>GIGAN_ORYSA (Q9AWL7) GIGANTEA protein|
          Length = 1160

 Score =  319 bits (817), Expect = 4e-87
 Identities = 159/185 (85%), Positives = 164/185 (88%)
 Frame = +3

Query: 3    RNGGYRGSQTLLSSVISEKQELCFSVVSLLWHKLIASPETQMSAESTSAHQGWRKVVDAL 182
            RNGGYRGSQTLL SV+SEKQELCFSVVSLLW KLIASPE QMSAESTSAHQGWRKVVDAL
Sbjct: 878  RNGGYRGSQTLLRSVLSEKQELCFSVVSLLWQKLIASPEMQMSAESTSAHQGWRKVVDAL 937

Query: 183  CDVVSASPAKASTAIVLQAEKDLQPWIARDDEEGQKMWRVNQRIVKLIAELMRNHDSPEX 362
            CD+VSASP KAS AIVLQAEKDLQPWIARDDE+GQKMWRVNQRIVKLIAELMRNHDSPE 
Sbjct: 938  CDIVSASPTKASAAIVLQAEKDLQPWIARDDEQGQKMWRVNQRIVKLIAELMRNHDSPEA 997

Query: 363  XXXXXXXXXXXXXXTDGMLVDGEACTLPQLELLEVTARAIHLIVEWGDPGVAVADGLSNL 542
                          TDGMLVDGEACTLPQLELLEVTARA+HLIVEWGD GV+VADGLSNL
Sbjct: 998  LVILASASDLLLRATDGMLVDGEACTLPQLELLEVTARAVHLIVEWGDSGVSVADGLSNL 1057

Query: 543  LKCRL 557
            LKCRL
Sbjct: 1058 LKCRL 1062

>GIGAN_ARATH (Q9SQI2) GIGANTEA protein|
          Length = 1173

 Score =  263 bits (673), Expect = 2e-70
 Identities = 129/183 (70%), Positives = 149/183 (81%)
 Frame = +3

Query: 9    GGYRGSQTLLSSVISEKQELCFSVVSLLWHKLIASPETQMSAESTSAHQGWRKVVDALCD 188
            G Y G+Q LL SV++EK EL FSVVSLLWHKLIA+PE Q +AESTSA QGWR+VVDALC+
Sbjct: 889  GFYCGTQKLLRSVLAEKPELSFSVVSLLWHKLIAAPEIQPTAESTSAQQGWRQVVDALCN 948

Query: 189  VVSASPAKASTAIVLQAEKDLQPWIARDDEEGQKMWRVNQRIVKLIAELMRNHDSPEXXX 368
            VVSA+PAKA+ A+VLQAE++LQPWIA+DDEEGQKMW++NQRIVK++ ELMRNHD PE   
Sbjct: 949  VVSATPAKAAAAVVLQAERELQPWIAKDDEEGQKMWKINQRIVKVLVELMRNHDRPESLV 1008

Query: 369  XXXXXXXXXXXXTDGMLVDGEACTLPQLELLEVTARAIHLIVEWGDPGVAVADGLSNLLK 548
                        TDGMLVDGEACTLPQLELLE TARAI  ++ WG  G+AV DGLSNLLK
Sbjct: 1009 ILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQPVLAWGPSGLAVVDGLSNLLK 1068

Query: 549  CRL 557
            CRL
Sbjct: 1069 CRL 1071

>Y459_RICPR (Q9ZD84) Hypothetical protein RP459|
          Length = 226

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = -2

Query: 186 HKGHLQPFSNLDELMYFLQTSAFQEXXXXXXXXXXXXRSIIPVFLR*QNLGESESLDNPH 7
           H  H+ PF + D +   L  + F E             + I +    +N+GES +L++ H
Sbjct: 125 HSPHISPFIHFDHVPMLLLHAGFSEVIVDYENIALKFENPIVLMKEIKNIGESNALNSQH 184

Query: 6   FY 1
            Y
Sbjct: 185 NY 186

>JAG1A_BRARE (Q90Y57) Jagged-1a precursor (Jagged1a) (Jagged1)|
          Length = 1242

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 22/59 (37%), Positives = 25/59 (42%)
 Frame = +2

Query: 131 CRKYISSSRLEKGCRCPL*CCFSLTSQGFNCYCSAG*EGPTALDCSR*RGRSKDVESQP 307
           C    +SS L   C     C   +T  GF C C  G EGPT   CS+    S D   QP
Sbjct: 743 CNIAKNSSCLPNPCENGATCV--VTGDGFTCVCKEGWEGPT---CSQ---NSNDCNPQP 793

>GA2L1_HUMAN (Q99501) GAS2-like protein 1 (Growth arrest-specific 2-like 1)|
           (GAS2-related protein on chromosome 22) (GAR22 protein)
          Length = 681

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = -1

Query: 541 RFERPSATATPGSPHSTMR*IALAVTSRSS-N*GKVQASP-----STSIPSVARSRRSEA 380
           R ERPS   T G+P S  R  AL   SR   + G+ + +P       S+PS AR  RS++
Sbjct: 379 RRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQS 438

>KRAF1_CAEEL (Q07292) Raf homolog serine/threonine-protein kinase (EC 2.7.11.1)|
           (Abnormal cell lineage protein 45)
          Length = 813

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 538 FERPSATATPGSPH-STMR*IALAVTSRSSN*GKVQASPSTSIPSVARSRRSEAL 377
           F++ SA+ TP SPH  + R I+L   + SS   K QASP  S  +    + S++L
Sbjct: 6   FKKSSASTTPTSPHCPSPRLISLPRCASSSIDRKDQASPMASPSTPLYPKHSDSL 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,439,243
Number of Sequences: 219361
Number of extensions: 1196181
Number of successful extensions: 3574
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3574
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)