>TSL1_YEAST (P38427) Trehalose synthase complex regulatory subunit TSL1|
           (Alpha,alpha-trehalose-phosphate synthase [UDP-forming]
           123 kDa subunit)
          Length = 1098

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 31  DTFKGSYYANPILDVPTTDDVLVSRYPSYCRPNIWPADH 147
           D+ K  Y + P+L   T DD   + Y +YC+  +WP  H
Sbjct: 399 DSLKDKYDSYPVL---TDDDTFKAAYKNYCKQILWPTLH 434

>Y6508_BACAN (Q6F059) Hypothetical protein pXO2-09/BXB0008/GBAA_pXO2_0008|
          Length = 644

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 133 WPADHLPELEIAFKALGKLMLEVGLMLARHCDL 231
           +P +H P LE  +K L  L LE G    RH DL
Sbjct: 391 YPPNHYPILEDFYKYLSNLKLEAGATPQRHRDL 423

>KV3T_MOUSE (P01672) Ig kappa chain V-III region PC 7940|
          Length = 111

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 479 PAALSGQGTSTEFFINRPHVSPVKDPWSVCHPHHDETESPPSF 351
           PA  SG G+ T+F +N   + PV++  +V +      E PP+F
Sbjct: 63  PARFSGSGSGTDFTLN---IHPVEEEDAVTYYCQHSRELPPTF 102

>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
 Frame = +1

Query: 178 LGKLMLEVGLMLARHCDLYVMQHGVGQYDGESLEQTISR---SRCHKGRLLYYFPRQFSA 348
           L  ++ E  L+ AR   L +         G +LE+ + R       KGR++    ++ +A
Sbjct: 372 LANVVNEAALLTARENGLVIT--------GPALEEAVDRVIGGPRRKGRIISEQEKKITA 423

Query: 349 QKEGGDSVSSWCGWHTDH-GSLTGLTCGLFMKNSVEVPCPDSAAGLYIRTRDNRVVKVTF 525
             EGG ++++W     +    +T L  G    ++V VP  D      +RTR   + ++ F
Sbjct: 424 YHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDKG----LRTRSEMIAQLVF 479

Query: 526 -----GEEELAYQ 549
                  EEL ++
Sbjct: 480 AMGGRAAEELVFR 492

>MBHL_RHOCA (P15284) Uptake hydrogenase large subunit (EC 1.12.99.6)|
           (Hydrogenlyase) (Membrane-bound hydrogenase large
           subunit)
          Length = 597

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 4   KEKLESGKLDTFKGSYYANPILDVPTTDDVLVSRY 108
           K+ +ESG+L  FK  Y+ NP   +P   D++ + +
Sbjct: 171 KKFVESGQLGLFKNGYWDNPAYKLPPEADLMATTH 205


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,950,477
Number of Sequences: 219361
Number of extensions: 1902385
Number of successful extensions: 4503
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4502
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)