ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags26b13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF411229.2| Hordeum vulgare gigantea-like protein mRNA, partial cds Length = 2900 Score = 1106 bits (558), Expect = 0.0 Identities = 558/558 (100%) Strand = Plus / Plus Query: 2 tagaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaaca 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1719 tagaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaaca 1778 Query: 62 ggaattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1779 ggaattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaac 1838 Query: 122 gcagatgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgccct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1839 gcagatgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgccct 1898 Query: 182 ttgtgatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctga 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1899 ttgtgatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctga 1958 Query: 242 gaaggacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1959 gaaggacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagt 2018 Query: 302 caaccagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2019 caaccagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagc 2078 Query: 362 attgataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2079 attgataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgt 2138 Query: 422 tgatggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctat 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2139 tgatggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctat 2198 Query: 482 tcatctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatct 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2199 tcatctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatct 2258 Query: 542 gttaaagtgccgtctatc 559 |||||||||||||||||| Sbjct: 2259 gttaaagtgccgtctatc 2276
>gb|AY740523.1| Hordeum vulgare gigantea-like protein (GI) mRNA, complete cds Length = 3480 Score = 1106 bits (558), Expect = 0.0 Identities = 558/558 (100%) Strand = Plus / Plus Query: 2 tagaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaaca 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2616 tagaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaaca 2675 Query: 62 ggaattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2676 ggaattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaac 2735 Query: 122 gcagatgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgccct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2736 gcagatgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgccct 2795 Query: 182 ttgtgatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctga 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2796 ttgtgatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctga 2855 Query: 242 gaaggacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2856 gaaggacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagt 2915 Query: 302 caaccagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2916 caaccagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagc 2975 Query: 362 attgataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2976 attgataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgt 3035 Query: 422 tgatggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctat 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3036 tgatggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctat 3095 Query: 482 tcatctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatct 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3096 tcatctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatct 3155 Query: 542 gttaaagtgccgtctatc 559 |||||||||||||||||| Sbjct: 3156 gttaaagtgccgtctatc 3173
>gb|AF543844.1| Triticum aestivum gigantea (TaGI1) mRNA, complete cds Length = 4012 Score = 1043 bits (526), Expect = 0.0 Identities = 547/554 (98%) Strand = Plus / Plus Query: 6 aatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaacaggaa 65 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2817 aatggcggttatcgaggctctcagactctcctaagatctgttatctcagaaaaacaggaa 2876 Query: 66 ttatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgcag 125 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2877 ctaagcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgcag 2936 Query: 126 atgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgccctttgt 185 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2937 atgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgctctttgt 2996 Query: 186 gatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgagaag 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2997 gatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgagaag 3056 Query: 246 gacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagtcaac 305 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 3057 gacctacagccctggattgctcgagatgatgaggaaggtcagaagatgtggagagtcaac 3116 Query: 306 cagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcattg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3117 cagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcattg 3176 Query: 366 ataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgat 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3177 ataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgat 3236 Query: 426 ggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattcat 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3237 ggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattcat 3296 Query: 486 ctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgtta 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3297 ctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgtta 3356 Query: 546 aagtgccgtctatc 559 |||||||||||||| Sbjct: 3357 aagtgccgtctatc 3370
>gb|AY679115.1| Triticum aestivum gigantea 3 (TaGI3) mRNA, complete cds Length = 3548 Score = 1035 bits (522), Expect = 0.0 Identities = 546/554 (98%) Strand = Plus / Plus Query: 6 aatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaacaggaa 65 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2659 aatggcggttatcgaggctctcagactctcctaagatctgttatctcagaaaaacaggaa 2718 Query: 66 ttatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgcag 125 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2719 ctatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgcag 2778 Query: 126 atgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgccctttgt 185 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2779 atgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgctctttgt 2838 Query: 186 gatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgagaag 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2839 gatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgagaag 2898 Query: 246 gacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagtcaac 305 |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2899 gacctacagctctggattgctcgagatgacgaggaaggtcagaagatgtggagagtcaac 2958 Query: 306 cagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcattg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2959 cagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcattg 3018 Query: 366 ataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgat 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 3019 ataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgtcgac 3078 Query: 426 ggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattcat 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3079 ggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattcat 3138 Query: 486 ctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgtta 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3139 ctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgtta 3198 Query: 546 aagtgccgtctatc 559 |||||||||||||| Sbjct: 3199 aagtgccgtctatc 3212
>gb|AY679114.1| Triticum aestivum gigantea 2 (TaGI2) mRNA, complete cds Length = 3543 Score = 1019 bits (514), Expect = 0.0 Identities = 544/554 (98%) Strand = Plus / Plus Query: 6 aatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaacaggaa 65 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 2653 aatgggggttatcgaggctctcagactctcctacgatctgttatctcagaaaaacaggaa 2712 Query: 66 ttatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgcag 125 ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| Sbjct: 2713 ctatgcttctctgttgtctcgttgctccggcataagcttattgcatctcccgaaacgcag 2772 Query: 126 atgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgccctttgt 185 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2773 atgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgcactttgt 2832 Query: 186 gatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgagaag 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2833 gatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgagaag 2892 Query: 246 gacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagtcaac 305 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 2893 gacctacagccctggattgctcgagatgatgaggaaggtcagaagatgtggagagtcaac 2952 Query: 306 cagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcattg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2953 cagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcattg 3012 Query: 366 ataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgat 425 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3013 ataattcttgctagtgcttcagaccttctgctccgtgctacagatgggatgcttgttgat 3072 Query: 426 ggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattcat 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3073 ggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattcat 3132 Query: 486 ctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgtta 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3133 ctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgtta 3192 Query: 546 aagtgccgtctatc 559 |||||||||||||| Sbjct: 3193 aagtgccgtctatc 3206
>gb|AF469490.1| Triticum aestivum gigantea-like protein mRNA, partial cds Length = 573 Score = 938 bits (473), Expect = 0.0 Identities = 488/493 (98%) Strand = Plus / Plus Query: 67 tatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgcaga 126 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 11 tatgcttctctgttgtctcgttgctctggcataagcttattgcatctcccgaaacgcaga 70 Query: 127 tgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgccctttgtg 186 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 71 tgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgcactttgtg 130 Query: 187 atgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgagaagg 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 atgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgagaagg 190 Query: 247 acctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagtcaacc 306 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 191 acctacagccctggattgctcgagatgatgaggaaggtcagaagatgtggagagtcaacc 250 Query: 307 agcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcattga 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 agcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcattga 310 Query: 367 taattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatg 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 taattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatg 370 Query: 427 gtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattcatc 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 gtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattcatc 430 Query: 487 tcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgttaa 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 tcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgttaa 490 Query: 547 agtgccgtctatc 559 ||||||||||||| Sbjct: 491 agtgccgtctatc 503
>ref|XM_550413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4184 Score = 603 bits (304), Expect = e-169 Identities = 493/556 (88%) Strand = Plus / Plus Query: 4 gaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaacagg 63 ||||||||||||| |||| ||||| ||||||||||| ||||| | ||||| || |||| Sbjct: 3070 gaaatgggggttacagaggttctcaaactctcctaagatctgtactgtcagagaagcagg 3129 Query: 64 aattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgc 123 | ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| || Sbjct: 3130 agctatgcttctctgttgtctcattgctctggcagaagctcattgcatctcccgaaatgc 3189 Query: 124 agatgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgcccttt 183 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 3190 agatgtctgcagaaagtacatcagctcatcagggttggagaaaggttgtggatgcgcttt 3249 Query: 184 gtgatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgaga 243 |||| |||||||||||||||| ||||||||||| ||||||| ||||||||||| |||| Sbjct: 3250 gtgacattgtttcagcctcaccgaccaaggcttcagctgctatcgttctgcaggccgaga 3309 Query: 244 aggacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagtca 303 ||||| | ||||||||||||||||||||||| ||| ||||||| |||||||||||||||| Sbjct: 3310 aggacttgcagccctggattgctcgagatgatgagcaaggtcagaagatgtggagagtca 3369 Query: 304 accagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcat 363 |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 3370 accagcgaatagttaagctgatagcagagcttatgaggaaccacgatagcccagaagcat 3429 Query: 364 tgataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttg 423 || | || ||||||||||||||||| ||||| ||||| || || ||||| |||||||||| Sbjct: 3430 tggtgatccttgctagtgcttcagatcttcttcttcgagcaactgatggaatgcttgttg 3489 Query: 424 atggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattc 483 |||||||||||||||| || || || |||||||| |||||||||| || ||||| | | Sbjct: 3490 atggtgaagcttgtactttaccacaattagagctattggaagtaaccgccagagcagtcc 3549 Query: 484 atctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgt 543 |||||||||| ||||||||||| |||||||| | || |||||||||||||| |||||| Sbjct: 3550 atctcatcgtcgaatggggagattcaggtgtatccgtcgctgatggcctctccaatctgc 3609 Query: 544 taaagtgccgtctatc 559 | |||||||||||||| Sbjct: 3610 tgaagtgccgtctatc 3625
>emb|AJ133787.1|OSA133787 Oryza sativa mRNA for gigantea homologue, partial Length = 2931 Score = 603 bits (304), Expect = e-169 Identities = 493/556 (88%) Strand = Plus / Plus Query: 4 gaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaacagg 63 ||||||||||||| |||| ||||| ||||||||||| ||||| | ||||| || |||| Sbjct: 2081 gaaatgggggttacagaggttctcaaactctcctaagatctgtactgtcagagaagcagg 2140 Query: 64 aattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgc 123 | ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| || Sbjct: 2141 agctatgcttctctgttgtctcattgctctggcagaagctcattgcatctcccgaaatgc 2200 Query: 124 agatgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgcccttt 183 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 2201 agatgtctgcagaaagtacatcagctcatcagggttggagaaaggttgtggatgcgcttt 2260 Query: 184 gtgatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgaga 243 |||| |||||||||||||||| ||||||||||| ||||||| ||||||||||| |||| Sbjct: 2261 gtgacattgtttcagcctcaccgaccaaggcttcagctgctatcgttctgcaggccgaga 2320 Query: 244 aggacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagtca 303 ||||| | ||||||||||||||||||||||| ||| ||||||| |||||||||||||||| Sbjct: 2321 aggacttgcagccctggattgctcgagatgatgagcaaggtcagaagatgtggagagtca 2380 Query: 304 accagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcat 363 |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 2381 accagcgaatagttaagctgatagcagagcttatgaggaaccacgatagcccagaagcat 2440 Query: 364 tgataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttg 423 || | || ||||||||||||||||| ||||| ||||| || || ||||| |||||||||| Sbjct: 2441 tggtgatccttgctagtgcttcagatcttcttcttcgagcaactgatggaatgcttgttg 2500 Query: 424 atggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattc 483 |||||||||||||||| || || || |||||||| |||||||||| || ||||| | | Sbjct: 2501 atggtgaagcttgtactttaccacaattagagctattggaagtaaccgccagagcagtcc 2560 Query: 484 atctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgt 543 |||||||||| ||||||||||| |||||||| | || |||||||||||||| |||||| Sbjct: 2561 atctcatcgtcgaatggggagattcaggtgtatccgtcgctgatggcctctccaatctgc 2620 Query: 544 taaagtgccgtctatc 559 | |||||||||||||| Sbjct: 2621 tgaagtgccgtctatc 2636
>dbj|AK100147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014E02, full insert sequence Length = 3682 Score = 603 bits (304), Expect = e-169 Identities = 493/556 (88%) Strand = Plus / Plus Query: 4 gaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaacagg 63 ||||||||||||| |||| ||||| ||||||||||| ||||| | ||||| || |||| Sbjct: 3051 gaaatgggggttacagaggttctcaaactctcctaagatctgtactgtcagagaagcagg 3110 Query: 64 aattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgc 123 | ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| || Sbjct: 3111 agctatgcttctctgttgtctcattgctctggcagaagctcattgcatctcccgaaatgc 3170 Query: 124 agatgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgcccttt 183 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 3171 agatgtctgcagaaagtacatcagctcatcagggttggagaaaggttgtggatgcgcttt 3230 Query: 184 gtgatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgaga 243 |||| |||||||||||||||| ||||||||||| ||||||| ||||||||||| |||| Sbjct: 3231 gtgacattgtttcagcctcaccgaccaaggcttcagctgctatcgttctgcaggccgaga 3290 Query: 244 aggacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagtca 303 ||||| | ||||||||||||||||||||||| ||| ||||||| |||||||||||||||| Sbjct: 3291 aggacttgcagccctggattgctcgagatgatgagcaaggtcagaagatgtggagagtca 3350 Query: 304 accagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcat 363 |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 3351 accagcgaatagttaagctgatagcagagcttatgaggaaccacgatagcccagaagcat 3410 Query: 364 tgataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttg 423 || | || ||||||||||||||||| ||||| ||||| || || ||||| |||||||||| Sbjct: 3411 tggtgatccttgctagtgcttcagatcttcttcttcgagcaactgatggaatgcttgttg 3470 Query: 424 atggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattc 483 |||||||||||||||| || || || |||||||| |||||||||| || ||||| | | Sbjct: 3471 atggtgaagcttgtactttaccacaattagagctattggaagtaaccgccagagcagtcc 3530 Query: 484 atctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgt 543 |||||||||| ||||||||||| |||||||| | || |||||||||||||| |||||| Sbjct: 3531 atctcatcgtcgaatggggagattcaggtgtatccgtcgctgatggcctctccaatctgc 3590 Query: 544 taaagtgccgtctatc 559 | |||||||||||||| Sbjct: 3591 tgaagtgccgtctatc 3606
>dbj|AK072166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134K20, full insert sequence Length = 4252 Score = 603 bits (304), Expect = e-169 Identities = 493/556 (88%) Strand = Plus / Plus Query: 4 gaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaacagg 63 ||||||||||||| |||| ||||| ||||||||||| ||||| | ||||| || |||| Sbjct: 3039 gaaatgggggttacagaggttctcaaactctcctaagatctgtactgtcagagaagcagg 3098 Query: 64 aattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgc 123 | ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| || Sbjct: 3099 agctatgcttctctgttgtctcattgctctggcagaagctcattgcatctcccgaaatgc 3158 Query: 124 agatgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgcccttt 183 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 3159 agatgtctgcagaaagtacatcagctcatcagggttggagaaaggttgtggatgcgcttt 3218 Query: 184 gtgatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgaga 243 |||| |||||||||||||||| ||||||||||| ||||||| ||||||||||| |||| Sbjct: 3219 gtgacattgtttcagcctcaccgaccaaggcttcagctgctatcgttctgcaggccgaga 3278 Query: 244 aggacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagtca 303 ||||| | ||||||||||||||||||||||| ||| ||||||| |||||||||||||||| Sbjct: 3279 aggacttgcagccctggattgctcgagatgatgagcaaggtcagaagatgtggagagtca 3338 Query: 304 accagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcat 363 |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 3339 accagcgaatagttaagctgatagcagagcttatgaggaaccacgatagcccagaagcat 3398 Query: 364 tgataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttg 423 || | || ||||||||||||||||| ||||| ||||| || || ||||| |||||||||| Sbjct: 3399 tggtgatccttgctagtgcttcagatcttcttcttcgagcaactgatggaatgcttgttg 3458 Query: 424 atggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattc 483 |||||||||||||||| || || || |||||||| |||||||||| || ||||| | | Sbjct: 3459 atggtgaagcttgtactttaccacaattagagctattggaagtaaccgccagagcagtcc 3518 Query: 484 atctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgt 543 |||||||||| ||||||||||| |||||||| | || |||||||||||||| |||||| Sbjct: 3519 atctcatcgtcgaatggggagattcaggtgtatccgtcgctgatggcctctccaatctgc 3578 Query: 544 taaagtgccgtctatc 559 | |||||||||||||| Sbjct: 3579 tgaagtgccgtctatc 3594
>dbj|AK067038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I22, full insert sequence Length = 4185 Score = 595 bits (300), Expect = e-167 Identities = 492/556 (88%) Strand = Plus / Plus Query: 4 gaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaacagg 63 ||||||||||||| |||| ||||| ||||||||||| ||||| | ||||| || |||| Sbjct: 3070 gaaatgggggttacagaggttctcaaactctcctaagatctgtactgtcagagaagcagg 3129 Query: 64 aattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgc 123 | ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| || Sbjct: 3130 agctatgcttctctgttgtctcattgctctggcagaagctcattgcatctcccgaaatgc 3189 Query: 124 agatgtctgcagaaagtacatcagctcatcaaggttggagaaaggttgtagatgcccttt 183 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 3190 agatgtctgcagaaagtacatcagctcatcagggttggagaaaggttgtggatgcgcttt 3249 Query: 184 gtgatgttgtttcagcctcaccagccaaggcttcaactgctattgttctgcaggctgaga 243 |||| |||||||||||||||| ||||||||||| ||||||| ||||||||||| |||| Sbjct: 3250 gtgacattgtttcagcctcaccgaccaaggcttcagctgctatcgttctgcaggccgaga 3309 Query: 244 aggacctacagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagtca 303 ||||| | ||||||||||||||||||||||| ||| ||||||| |||||||||||||||| Sbjct: 3310 aggacttgcagccctggattgctcgagatgatgagcaaggtcagaagatgtggagagtca 3369 Query: 304 accagcgaatagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcat 363 ||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 3370 accagcggatagttaagctgatagcagagcttatgaggaaccacgatagcccagaagcat 3429 Query: 364 tgataattcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttg 423 || | || ||||||||||||||||| ||||| ||||| || || ||||| |||||||||| Sbjct: 3430 tggtgatccttgctagtgcttcagatcttcttcttcgagcaactgatggaatgcttgttg 3489 Query: 424 atggtgaagcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattc 483 |||||||||||||||| || || || |||||||| |||||||||| || ||||| | | Sbjct: 3490 atggtgaagcttgtactttaccacaattagagctattggaagtaaccgccagagcagtcc 3549 Query: 484 atctcatcgttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgt 543 |||||||||| ||||||||||| |||||||| | || |||||||||||||| |||||| Sbjct: 3550 atctcatcgtcgaatggggagattcaggtgtatccgtcgctgatggcctctccaatctgc 3609 Query: 544 taaagtgccgtctatc 559 | |||||||||||||| Sbjct: 3610 tgaagtgccgtctatc 3625
>gb|AY740524.1| Hordeum vulgare subsp. vulgare gigantea-like protein (GI) gene, complete cds Length = 7682 Score = 444 bits (224), Expect = e-121 Identities = 224/224 (100%) Strand = Plus / Plus Query: 232 tgcaggctgagaaggacctacagccctggattgctcgagatgacgaggaaggtcaaaaga 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6566 tgcaggctgagaaggacctacagccctggattgctcgagatgacgaggaaggtcaaaaga 6625 Query: 292 tgtggagagtcaaccagcgaatagttaaactgatagctgagcttatgaggaaccatgata 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6626 tgtggagagtcaaccagcgaatagttaaactgatagctgagcttatgaggaaccatgata 6685 Query: 352 gcccagaagcattgataattcttgctagtgcttcagaccttctgcttcgtgctacagatg 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6686 gcccagaagcattgataattcttgctagtgcttcagaccttctgcttcgtgctacagatg 6745 Query: 412 ggatgcttgttgatggtgaagcttgtaccttgcctcagttagag 455 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6746 ggatgcttgttgatggtgaagcttgtaccttgcctcagttagag 6789 Score = 333 bits (168), Expect = 4e-88 Identities = 168/168 (100%) Strand = Plus / Plus Query: 2 tagaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaaca 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6090 tagaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaaca 6149 Query: 62 ggaattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6150 ggaattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaac 6209 Query: 122 gcagatgtctgcagaaagtacatcagctcatcaaggttggagaaaggt 169 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6210 gcagatgtctgcagaaagtacatcagctcatcaaggttggagaaaggt 6257 Score = 188 bits (95), Expect = 1e-44 Identities = 95/95 (100%) Strand = Plus / Plus Query: 454 agctcctggaagtaactgctagagctattcatctcatcgttgaatggggagacccaggtg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6947 agctcctggaagtaactgctagagctattcatctcatcgttgaatggggagacccaggtg 7006 Query: 514 tagcagttgctgatggcctctcaaatctgttaaag 548 ||||||||||||||||||||||||||||||||||| Sbjct: 7007 tagcagttgctgatggcctctcaaatctgttaaag 7041 Score = 143 bits (72), Expect = 7e-31 Identities = 72/72 (100%) Strand = Plus / Plus Query: 166 aggttgtagatgccctttgtgatgttgtttcagcctcaccagccaaggcttcaactgcta 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6353 aggttgtagatgccctttgtgatgttgtttcagcctcaccagccaaggcttcaactgcta 6412 Query: 226 ttgttctgcagg 237 |||||||||||| Sbjct: 6413 ttgttctgcagg 6424
>ref|XM_550414.1| Oryza sativa (japonica cultivar-group), mRNA Length = 786 Score = 333 bits (168), Expect = 4e-88 Identities = 273/308 (88%) Strand = Plus / Plus Query: 252 cagccctggattgctcgagatgacgaggaaggtcaaaagatgtggagagtcaaccagcga 311 ||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||| Sbjct: 184 cagccctggattgctcgagatgatgagcaaggtcagaagatgtggagagtcaaccagcga 243 Query: 312 atagttaaactgatagctgagcttatgaggaaccatgatagcccagaagcattgataatt 371 |||||||| |||||||| ||||||||||||||||| |||||||||||||||||| | || Sbjct: 244 atagttaagctgatagcagagcttatgaggaaccacgatagcccagaagcattggtgatc 303 Query: 372 cttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatggtgaa 431 ||||||||||||||||| ||||| ||||| || || ||||| |||||||||||||||||| Sbjct: 304 cttgctagtgcttcagatcttcttcttcgagcaactgatggaatgcttgttgatggtgaa 363 Query: 432 gcttgtaccttgcctcagttagagctcctggaagtaactgctagagctattcatctcatc 491 |||||||| || || || |||||||| |||||||||| || ||||| | ||||||||| Sbjct: 364 gcttgtactttaccacaattagagctattggaagtaaccgccagagcagtccatctcatc 423 Query: 492 gttgaatggggagacccaggtgtagcagttgctgatggcctctcaaatctgttaaagtgc 551 || ||||||||||| |||||||| | || |||||||||||||| |||||| | |||||| Sbjct: 424 gtcgaatggggagattcaggtgtatccgtcgctgatggcctctccaatctgctgaagtgc 483 Query: 552 cgtctatc 559 |||||||| Sbjct: 484 cgtctatc 491
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 266 bits (134), Expect = 7e-68 Identities = 188/206 (91%) Strand = Plus / Minus Query: 234 caggctgagaaggacctacagccctggattgctcgagatgacgaggaaggtcaaaagatg 293 ||||| ||||||||| | ||||||||||||||||||||||| ||| ||||||| |||||| Sbjct: 4329554 caggccgagaaggacttgcagccctggattgctcgagatgatgagcaaggtcagaagatg 4329495 Query: 294 tggagagtcaaccagcgaatagttaaactgatagctgagcttatgaggaaccatgatagc 353 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 4329494 tggagagtcaaccagcgaatagttaagctgatagcagagcttatgaggaaccacgatagc 4329435 Query: 354 ccagaagcattgataattcttgctagtgcttcagaccttctgcttcgtgctacagatggg 413 |||||||||||| | || ||||||||||||||||| ||||| ||||| || || ||||| Sbjct: 4329434 ccagaagcattggtgatccttgctagtgcttcagatcttcttcttcgagcaactgatgga 4329375 Query: 414 atgcttgttgatggtgaagcttgtac 439 |||||||||||||||||||||||||| Sbjct: 4329374 atgcttgttgatggtgaagcttgtac 4329349 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Minus Query: 4 gaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaacagg 63 ||||||||||||| |||| ||||| ||||||||||| ||||| | ||||| || |||| Sbjct: 4330088 gaaatgggggttacagaggttctcaaactctcctaagatctgtactgtcagagaagcagg 4330029 Query: 64 aattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgc 123 | ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| || Sbjct: 4330028 agctatgcttctctgttgtctcattgctctggcagaagctcattgcatctcccgaaatgc 4329969 Query: 124 agatgtctgcagaaagtacatcagctcatcaaggttggagaaaggt 169 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4329968 agatgtctgcagaaagtacatcagctcatcagggttggagaaaggt 4329923 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 166 aggttgtagatgccctttgtgatgttgtttcagcctcaccagccaaggcttcaactgcta 225 ||||||| ||||| |||||||| |||||||||||||||| ||||||||||| |||||| Sbjct: 4329822 aggttgtggatgcgctttgtgacattgtttcagcctcaccgaccaaggcttcagctgcta 4329763 Query: 226 ttgttctgcagg 237 | |||||||||| Sbjct: 4329762 tcgttctgcagg 4329751 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 460 tggaagtaactgctagagctattcatctcatcgttgaatggggagacccaggtgtagcag 519 |||||||||| || ||||| | ||||||||||| ||||||||||| |||||||| | | Sbjct: 4329211 tggaagtaaccgccagagcagtccatctcatcgtcgaatggggagattcaggtgtatccg 4329152 Query: 520 ttgctgatggcctctcaaatctg 542 | |||||||||||||| |||||| Sbjct: 4329151 tcgctgatggcctctccaatctg 4329129
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 266 bits (134), Expect = 7e-68 Identities = 188/206 (91%) Strand = Plus / Minus Query: 234 caggctgagaaggacctacagccctggattgctcgagatgacgaggaaggtcaaaagatg 293 ||||| ||||||||| | ||||||||||||||||||||||| ||| ||||||| |||||| Sbjct: 109324 caggccgagaaggacttgcagccctggattgctcgagatgatgagcaaggtcagaagatg 109265 Query: 294 tggagagtcaaccagcgaatagttaaactgatagctgagcttatgaggaaccatgatagc 353 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 109264 tggagagtcaaccagcgaatagttaagctgatagcagagcttatgaggaaccacgatagc 109205 Query: 354 ccagaagcattgataattcttgctagtgcttcagaccttctgcttcgtgctacagatggg 413 |||||||||||| | || ||||||||||||||||| ||||| ||||| || || ||||| Sbjct: 109204 ccagaagcattggtgatccttgctagtgcttcagatcttcttcttcgagcaactgatgga 109145 Query: 414 atgcttgttgatggtgaagcttgtac 439 |||||||||||||||||||||||||| Sbjct: 109144 atgcttgttgatggtgaagcttgtac 109119 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Minus Query: 4 gaaatgggggttatcgaggctctcagactctcctaagttctgttatctcagaaaaacagg 63 ||||||||||||| |||| ||||| ||||||||||| ||||| | ||||| || |||| Sbjct: 109858 gaaatgggggttacagaggttctcaaactctcctaagatctgtactgtcagagaagcagg 109799 Query: 64 aattatgcttctctgttgtctcattgctctggcataagcttattgcatctcctgaaacgc 123 | ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| || Sbjct: 109798 agctatgcttctctgttgtctcattgctctggcagaagctcattgcatctcccgaaatgc 109739 Query: 124 agatgtctgcagaaagtacatcagctcatcaaggttggagaaaggt 169 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 109738 agatgtctgcagaaagtacatcagctcatcagggttggagaaaggt 109693 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 166 aggttgtagatgccctttgtgatgttgtttcagcctcaccagccaaggcttcaactgcta 225 ||||||| ||||| |||||||| |||||||||||||||| ||||||||||| |||||| Sbjct: 109592 aggttgtggatgcgctttgtgacattgtttcagcctcaccgaccaaggcttcagctgcta 109533 Query: 226 ttgttctgcagg 237 | |||||||||| Sbjct: 109532 tcgttctgcagg 109521 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 460 tggaagtaactgctagagctattcatctcatcgttgaatggggagacccaggtgtagcag 519 |||||||||| || ||||| | ||||||||||| ||||||||||| |||||||| | | Sbjct: 108981 tggaagtaaccgccagagcagtccatctcatcgtcgaatggggagattcaggtgtatccg 108922 Query: 520 ttgctgatggcctctcaaatctg 542 | |||||||||||||| |||||| Sbjct: 108921 tcgctgatggcctctccaatctg 108899
>gb|AY365039.1| Zea mays gigantea protein-like gene, partial sequence Length = 762 Score = 198 bits (100), Expect = 1e-47 Identities = 184/212 (86%) Strand = Plus / Plus Query: 233 gcaggctgagaaggacctacagccctggattgctcgagatgacgaggaaggtcaaaagat 292 |||||| ||||||||| | ||||| ||||||||| |||||||||| ||||||| ||||| Sbjct: 514 gcaggccgagaaggacttgcagccttggattgctagagatgacgaacaaggtcagaagat 573 Query: 293 gtggagagtcaaccagcgaatagttaaactgatagctgagcttatgaggaaccatgatag 352 |||||||||||||||||| ||||| || || |||||||||||||||||||||||||| || Sbjct: 574 gtggagagtcaaccagcgtatagtgaagcttatagctgagcttatgaggaaccatgacag 633 Query: 353 cccagaagcattgataattcttgctagtgcttcagaccttctgcttcgtgctacagatgg 412 ||| ||||| ||| | || || |||||||| || ||| |||| ||||||||||| ||||| Sbjct: 634 ccctgaagcgttggtgatactcgctagtgcctccgactttctacttcgtgctaccgatgg 693 Query: 413 gatgcttgttgatggtgaagcttgtaccttgc 444 ||||| || ||||||||||||||||| |||| Sbjct: 694 aatgctcgtcgatggtgaagcttgtactttgc 725 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 77 tgttgtctcattgctctggcataagcttattgcatctcctgaaacgcagatgtctgcaga 136 ||||||||||||||||||||| ||||| || || |||||||||| ||||||||||||||| Sbjct: 17 tgttgtctcattgctctggcagaagctcatagcttctcctgaaatgcagatgtctgcaga 76 Query: 137 aagtacatcagctcatcaaggttggagaaaggt 169 ||||||||||||||| ||||| ||||| ||||| Sbjct: 77 aagtacatcagctcaccaaggatggaggaaggt 109 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 166 aggttgtagatgccctttgtgatgttgtttcagcctcaccagccaaggcttcaactgcta 225 ||||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||| |||||| Sbjct: 209 aggttgttgatgcactttgtgatgtcgtttcagcctcaccaaccaaggcatcagctgcta 268 Query: 226 ttgttctgcagg 237 | ||||| |||| Sbjct: 269 tcgttctccagg 280
>gb|AC148397.13| Medicago truncatula clone mth2-22h4, complete sequence Length = 131213 Score = 101 bits (51), Expect = 2e-18 Identities = 132/159 (83%) Strand = Plus / Minus Query: 281 aggtcaaaagatgtggagagtcaaccagcgaatagttaaactgatagctgagcttatgag 340 |||||| |||||||||||| |||| ||||| || |||||| |||||| || |||||||| Sbjct: 98845 aggtcagaagatgtggagaatcaatcagcggatcgttaaattgatagtggaacttatgag 98786 Query: 341 gaaccatgatagcccagaagcattgataattcttgctagtgcttcagaccttctgcttcg 400 ||| |||||||| | || ||||| ||||||| || ||||| ||||| | || || || Sbjct: 98785 gaatcatgatagtgcggagtcattggtaattctggcaagtgcatcagatttacttctacg 98726 Query: 401 tgctacagatgggatgcttgttgatggtgaagcttgtac 439 || ||||||||||||||||||||||| ||||||||||| Sbjct: 98725 agccacagatgggatgcttgttgatggagaagcttgtac 98687
>ref|NM_102124.2| Arabidopsis thaliana GI (GIGANTEA) AT1G22770 (GI) mRNA, complete cds Length = 4136 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 369 attcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatggt 428 ||||| || ||||| ||||| ||||| || || || || ||||| |||||||||||||| Sbjct: 3370 attctcgcaagtgcatcagatcttcttctgcgggcaactgatggaatgcttgttgatgga 3429 Query: 429 gaagcttgtaccttgcctca 448 ||||||||||| || ||||| Sbjct: 3430 gaagcttgtacattacctca 3449
>gb|AY682088.1| Arabidopsis thaliana GIGANTEA gene, complete cds Length = 5068 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 369 attcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatggt 428 ||||| || ||||| ||||| ||||| || || || || ||||| |||||||||||||| Sbjct: 4365 attctcgcaagtgcatcagatcttcttctgcgggcaactgatggaatgcttgttgatgga 4424 Query: 429 gaagcttgtaccttgcctca 448 ||||||||||| || ||||| Sbjct: 4425 gaagcttgtacattacctca 4444
>emb|Y12227.1|ATY12227 Arabidopsis thaliana DNA, 24 kb surrounding PFL locus Length = 24053 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 369 attcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatggt 428 ||||| || ||||| ||||| ||||| || || || || ||||| |||||||||||||| Sbjct: 19822 attctcgcaagtgcatcagatcttcttctgcgggcaactgatggaatgcttgttgatgga 19881 Query: 429 gaagcttgtaccttgcctca 448 ||||||||||| || ||||| Sbjct: 19882 gaagcttgtacattacctca 19901
>emb|AJ133786.1|ATH133786 Arabidopsis thaliana mRNA for gigantea protein Length = 3522 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 369 attcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatggt 428 ||||| || ||||| ||||| ||||| || || || || ||||| |||||||||||||| Sbjct: 3025 attctcgcaagtgcatcagatcttcttctgcgggcaactgatggaatgcttgttgatgga 3084 Query: 429 gaagcttgtaccttgcctca 448 ||||||||||| || ||||| Sbjct: 3085 gaagcttgtacattacctca 3104
>gb|AY685132.1| Arabidopsis thaliana ecotype WS gigantea gene, complete cds Length = 6149 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 369 attcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatggt 428 ||||| || ||||| ||||| ||||| || || || || ||||| |||||||||||||| Sbjct: 4616 attctcgcaagtgcatcagatcttcttctgcgggcaactgatggaatgcttgttgatgga 4675 Query: 429 gaagcttgtaccttgcctca 448 ||||||||||| || ||||| Sbjct: 4676 gaagcttgtacattacctca 4695
>gb|AY685131.1| Arabidopsis thaliana ecotype Cvi gigantea gene, complete cds Length = 6114 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 369 attcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatggt 428 ||||| || ||||| ||||| ||||| || || || || ||||| |||||||||||||| Sbjct: 4581 attctcgcaagtgcatcagatcttcttctgcgggcaactgatggaatgcttgttgatgga 4640 Query: 429 gaagcttgtaccttgcctca 448 ||||||||||| || ||||| Sbjct: 4641 gaagcttgtacattacctca 4660
>gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC T22J18 sequence, complete sequence Length = 84162 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 369 attcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatggt 428 ||||| || ||||| ||||| ||||| || || || || ||||| |||||||||||||| Sbjct: 12548 attctcgcaagtgcatcagatcttcttctgcgggcaactgatggaatgcttgttgatgga 12489 Query: 429 gaagcttgtaccttgcctca 448 ||||||||||| || ||||| Sbjct: 12488 gaagcttgtacattacctca 12469
>gb|AF105064.1|AF105064 Arabidopsis thaliana GIGANTEA (GI) mRNA, complete cds Length = 4001 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 369 attcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatggt 428 ||||| || ||||| ||||| ||||| || || || || ||||| |||||||||||||| Sbjct: 3235 attctcgcaagtgcatcagatcttcttctgcgggcaactgatggaatgcttgttgatgga 3294 Query: 429 gaagcttgtaccttgcctca 448 ||||||||||| || ||||| Sbjct: 3295 gaagcttgtacattacctca 3314
>gb|AF076686.1|AF076686 Arabidopsis thaliana GIGANTEA (GI) gene, complete cds Length = 5138 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 369 attcttgctagtgcttcagaccttctgcttcgtgctacagatgggatgcttgttgatggt 428 ||||| || ||||| ||||| ||||| || || || || ||||| |||||||||||||| Sbjct: 4372 attctcgcaagtgcatcagatcttcttctgcgggcaactgatggaatgcttgttgatgga 4431 Query: 429 gaagcttgtaccttgcctca 448 ||||||||||| || ||||| Sbjct: 4432 gaagcttgtacattacctca 4451
>gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH020D15, complete sequence Length = 143633 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 408 gatgggatgcttgttgatggtgaagcttgtaccttgcctca 448 ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 124961 gatggaatgcttgttgatggagaagcttgtacattacctca 124921
>gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 map 3, complete sequence Length = 191014 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 506 cccaggtgtagcagttgctgatggcct 532 |||||||| |||||||||||||||||| Sbjct: 155114 cccaggtggagcagttgctgatggcct 155088
>gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosome 3, complete sequence Length = 210014 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 506 cccaggtgtagcagttgctgatggcct 532 |||||||| |||||||||||||||||| Sbjct: 183482 cccaggtggagcagttgctgatggcct 183456
>gb|AC146037.1| Pan troglodytes BAC clone RP43-44A5 from 7, complete sequence Length = 177637 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tatctcagaaaaacaggaatta 68 |||||||||||||||||||||| Sbjct: 117850 tatctcagaaaaacaggaatta 117871
>gb|AC149286.4| Pan troglodytes BAC clone CH251-514L10 from chromosome 7, complete sequence Length = 180713 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 tatctcagaaaaacaggaatta 68 |||||||||||||||||||||| Sbjct: 108055 tatctcagaaaaacaggaatta 108034
>gb|AC005988.1|AC005988 Homo sapiens chromosome 17, clone hRPK.299_G_24, complete sequence Length = 173126 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 tattgttctgcaggctgagaag 245 |||||||||||||||||||||| Sbjct: 18202 tattgttctgcaggctgagaag 18181
>ref|NM_126539.2| Arabidopsis thaliana unknown protein AT2G05090 mRNA, complete cds Length = 1719 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 tgaagcttgtaccttgcctca 448 ||||||||||||||||||||| Sbjct: 1064 tgaagcttgtaccttgcctca 1044
>emb|X04669.1|XLACTCAG Xenopus laevis cardiac actin gene Length = 8908 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 gtgatgttgtttcagcctcac 204 ||||||||||||||||||||| Sbjct: 6171 gtgatgttgtttcagcctcac 6191
>gb|AC093880.4| Homo sapiens BAC clone RP11-651C2 from 4, complete sequence Length = 169968 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 agctcatcaaggttggagaaa 166 ||||||||||||||||||||| Sbjct: 23733 agctcatcaaggttggagaaa 23753
>emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 in linkage group 10, complete sequence Length = 139250 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 387 gaccttctgcttcgtgctacagatg 411 |||||||||||| |||||||||||| Sbjct: 2420 gaccttctgcttggtgctacagatg 2396
>gb|AC073834.6| Homo sapiens BAC clone RP11-250N10 from 2, complete sequence Length = 172415 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 attgttctgcaggctgagaag 245 ||||||||||||||||||||| Sbjct: 50281 attgttctgcaggctgagaag 50261
>ref|NM_123067.1| Arabidopsis thaliana unknown protein AT5G37080 mRNA, complete cds Length = 1701 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 tgaagcttgtaccttgcctc 447 |||||||||||||||||||| Sbjct: 1064 tgaagcttgtaccttgcctc 1045
>gb|AC134426.20| Mus musculus chromosome 1, clone RP24-342A12, complete sequence Length = 196208 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 143468 tgttgtctcattgctctggc 143449
>gb|AC131129.4| Rattus norvegicus 17 BAC CH230-15O20 (Children's Hospital Oakland Research Institute) complete sequence Length = 232401 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 176681 tgttgtctcattgctctggc 176700
>gb|AC112739.5| Rattus norvegicus 7 BAC CH230-108A12 (Children's Hospital Oakland Research Institute) complete sequence Length = 234420 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cagcctcaccagccaaggct 215 |||||||||||||||||||| Sbjct: 115272 cagcctcaccagccaaggct 115291
>gb|AC119905.11| Mus musculus chromosome 17, clone RP24-238N14, complete sequence Length = 179042 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 aggtcaaaagatgtggagag 300 |||||||||||||||||||| Sbjct: 8245 aggtcaaaagatgtggagag 8226
>gb|AC183673.2| Pan troglodytes BAC clone CH251-540O10 from chromosome 1, complete sequence Length = 185717 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 136397 agttgctgatggcctcgcaaatct 136374
>gb|AC164562.4| Mus musculus BAC clone RP23-148G12 from chromosome 3, complete sequence Length = 202591 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 gttagagctcctggaagtaa 468 |||||||||||||||||||| Sbjct: 93761 gttagagctcctggaagtaa 93742
>gb|AC129191.4| Mus musculus BAC clone RP24-81F10 from chromosome Y, complete sequence Length = 241616 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 97624 tgttgtctcattgctctggc 97643
>emb|CT010448.4| Mouse DNA sequence from clone RP23-290P4 on chromosome 17, complete sequence Length = 136671 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 76083 tgttgtctcattgctctggc 76102
>gb|AC140441.3| Mus musculus BAC clone RP23-82A21 from chromosome 5, complete sequence Length = 177052 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 122793 tgttgtctcattgctctggc 122774
>ref|XM_538358.2| PREDICTED: Canis familiaris similar to CG9581-PA (LOC481237), mRNA Length = 1657 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 atcagctcatcaaggttggagaaa 166 ||||||||||||||| |||||||| Sbjct: 956 atcagctcatcaaggatggagaaa 979
>emb|CR384088.10| Zebrafish DNA sequence from clone CH211-107K4 in linkage group 15, complete sequence Length = 156313 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ttctgttatctcagaaaaac 60 |||||||||||||||||||| Sbjct: 38070 ttctgttatctcagaaaaac 38089
>gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, complete sequence Length = 154037 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 39121 agttgctgatggcctcgcaaatct 39098 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 30617 agttgctgatggcctcgcaaatct 30594
>emb|AL163218.2|HS21C018 Homo sapiens chromosome 21 segment HS21C018 Length = 340000 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 174571 agttgctgatggcctcgcaaatct 174548
>emb|AL590785.7| Human DNA sequence from clone RP11-321C1 on chromosome 6, complete sequence Length = 188159 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 35157 agttgctgatggcctcgcaaatct 35134
>emb|AL392086.14| Human DNA sequence from clone RP11-799O21 on chromosome 10 Contains the 3' end of a novel gene and a novel gene, complete sequence Length = 220225 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 34067 agttgctgatggcctcgcaaatct 34044
>emb|AL357127.17| Human DNA sequence from clone RP11-282I1 on chromosome 10 Contains the 3' end of a novel gene and a novel gene, complete sequence Length = 124343 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tgtttcagcctcaccagcca 210 |||||||||||||||||||| Sbjct: 113419 tgtttcagcctcaccagcca 113438
>emb|AL353807.18| Human DNA sequence from clone RP11-29H23 on chromosome 1 Contains the 5' end of the ASH1L gene for ash1 (absent, small, or homeotic)-like (Drosophila), two novel genes, a pseudogene similar to part of death associated protein 3 (DAP3), the gene for a novel protein (FLJ10504), the 3' end of a novel pseudogene and a CpG island, complete sequence Length = 179064 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 158314 agttgctgatggcctcgcaaatct 158291
>gb|AC087354.13| Homo sapiens chromosome 8, clone RP11-398H6, complete sequence Length = 184610 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 152025 agttgctgatggcctcgcaaatct 152002
>emb|AL137789.11| Human DNA sequence from clone RP11-57I17 on chromosome 1q32.1-32.3 Contains the 3' end of the CR1 gene for complement component (3b/4b) receptor 1, including Knops blood group system, a membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) (MCP) pseudogene and the 5' end of the CR1L gene for complement component (3b/4b) receptor 1-like, complete sequence Length = 145325 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 64458 agttgctgatggcctcgcaaatct 64435
>emb|AL121985.13|HSA404F10 Human DNA sequence from clone RP11-404F10 on chromosome 1q23.1-24.1 Contains the 5' end of the SLAMF1 gene for signaling lymphocytic activation molecule family member 1, a SET translocation (myeloid leukemia-associated) (SET) pseudogene, a novel gene, the CD48 gene for CD48 antigen (B-cell membrane protein), the SLAMF7 gene for SLAM family member 7 and the 5' end of the LY9 gene for lymphocyte antigen 9, complete sequence Length = 195976 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 86116 agttgctgatggcctcgcaaatct 86139
>emb|Y18890.1|HER18890 Human endogenous retrovirus type K (HERV-K), gag, pol and env genes Length = 9234 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8060 agttgctgatggcctcgcaaatct 8083
>emb|Y17832.2|HEN17832 Human endogenous retrovirus K (HERV-K) elements, clone C7 Length = 10029 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8724 agttgctgatggcctcgcaaatct 8747
>emb|Y17834.1|HEN17834 Human endogenous retrovirus K (HERV-K) elements, clone SD-C7-34LTR Length = 8300 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 7218 agttgctgatggcctcgcaaatct 7241
>emb|Y17833.1|HEN17833 Human endogenous retrovirus K (HERV-K) elements, clone gP23-C19 Length = 8807 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 7428 agttgctgatggcctcgcaaatct 7451
>emb|AL592382.1|PCWO3G5 Pneumocystis carinii telomeric cosmid, WO3G5 Length = 33547 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 attcttgctagtgcttcaga 388 |||||||||||||||||||| Sbjct: 1135 attcttgctagtgcttcaga 1154
>emb|CR854856.5| Human DNA sequence from clone RP13-299H21 on chromosome 1, complete sequence Length = 186712 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 308 agttgctgatggcctcacaaatct 331
>gb|AC084198.31| Homo sapiens 3 BAC RP11-454H13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194955 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 102687 agttgctgatggcctcgcaaatct 102710
>gb|AC154750.2| Mus musculus BAC clone RP24-399I16 from chromosome 17, complete sequence Length = 128778 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 aggtcaaaagatgtggagag 300 |||||||||||||||||||| Sbjct: 109494 aggtcaaaagatgtggagag 109475
>gb|AC119675.2| Homo sapiens chromosome 1 clone RP4-731G4, complete sequence Length = 138939 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 124064 agttgctgatggcctcacaaatct 124041
>gb|AC011467.7| Homo sapiens chromosome 19 clone CTC-457E21, complete sequence Length = 187888 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||| ||||||||||||||| Sbjct: 105843 agttgctgctggcctctcaaatct 105820
>gb|AC010508.8| Homo sapiens chromosome 19 clone LLNLF-185G6, complete sequence Length = 20540 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 5207 agttgctgatggcctcgcaaatct 5230
>gb|AC090093.7| Homo sapiens chromosome 8, clone RP11-656A10, complete sequence Length = 167115 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 86429 agttgctgatggcctcgcaaatct 86406
>gb|AC092133.2| Homo sapiens chromosome 16 clone RP11-20D16, complete sequence Length = 156351 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 133142 agttgctgatggcctcgcaaatct 133119
>gb|AF490464.1| Homo sapiens HERV-K' long terminal repeat, complete sequence; and envelope glycoprotein gene, partial cds Length = 8708 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8535 agttgctgatggcctcgcaaatct 8558
>gb|AC112702.3| Homo sapiens chromosome 19 clone CTB-151G24, complete sequence Length = 45995 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 19850 agttgctgatggcctcgcaaatct 19827
>gb|AC116309.2| Homo sapiens chromosome 5 clone RP11-106J9, complete sequence Length = 176112 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 115288 agttgctgatggcctcgcaaatct 115265
>gb|AF074086.2| Homo sapiens tandemly repeated human endogenous retrovirus HERV-K (HML-2.HOM), complete sequence Length = 19221 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 16802 agttgctgatggcctcgcaaatct 16825 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8298 agttgctgatggcctcgcaaatct 8321
>gb|AC093156.2| Homo sapiens chromosome 1 clone RP11-87O11, complete sequence Length = 198846 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 160780 agttgctgatggcctcgcaaatct 160757
>gb|AC025757.3| Homo sapiens chromosome 5 clone CTD-2195H9, complete sequence Length = 135862 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 4830 agttgctgatggcctcgcaaatct 4807
>gb|AF333072.2|AF333072 Homo sapiens HERV-K18.1 5' long terminal repeat, complete sequence; gag protein (gag) gene, gag-K18.1 allele, complete cds; pol protein (pol) gene, pol-K18.1 allele, complete cds; env protein (env) gene, env-K18.1 allele, complete cds; and 3' long terminal repeat, complete sequence Length = 9234 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8060 agttgctgatggcctcgcaaatct 8083
>gb|AC019205.4| Homo sapiens BAC clone RP11-398K22 from 6, complete sequence Length = 198052 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 110194 agttgctgatggcctcgcaaatct 110217
>gb|DQ360809.1| Human endogenous retrovirus K clone 2.2 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 418 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 374 agttgctgatggcctcgcaaatct 397
>gb|DQ360807.1| Human endogenous retrovirus K clone 6.5 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 419 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360806.1| Human endogenous retrovirus K clone 6.4 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 414 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360805.1| Human endogenous retrovirus K clone 6.1 envelope glycoprotein (env) gene, partial cds Length = 419 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360799.1| Human endogenous retrovirus K clone 4.3 envelope glycoprotein (env) gene, partial cds Length = 419 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360798.1| Human endogenous retrovirus K clone 4.2 envelope glycoprotein (env) gene, partial cds Length = 419 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360797.1| Human endogenous retrovirus K clone 4.4 envelope glycoprotein (env) gene, partial cds Length = 419 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360796.1| Human endogenous retrovirus K clone 4.5 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 419 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360795.1| Human endogenous retrovirus K clone 3.1 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 419 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360794.1| Human endogenous retrovirus K clone 3.4 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 419 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360793.1| Human endogenous retrovirus K clone 3.3 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 419 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360792.1| Human endogenous retrovirus K clone 3.2 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 419 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360791.1| Human endogenous retrovirus K clone 2.4 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 414 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360790.1| Human endogenous retrovirus K clone 2.5 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 414 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360789.1| Human endogenous retrovirus K clone 2.6 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 415 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 371 agttgctgatggcctcgcaaatct 394
>gb|DQ360788.1| Human endogenous retrovirus K clone 1.8 envelope glycoprotein (env) gene, partial cds Length = 419 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360787.1| Human endogenous retrovirus K clone 1.5 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 414 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>gb|DQ360785.1| Human endogenous retrovirus K clone 1.3 nonfunctional envelope glycoprotein (env) gene, partial sequence Length = 414 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 375 agttgctgatggcctcgcaaatct 398
>ref|XM_701539.1| PREDICTED: Danio rerio similar to Tripartite motif protein 3 (RING finger protein 22) (RING finger protein HAC1), transcript variant 6 (LOC555391), mRNA Length = 2247 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 accttctgcttcgtgctacagatg 411 ||||||||||| |||||||||||| Sbjct: 710 accttctgcttggtgctacagatg 687
>ref|XM_701538.1| PREDICTED: Danio rerio similar to Tripartite motif protein 3 (RING finger protein 22) (RING finger protein HAC1), transcript variant 5 (LOC555391), mRNA Length = 2214 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 accttctgcttcgtgctacagatg 411 ||||||||||| |||||||||||| Sbjct: 677 accttctgcttggtgctacagatg 654
>ref|XM_701536.1| PREDICTED: Danio rerio similar to Tripartite motif protein 3 (RING finger protein 22) (RING finger protein HAC1), transcript variant 3 (LOC555391), mRNA Length = 2265 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 accttctgcttcgtgctacagatg 411 ||||||||||| |||||||||||| Sbjct: 710 accttctgcttggtgctacagatg 687
>ref|XM_701535.1| PREDICTED: Danio rerio similar to Tripartite motif protein 3 (RING finger protein 22) (RING finger protein HAC1), transcript variant 2 (LOC555391), mRNA Length = 2301 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 accttctgcttcgtgctacagatg 411 ||||||||||| |||||||||||| Sbjct: 710 accttctgcttggtgctacagatg 687
>ref|XM_677589.1| PREDICTED: Danio rerio similar to Tripartite motif protein 3 (RING finger protein 22) (RING finger protein HAC1), transcript variant 1 (LOC555391), mRNA Length = 2307 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 accttctgcttcgtgctacagatg 411 ||||||||||| |||||||||||| Sbjct: 710 accttctgcttggtgctacagatg 687
>gb|AY037929.1| Human endogenous retrovirus K115 complete genome Length = 9463 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8289 agttgctgatggcctcgcaaatct 8312
>gb|AY037928.1| Human endogenous retrovirus K113 complete genome Length = 9472 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8298 agttgctgatggcctcgcaaatct 8321
>gb|AF333073.1|AF333073 Homo sapiens HERV-K18.3 env protein (env) gene, complete cds; and 3' long terminal repeat, complete sequence Length = 2713 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 1515 agttgctgatggcctcgcaaatct 1538
>gb|AF333069.1|AF333069 Homo sapiens HERV-K18.2 env protein (env) gene, complete cds Length = 1683 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 1515 agttgctgatggcctcgcaaatct 1538
>gb|AF012336.2|AF012336 Homo sapiens HERV-K18 truncated envelope protein (env) gene, env-K18.1 allele, complete cds Length = 2713 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 1515 agttgctgatggcctcgcaaatct 1538
>gb|AC158672.6| Mus musculus 6 BAC RP23-64J23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216954 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 179396 tgttgtctcattgctctggc 179377
>gb|DQ058015.1| Homo sapiens endogenous virus MERV env type 2 gene, partial cds Length = 2129 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 1853 agttgctgatggcctcgcaaatct 1876
>gb|DQ058016.1| Homo sapiens endogenous virus MERV env type 1 gene, partial cds Length = 1837 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 1561 agttgctgatggcctcgcaaatct 1584
>gb|AC134684.5| Homo sapiens chromosome 8, clone RP11-1118M6, complete sequence Length = 175202 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 57124 agttgctgatggcctcgcaaatct 57101
>gb|AC007326.28| Homo sapiens chromosome 22 clone p423 map 22q11, complete sequence Length = 102898 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 44879 agttgctgatggcctcgcaaatct 44902
>gb|AC153965.4| Mus musculus 10 BAC RP24-377E21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166350 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 119767 tgttgtctcattgctctggc 119786
>gb|AC135776.3| Homo sapiens chromosome 16 clone CTD-2144E22, complete sequence Length = 168546 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 108719 agttgctgatggcctcgcaaatct 108696
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ggaaccatgatagcccagaa 359 |||||||||||||||||||| Sbjct: 1129492 ggaaccatgatagcccagaa 1129473
>gb|AC018809.5| Homo sapiens chromosome 3 clone RP11-1020A11 map 3p, complete sequence Length = 216911 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 130236 agttgctgatggcctcacaaatct 130259
>gb|AC009158.7| Homo sapiens chromosome 16 clone RP11-67I10, complete sequence Length = 161248 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ttgttctgcaggctgagaag 245 |||||||||||||||||||| Sbjct: 74445 ttgttctgcaggctgagaag 74464
>gb|AC092903.11| Homo sapiens 3 BAC RP11-666A20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161141 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 144351 agttgctgatggcctcgcaaatct 144328
>gb|AC138135.2| Homo sapiens chromosome 1 clone RP11-128G13, complete sequence Length = 111000 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 agcagttgctgatggcctct 534 |||||||||||||||||||| Sbjct: 40662 agcagttgctgatggcctct 40643
>gb|AC025420.26| Homo sapiens 12 BAC RP11-491C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 94145 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 45441 agttgctgatggcctcgcaaatct 45464
>gb|AC130367.12| Homo sapiens chromosome 8, clone RP11-1322A13, complete sequence Length = 188884 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 18959 agttgctgatggcctcgcaaatct 18982
>gb|AC016577.4|AC016577 Homo sapiens chromosome 5 clone CTB-69E10, complete sequence Length = 77654 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 22105 agttgctgatggcctcgcaaatct 22082
>emb|AL929215.18| Mouse DNA sequence from clone RP23-8L8 on chromosome 2, complete sequence Length = 159804 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 90001 tgttgtctcattgctctggc 90020
>gb|AF240627.1|AF240627 Homo sapiens chromosome 21 map 21q21 clone B650K3, complete sequence Length = 170770 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 76741 agttgctgatggcctcgcaaatct 76718
>emb|X82272.1|HERVENV Human endogenous retrovirus env mRNA Length = 3366 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 2284 agttgctgatggcctcgcaaatct 2307
>dbj|AB047240.1| Human endogenous retrovirus HERV-K(II) DNA, complete sequence and flanking region Length = 11122 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8947 agttgctgatggcctcgcaaatct 8970
>dbj|AB047209.1| Human endogenous retrovirus HERV-K(I) DNA, complete sequence and flanking region Length = 11138 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 9133 agttgctgatggcctcgcaaatct 9156
>emb|CR854858.22| Human DNA sequence from clone RP13-177J6 on chromosome 1, complete sequence Length = 168039 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 158774 agttgctgatggcctcacaaatct 158797
>gb|AC157017.3| Mus musculus 10 BAC RP24-559D16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 170093 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 21646 tgttgtctcattgctctggc 21665
>gb|AC155848.6| Mus musculus 6 BAC RP24-534P19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202657 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 tcctggaagtaactgctaga 476 |||||||||||||||||||| Sbjct: 117374 tcctggaagtaactgctaga 117393
>gb|AF164615.1|AF164615 Homo sapiens endogenous retrovirus HERV-K109, complete sequence Length = 9422 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8256 agttgctgatggcctcgcaaatct 8279
>gb|AF164614.1|AF164614 Homo sapiens endogenous retrovirus HERV-K108, complete sequence Length = 9472 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8298 agttgctgatggcctcgcaaatct 8321
>gb|AF164612.1|AF164612 Homo sapiens endogenous retrovirus HERV-K104 long terminal repeat, complete sequence; and Gag protein (gag) and envelope protein (env) genes, complete cds Length = 9445 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8279 agttgctgatggcctcgcaaatct 8302
>gb|AF164611.1|AF164611 Homo sapiens endogenous retrovirus HERV-K103, complete sequence Length = 9181 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8007 agttgctgatggcctcgcaaatct 8030
>gb|AF164610.1|AF164610 Homo sapiens endogenous retrovirus HERV-K102, complete sequence Length = 9178 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8005 agttgctgatggcctcgcaaatct 8028
>gb|AF164609.1|AF164609 Homo sapiens endogenous retrovirus HERV-K101, complete sequence Length = 9179 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8005 agttgctgatggcctcgcaaatct 8028
>gb|AF134984.1|AF134984 Homo sapiens IDDMK(1,2)22- and HERV-K18-related human endogenous retrovirus envelope protein gene, complete cds.; and 3'-long terminal repeat, complete sequence Length = 2547 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 1573 agttgctgatggcctcgcaaatct 1596
>dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-748H22, complete sequence Length = 191270 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 109375 agttgctgatggcctcgcaaatct 109398
>dbj|AP002954.1| Homo sapiens genomic DNA, chromosome 11q, clons:CTC-89C10, complete sequence Length = 197215 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 100602 agttgctgatggcctcgcaaatct 100579
>dbj|AP000941.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-861M13, complete sequence Length = 199321 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 197399 agttgctgatggcctcgcaaatct 197376
>emb|BX294195.4| Mouse DNA sequence from clone RP23-59F2 on chromosome X, complete sequence Length = 67271 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 62271 tgttgtctcattgctctggc 62252
>emb|AL928882.10| Mouse DNA sequence from clone RP23-281I20 on chromosome 2, complete sequence Length = 147002 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 76937 tgttgtctcattgctctggc 76956
>emb|AL929572.10| Mouse DNA sequence from clone RP23-464H12 on chromosome 2, complete sequence Length = 191603 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 7406 tgttgtctcattgctctggc 7425
>gb|M14123.1|HUMERVKA Human endogenous retrovirus HERV-K10 Length = 9179 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 8005 agttgctgatggcctcgcaaatct 8028
>emb|AL732311.13| Mouse DNA sequence from clone RP23-125H15 on chromosome 2, complete sequence Length = 209215 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 106912 tgttgtctcattgctctggc 106893
>emb|AL672184.13| Mouse DNA sequence from clone RP23-421G11 on chromosome X, complete sequence Length = 211206 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 146193 tgttgtctcattgctctggc 146212
>emb|AL109763.2|HSP10238 Homo sapiens chromosome 21 sequence from PAC RPCI-1 238P10 map 21q21 region D21S189-LA297, complete sequence Length = 131414 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 agttgctgatggcctctcaaatct 541 |||||||||||||||| ||||||| Sbjct: 102955 agttgctgatggcctcgcaaatct 102932
>emb|AL844884.5| Mouse DNA sequence from clone RP23-266B14 on chromosome 2, complete sequence Length = 150285 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tgttgtctcattgctctggc 96 |||||||||||||||||||| Sbjct: 10437 tgttgtctcattgctctggc 10456 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,903,006 Number of Sequences: 3902068 Number of extensions: 4903006 Number of successful extensions: 99008 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98711 Number of HSP's gapped (non-prelim): 296 length of query: 559 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 536 effective length of database: 17,143,297,704 effective search space: 9188807569344 effective search space used: 9188807569344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
