Clone Information

BLAST Search Result

Clone Name	bags25l24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	POF11_SCHPO (Q09855) F-box/WD-repeat protein pof11	37	0.020
2	SNE_ARATH (Q9LUB6) F-box protein SNE (Protein SNEEZY) (Sleepy pr...	37	0.026
3	GID2_ARATH (Q9STX3) F-box protein GID2 (Protein SLEEPY1)	37	0.034
4	FBW12_HUMAN (Q6X9E4) F-box/WD-repeat protein 12 (F-box and WD-40...	36	0.044
5	FBXW5_MOUSE (Q9QXW2) F-box/WD-repeat protein 5 (F-box and WD-40 ...	36	0.058
6	JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylatio...	35	0.099
7	FBX8_HUMAN (Q9NRD0) F-box only protein 8 (F-box/SEC7 protein FBS)	35	0.099
8	FBXW5_HUMAN (Q969U6) F-box/WD-repeat protein 5 (F-box and WD-40 ...	35	0.13
9	JHD1B_XENLA (Q640I9) JmjC domain-containing histone demethylatio...	35	0.13
10	POF10_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding...	34	0.17
11	AP2B_HUMAN (Q92481) Transcription factor AP-2 beta (AP2-beta) (A...	34	0.17
12	AP2B_CANFA (Q76HI7) Transcription factor AP-2 beta (AP2-beta) (A...	34	0.17
13	FBSP1_MOUSE (Q8K3B1) F-box/SPRY-domain protein 1 (F-box only pro...	34	0.17
14	FBX8_MOUSE (Q9QZN3) F-box only protein 8	34	0.17
15	AP2B_MOUSE (Q61313) Transcription factor AP-2 beta (AP2-beta) (A...	34	0.17
16	YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7	34	0.22
17	JHD1B_HUMAN (Q8NHM5) JmjC domain-containing histone demethylatio...	34	0.22
18	FBXL5_MOUSE (Q8C2S5) F-box/LRR-repeat protein 5 (F-box and leuci...	34	0.22
19	FBX3_HUMAN (Q9UK99) F-box only protein 3	34	0.22
20	FBX24_HUMAN (O75426) F-box only protein 24	33	0.29
21	JHD1A_MOUSE (P59997) JmjC domain-containing histone demethylatio...	33	0.29
22	FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	33	0.37
23	FBX18_HUMAN (Q8NFZ0) F-box only protein 18 (EC 3.6.1.-) (F-box D...	33	0.37
24	FBX24_MOUSE (Q9D417) F-box only protein 24	33	0.49
25	TRCB_XENLA (Q91854) Beta-TrCP (Beta-transducin repeat-containing...	33	0.49
26	FBW1A_HUMAN (Q9Y297) F-box/WD-repeat protein 1A (F-box and WD-re...	33	0.49
27	FBX18_MOUSE (Q8K2I9) F-box only protein 18 (EC 3.6.1.-) (F-box D...	33	0.49
28	FBX11_RAT (Q7TSL3) F-box only protein 11	33	0.49
29	FBX11_HUMAN (Q86XK2) F-box only protein 11 (Vitiligo-associated ...	33	0.49
30	JHD1A_HUMAN (Q9Y2K7) JmjC domain-containing histone demethylatio...	32	0.64
31	FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	32	0.64
32	FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 ...	32	0.64
33	GID2_ORYSA (Q7XAK4) F-box protein GID2 (Gibberellin-insensitive ...	32	0.64
34	JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation...	32	0.64
35	FBXL5_HUMAN (Q9UKA1) F-box/LRR-repeat protein 5 (F-box and leuci...	32	0.64
36	FBX10_HUMAN (Q9UK96) F-box only protein 10	32	0.83
37	STM_BRAOL (Q9M6D9) Homeobox protein Shootmeristemless	32	0.83
38	FBX9_HUMAN (Q9UK97) F-box only protein 9 (NY-REN-57 antigen) (Cr...	32	0.83
39	FBX3_MOUSE (Q9DC63) F-box only protein 3	32	0.83
40	JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylatio...	32	1.1
41	FBSP1_CAEEL (Q18223) F-box/SPRY-domain protein 1 (F-box synaptic...	32	1.1
42	FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leuci...	31	1.4
43	POF3_SCHPO (O74991) F-box/TPR-repeat protein pof3	31	1.4
44	FBX9_RAT (Q5U2X1) F-box only protein 9	31	1.4
45	FBX9_MOUSE (Q8BK06) F-box only protein 9	31	1.9
46	FBX31_HUMAN (Q5XUX0) F-box only protein 31	31	1.9
47	SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box p...	30	2.4
48	FBX15_MACFA (Q9GKV7) F-box only protein 15	30	3.2
49	ADO2_ARATH (Q8W420) Adagio protein 2 (LOV kelch protein 2) (Flav...	30	3.2
50	WRK19_ARATH (Q9SZ67) Probable WRKY transcription factor 19 (WRKY...	30	4.1
51	FBX15_HUMAN (Q8NCQ5) F-box only protein 15	30	4.1
52	FBW1B_HUMAN (Q9UKB1) F-box/WD-repeat protein 11 (F-box/WD-repeat...	30	4.1
53	FBXL8_MOUSE (Q8CIG9) F-box/LRR-repeat protein 8 (F-box and leuci...	30	4.1
54	FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leuc...	29	5.4
55	SCONB_EMENI (Q00659) Sulfur metabolite repression control protein	29	5.4
56	TIR1_ARATH (Q570C0) TRANSPORT INHIBITOR RESPONSE 1 protein (F-bo...	29	5.4
57	FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leuc...	29	7.1
58	FXL19_MOUSE (Q6PB97) F-box/LRR-repeat protein 19 (F-box and leuc...	28	9.2
59	DGKA_RAT (P51556) Diacylglycerol kinase alpha (EC 2.7.1.107) (Di...	28	9.2
60	COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Co...	28	9.2
61	SKP2_MOUSE (Q9Z0Z3) S-phase kinase-associated protein 2 (F-box p...	28	9.2
62	RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC ...	28	9.2
63	POLG_MVEV5 (P05769) Genome polyprotein [Contains: Capsid protein...	28	9.2
64	PIP1_YEAST (P40020) Polymerase-interacting protein 1 (Factor int...	28	9.2

>POF11_SCHPO (Q09855) F-box/WD-repeat protein pof11|
          Length = 506

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 144 FPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRK 278
           FP EV   VF  LD  DL  C L+ ++W  + +D   WK +  +K
Sbjct: 76  FPEEVSLRVFSYLDQLDLCKCKLMSKRWKRLLEDPGIWKALYMQK 120

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>SNE_ARATH (Q9LUB6) F-box protein SNE (Protein SNEEZY) (Sleepy protein 2)|
          Length = 157

 Score = 37.0 bits (84), Expect = 0.026
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 153 EVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRK 278
           +VL  +   LDG  L     VCR W  +A++D  W+ +C R+
Sbjct: 33  DVLVEILRRLDGSSLCSAACVCRLWSAVARNDSIWEELCFRQ 74

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>GID2_ARATH (Q9STX3) F-box protein GID2 (Protein SLEEPY1)|
          Length = 151

 Score = 36.6 bits (83), Expect = 0.034
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 153 EVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSI 290
           EVLK V    D K L     V + W + A+D+  W+ IC+R W +I
Sbjct: 42  EVLKHV----DAKTLAMSSCVSKIWHKTAQDERLWELICTRHWTNI 83

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>FBW12_HUMAN (Q6X9E4) F-box/WD-repeat protein 12 (F-box and WD-40 domain protein|
           12) (F-box only protein 35)
          Length = 464

 Score = 36.2 bits (82), Expect = 0.044
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 132 MENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKW 281
           ME   P   LK +F  LD   L+    V + W  IA  DY W+ +  ++W
Sbjct: 1   MEIRLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRW 50

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>FBXW5_MOUSE (Q9QXW2) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein|
           5)
          Length = 573

 Score = 35.8 bits (81), Expect = 0.058
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWK 260
           P  ++  +F  L   D++   LVCRQW  +++D++ WK
Sbjct: 10  PDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWK 47

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>JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10) (F-box protein FBL10)
          Length = 1309

 Score = 35.0 bits (79), Expect = 0.099
 Identities = 19/46 (41%), Positives = 21/46 (45%)
 Frame = +3

Query: 153  EVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSI 290
            EV  AVF  L  +DL  CM VCR W     D   W  I   +  SI
Sbjct: 1041 EVWMAVFSYLSHRDLCVCMRVCRTWNRWCCDKRLWTRIDLNRCKSI 1086

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>FBX8_HUMAN (Q9NRD0) F-box only protein 8 (F-box/SEC7 protein FBS)|
          Length = 319

 Score = 35.0 bits (79), Expect = 0.099
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSIC---KQPPSDTN 317
           P E+   +   L+  DL  C+  C  W ++A D+  W+ +C   W       K PP   +
Sbjct: 75  PPELSFTILSYLNATDL--CLASC-VWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFS 131

Query: 318 XQKLYL 335
            +KLY+
Sbjct: 132 FRKLYM 137

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>FBXW5_HUMAN (Q969U6) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein|
           5)
          Length = 566

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWK 260
           P  ++  +F  L   D++   LVCRQW  +++D++ W+
Sbjct: 10  PDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWR 47

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>JHD1B_XENLA (Q640I9) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10)
          Length = 1259

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +3

Query: 153  EVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSI 290
            EV  A+F  L  +DL  CM +CR W     D   W  I   +  SI
Sbjct: 991  EVWMAIFSYLSHRDLCICMRICRTWNRWCCDKRLWTQIDLNRCKSI 1036

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>POF10_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding protein 2)|
          Length = 662

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWK 260
           P E+L  +F  LD + L+     C+ W ++  DD  W+
Sbjct: 35  PKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWR 72

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>AP2B_HUMAN (Q92481) Transcription factor AP-2 beta (AP2-beta) (Activating|
           enhancer-binding protein 2 beta)
          Length = 449

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 21/66 (31%), Positives = 30/66 (45%)
 Frame = -3

Query: 276 SVSRCISRSNHPLQFXTIGGIQACKRPSLYHPVEGKQP*EPHQEIHFPFSITELHQECLY 97
           SVS+    S  PL        Q    P  Y P+   Q  +P+  ++ P+S+  LHQ   +
Sbjct: 34  SVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQH 93

Query: 96  PLGCRQ 79
           P G RQ
Sbjct: 94  PWGQRQ 99

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>AP2B_CANFA (Q76HI7) Transcription factor AP-2 beta (AP2-beta) (Activating|
           enhancer-binding protein 2 beta)
          Length = 449

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 21/66 (31%), Positives = 30/66 (45%)
 Frame = -3

Query: 276 SVSRCISRSNHPLQFXTIGGIQACKRPSLYHPVEGKQP*EPHQEIHFPFSITELHQECLY 97
           SVS+    S  PL        Q    P  Y P+   Q  +P+  ++ P+S+  LHQ   +
Sbjct: 34  SVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQH 93

Query: 96  PLGCRQ 79
           P G RQ
Sbjct: 94  PWGQRQ 99

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>FBSP1_MOUSE (Q8K3B1) F-box/SPRY-domain protein 1 (F-box only protein 45)|
          Length = 286

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDD---YFWKCICSR 275
           P  VL+ VF  L+  +L  C LVC+ W      D     W+ +C+R
Sbjct: 40  PSRVLELVFSYLELSELRSCALVCKHWYRCLHGDENSEVWRSLCAR 85

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>FBX8_MOUSE (Q9QZN3) F-box only protein 8|
          Length = 319

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSIC---KQPPSDTN 317
           P E+   +   L+  DL  C+  C  W ++A D+  W+ +C   W       K PP   +
Sbjct: 75  PPELSFTILSYLNAIDL--CLASC-VWQDLANDELLWQGLCKSTWGHCSIYNKNPPLGFS 131

Query: 318 XQKLYL 335
            +KLY+
Sbjct: 132 FRKLYM 137

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>AP2B_MOUSE (Q61313) Transcription factor AP-2 beta (AP2-beta) (Activating|
           enhancer-binding protein 2 beta)
          Length = 448

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 21/66 (31%), Positives = 30/66 (45%)
 Frame = -3

Query: 276 SVSRCISRSNHPLQFXTIGGIQACKRPSLYHPVEGKQP*EPHQEIHFPFSITELHQECLY 97
           SVS+    S  PL        Q    P  Y P+   Q  +P+  ++ P+S+  LHQ   +
Sbjct: 34  SVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQH 93

Query: 96  PLGCRQ 79
           P G RQ
Sbjct: 94  PWGQRQ 99

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>YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7|
          Length = 466

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = +3

Query: 108 PGEVQ*LRMENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWK 260
           P +V    +    P EVL  VF  LD K L     VCR W  +A D   W+
Sbjct: 48  PAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQ 98

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>JHD1B_HUMAN (Q8NHM5) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10) (F-box protein FBL10)
            (Protein JEMMA) (Jumonji containing domain
            EMSY-interactor methyltr
          Length = 1336

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +3

Query: 153  EVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFW 257
            EV  AVF  L  +DL  CM VCR W     D   W
Sbjct: 1068 EVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLW 1102

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>FBXL5_MOUSE (Q8C2S5) F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat|
           protein 5)
          Length = 690

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKW 281
           P EV+ ++F  L+ ++L  C  V  +W ++AK    WK +    W
Sbjct: 209 PPEVMLSIFSYLNPQELCRCSQVSTKWSQLAKTGSLWKHLYPVHW 253

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>FBX3_HUMAN (Q9UK99) F-box only protein 3|
          Length = 471

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSICKQPPSDTNX-- 320
           P + L  +   LD +DL+ C  V R+  +++  D  W+  C + W  I ++  +  N   
Sbjct: 17  PTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKYW-LISEEEKTQKNQCW 75

Query: 321 QKLYL-TFSKPRKTV-HLPVPKLTFKDLXFYID 413
           + L++ T+S   + + H    K  + DL  Y++
Sbjct: 76  KSLFIDTYSDVGRYIDHYAAIKKAWDDLKKYLE 108

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>FBX24_HUMAN (O75426) F-box only protein 24|
          Length = 580

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 144 FPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSICKQ 299
           FP E+++ +   L  +DLV     CR + E+   +  W+ IC R  P +  Q
Sbjct: 42  FPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRICRRLSPRLQDQ 93

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>JHD1A_MOUSE (P59997) JmjC domain-containing histone demethylation protein 1A (EC|
            1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
            leucine-rich repeat protein 11)
          Length = 1161

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
 Frame = +3

Query: 135  ENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFW--------KCICSRKWPSI 290
            E+    EV  +VF  L  K+L  CM VC+ W +   D   W        K I  +    I
Sbjct: 889  ESWMQREVWMSVFRYLSRKELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGI 948

Query: 291  CKQPP-----SDTNXQKLYLTF 341
             K+ P     S TN  K  LT+
Sbjct: 949  IKRQPVSLDLSWTNISKKQLTW 970

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>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7)|
            (Protein archipelago)
          Length = 1326

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 147  PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSICKQPPSD 311
            P E+   V   L+ KDL+     CR W  +  D+  WK  C +    I  +P SD
Sbjct: 896  PRELALFVLSYLEPKDLLRAAQTCRSWRFLCDDNLLWKEKCRK--AQILAEPRSD 948

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>FBX18_HUMAN (Q8NFZ0) F-box only protein 18 (EC 3.6.1.-) (F-box DNA helicase 1)|
          Length = 1043

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCM-LVCRQWXEIAKDDYF--WKCICSR 275
           P EVL+ VF  L  +DL + + LVC  W EI  D  F  WK +  R
Sbjct: 216 PSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFIPWKKLYHR 261

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>FBX24_MOUSE (Q9D417) F-box only protein 24|
          Length = 589

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +3

Query: 144 FPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSICKQ 299
           FP E+++ +   L  KDLV     C  + E+   +  W+ IC R  P I  Q
Sbjct: 29  FPPELVEHIVSFLPVKDLVALGQTCHYFHEVCDAEGVWRRICRRLSPRIRDQ 80

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>TRCB_XENLA (Q91854) Beta-TrCP (Beta-transducin repeat-containing protein)|
          Length = 518

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 156 VLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSR 275
           + + +   LD K L    LVC++W  +  D   WK +  R
Sbjct: 121 IAENILSYLDAKSLCSAELVCKEWYRVTSDGMLWKKLIER 160

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>FBW1A_HUMAN (Q9Y297) F-box/WD-repeat protein 1A (F-box and WD-repeats protein|
           beta-TrCP) (E3RSIkappaB) (pIkappaBalpha-E3 receptor
           subunit)
          Length = 605

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 156 VLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSR 275
           + + +   LD K L    LVC++W  +  D   WK +  R
Sbjct: 192 IAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIER 231

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>FBX18_MOUSE (Q8K2I9) F-box only protein 18 (EC 3.6.1.-) (F-box DNA helicase 1)|
          Length = 1042

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCM-LVCRQWXEIAKDDYF--WKCICSR 275
           P EVL+ +F  L  +DL + + LVC  W EI  D  F  WK +  R
Sbjct: 214 PSEVLRHIFAFLPVEDLYWNLSLVCHLWREIINDPLFIPWKKLYHR 259

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>FBX11_RAT (Q7TSL3) F-box only protein 11|
          Length = 843

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 132 MENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWK 260
           ++   P EV+  +F  L  +DL     VC+++ E+A D   WK
Sbjct: 71  LQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWK 113

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>FBX11_HUMAN (Q86XK2) F-box only protein 11 (Vitiligo-associated protein VIT-1)|
          Length = 843

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 132 MENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWK 260
           ++   P EV+  +F  L  +DL     VC+++ E+A D   WK
Sbjct: 71  LQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWK 113

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>JHD1A_HUMAN (Q9Y2K7) JmjC domain-containing histone demethylation protein 1A (EC|
            1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
            leucine-rich repeat protein 11) (F-box protein FBL7)
            (F-box protein Lilina)
          Length = 1162

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
 Frame = +3

Query: 135  ENGFPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFW--------KCICSRKWPSI 290
            E+    EV  +VF  L  ++L  CM VC+ W +   D   W        K I  +    I
Sbjct: 890  ESWMQREVWMSVFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGI 949

Query: 291  CKQPP-----SDTNXQKLYLTF 341
             K+ P     S TN  K  LT+
Sbjct: 950  IKRQPVSLDLSWTNISKKQLTW 971

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>FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBW7) (F-box protein Fbxw6)
           (F-box-WD40 repeat protein 6) (SEL-10)
          Length = 629

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRK 278
           P E+   V   L+ KDL+     CR W  +A+D+  W+  C  +
Sbjct: 207 PKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEE 250

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>FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBX30) (hCdc4) (Archipelago homolog)
           (hAgo) (SEL-10)
          Length = 707

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRK 278
           P E+   V   L+ KDL+     CR W  +A+D+  W+  C  +
Sbjct: 285 PKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEE 328

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>GID2_ORYSA (Q7XAK4) F-box protein GID2 (Gibberellin-insensitive dwarf protein|
           2) (Protein GIBBERELLIN INSENSITIVE DWARF2)
          Length = 212

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 13/48 (27%)
 Frame = +3

Query: 186 GKDLVFCML-------------VCRQWXEIAKDDYFWKCICSRKWPSI 290
           G+DLVF +L             V R W ++A+D+  W+  C R+W ++
Sbjct: 77  GEDLVFEVLRRAEARTLAAAACVSRGWRQLAEDERLWEAACVREWANL 124

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>JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation protein 1 (EC|
            1.14.11.-)
          Length = 1345

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 156  VLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWK 260
            VLK +F  L    LV C  VC+ W   A D   WK
Sbjct: 1069 VLKIIFRYLPQDTLVTCCSVCKVWSNAAVDPDLWK 1103

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>FBXL5_HUMAN (Q9UKA1) F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat|
           protein 5) (F-box protein FBL4/FBL5) (p45SKP2-like
           protein)
          Length = 691

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKW 281
           P EV+ ++F  L+ ++L  C  V  +W ++ K    WK +    W
Sbjct: 209 PPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHW 253

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>FBX10_HUMAN (Q9UK96) F-box only protein 10|
          Length = 954

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 141 GFPGEVLKAVFPLLDGKDLVFCMLVCRQWXE--IAKDDYFWKCIC 269
           G P E+ + +   L   DL  C LVCR W E  ++ D   W+ +C
Sbjct: 5   GLPLELWRMILAYLHLPDLGRCSLVCRAWYELILSLDSTRWRQLC 49

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>STM_BRAOL (Q9M6D9) Homeobox protein Shootmeristemless|
          Length = 383

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = -2

Query: 292 QMEGHFREQMHFQK*SSFAISHHWRHTSMQKTKSL--PSSRGKTALRTS-------PGNP 140
           Q  GH ++  H Q+   +A   H +H+S+   +SL  PS   K  +R+S       P   
Sbjct: 39  QHHGHDQQHQHQQQHDGYAYQSHHQHSSLLFLQSLTPPSQEAKNKVRSSCSPSSGAPAYS 98

Query: 139 FSILNH 122
           F  +NH
Sbjct: 99  FMEINH 104

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>FBX9_HUMAN (Q9UK97) F-box only protein 9 (NY-REN-57 antigen) (Cross-immune|
           reaction antigen 1)
          Length = 447

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = +3

Query: 147 PGEVLKAVFPL-----LDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSICKQPPSD 311
           P EVL  +F       LD + L    LVCR +   A+D   W+  C + W   C +    
Sbjct: 192 PMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPY 251

Query: 312 TNXQKLYLTFSKPR 353
           T+ ++++L   +PR
Sbjct: 252 TSWREMFL--ERPR 263

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>FBX3_MOUSE (Q9DC63) F-box only protein 3|
          Length = 480

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKW 281
           P + L  +   +D +DL+ C  V R+  +++  D  W+  C + W
Sbjct: 17  PTDPLLLILSFVDYRDLINCCYVSRRLSQLSTHDPLWRRHCKKYW 61

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>JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylation protein 1A (EC|
            1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
            leucine-rich repeat protein 11)
          Length = 1146

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +3

Query: 153  EVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSICKQPPSD-TNXQKL 329
            +V  +VF  L  ++L  CM VC+ W +   D   W  I   +  S+  Q  S     Q +
Sbjct: 880  DVWLSVFHYLTHEELCICMRVCKAWYKWGCDKRLWSRIDVSRCKSLVPQALSGIIKRQPI 939

Query: 330  YLTFS 344
            YL  S
Sbjct: 940  YLDLS 944

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>FBSP1_CAEEL (Q18223) F-box/SPRY-domain protein 1 (F-box synaptic protein 1)|
          Length = 332

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEI--AKDDYFWKCICSRKWPSICKQPP 305
           P +VL  +F  L  KDL   ML C  W      +D   W+ +  +K P      P
Sbjct: 86  PLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMEDSDIWQYLLGKKLPEAAVSDP 140

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>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCI 266
           P   +  +F  L    L  C  VCR+W  +A D   W+ I
Sbjct: 118 PDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTI 157

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>POF3_SCHPO (O74991) F-box/TPR-repeat protein pof3|
          Length = 577

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDD 248
           P EVL  +   L+ K +V CM VC+ W +  K +
Sbjct: 140 PREVLLCILQQLNFKSIVQCMQVCKHWRDCIKKE 173

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>FBX9_RAT (Q5U2X1) F-box only protein 9|
          Length = 435

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = +3

Query: 147 PGEVLKAVFPL-----LDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSICKQPPSD 311
           P EVL  +F       LD + L    LVCR +   A+D   W+  C + W   C +    
Sbjct: 180 PMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCMKLVPF 239

Query: 312 TNXQKLYLTFSKPR 353
           ++ ++++L   +PR
Sbjct: 240 SSWREMFL--ERPR 251

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>FBX9_MOUSE (Q8BK06) F-box only protein 9|
          Length = 437

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
 Frame = +3

Query: 147 PGEVLKAVFPL-----LDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSICKQPPSD 311
           P EVL  +F       LD + L    LVCR +   A+D   W+  C + W   C +    
Sbjct: 182 PMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCMKLVPY 241

Query: 312 TNXQKLYLTFSKPR 353
            + ++++L   +PR
Sbjct: 242 ASWREMFL--ERPR 253

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>FBX31_HUMAN (Q5XUX0) F-box only protein 31|
          Length = 539

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSICKQPPSDTNXQK 326
           P E+L  +F  L G DL     VC ++  I   D  W+  C  ++  +C+      N +K
Sbjct: 71  PPELLVEIFASLPGTDLPSLAQVCTKFRRILHTDTIWRRRCREEY-GVCE------NLRK 123

Query: 327 LYLT 338
           L +T
Sbjct: 124 LEIT 127

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>SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box protein Skp2)|
           (Cyclin A/CDK2-associated protein p45) (p45skp2)
           (F-box/LRR-repeat protein 1)
          Length = 424

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 138 NGFPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCI 266
           +  P E+L  +F  L   +L+    VC++W  +A D+  W+ +
Sbjct: 98  DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL 140

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>FBX15_MACFA (Q9GKV7) F-box only protein 15|
          Length = 434

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFW 257
           P E+L  +F  LD   L+    V R++  +A D++ W
Sbjct: 2   PSEILLKIFSYLDAVSLLCAGCVSRRFYHLANDNFIW 38

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>ADO2_ARATH (Q8W420) Adagio protein 2 (LOV kelch protein 2) (Flavin-binding|
           kelch repeat F-box protein 1-like protein 1) (FKF1-like
           protein 1) (F-box only protein 2c) (FBX2c)
          Length = 611

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 192 DLVFCMLVCRQWXEIAKDDYFWKCICSRKW 281
           D+     VCR+  E+ K+D  W+ +C   W
Sbjct: 218 DIASVGCVCRRLNELTKNDDVWRMVCQNTW 247

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>WRK19_ARATH (Q9SZ67) Probable WRKY transcription factor 19 (WRKY DNA-binding|
           protein 19)
          Length = 1895

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 24/88 (27%), Positives = 37/88 (42%)
 Frame = -3

Query: 432 MIPQATCQCKTPDP*K*A*VQEDALSSVAWRMLNRAFXSLCQKEAACRWKAISVSRCISR 253
           MI Q++  C  P P   A     + S ++ ++ N +   LCQ E   +    +  RCIS 
Sbjct: 54  MISQSSSMCTVP-PGMAATPPISSGSGLSQQLNNSSSSKLCQVEGCQKGARDASGRCISH 112

Query: 252 SNHPLQFXTIGGIQACKRPSLYHPVEGK 169
                     GG + C++P      EGK
Sbjct: 113 ----------GGGRRCQKPDCQKGAEGK 130

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>FBX15_HUMAN (Q8NCQ5) F-box only protein 15|
          Length = 434

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFW 257
           P E+L  +F  LD   L+    V R++  +A D++ W
Sbjct: 2   PSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 38

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>FBW1B_HUMAN (Q9UKB1) F-box/WD-repeat protein 11 (F-box/WD-repeat protein 1B)|
           (F-box and WD-repeats protein beta-TrCP2)
          Length = 542

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = +3

Query: 156 VLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSR 275
           + + +   LD + L    LVC++W  +  +   WK +  R
Sbjct: 131 IAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIER 170

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>FBXL8_MOUSE (Q8CIG9) F-box/LRR-repeat protein 8 (F-box and leucine-rich repeat|
           protein 8) (F-box protein FBL8)
          Length = 374

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 138 NGFPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFW 257
           +  P EVL  +F  L  +DL     VCR W   A +   W
Sbjct: 6   DNLPEEVLALIFRDLPLRDLAVATRVCRAWAAAAANSTVW 45

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>FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat|
           protein 12) (F-box protein FBL12)
          Length = 326

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWK 260
           P  VL  +F  L  +D +    VC +W  +  D + W+
Sbjct: 8   PDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWR 45

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>SCONB_EMENI (Q00659) Sulfur metabolite repression control protein|
          Length = 678

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +3

Query: 147 PGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSICKQ 299
           P E+   +   LD   L     V R W  +A DD  W  +C +     CK+
Sbjct: 185 PPEIAFKILCYLDTTSLCKASQVSRGWRALADDDVVWHRMCEQHIHRKCKK 235

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>TIR1_ARATH (Q570C0) TRANSPORT INHIBITOR RESPONSE 1 protein (F-box/LRR-repeat|
           protein 1)
          Length = 594

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +3

Query: 129 RMENGFPGEVLKAVFPLLD-GKDLVFCMLVCRQWXEIAK 242
           R+   FP EVL+ VF  +   KD     LVC+ W EI +
Sbjct: 4   RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIER 42

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>FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat|
           protein 19)
          Length = 674

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 168 VFPLLDGKDLVFCMLVCRQWXEIAKDDYFW 257
           VF  L  ++L  CM VCR W     D   W
Sbjct: 412 VFQHLGPRELCICMRVCRTWSRWCYDKRLW 441

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>FXL19_MOUSE (Q6PB97) F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat|
           protein 19)
          Length = 674

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 168 VFPLLDGKDLVFCMLVCRQWXEIAKDDYFW 257
           VF  L  ++L  CM VCR W     D   W
Sbjct: 412 VFQHLGPRELCVCMRVCRTWSRWCYDKRLW 441

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>DGKA_RAT (P51556) Diacylglycerol kinase alpha (EC 2.7.1.107) (Diglyceride|
           kinase alpha) (DGK-alpha) (DAG kinase alpha) (80 kDa
           diacylglycerol kinase)
          Length = 727

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
 Frame = +3

Query: 6   FFHPLEPLQIYS---GGPPYRRFFLATP---VYILEGTGIPGEVQ*LRMENGFPGEVLKA 167
           F + L P Q+++   G  P  RFF   P   V +  G G  G +     +  FP     A
Sbjct: 390 FQYILNPRQVFNLKDGPEPGLRFFKDVPQFRVLVCGGDGTVGWILETIDKANFPIVPPVA 449

Query: 168 VFPLLDGKDLVFCMLVCRQW-----XEIAKDDYFWKCICSRKW 281
           V PL  G DL  C+   R +      +I KD    K +   +W
Sbjct: 450 VLPLGTGNDLARCLRWGRGYEGENLRKILKDIEISKVVYLDRW 492

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>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:|
            Endostatin]
          Length = 1774

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 45   GPPYRRFFLATPVYI-LEGTGIPGEVQ*LRMENGFPG 152
            GPP   F      +I +EG+G  G+++ LR   GFPG
Sbjct: 891  GPPGPSFRQDKLTFIDMEGSGFSGDIESLRGPRGFPG 927

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>SKP2_MOUSE (Q9Z0Z3) S-phase kinase-associated protein 2 (F-box protein Skp2)|
           (Cyclin A/CDK2-associated protein p45) (F-box/WD-40
           protein 1) (FWD1)
          Length = 424

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +3

Query: 138 NGFPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCI 266
           +  P E+L  +F  L   +L+    VC++W  ++ D+  W+ +
Sbjct: 98  DSLPDELLLGIFSCLCLPELLRVSGVCKRWYRLSLDESLWQSL 140

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>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC|
           1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose
           synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose
           synthase MUM4)
          Length = 667

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +1

Query: 40  PGGRLTDGSSSPRLSTS*RVQAFLV 114
           PGGRL+DGSS  +  +S  VQ F V
Sbjct: 345 PGGRLSDGSSEKKDVSSNTVQTFTV 369

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>POLG_MVEV5 (P05769) Genome polyprotein [Contains: Capsid protein C (Core|
            protein); Envelope protein M (Matrix protein); Major
            envelope protein E; Nonstructural protein 1 (NS1);
            Nonstructural protein 2A (NS2A); Flavivirin protease NS2B
            regulatory subunit;
          Length = 3434

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 23/105 (21%), Positives = 44/105 (41%)
 Frame = +3

Query: 144  FPGEVLKAVFPLLDGKDLVFCMLVCRQWXEIAKDDYFWKCICSRKWPSICKQPPSDTNXQ 323
            F  E+  + F ++DG +   C    R W     +D+ +    +R W  + ++  S+ +  
Sbjct: 917  FAAELANSTF-VVDGPETAECPNSKRAWNSFEIEDFGFGITSTRGWLKLREENTSECD-S 974

Query: 324  KLYLTFSKPRKTVHLPVPKLTFKDLXFYIDMWLEGSLIFSQAVSG 458
             +  T  K    VH         DL ++I+  L G+    +A+ G
Sbjct: 975  TIIGTAVKGNHAVH--------SDLSYWIESGLNGTWKLERAIFG 1011

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>PIP1_YEAST (P40020) Polymerase-interacting protein 1 (Factor interacting with|
           REF)
          Length = 925

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 297 QPPSDTNXQKLYLTFSKPRKTVHLPVP 377
           +PP  T  + LYLT   P    HLPVP
Sbjct: 258 RPPPLTPEKNLYLTPESPLNRYHLPVP 284


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,505,808
Number of Sequences: 219361
Number of extensions: 1436094
Number of successful extensions: 2998
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 2928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2997
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

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