgaagatgtgattaaggctgctcttgatggattaataaca 32658188

                                             
Query: 255      agtggatttatcaattactatggtctaca 283
                | ||||||||||||||| |||||||||||
Sbjct: 32658187 aatggatttatcaattattatggtctaca 32658159



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                            
Query: 61       ttttcaaggtacatgctagtaggttggctgctctaaataataaactcactggcattaaag 120
                |||||||||| || ||||||||||||| |||||| || | ||| |||| |||||||||||
Sbjct: 32658872 ttttcaaggtgcaagctagtaggttggttgctcttaacagtaagctcattggcattaaag 32658813

                       
Query: 121      ttggaga 127
                |||||||
Sbjct: 32658812 ttggaga 32658806



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 13       ttgcagggacaaaggataaacgtgccattacaacccaacaggta 56
                ||||||| |||||||||||||| ||  ||||||| |||||||||
Sbjct: 32659208 ttgcaggaacaaaggataaacgcgctgttacaactcaacaggta 32659165

>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0695H10
          Length = 136883

 Score =  151 bits (76), Expect = 3e-33
 Identities = 79/80 (98%)
 Strand = Plus / Minus

                                                                          
Query: 492    cttcagcgtttgaagaagtaccctggcaactatctacaagcactaatggctatacctaga 551
              |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119751 cttcagcgcttgaagaagtaccctggcaactatctacaagcactaatggctatacctaga 119692

                                  
Query: 552    acactgagactgatgtatgt 571
              ||||||||||||||||||||
Sbjct: 119691 acactgagactgatgtatgt 119672



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                          
Query: 283    agcgttttggtagtgcttcagtaccaactcatctcgttggtgctgctttgctgagaggag 342
              |||| |||||||||| |||||| || | ||| |  ||||||| ||||||||| |||||||
Sbjct: 120617 agcgctttggtagtggttcagtgccgaatcaccaagttggtgttgctttgcttagaggag 120558

                                                            
Query: 343    agtggagaagtgctgttagcttgattcttgatccaagggaaggaga 388
              ||||||||| |||||||   |||||||||| |||||||||||||||
Sbjct: 120557 agtggagaaatgctgttcaattgattcttggtccaagggaaggaga 120512



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                          
Query: 134    ttatgtgaaggagggccttgttcttggtcaactcatgggaaaccgatttacaattacctt 193
              |||||||||||| || |||| |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 121504 ttatgtgaaggaaggtcttgctcttggtcaactgatggggaaccgatttacaattacctt 121445



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                          
Query: 195    aggagtgttatcgcagaatcagaagacgtgattaaggcagctgtcgatggattgataaaa 254
              ||||||||| |  |||| || ||||| ||||||||||| ||| | |||||||| |||| |
Sbjct: 121042 aggagtgttgttacagagtctgaagatgtgattaaggctgctcttgatggattaataaca 120983

                                           
Query: 255    agtggatttatcaattactatggtctaca 283
              | ||||||||||||||| |||||||||||
Sbjct: 120982 aatggatttatcaattattatggtctaca 120954



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                          
Query: 61     ttttcaaggtacatgctagtaggttggctgctctaaataataaactcactggcattaaag 120
              |||||||||| || ||||||||||||| |||||| || | ||| |||| |||||||||||
Sbjct: 121667 ttttcaaggtgcaagctagtaggttggttgctcttaacagtaagctcattggcattaaag 121608

                     
Query: 121    ttggaga 127
              |||||||
Sbjct: 121607 ttggaga 121601



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 13     ttgcagggacaaaggataaacgtgccattacaacccaacaggta 56
              ||||||| |||||||||||||| ||  ||||||| |||||||||
Sbjct: 122003 ttgcaggaacaaaggataaacgcgctgttacaactcaacaggta 121960

>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0490D09
          Length = 154430

 Score =  151 bits (76), Expect = 3e-33
 Identities = 79/80 (98%)
 Strand = Plus / Minus

                                                                         
Query: 492   cttcagcgtttgaagaagtaccctggcaactatctacaagcactaatggctatacctaga 551
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19751 cttcagcgcttgaagaagtaccctggcaactatctacaagcactaatggctatacctaga 19692

                                 
Query: 552   acactgagactgatgtatgt 571
             ||||||||||||||||||||
Sbjct: 19691 acactgagactgatgtatgt 19672



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                         
Query: 283   agcgttttggtagtgcttcagtaccaactcatctcgttggtgctgctttgctgagaggag 342
             |||| |||||||||| |||||| || | ||| |  ||||||| ||||||||| |||||||
Sbjct: 20617 agcgctttggtagtggttcagtgccgaatcaccaagttggtgttgctttgcttagaggag 20558

                                                           
Query: 343   agtggagaagtgctgttagcttgattcttgatccaagggaaggaga 388
             ||||||||| |||||||   |||||||||| |||||||||||||||
Sbjct: 20557 agtggagaaatgctgttcaattgattcttggtccaagggaaggaga 20512



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                         
Query: 134   ttatgtgaaggagggccttgttcttggtcaactcatgggaaaccgatttacaattacctt 193
             |||||||||||| || |||| |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 21504 ttatgtgaaggaaggtcttgctcttggtcaactgatggggaaccgatttacaattacctt 21445



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                         
Query: 195   aggagtgttatcgcagaatcagaagacgtgattaaggcagctgtcgatggattgataaaa 254
             ||||||||| |  |||| || ||||| ||||||||||| ||| | |||||||| |||| |
Sbjct: 21042 aggagtgttgttacagagtctgaagatgtgattaaggctgctcttgatggattaataaca 20983

                                          
Query: 255   agtggatttatcaattactatggtctaca 283
             | ||||||||||||||| |||||||||||
Sbjct: 20982 aatggatttatcaattattatggtctaca 20954



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                         
Query: 61    ttttcaaggtacatgctagtaggttggctgctctaaataataaactcactggcattaaag 120
             |||||||||| || ||||||||||||| |||||| || | ||| |||| |||||||||||
Sbjct: 21667 ttttcaaggtgcaagctagtaggttggttgctcttaacagtaagctcattggcattaaag 21608

                    
Query: 121   ttggaga 127
             |||||||
Sbjct: 21607 ttggaga 21601



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 13    ttgcagggacaaaggataaacgtgccattacaacccaacaggta 56
             ||||||| |||||||||||||| ||  ||||||| |||||||||
Sbjct: 22003 ttgcaggaacaaaggataaacgcgctgttacaactcaacaggta 21960

>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score =  123 bits (62), Expect = 7e-25
 Identities = 95/106 (89%)
 Strand = Plus / Plus

                                                                         
Query: 283   agcgttttggtagtgcttcagtaccaactcatctcgttggtgctgctttgctgagaggag 342
             |||||||||| |||| ||||||||| ||||| || ||||| ||||||||||| |||||||
Sbjct: 89710 agcgttttggaagtggttcagtacctactcaccttgttggagctgctttgcttagaggag 89769

                                                           
Query: 343   agtggagaagtgctgttagcttgattcttgatccaagggaaggaga 388
             ||||||||||| |||| |  ||||||||||||||||||||||||||
Sbjct: 89770 agtggagaagttctgtaaatttgattcttgatccaagggaaggaga 89815



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                      
Query: 134   ttatgtgaaggagggccttgttcttggtcaactcatgggaaaccgatttacaattac 190
             ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 89239 ttatgtgaaggagggacttgttcttggtcaactaatgggaaatcgatttacaattac 89295



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 13    ttgcagggacaaaggataaacgtgccattacaacccaacaggta 56
             ||||||||||||| |||||||||||  ||||||| |||||||||
Sbjct: 88528 ttgcagggacaaaagataaacgtgctgttacaacacaacaggta 88571



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 414   gaacattataaggaacatggtgatattgatgtggc 448
             |||||||| ||||| ||||||||||||||| ||||
Sbjct: 89932 gaacattacaaggagcatggtgatattgatatggc 89966

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  123 bits (62), Expect = 7e-25
 Identities = 95/106 (89%)
 Strand = Plus / Plus

                                                                            
Query: 283      agcgttttggtagtgcttcagtaccaactcatctcgttggtgctgctttgctgagaggag 342
                |||||||||| |||| ||||||||| ||||| || ||||| ||||||||||| |||||||
Sbjct: 25020857 agcgttttggaagtggttcagtacctactcaccttgttggagctgctttgcttagaggag 25020916

                                                              
Query: 343      agtggagaagtgctgttagcttgattcttgatccaagggaaggaga 388
                ||||||||||| |||| |  ||||||||||||||||||||||||||
Sbjct: 25020917 agtggagaagttctgtaaatttgattcttgatccaagggaaggaga 25020962



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                         
Query: 134      ttatgtgaaggagggccttgttcttggtcaactcatgggaaaccgatttacaattac 190
                ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 25020386 ttatgtgaaggagggacttgttcttggtcaactaatgggaaatcgatttacaattac 25020442



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 13       ttgcagggacaaaggataaacgtgccattacaacccaacaggta 56
                ||||||||||||| |||||||||||  ||||||| |||||||||
Sbjct: 25019675 ttgcagggacaaaagataaacgtgctgttacaacacaacaggta 25019718



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 414      gaacattataaggaacatggtgatattgatgtggc 448
                |||||||| ||||| ||||||||||||||| ||||
Sbjct: 25021079 gaacattacaaggagcatggtgatattgatatggc 25021113

>gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J14 genomic sequence, complete
             sequence
          Length = 93234

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 281   acagcgttttggtagtgcttcagtaccaac 310
             |||||||||||| |||| ||||||||||||
Sbjct: 81178 acagcgttttggaagtggttcagtaccaac 81207



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 144   gagggccttgttcttggtcaactcatgggaaaccgatttacaattaccttaagg 197
             ||||||||| | ||||| || |||||||||||| ||||||| || || ||||||
Sbjct: 80718 gagggccttctccttgggcagctcatgggaaacagatttactatcacattaagg 80771

>ref|NM_111354.2| Arabidopsis thaliana pseudouridylate synthase AT3G04820 mRNA,
            complete cds
          Length = 2244

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 282  cagcgttttggtagtgcttcagtaccaac 310
            ||||||||||| |||| ||||||||||||
Sbjct: 1048 cagcgttttggaagtggttcagtaccaac 1076



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 144 gagggccttgttcttggtcaactcatgggaaaccgatttac 184
           ||||||||| | ||||| || |||||||||||| |||||||
Sbjct: 910 gagggccttctccttgggcagctcatgggaaacagatttac 950



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 556  tgagactgatgtatgtacatagtt 579
            ||||| ||||||||||||||||||
Sbjct: 1370 tgagaatgatgtatgtacatagtt 1393

>gb|AY735600.1| Arabidopsis thaliana hypothetical protein AT3G04820 mRNA, complete
            cds
          Length = 2400

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 282  cagcgttttggtagtgcttcagtaccaac 310
            ||||||||||| |||| ||||||||||||
Sbjct: 1049 cagcgttttggaagtggttcagtaccaac 1077



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 144 gagggccttgttcttggtcaactcatgggaaaccgatttac 184
           ||||||||| | ||||| || |||||||||||| |||||||
Sbjct: 911 gagggccttctccttgggcagctcatgggaaacagatttac 951



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 556  tgagactgatgtatgtacatagtt 579
            ||||| ||||||||||||||||||
Sbjct: 1323 tgagaatgatgtatgtacatagtt 1346

>gb|AY954844.1| Arabidopsis thaliana hypothetical protein (At3g04820) mRNA, complete
            cds
          Length = 2148

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 282  cagcgttttggtagtgcttcagtaccaac 310
            ||||||||||| |||| ||||||||||||
Sbjct: 1048 cagcgttttggaagtggttcagtaccaac 1076



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 144 gagggccttgttcttggtcaactcatgggaaaccgatttac 184
           ||||||||| | ||||| || |||||||||||| |||||||
Sbjct: 910 gagggccttctccttgggcagctcatgggaaacagatttac 950



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 556  tgagactgatgtatgtacatagtt 579
            ||||| ||||||||||||||||||
Sbjct: 1322 tgagaatgatgtatgtacatagtt 1345

>gb|AC166932.6| Mus musculus chromosome 7, clone RP23-349I13, complete sequence
          Length = 226889

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    actgagactgatgtatgtac 573
              ||||||||||||||||||||
Sbjct: 184494 actgagactgatgtatgtac 184475

>gb|AC113065.16| Mus musculus chromosome 7, clone RP23-263E7, complete sequence
          Length = 202134

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 554    actgagactgatgtatgtac 573
              ||||||||||||||||||||
Sbjct: 168480 actgagactgatgtatgtac 168499

>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 463     ctcggcgtctcatagcagagaggg 486
               |||||||| |||||||||||||||
Sbjct: 1724079 ctcggcgtatcatagcagagaggg 1724102

>gb|AC113053.21| Mus musculus chromosome 17, clone RP23-250J2, complete sequence
          Length = 234124

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   ttggagattttaattatgtg 140
             ||||||||||||||||||||
Sbjct: 47700 ttggagattttaattatgtg 47719

>gb|AC118476.15| Mus musculus chromosome 9, clone RP23-242K3, complete sequence
          Length = 197683

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    ggagagtatgatgacatgaa 403
              ||||||||||||||||||||
Sbjct: 106590 ggagagtatgatgacatgaa 106609

>gb|AC003992.2| Homo sapiens BAC clone CTA-250D13 from 7, complete sequence
          Length = 176109

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  acttttcaaggtacatgcta 78
           ||||||||||||||||||||
Sbjct: 151 acttttcaaggtacatgcta 132

>gb|AC073626.7| Homo sapiens BAC clone RP11-95P9 from 7, complete sequence
          Length = 136901

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     acttttcaaggtacatgcta 78
              ||||||||||||||||||||
Sbjct: 136852 acttttcaaggtacatgcta 136833

>ref|XM_838442.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1359)
            partial mRNA
          Length = 2451

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 463  ctcggcgtctcatagcagagaggg 486
            |||||||| |||||||||||||||
Sbjct: 1857 ctcggcgtatcatagcagagaggg 1880

>ref|XM_822700.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.389.0390)
           partial mRNA
          Length = 3756

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 96  aataataaactcactggcat 115
           ||||||||||||||||||||
Sbjct: 36  aataataaactcactggcat 17

>gb|AC163613.5| Mus musculus BAC clone RP24-150N2 from chromosome 1, complete sequence
          Length = 135256

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   attaaagttggagattttaa 133
             ||||||||||||||||||||
Sbjct: 77450 attaaagttggagattttaa 77431

>emb|CR378672.1| Photobacterium profundum SS9; segment 10/12
          Length = 348526

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 431    tggtgatattgatgtggcta 450
              ||||||||||||||||||||
Sbjct: 156311 tggtgatattgatgtggcta 156292

>gb|AC027514.6| Homo sapiens chromosome 18, clone RP11-173A16, complete sequence
          Length = 179676

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 93    ctaaataataaactcactggcatt 116
             |||||||||||| |||||||||||
Sbjct: 95888 ctaaataataaattcactggcatt 95911

>gb|AC020611.15| Homo sapiens 12 BAC RP11-1029F8 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 188972

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   aacactgagactgatgtatg 570
             ||||||||||||||||||||
Sbjct: 58241 aacactgagactgatgtatg 58222

>gb|AY065834.1| Fundulus heteroclitus deiodinase type 2 (Dio2) gene, complete cds
          Length = 10789

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 85   tggctgctctaaataataaa 104
            ||||||||||||||||||||
Sbjct: 4571 tggctgctctaaataataaa 4552

>dbj|AP005268.1| Pan troglodytes DNA, chromosome 7 clone:PTB-029M21, complete sequence
          Length = 154715

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     acttttcaaggtacatgcta 78
              ||||||||||||||||||||
Sbjct: 130569 acttttcaaggtacatgcta 130588

>dbj|AP000977.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-730K11, complete
             sequence
          Length = 187080

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 538   tggctatacctagaacactg 557
             ||||||||||||||||||||
Sbjct: 69405 tggctatacctagaacactg 69386

>gb|AC163745.4| Pan troglodytes BAC clone CH251-381N15 from chromosome 7, complete
              sequence
          Length = 185876

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     acttttcaaggtacatgcta 78
              ||||||||||||||||||||
Sbjct: 124402 acttttcaaggtacatgcta 124383

>gb|AC131797.3| Mus musculus BAC clone RP24-496C20 from 1, complete sequence
          Length = 139995

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    attaaagttggagattttaa 133
              ||||||||||||||||||||
Sbjct: 117471 attaaagttggagattttaa 117490

>gb|AC132457.4| Mus musculus BAC clone RP23-140B24 from 7, complete sequence
          Length = 210092

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 554   actgagactgatgtatgtac 573
             ||||||||||||||||||||
Sbjct: 31558 actgagactgatgtatgtac 31577

>gb|AC167132.12| Mus musculus chromosome 8, clone RP24-335A22, complete sequence
          Length = 203284

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   agggaaggagagtatgatga 397
             ||||||||||||||||||||
Sbjct: 17236 agggaaggagagtatgatga 17217


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,103,025
Number of Sequences: 3902068
Number of extensions: 5103025
Number of successful extensions: 93779
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93623
Number of HSP's gapped (non-prelim): 153
length of query: 579
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 556
effective length of database: 17,143,297,704
effective search space: 9531673523424
effective search space used: 9531673523424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)