ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25l20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091C16, full insert sequence Length = 1533 Score = 488 bits (246), Expect = e-135 Identities = 366/407 (89%) Strand = Plus / Plus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||||||||| |||||||| ||||||||| || ||||||| ||||||||||| ||| Sbjct: 574 gcctatggcttggaaaaacttgctactgaggaactgtgcaagcattacacaaaggatttt 633 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||| || |||||||| |||||||| ||||| ||||| || | ||| ||||||||| Sbjct: 634 ggcattgaatgtcgggttggccgctttcataatatctatggtccctttggaacatggaag 693 Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | Sbjct: 694 ggtggaagggagaaggcgcctgctgctttctgcagaaaagctctaacctccactgaccgt 753 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 754 tttgagatgtggggagatggtcttcagactagatccttcacgtttattgatgaatgtgtg 813 Query: 241 gagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatcgggagtgat 300 ||||||||||||||| | |||||||| |||||||| |||||||||||||| || |||||| Sbjct: 814 gagggtgtcctcaggttgacaaagtccgatttccgtgagcctgtaaacattggaagtgat 873 Query: 301 gaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaacaagcagctg 360 |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||||| Sbjct: 874 gaaatggtcagcatgaatgagatggctgagatagtcctcagctttgagaacaagcagctg 933 Query: 361 cccatccaccacatncctggccccgagggcgtncgtggccgtaactc 407 |||||||||||||| || || || ||||| || ||||| || ||||| Sbjct: 934 cccatccaccacatccccgggccagagggtgtccgtggtcgcaactc 980
>ref|NM_196510.1| Oryza sativa (japonica cultivar-group) putative epimerase/dehydratase (OSJNBa0061K21.15), mRNA Length = 1137 Score = 305 bits (154), Expect = 6e-80 Identities = 343/407 (84%) Strand = Plus / Plus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||| |||||||| ||||| |||||||| | ||||||||||||| ||||||||| Sbjct: 520 gcctatggtttggagaagcttgcaactgaggagctctgcaagcactacaccaaggacttt 579 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||||||||| ||||| ||||| ||||| ||||||||||| | ||| |||||||| Sbjct: 580 ggcattgagtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaa 639 Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||| | ||||||||||| ||||| |||||||| ||||||| || ||||||||| || Sbjct: 640 ggtggccgtgagaaggcaccagctgcattctgcaggaaggctcagacttccactgacagg 699 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 |||||||||||||| ||||| || ||||| | ||||||||||| || ||||| ||||| Sbjct: 700 tttgagatgtggggtgatggcctccagacccggtccttcacattcatagatgagtgtgtt 759 Query: 241 gagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatcgggagtgat 300 |||||||| || ||| | |||||||| || ||||| ||||| || ||||| || || ||| Sbjct: 760 gagggtgttctgaggttgacaaagtcggacttccgtgagccagtgaacattggaagcgat 819 Query: 301 gaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaacaagcagctg 360 |||||||| |||||||||||||||||||| || | || |||||||| | | | ||||| Sbjct: 820 gaaatggtaagcatgaacgagatggctgaaatcattctcagcttcgaggatagggagctg 879 Query: 361 cccatccaccacatncctggccccgagggcgtncgtggccgtaactc 407 |||||||||||||| ||||| |||||||| || |||||||||||||| Sbjct: 880 cccatccaccacatccctggacccgagggtgtccgtggccgtaactc 926
>dbj|AB193582.1| Oryza sativa (japonica cultivar-group) OsGME-1 mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1212 Score = 305 bits (154), Expect = 6e-80 Identities = 343/407 (84%) Strand = Plus / Plus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||| |||||||| ||||| |||||||| | ||||||||||||| ||||||||| Sbjct: 556 gcctatggtttggagaagcttgcaactgaggagctctgcaagcactacaccaaggacttt 615 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||||||||| ||||| ||||| ||||| ||||||||||| | ||| |||||||| Sbjct: 616 ggcattgagtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaa 675 Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||| | ||||||||||| ||||| |||||||| ||||||| || ||||||||| || Sbjct: 676 ggtggccgtgagaaggcaccagctgcattctgcaggaaggctcagacttccactgacagg 735 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 |||||||||||||| ||||| || ||||| | ||||||||||| || ||||| ||||| Sbjct: 736 tttgagatgtggggtgatggcctccagacccggtccttcacattcatagatgagtgtgtt 795 Query: 241 gagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatcgggagtgat 300 |||||||| || ||| | |||||||| || ||||| ||||| || ||||| || || ||| Sbjct: 796 gagggtgttctgaggttgacaaagtcggacttccgtgagccagtgaacattggaagcgat 855 Query: 301 gaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaacaagcagctg 360 |||||||| |||||||||||||||||||| || | || |||||||| | | | ||||| Sbjct: 856 gaaatggtaagcatgaacgagatggctgaaatcattctcagcttcgaggatagggagctg 915 Query: 361 cccatccaccacatncctggccccgagggcgtncgtggccgtaactc 407 |||||||||||||| ||||| |||||||| || |||||||||||||| Sbjct: 916 cccatccaccacatccctggacccgagggtgtccgtggccgtaactc 962
>dbj|AK104822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-B04, full insert sequence Length = 1587 Score = 305 bits (154), Expect = 6e-80 Identities = 343/407 (84%) Strand = Plus / Plus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||| |||||||| ||||| |||||||| | ||||||||||||| ||||||||| Sbjct: 641 gcctatggtttggagaagcttgcaactgaggagctctgcaagcactacaccaaggacttt 700 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||||||||| ||||| ||||| ||||| ||||||||||| | ||| |||||||| Sbjct: 701 ggcattgagtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaa 760 Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||| | ||||||||||| ||||| |||||||| ||||||| || ||||||||| || Sbjct: 761 ggtggccgtgagaaggcaccagctgcattctgcaggaaggctcagacttccactgacagg 820 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 |||||||||||||| ||||| || ||||| | ||||||||||| || ||||| ||||| Sbjct: 821 tttgagatgtggggtgatggcctccagacccggtccttcacattcatagatgagtgtgtt 880 Query: 241 gagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatcgggagtgat 300 |||||||| || ||| | |||||||| || ||||| ||||| || ||||| || || ||| Sbjct: 881 gagggtgttctgaggttgacaaagtcggacttccgtgagccagtgaacattggaagcgat 940 Query: 301 gaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaacaagcagctg 360 |||||||| |||||||||||||||||||| || | || |||||||| | | | ||||| Sbjct: 941 gaaatggtaagcatgaacgagatggctgaaatcattctcagcttcgaggatagggagctg 1000 Query: 361 cccatccaccacatncctggccccgagggcgtncgtggccgtaactc 407 |||||||||||||| ||||| |||||||| || |||||||||||||| Sbjct: 1001 cccatccaccacatccctggacccgagggtgtccgtggccgtaactc 1047
>dbj|AK069385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012D14, full insert sequence Length = 1592 Score = 305 bits (154), Expect = 6e-80 Identities = 343/407 (84%) Strand = Plus / Plus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||| |||||||| ||||| |||||||| | ||||||||||||| ||||||||| Sbjct: 646 gcctatggtttggagaagcttgcaactgaggagctctgcaagcactacaccaaggacttt 705 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||||||||| ||||| ||||| ||||| ||||||||||| | ||| |||||||| Sbjct: 706 ggcattgagtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaa 765 Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||| | ||||||||||| ||||| |||||||| ||||||| || ||||||||| || Sbjct: 766 ggtggccgtgagaaggcaccagctgcattctgcaggaaggctcagacttccactgacagg 825 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 |||||||||||||| ||||| || ||||| | ||||||||||| || ||||| ||||| Sbjct: 826 tttgagatgtggggtgatggcctccagacccggtccttcacattcatagatgagtgtgtt 885 Query: 241 gagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatcgggagtgat 300 |||||||| || ||| | |||||||| || ||||| ||||| || ||||| || || ||| Sbjct: 886 gagggtgttctgaggttgacaaagtcggacttccgtgagccagtgaacattggaagcgat 945 Query: 301 gaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaacaagcagctg 360 |||||||| |||||||||||||||||||| || | || |||||||| | | | ||||| Sbjct: 946 gaaatggtaagcatgaacgagatggctgaaatcattctcagcttcgaggatagggagctg 1005 Query: 361 cccatccaccacatncctggccccgagggcgtncgtggccgtaactc 407 |||||||||||||| ||||| |||||||| || |||||||||||||| Sbjct: 1006 cccatccaccacatccctggacccgagggtgtccgtggccgtaactc 1052
>gb|BT016578.1| Zea mays clone Contig411 mRNA sequence Length = 1538 Score = 264 bits (133), Expect = 2e-67 Identities = 320/383 (83%) Strand = Plus / Plus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 ||||||||||||||||| ||||| || ||||| || ||||||||||||| ||||||||| Sbjct: 637 gcctatggcttggagaagcttgcaaccgaggagctgtgcaagcactacaccaaggacttt 696 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | ||| |||||||| || || ||||| ||||| || || ||||| | || |||||||| Sbjct: 697 ggcatcgagtgccgcgtcggccgcttccacaacatctacggccctttcggaacatggaaa 756 Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||| | ||||||||||| ||||| |||||||||||||||| || ||||| || || Sbjct: 757 ggtggccgcgagaaggcaccggctgccttctgcagaaaggctcagacatccacggagagg 816 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 |||||||||||||| |||||||| ||||| || |||||||| || || || || || ||| Sbjct: 817 tttgagatgtggggcgatggtctccagaccaggtccttcaccttcatcgacgagtgcgtg 876 Query: 241 gagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatcgggagtgat 300 |||||||| || || | || ||||| || ||||||||||| || |||||||| || ||| Sbjct: 877 gagggtgttctgagattgaccaagtcagacttccgcgagccagtgaacatcggaagcgat 936 Query: 301 gaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaacaagcagctg 360 || ||||||||||||||||||||||||||||| || |||||||| ||| | | | ||||| Sbjct: 937 gagatggtgagcatgaacgagatggctgagatcgtgctgggctttgaggataggaagctg 996 Query: 361 cccatccaccacatncctggccc 383 |||||||||||||| |||||||| Sbjct: 997 cccatccaccacatccctggccc 1019
>gb|AY104279.1| Zea mays PCO103545 mRNA sequence Length = 1547 Score = 264 bits (133), Expect = 2e-67 Identities = 320/383 (83%) Strand = Plus / Plus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 ||||||||||||||||| ||||| || ||||| || ||||||||||||| ||||||||| Sbjct: 639 gcctatggcttggagaagcttgcaaccgaggagctgtgcaagcactacaccaaggacttt 698 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | ||| |||||||| || || ||||| ||||| || || ||||| | || |||||||| Sbjct: 699 ggcatcgagtgccgcgtcggccgcttccacaacatctacggccctttcggaacatggaaa 758 Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||| | ||||||||||| ||||| |||||||||||||||| || ||||| || || Sbjct: 759 ggtggccgcgagaaggcaccggctgccttctgcagaaaggctcagacatccacggagagg 818 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 |||||||||||||| |||||||| ||||| || |||||||| || || || || || ||| Sbjct: 819 tttgagatgtggggcgatggtctccagaccaggtccttcaccttcatcgacgagtgcgtg 878 Query: 241 gagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatcgggagtgat 300 |||||||| || || | || ||||| || ||||||||||| || |||||||| || ||| Sbjct: 879 gagggtgttctgagattgaccaagtcagacttccgcgagccagtgaacatcggaagcgat 938 Query: 301 gaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaacaagcagctg 360 || ||||||||||||||||||||||||||||| || |||||||| ||| | | | ||||| Sbjct: 939 gagatggtgagcatgaacgagatggctgagatcgtgctgggctttgaggataggaagctg 998 Query: 361 cccatccaccacatncctggccc 383 |||||||||||||| |||||||| Sbjct: 999 cccatccaccacatccctggccc 1021
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 220 bits (111), Expect = 3e-54 Identities = 129/135 (95%) Strand = Plus / Minus Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | Sbjct: 131217 ggtggaagggagaaggcgcctgctgctttctgcagaaaagctctaacctccactgaccgt 131158 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 131157 tttgagatgtggggagatggtcttcagactagatccttcacgtttattgatgaatgtgtg 131098 Query: 241 gagggtgtcctcagg 255 ||||||||||||||| Sbjct: 131097 gagggtgtcctcagg 131083 Score = 165 bits (83), Expect = 1e-37 Identities = 132/149 (88%) Strand = Plus / Minus Query: 259 acaaagtctgatttccgcgagcctgtaaacatcgggagtgatgaaatggtgagcatgaac 318 |||||||| |||||||| |||||||||||||| || |||||||||||||| |||||||| Sbjct: 130221 acaaagtccgatttccgtgagcctgtaaacattggaagtgatgaaatggtcagcatgaat 130162 Query: 319 gagatggctgagatagtcctgggcttcgagaacaagcagctgcccatccaccacatncct 378 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| || Sbjct: 130161 gagatggctgagatagtcctcagctttgagaacaagcagctgcccatccaccacatcccc 130102 Query: 379 ggccccgagggcgtncgtggccgtaactc 407 || || ||||| || ||||| || ||||| Sbjct: 130101 gggccagagggtgtccgtggtcgcaactc 130073 Score = 119 bits (60), Expect = 7e-24 Identities = 107/123 (86%) Strand = Plus / Minus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||||||||| |||||||| ||||||||| || ||||||| ||||||||||| ||| Sbjct: 131414 gcctatggcttggaaaaacttgctactgaggaactgtgcaagcattacacaaaggatttt 131355 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||| || |||||||| |||||||| ||||| ||||| || | ||| ||||||||| Sbjct: 131354 ggcattgaatgtcgggttggccgctttcataatatctatggtccctttggaacatggaag 131295 Query: 121 ggt 123 ||| Sbjct: 131294 ggt 131292 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 341 gcttcgagaacaagcagctgcccatcca 368 |||| ||||||||||||||||| ||||| Sbjct: 11917 gcttagagaacaagcagctgcctatcca 11890
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 220 bits (111), Expect = 3e-54 Identities = 129/135 (95%) Strand = Plus / Minus Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | Sbjct: 21607698 ggtggaagggagaaggcgcctgctgctttctgcagaaaagctctaacctccactgaccgt 21607639 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 21607638 tttgagatgtggggagatggtcttcagactagatccttcacgtttattgatgaatgtgtg 21607579 Query: 241 gagggtgtcctcagg 255 ||||||||||||||| Sbjct: 21607578 gagggtgtcctcagg 21607564 Score = 165 bits (83), Expect = 1e-37 Identities = 132/149 (88%) Strand = Plus / Minus Query: 259 acaaagtctgatttccgcgagcctgtaaacatcgggagtgatgaaatggtgagcatgaac 318 |||||||| |||||||| |||||||||||||| || |||||||||||||| |||||||| Sbjct: 21606702 acaaagtccgatttccgtgagcctgtaaacattggaagtgatgaaatggtcagcatgaat 21606643 Query: 319 gagatggctgagatagtcctgggcttcgagaacaagcagctgcccatccaccacatncct 378 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| || Sbjct: 21606642 gagatggctgagatagtcctcagctttgagaacaagcagctgcccatccaccacatcccc 21606583 Query: 379 ggccccgagggcgtncgtggccgtaactc 407 || || ||||| || ||||| || ||||| Sbjct: 21606582 gggccagagggtgtccgtggtcgcaactc 21606554 Score = 119 bits (60), Expect = 7e-24 Identities = 107/123 (86%) Strand = Plus / Minus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||||||||| |||||||| ||||||||| || ||||||| ||||||||||| ||| Sbjct: 21607895 gcctatggcttggaaaaacttgctactgaggaactgtgcaagcattacacaaaggatttt 21607836 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||| || |||||||| |||||||| ||||| ||||| || | ||| ||||||||| Sbjct: 21607835 ggcattgaatgtcgggttggccgctttcataatatctatggtccctttggaacatggaag 21607776 Query: 121 ggt 123 ||| Sbjct: 21607775 ggt 21607773 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 341 gcttcgagaacaagcagctgcccatcca 368 |||| ||||||||||||||||| ||||| Sbjct: 21488398 gcttagagaacaagcagctgcctatcca 21488371
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 220 bits (111), Expect = 3e-54 Identities = 129/135 (95%) Strand = Plus / Minus Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | Sbjct: 21917897 ggtggaagggagaaggcgcctgctgctttctgcagaaaagctctaacctccactgaccgt 21917838 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 21917837 tttgagatgtggggagatggtcttcagactagatccttcacgtttattgatgaatgtgtg 21917778 Query: 241 gagggtgtcctcagg 255 ||||||||||||||| Sbjct: 21917777 gagggtgtcctcagg 21917763 Score = 165 bits (83), Expect = 1e-37 Identities = 132/149 (88%) Strand = Plus / Minus Query: 259 acaaagtctgatttccgcgagcctgtaaacatcgggagtgatgaaatggtgagcatgaac 318 |||||||| |||||||| |||||||||||||| || |||||||||||||| |||||||| Sbjct: 21916901 acaaagtccgatttccgtgagcctgtaaacattggaagtgatgaaatggtcagcatgaat 21916842 Query: 319 gagatggctgagatagtcctgggcttcgagaacaagcagctgcccatccaccacatncct 378 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| || Sbjct: 21916841 gagatggctgagatagtcctcagctttgagaacaagcagctgcccatccaccacatcccc 21916782 Query: 379 ggccccgagggcgtncgtggccgtaactc 407 || || ||||| || ||||| || ||||| Sbjct: 21916781 gggccagagggtgtccgtggtcgcaactc 21916753 Score = 119 bits (60), Expect = 7e-24 Identities = 107/123 (86%) Strand = Plus / Minus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||||||||| |||||||| ||||||||| || ||||||| ||||||||||| ||| Sbjct: 21918094 gcctatggcttggaaaaacttgctactgaggaactgtgcaagcattacacaaaggatttt 21918035 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||| || |||||||| |||||||| ||||| ||||| || | ||| ||||||||| Sbjct: 21918034 ggcattgaatgtcgggttggccgctttcataatatctatggtccctttggaacatggaag 21917975 Query: 121 ggt 123 ||| Sbjct: 21917974 ggt 21917972 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 341 gcttcgagaacaagcagctgcccatcca 368 |||| ||||||||||||||||| ||||| Sbjct: 21798597 gcttagagaacaagcagctgcctatcca 21798570
>ref|NM_122767.2| Arabidopsis thaliana GDP-mannose 3,5-epimerase/ catalytic AT5G28840 mRNA, complete cds Length = 1611 Score = 186 bits (94), Expect = 4e-44 Identities = 245/296 (82%) Strand = Plus / Plus Query: 112 acatggaagggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctcc 171 |||||||| ||||||||||||||||| || ||||||||||| || ||||||| || ||| Sbjct: 806 acatggaaaggtggaagggagaaggctccagctgctttctgtaggaaggctcagacttcc 865 Query: 172 actgactggtttgagatgtggggagatggtctgcagactagatccttcacatttattgat 231 ||||| |||||||||||||||||||||| || ||||| | || || || ||||| ||| Sbjct: 866 actgataggtttgagatgtggggagatgggcttcagacccgttcttttacctttatcgat 925 Query: 232 gaatgtgtggagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatc 291 || ||||| || ||||| |||||| | ||||| || |||||||| ||||| || |||||| Sbjct: 926 gagtgtgttgaaggtgtactcaggttgacaaaatcagatttccgtgagccggtgaacatc 985 Query: 292 gggagtgatgaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaac 351 || || ||||| |||||||||||||| |||||||||||||| || || |||| ||| | Sbjct: 986 ggaagcgatgagatggtgagcatgaatgagatggctgagatggttctcagctttgaggaa 1045 Query: 352 aagcagctgcccatccaccacatncctggccccgagggcgtncgtggccgtaactc 407 ||| |||| || || |||||||| |||||||| || || || ||||| |||||||| Sbjct: 1046 aagaagcttccaattcaccacattcctggcccggaaggtgttcgtggtcgtaactc 1101
>gb|AY116953.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1134 Score = 186 bits (94), Expect = 4e-44 Identities = 245/296 (82%) Strand = Plus / Plus Query: 112 acatggaagggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctcc 171 |||||||| ||||||||||||||||| || ||||||||||| || ||||||| || ||| Sbjct: 628 acatggaaaggtggaagggagaaggctccagctgctttctgtaggaaggctcagacttcc 687 Query: 172 actgactggtttgagatgtggggagatggtctgcagactagatccttcacatttattgat 231 ||||| |||||||||||||||||||||| || ||||| | || || || ||||| ||| Sbjct: 688 actgataggtttgagatgtggggagatgggcttcagacccgttcttttacctttatcgat 747 Query: 232 gaatgtgtggagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatc 291 || ||||| || ||||| |||||| | ||||| || |||||||| ||||| || |||||| Sbjct: 748 gagtgtgttgaaggtgtactcaggttgacaaaatcagatttccgtgagccggtgaacatc 807 Query: 292 gggagtgatgaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaac 351 || || ||||| |||||||||||||| |||||||||||||| || || |||| ||| | Sbjct: 808 ggaagcgatgagatggtgagcatgaatgagatggctgagatggttctcagctttgaggaa 867 Query: 352 aagcagctgcccatccaccacatncctggccccgagggcgtncgtggccgtaactc 407 ||| |||| || || |||||||| |||||||| || || || ||||| |||||||| Sbjct: 868 aagaagcttccaattcaccacattcctggcccggaaggtgttcgtggtcgtaactc 923
>gb|AY057694.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1404 Score = 186 bits (94), Expect = 4e-44 Identities = 245/296 (82%) Strand = Plus / Plus Query: 112 acatggaagggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctcc 171 |||||||| ||||||||||||||||| || ||||||||||| || ||||||| || ||| Sbjct: 691 acatggaaaggtggaagggagaaggctccagctgctttctgtaggaaggctcagacttcc 750 Query: 172 actgactggtttgagatgtggggagatggtctgcagactagatccttcacatttattgat 231 ||||| |||||||||||||||||||||| || ||||| | || || || ||||| ||| Sbjct: 751 actgataggtttgagatgtggggagatgggcttcagacccgttcttttacctttatcgat 810 Query: 232 gaatgtgtggagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatc 291 || ||||| || ||||| |||||| | ||||| || |||||||| ||||| || |||||| Sbjct: 811 gagtgtgttgaaggtgtactcaggttgacaaaatcagatttccgtgagccggtgaacatc 870 Query: 292 gggagtgatgaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaac 351 || || ||||| |||||||||||||| |||||||||||||| || || |||| ||| | Sbjct: 871 ggaagcgatgagatggtgagcatgaatgagatggctgagatggttctcagctttgaggaa 930 Query: 352 aagcagctgcccatccaccacatncctggccccgagggcgtncgtggccgtaactc 407 ||| |||| || || |||||||| |||||||| || || || ||||| |||||||| Sbjct: 931 aagaagcttccaattcaccacattcctggcccggaaggtgttcgtggtcgtaactc 986
>gb|AY057660.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1452 Score = 186 bits (94), Expect = 4e-44 Identities = 245/296 (82%) Strand = Plus / Plus Query: 112 acatggaagggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctcc 171 |||||||| ||||||||||||||||| || ||||||||||| || ||||||| || ||| Sbjct: 691 acatggaaaggtggaagggagaaggctccagctgctttctgtaggaaggctcagacttcc 750 Query: 172 actgactggtttgagatgtggggagatggtctgcagactagatccttcacatttattgat 231 ||||| |||||||||||||||||||||| || ||||| | || || || ||||| ||| Sbjct: 751 actgataggtttgagatgtggggagatgggcttcagacccgttcttttacctttatcgat 810 Query: 232 gaatgtgtggagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatc 291 || ||||| || ||||| |||||| | ||||| || |||||||| ||||| || |||||| Sbjct: 811 gagtgtgttgaaggtgtactcaggttgacaaaatcagatttccgtgagccggtgaacatc 870 Query: 292 gggagtgatgaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaac 351 || || ||||| |||||||||||||| |||||||||||||| || || |||| ||| | Sbjct: 871 ggaagcgatgagatggtgagcatgaatgagatggctgagatggttctcagctttgaggaa 930 Query: 352 aagcagctgcccatccaccacatncctggccccgagggcgtncgtggccgtaactc 407 ||| |||| || || |||||||| |||||||| || || || ||||| |||||||| Sbjct: 931 aagaagcttccaattcaccacattcctggcccggaaggtgttcgtggtcgtaactc 986
>gb|BT013590.1| Lycopersicon esculentum clone 132353F, mRNA sequence Length = 1880 Score = 135 bits (68), Expect = 1e-28 Identities = 250/311 (80%) Strand = Plus / Plus Query: 28 gaggaattgngcaagcactacacaaaggactttgacattgagtgccgggttggtcgcttt 87 ||||| ||| | |||||||||| |||||||||| ||||| || || |||| || || Sbjct: 730 gaggagttgtgtaagcactacaacaaggactttggaattgaatgtcgcattggccgtttc 789 Query: 88 cacaatatatatggcccatatgggacatggaagggtggaagggagaaggcacctgctgct 147 || || || |||||||||| ||| |||||||| || ||| | ||||| ||||| || ||| Sbjct: 790 cataacatttatggcccatttggaacatggaaaggcggacgtgagaaagcaccagcagct 849 Query: 148 ttctgcagaaaggctctaacctccactgactggtttgagatgtggggagatggtctgcag 207 || || ||||| || || || ||||||||| || ||||||||||||||||| ||| Sbjct: 850 ttttgtagaaaagccctcacttccactgacaaattcgagatgtggggagatggaaagcaa 909 Query: 208 actagatccttcacatttattgatgaatgtgtggagggtgtcctcaggctcacaaagtct 267 ||| |||| ||||| || |||||||| ||||| || |||||||| ||| | ||||| || Sbjct: 910 actcgatctttcaccttcattgatgagtgtgttgaaggtgtcctgaggttaacaaaatcc 969 Query: 268 gatttccgcgagcctgtaaacatcgggagtgatgaaatggtgagcatgaacgagatggct 327 || ||| | |||||||| |||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 970 gacttcagagagcctgtgaacatcggaagtgatgagatggtaagcatgaatgagatggca 1029 Query: 328 gagatagtcct 338 ||||||||||| Sbjct: 1030 gagatagtcct 1040
>gb|AY106775.1| Zea mays PCO117540 mRNA sequence Length = 541 Score = 121 bits (61), Expect = 2e-24 Identities = 95/107 (88%) Strand = Plus / Plus Query: 301 gaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaacaagcagctg 360 |||||||||||||||||||||||||| || || |||||| |||| ||||||||||||||| Sbjct: 2 gaaatggtgagcatgaacgagatggcggaaatggtcctgagctttgagaacaagcagctg 61 Query: 361 cccatccaccacatncctggccccgagggcgtncgtggccgtaactc 407 |||||||||||||| || || || |||||||| ||||| || ||||| Sbjct: 62 cccatccaccacatccccgggccggagggcgtgcgtgggcgcaactc 108
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 117 bits (59), Expect = 3e-23 Identities = 126/149 (84%) Strand = Plus / Plus Query: 259 acaaagtctgatttccgcgagcctgtaaacatcgggagtgatgaaatggtgagcatgaac 318 |||||||| || ||||| ||||| || ||||| || || ||||||||||| ||||||||| Sbjct: 67984 acaaagtcggacttccgtgagccagtgaacattggaagcgatgaaatggtaagcatgaac 68043 Query: 319 gagatggctgagatagtcctgggcttcgagaacaagcagctgcccatccaccacatncct 378 ||||||||||| || | || |||||||| | | | ||||||||||||||||||| ||| Sbjct: 68044 gagatggctgaaatcattctcagcttcgaggatagggagctgcccatccaccacatccct 68103 Query: 379 ggccccgagggcgtncgtggccgtaactc 407 || |||||||| || |||||||||||||| Sbjct: 68104 ggacccgagggtgtccgtggccgtaactc 68132 Score = 113 bits (57), Expect = 5e-22 Identities = 110/128 (85%) Strand = Plus / Plus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||| |||||||| ||||| |||||||| | ||||||||||||| ||||||||| Sbjct: 67551 gcctatggtttggagaagcttgcaactgaggagctctgcaagcactacaccaaggacttt 67610 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||||||||| ||||| ||||| ||||| ||||||||||| | ||| |||||||| Sbjct: 67611 ggcattgagtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaa 67670 Query: 121 ggtggaag 128 ||| |||| Sbjct: 67671 ggtagaag 67678 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 130 gagaaggcacctgctgctttctgcagaaaggctctaacctccactgactggtttgagatg 189 ||||||||||| ||||| |||||||| ||||||| || ||||||||| ||||||||||| Sbjct: 67759 gagaaggcaccagctgcattctgcaggaaggctcagacttccactgacaggtttgagatg 67818 Query: 190 tggggagatggtctgcagactagatccttcacatttattgatgaatgtgtggagggtgt 248 ||||| ||||| || ||||| | ||||||||||| || ||||| ||||| |||||||| Sbjct: 67819 tggggtgatggcctccagacccggtccttcacattcatagatgagtgtgttgagggtgt 67877
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 117 bits (59), Expect = 3e-23 Identities = 126/149 (84%) Strand = Plus / Plus Query: 259 acaaagtctgatttccgcgagcctgtaaacatcgggagtgatgaaatggtgagcatgaac 318 |||||||| || ||||| ||||| || ||||| || || ||||||||||| ||||||||| Sbjct: 14128346 acaaagtcggacttccgtgagccagtgaacattggaagcgatgaaatggtaagcatgaac 14128405 Query: 319 gagatggctgagatagtcctgggcttcgagaacaagcagctgcccatccaccacatncct 378 ||||||||||| || | || |||||||| | | | ||||||||||||||||||| ||| Sbjct: 14128406 gagatggctgaaatcattctcagcttcgaggatagggagctgcccatccaccacatccct 14128465 Query: 379 ggccccgagggcgtncgtggccgtaactc 407 || |||||||| || |||||||||||||| Sbjct: 14128466 ggacccgagggtgtccgtggccgtaactc 14128494 Score = 113 bits (57), Expect = 5e-22 Identities = 110/128 (85%) Strand = Plus / Plus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||| |||||||| ||||| |||||||| | ||||||||||||| ||||||||| Sbjct: 14127913 gcctatggtttggagaagcttgcaactgaggagctctgcaagcactacaccaaggacttt 14127972 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||||||||| ||||| ||||| ||||| ||||||||||| | ||| |||||||| Sbjct: 14127973 ggcattgagtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaa 14128032 Query: 121 ggtggaag 128 ||| |||| Sbjct: 14128033 ggtagaag 14128040 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 130 gagaaggcacctgctgctttctgcagaaaggctctaacctccactgactggtttgagatg 189 ||||||||||| ||||| |||||||| ||||||| || ||||||||| ||||||||||| Sbjct: 14128121 gagaaggcaccagctgcattctgcaggaaggctcagacttccactgacaggtttgagatg 14128180 Query: 190 tggggagatggtctgcagactagatccttcacatttattgatgaatgtgtggagggtgt 248 ||||| ||||| || ||||| | ||||||||||| || ||||| ||||| |||||||| Sbjct: 14128181 tggggtgatggcctccagacccggtccttcacattcatagatgagtgtgttgagggtgt 14128239
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 117 bits (59), Expect = 3e-23 Identities = 126/149 (84%) Strand = Plus / Plus Query: 259 acaaagtctgatttccgcgagcctgtaaacatcgggagtgatgaaatggtgagcatgaac 318 |||||||| || ||||| ||||| || ||||| || || ||||||||||| ||||||||| Sbjct: 419 acaaagtcggacttccgtgagccagtgaacattggaagcgatgaaatggtaagcatgaac 478 Query: 319 gagatggctgagatagtcctgggcttcgagaacaagcagctgcccatccaccacatncct 378 ||||||||||| || | || |||||||| | | | ||||||||||||||||||| ||| Sbjct: 479 gagatggctgaaatcattctcagcttcgaggatagggagctgcccatccaccacatccct 538 Query: 379 ggccccgagggcgtncgtggccgtaactc 407 || |||||||| || |||||||||||||| Sbjct: 539 ggacccgagggtgtccgtggccgtaactc 567 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 130 gagaaggcacctgctgctttctgcagaaaggctctaacctccactgactggtttgagatg 189 ||||||||||| ||||| |||||||| ||||||| || ||||||||| ||||||||||| Sbjct: 194 gagaaggcaccagctgcattctgcaggaaggctcagacttccactgacaggtttgagatg 253 Query: 190 tggggagatggtctgcagactagatccttcacatttattgatgaatgtgtggagggtgt 248 ||||| ||||| || ||||| | ||||||||||| || ||||| ||||| |||||||| Sbjct: 254 tggggtgatggcctccagacccggtccttcacattcatagatgagtgtgttgagggtgt 312 Score = 93.7 bits (47), Expect = 4e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 38 gcaagcactacacaaaggactttgacattgagtgccgggttggtcgctttcacaatatat 97 ||||||||||||| |||||||||| |||||||||||| ||||| ||||| ||||| |||| Sbjct: 23 gcaagcactacaccaaggactttggcattgagtgccgtgttggccgcttccacaacatat 82 Query: 98 atggcccatatgggacatggaagggtggaag 128 ||||||| | ||| |||||||| ||| |||| Sbjct: 83 atggcccctttggaacatggaaaggtagaag 113
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 117 bits (59), Expect = 3e-23 Identities = 126/149 (84%) Strand = Plus / Plus Query: 259 acaaagtctgatttccgcgagcctgtaaacatcgggagtgatgaaatggtgagcatgaac 318 |||||||| || ||||| ||||| || ||||| || || ||||||||||| ||||||||| Sbjct: 144475 acaaagtcggacttccgtgagccagtgaacattggaagcgatgaaatggtaagcatgaac 144534 Query: 319 gagatggctgagatagtcctgggcttcgagaacaagcagctgcccatccaccacatncct 378 ||||||||||| || | || |||||||| | | | ||||||||||||||||||| ||| Sbjct: 144535 gagatggctgaaatcattctcagcttcgaggatagggagctgcccatccaccacatccct 144594 Query: 379 ggccccgagggcgtncgtggccgtaactc 407 || |||||||| || |||||||||||||| Sbjct: 144595 ggacccgagggtgtccgtggccgtaactc 144623 Score = 113 bits (57), Expect = 5e-22 Identities = 110/128 (85%) Strand = Plus / Plus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||| |||||||| ||||| |||||||| | ||||||||||||| ||||||||| Sbjct: 144042 gcctatggtttggagaagcttgcaactgaggagctctgcaagcactacaccaaggacttt 144101 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||||||||| ||||| ||||| ||||| ||||||||||| | ||| |||||||| Sbjct: 144102 ggcattgagtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaa 144161 Query: 121 ggtggaag 128 ||| |||| Sbjct: 144162 ggtagaag 144169 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 130 gagaaggcacctgctgctttctgcagaaaggctctaacctccactgactggtttgagatg 189 ||||||||||| ||||| |||||||| ||||||| || ||||||||| ||||||||||| Sbjct: 144250 gagaaggcaccagctgcattctgcaggaaggctcagacttccactgacaggtttgagatg 144309 Query: 190 tggggagatggtctgcagactagatccttcacatttattgatgaatgtgtggagggtgt 248 ||||| ||||| || ||||| | ||||||||||| || ||||| ||||| |||||||| Sbjct: 144310 tggggtgatggcctccagacccggtccttcacattcatagatgagtgtgttgagggtgt 144368
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 117 bits (59), Expect = 3e-23 Identities = 126/149 (84%) Strand = Plus / Plus Query: 259 acaaagtctgatttccgcgagcctgtaaacatcgggagtgatgaaatggtgagcatgaac 318 |||||||| || ||||| ||||| || ||||| || || ||||||||||| ||||||||| Sbjct: 14136588 acaaagtcggacttccgtgagccagtgaacattggaagcgatgaaatggtaagcatgaac 14136647 Query: 319 gagatggctgagatagtcctgggcttcgagaacaagcagctgcccatccaccacatncct 378 ||||||||||| || | || |||||||| | | | ||||||||||||||||||| ||| Sbjct: 14136648 gagatggctgaaatcattctcagcttcgaggatagggagctgcccatccaccacatccct 14136707 Query: 379 ggccccgagggcgtncgtggccgtaactc 407 || |||||||| || |||||||||||||| Sbjct: 14136708 ggacccgagggtgtccgtggccgtaactc 14136736 Score = 113 bits (57), Expect = 5e-22 Identities = 110/128 (85%) Strand = Plus / Plus Query: 1 gcctatggcttggagaaacttgccactgaggaattgngcaagcactacacaaaggacttt 60 |||||||| |||||||| ||||| |||||||| | ||||||||||||| ||||||||| Sbjct: 14136155 gcctatggtttggagaagcttgcaactgaggagctctgcaagcactacaccaaggacttt 14136214 Query: 61 gacattgagtgccgggttggtcgctttcacaatatatatggcccatatgggacatggaag 120 | |||||||||||| ||||| ||||| ||||| ||||||||||| | ||| |||||||| Sbjct: 14136215 ggcattgagtgccgtgttggccgcttccacaacatatatggcccctttggaacatggaaa 14136274 Query: 121 ggtggaag 128 ||| |||| Sbjct: 14136275 ggtagaag 14136282 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 130 gagaaggcacctgctgctttctgcagaaaggctctaacctccactgactggtttgagatg 189 ||||||||||| ||||| |||||||| ||||||| || ||||||||| ||||||||||| Sbjct: 14136363 gagaaggcaccagctgcattctgcaggaaggctcagacttccactgacaggtttgagatg 14136422 Query: 190 tggggagatggtctgcagactagatccttcacatttattgatgaatgtgtggagggtgt 248 ||||| ||||| || ||||| | ||||||||||| || ||||| ||||| |||||||| Sbjct: 14136423 tggggtgatggcctccagacccggtccttcacattcatagatgagtgtgttgagggtgt 14136481
>gb|AF272706.1|F7P1 Arabidopsis thaliana BAC F7P1 Length = 110714 Score = 93.7 bits (47), Expect = 4e-16 Identities = 113/135 (83%) Strand = Plus / Minus Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||||||||||||||| || ||||||||||| || ||||||| || |||||||| || Sbjct: 19325 ggtggaagggagaaggctccagctgctttctgtaggaaggctcagacttccactgatagg 19266 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 |||||||||||||||||||| || ||||| | || || || ||||| ||||| ||||| Sbjct: 19265 tttgagatgtggggagatgggcttcagacccgttcttttacctttatcgatgagtgtgtt 19206 Query: 241 gagggtgtcctcagg 255 || ||||| |||||| Sbjct: 19205 gaaggtgtactcagg 19191 Score = 93.7 bits (47), Expect = 4e-16 Identities = 123/149 (82%) Strand = Plus / Minus Query: 259 acaaagtctgatttccgcgagcctgtaaacatcgggagtgatgaaatggtgagcatgaac 318 ||||| || |||||||| ||||| || |||||||| || ||||| |||||||||||||| Sbjct: 19109 acaaaatcagatttccgtgagccggtgaacatcggaagcgatgagatggtgagcatgaat 19050 Query: 319 gagatggctgagatagtcctgggcttcgagaacaagcagctgcccatccaccacatncct 378 |||||||||||||| || || |||| ||| | ||| |||| || || |||||||| ||| Sbjct: 19049 gagatggctgagatggttctcagctttgaggaaaagaagcttccaattcaccacattcct 18990 Query: 379 ggccccgagggcgtncgtggccgtaactc 407 ||||| || || || ||||| |||||||| Sbjct: 18989 ggcccggaaggtgttcgtggtcgtaactc 18961
>dbj|AK118786.1| Arabidopsis thaliana mRNA, clone: RAFL21-11-O14 Length = 550 Score = 93.7 bits (47), Expect = 4e-16 Identities = 113/135 (83%) Strand = Plus / Minus Query: 121 ggtggaagggagaaggcacctgctgctttctgcagaaaggctctaacctccactgactgg 180 ||||||||||||||||| || ||||||||||| || ||||||| || |||||||| || Sbjct: 410 ggtggaagggagaaggctccagctgctttctgtaggaaggctcagacttccactgatagg 351 Query: 181 tttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgtg 240 |||||||||||||||||||| || ||||| | || || || ||||| ||||| ||||| Sbjct: 350 tttgagatgtggggagatgggcttcagacccgttcttttacctttatcgatgagtgtgtt 291 Query: 241 gagggtgtcctcagg 255 || ||||| |||||| Sbjct: 290 gaaggtgtactcagg 276 Score = 93.7 bits (47), Expect = 4e-16 Identities = 123/149 (82%) Strand = Plus / Minus Query: 259 acaaagtctgatttccgcgagcctgtaaacatcgggagtgatgaaatggtgagcatgaac 318 ||||| || |||||||| ||||| || |||||||| || ||||| |||||||||||||| Sbjct: 194 acaaaatcagatttccgtgagccggtgaacatcggaagcgatgagatggtgagcatgaat 135 Query: 319 gagatggctgagatagtcctgggcttcgagaacaagcagctgcccatccaccacatncct 378 |||||||||||||| || || |||| ||| | ||| |||| || || |||||||| ||| Sbjct: 134 gagatggctgagatggttctcagctttgaggaaaagaagcttccaattcaccacattcct 75 Query: 379 ggccccgagggcgtncgtggccgtaactc 407 ||||| || || || ||||| |||||||| Sbjct: 74 ggcccggaaggtgttcgtggtcgtaactc 46
>gb|DQ268848.1| Solanum tuberosum clone 155B09 NAD-dependent epimerase/dehydratase family protein-like protein mRNA, complete cds Length = 1521 Score = 67.9 bits (34), Expect = 2e-08 Identities = 179/228 (78%) Strand = Plus / Plus Query: 180 gtttgagatgtggggagatggtctgcagactagatccttcacatttattgatgaatgtgt 239 |||||| |||||||||||||| || || || | || ||||| || |||||||| ||||| Sbjct: 717 gtttgaaatgtggggagatggacttcaaacacgttcattcaccttcattgatgagtgtgt 776 Query: 240 ggagggtgtcctcaggctcacaaagtctgatttccgcgagcctgtaaacatcgggagtga 299 || || || || || | ||||| || || ||||| ||||| || ||||| || ||||| Sbjct: 777 tgaaggggttcttagattgacaaaatccgacttccgagagccagtgaacataggaagtga 836 Query: 300 tgaaatggtgagcatgaacgagatggctgagatagtcctgggcttcgagaacaagcagct 359 ||| ||||| |||||||| |||||||||||||| || || |||| ||| ||||| |||| Sbjct: 837 tgagatggtcagcatgaatgagatggctgagatggttctcagctttgaggacaagaagct 896 Query: 360 gcccatccaccacatncctggccccgagggcgtncgtggccgtaactc 407 | |||| ||||| || ||||| || ||||| ||||| || ||||| Sbjct: 897 tgctgtccaacacattccaggcccagaaggcgtccgtggtcgcaactc 944
>gb|DQ207722.1| Zea mays cultivar B73 IDP512 marker Length = 527 Score = 50.1 bits (25), Expect = 0.006 Identities = 27/28 (96%) Strand = Plus / Minus Query: 356 agctgcccatccaccacatncctggccc 383 ||||||||||||||||||| |||||||| Sbjct: 458 agctgcccatccaccacatccctggccc 431
>dbj|AB235855.1| Oryza sativa (japonica cultivar-group) OsGME mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1053 Score = 50.1 bits (25), Expect = 0.006 Identities = 88/109 (80%) Strand = Plus / Plus Query: 38 gcaagcactacacaaaggactttgacattgagtgccgggttggtcgctttcacaatatat 97 ||||| |||||| |||||||||| |||||||| ||| |||||||||| ||||| || | Sbjct: 494 gcaagtactacaacaaggactttggcattgagttccgcattggtcgcttccacaacatct 553 Query: 98 atggcccatatgggacatggaagggtggaagggagaaggcacctgctgc 146 | ||||| | || || ||||||||||| | |||||||| || ||||| Sbjct: 554 acggcccccacggcacttggaagggtggtcgcgagaaggcccccgctgc 602
>dbj|AK109046.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-D11, full insert sequence Length = 1134 Score = 50.1 bits (25), Expect = 0.006 Identities = 88/109 (80%) Strand = Plus / Plus Query: 38 gcaagcactacacaaaggactttgacattgagtgccgggttggtcgctttcacaatatat 97 ||||| |||||| |||||||||| |||||||| ||| |||||||||| ||||| || | Sbjct: 514 gcaagtactacaacaaggactttggcattgagttccgcattggtcgcttccacaacatct 573 Query: 98 atggcccatatgggacatggaagggtggaagggagaaggcacctgctgc 146 | ||||| | || || ||||||||||| | |||||||| || ||||| Sbjct: 574 acggcccccacggcacttggaagggtggtcgcgagaaggcccccgctgc 622
>emb|CT486003.10| Mouse DNA sequence from clone RP23-415F11 on chromosome 14, complete sequence Length = 181037 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 282 tgtaaacatcgggagtgatgaaatgg 307 |||||||||| ||||||||||||||| Sbjct: 92765 tgtaaacatcaggagtgatgaaatgg 92740
>gb|AC133495.4| Mus musculus BAC clone RP24-331G15 from chromosome 14, complete sequence Length = 195118 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 catttattgatgaatgtgtgg 241 ||||||||||||||||||||| Sbjct: 50149 catttattgatgaatgtgtgg 50129
>gb|DP000032.1| Felis catus target 116 genomic scaffold Length = 376810 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 ggaagggtggaagggagaagg 136 ||||||||||||||||||||| Sbjct: 231515 ggaagggtggaagggagaagg 231535
>gb|AC117937.4| Canis familiaris clone RP81-182F3, complete sequence Length = 152861 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ctttcacaatatatatggcc 103 |||||||||||||||||||| Sbjct: 103973 ctttcacaatatatatggcc 103954
>gb|AC013391.12| Homo sapiens chromosome 15, clone RP11-429B14, complete sequence Length = 210797 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 112 acatggaagggtggaagggagaaggcac 139 ||||||| |||||| ||||||||||||| Sbjct: 201684 acatggaggggtggcagggagaaggcac 201711
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gagaaacttgccactgagga 32 |||||||||||||||||||| Sbjct: 734176 gagaaacttgccactgagga 734195
>dbj|AB226775.1| Aspergillus oryzae cDNA, contig sequence: AoEST3637 Length = 711 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gatgaatgtgtggagggtgt 248 |||||||||||||||||||| Sbjct: 213 gatgaatgtgtggagggtgt 194
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gatgaatgtgtggagggtgt 248 |||||||||||||||||||| Sbjct: 1013014 gatgaatgtgtggagggtgt 1012995
>gb|AC005317.2| Homo sapiens chromosome 15q26.1 clone PAC pDJ457j11 containing DNA polymerase gamma (polg) gene, complete sequence Length = 170612 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 112 acatggaagggtggaagggagaaggcac 139 ||||||| |||||| ||||||||||||| Sbjct: 142320 acatggaggggtggcagggagaaggcac 142293
>ref|XM_683221.1| PREDICTED: Danio rerio similar to membrane-associated nucleic acid binding protein (LOC559834), mRNA Length = 3650 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cctccactgactggtttgag 186 |||||||||||||||||||| Sbjct: 344 cctccactgactggtttgag 325
>emb|BX248511.4| Zebrafish DNA sequence from clone CH211-243G18 in linkage group 10, complete sequence Length = 176986 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cctccactgactggtttgag 186 |||||||||||||||||||| Sbjct: 44935 cctccactgactggtttgag 44954
>gb|AC005316.1|AC005316 Human Chromosome 15q26.1 PAC clone pDJ10k5 containing human DNA polymerase gamma (polg) gene, complete sequence Length = 117270 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 112 acatggaagggtggaagggagaaggcac 139 ||||||| |||||| ||||||||||||| Sbjct: 85563 acatggaggggtggcagggagaaggcac 85536
>gb|AC133637.2| Homo sapiens chromosome 15, clone CTD-2335A18, complete sequence Length = 61736 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 112 acatggaagggtggaagggagaaggcac 139 ||||||| |||||| ||||||||||||| Sbjct: 5934 acatggaggggtggcagggagaaggcac 5961 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,424,012 Number of Sequences: 3902068 Number of extensions: 3424012 Number of successful extensions: 72671 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72527 Number of HSP's gapped (non-prelim): 134 length of query: 410 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 388 effective length of database: 17,147,199,772 effective search space: 6653113511536 effective search space used: 6653113511536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
