| Clone Name | bags26a19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018927.1| Zea mays clone Contig55.F mRNA sequence Length = 1321 Score = 688 bits (347), Expect = 0.0 Identities = 587/667 (88%) Strand = Plus / Plus Query: 8 tgtttggagcaaaaatgttagaaaatgatggtgacttcctttacctactagcagacgctg 67 |||||||||| | || |||||||||||||||||||||||| ||| |||| ||||| |||| Sbjct: 123 tgtttggagcgacaaagttagaaaatgatggtgacttcctctacttactggcagatgctg 182 Query: 68 cagctattgcgttccaatatggcaatcctgatgttttgtgctccccactagttgaagcaa 127 | |||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||| Sbjct: 183 ctgctattgcgttccaatatggtaatcctgatgtcttgtgctccccactagctgaagcaa 242 Query: 128 agaagaatggtacggatttggtggaagcatttgctcattacgtgaacagttattatgtcg 187 |||||||||| || |||||||||||| |||||||| ||||||||| |||||| | | Sbjct: 243 agaagaatgggacagatttggtggaaacatttgctagttacgtgaaagattattacattg 302 Query: 188 ggagatttaaggcatcagttgcatcatatgatcagaagtatttgaagaacacaactccag 247 | | |||| ||| ||||| ||||||||||||||| | |||||||||||||||||||| | Sbjct: 303 gaaaatttggggcgtcagtagcatcatatgatcagcaatatttgaagaacacaactcctg 362 Query: 248 ctgaatcttcatatagattgtggtggtatcaagtttgcagtgaggtttcatatttccaag 307 ||||||| ||||||||| | |||||||| |||||||||||||||||| |||||||||| | Sbjct: 363 ctgaatcctcatatagactatggtggtaccaagtttgcagtgaggttgcatatttccagg 422 Query: 308 tggcaccaaaaaatgatagcgtccgctctacaaagatcgatacaagataccatttagact 367 ||||||||||||| ||||| || || || |||||||||| || || |||||||| |||| Sbjct: 423 tggcaccaaaaaacgatagtgttcgttccccaaagatcgacacgaggtaccatttggact 482 Query: 368 tgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatgacaaacttatact 427 |||||| ||||||||| || |||||||| || |||||||| | |||||||||||||||| Sbjct: 483 tgtgcagaaatgttttcggcgaaggagtctaccctgatgtctttatgacaaacttatact 542 Query: 428 atggaggcacaagaattgcaggttctaaaattgtttttgcaaatggctctcaagacccat 487 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 543 atggaggcacaggaattgcaggttctaaaattgtttttgcaaatggatctcaagacccat 602 Query: 488 ggcgccatgcttctaagcagaaatcatcggaagaactgccatcatacttaattgagtgca 547 ||||||| |||||||||||||||||||| || ||| ||||||||||| |||||||||||| Sbjct: 603 ggcgccacgcttctaagcagaaatcatcagacgaattgccatcatacctaattgagtgca 662 Query: 548 gcaactgcgggcattgcactgatatctccggatgccctcaagcaccttcaaatattgaag 607 |||||||| || |||| |||| |||| |||||||||||||| |||||||| ||||||| Sbjct: 663 agaactgcggacactgcagtgatctctctggatgccctcaagctccttcaaacattgaag 722 Query: 608 gtgattcatccaaatgctcatccccagaagcagtgaacaaagtaaggaagcagatcgtgg 667 ||||||||||||| |||||| | || ||||| ||||||||||||||||| |||| || | Sbjct: 723 gtgattcatccaagtgctcacctcccgaagctctgaacaaagtaaggaaggagattgtcg 782 Query: 668 atcacat 674 ||||||| Sbjct: 783 atcacat 789
>gb|BT024005.1| Zea mays clone EL01N0403G06 mRNA sequence Length = 1602 Score = 680 bits (343), Expect = 0.0 Identities = 586/667 (87%) Strand = Plus / Plus Query: 8 tgtttggagcaaaaatgttagaaaatgatggtgacttcctttacctactagcagacgctg 67 |||||||||| | || |||||||||||||||||||||||| ||| |||| ||||| |||| Sbjct: 621 tgtttggagcgacaaagttagaaaatgatggtgacttcctctacttactggcagatgctg 680 Query: 68 cagctattgcgttccaatatggcaatcctgatgttttgtgctccccactagttgaagcaa 127 | |||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||| Sbjct: 681 ctgctattgcgttccaatatggtaatcctgatgtcttgtgctccccactagctgaagcaa 740 Query: 128 agaagaatggtacggatttggtggaagcatttgctcattacgtgaacagttattatgtcg 187 |||||||||| || |||||||||||| |||||||| ||||||||| |||||| | | Sbjct: 741 agaagaatgggacagatttggtggaaacatttgctagttacgtgaaagattattacattg 800 Query: 188 ggagatttaaggcatcagttgcatcatatgatcagaagtatttgaagaacacaactccag 247 | | |||| ||| ||||| ||||||||||||||| | |||||||||||||||||||| | Sbjct: 801 gaaaatttggggcgtcagtagcatcatatgatcagcaatatttgaagaacacaactcctg 860 Query: 248 ctgaatcttcatatagattgtggtggtatcaagtttgcagtgaggtttcatatttccaag 307 ||||||| ||||||||| | |||||||| |||||||||||||||||| |||||||||| | Sbjct: 861 ctgaatcctcatatagactatggtggtaccaagtttgcagtgaggttgcatatttccagg 920 Query: 308 tggcaccaaaaaatgatagcgtccgctctacaaagatcgatacaagataccatttagact 367 ||||||||||||| ||||| || || || |||||||||| || || |||||||| |||| Sbjct: 921 tggcaccaaaaaacgatagtgttcgttccccaaagatcgacacgaggtaccatttggact 980 Query: 368 tgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatgacaaacttatact 427 |||||| ||||||| | || |||||||| || |||||||| | |||||||||||||||| Sbjct: 981 tgtgcagaaatgttctcggcgaaggagtctaccctgatgtctttatgacaaacttatact 1040 Query: 428 atggaggcacaagaattgcaggttctaaaattgtttttgcaaatggctctcaagacccat 487 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1041 atggaggcacaggaattgcaggttctaaaattgtttttgcaaatggatctcaagacccat 1100 Query: 488 ggcgccatgcttctaagcagaaatcatcggaagaactgccatcatacttaattgagtgca 547 ||||||| |||||||||||||||||||| || ||| ||||||||||| |||||||||||| Sbjct: 1101 ggcgccacgcttctaagcagaaatcatcagacgaattgccatcatacctaattgagtgca 1160 Query: 548 gcaactgcgggcattgcactgatatctccggatgccctcaagcaccttcaaatattgaag 607 |||||||| || |||| |||| |||| |||||||||||||| |||||||| ||||||| Sbjct: 1161 agaactgcggacactgcagtgatctctctggatgccctcaagctccttcaaacattgaag 1220 Query: 608 gtgattcatccaaatgctcatccccagaagcagtgaacaaagtaaggaagcagatcgtgg 667 ||||||||||||| |||||| | || ||||| ||||||||||||||||| |||| || | Sbjct: 1221 gtgattcatccaagtgctcacctcccgaagctctgaacaaagtaaggaaggagattgtcg 1280 Query: 668 atcacat 674 ||||||| Sbjct: 1281 atcacat 1287
>ref|NM_197308.1| Oryza sativa (japonica cultivar-group) putative serine peptidase (OSJNBa0055O03.7), mRNA Length = 2369 Score = 668 bits (337), Expect = 0.0 Identities = 591/676 (87%), Gaps = 6/676 (0%) Strand = Plus / Plus Query: 5 aactgtttggagcaaaaatgttagaaaatgatggtgacttcctttacctactagcagacg 64 |||| ||||||||| || ||||| |||||||||||||||||| | ||||| || || | Sbjct: 1280 aactctttggagcatcaacgttagcaaatgatggtgacttcctctttctactggcggatg 1339 Query: 65 ctgcagctattgcgttccaatatggcaatcctgatgttttgtgctccccactagttgaag 124 | |||||||||||||||||||| || |||||||||| ||||||||||||| ||||||||| Sbjct: 1340 cagcagctattgcgttccaatacggtaatcctgatgctttgtgctccccaatagttgaag 1399 Query: 125 caaagaagaatggtacggatttggtggaagcatttgctcattacgtgaacagttattatg 184 ||||||||||||| || |||||||||||| ||||||||| || ||||| |||||| Sbjct: 1400 caaagaagaatggcacagatttggtggaaacatttgctcgctatgtgaaagattattaca 1459 Query: 185 tcgggagatttaaggcatcagttgcatcatatgatcagaagtatttgaagaacacaactc 244 | || | |||| ||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 1460 taggaacatttggagcatcagttgcatcatatgatcaagaatatttgaagaacacaactc 1519 Query: 245 ca------gctgaatcttcatatagattgtggtggtatcaagtttgcagtgaggtttcat 298 || ||||||||| ||||||| || |||||||| |||||||||||||| ||| ||| Sbjct: 1520 cacctcctgctgaatctgcatataggttatggtggtaccaagtttgcagtgaagttgcat 1579 Query: 299 atttccaagtggcaccaaaaaatgatagcgtccgctctacaaagatcgatacaagatacc 358 ||||||||||||| |||||||||||||| ||||| ||| ||||||| || ||||| |||| Sbjct: 1580 atttccaagtggctccaaaaaatgatagtgtccgttctgcaaagattgacacaaggtacc 1639 Query: 359 atttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatgacaa 418 |||| |||||||||| |||||||||||||||||||||||| |||||||| | |||||||| Sbjct: 1640 atttggacttgtgcagaaatgtttttggggaaggagtttaccctgatgtattcatgacaa 1699 Query: 419 acttatactatggaggcacaagaattgcaggttctaaaattgtttttgcaaatggctctc 478 | |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 1700 atttatactatggaggcacaagaattgcaggttcgaaaattgtttttgcaaacggctctc 1759 Query: 479 aagacccatggcgccatgcttctaagcagaaatcatcggaagaactgccatcatacttaa 538 |||| |||||||||||||||||||||||||||||||| ||||| |||| |||||||||| Sbjct: 1760 aagatccatggcgccatgcttctaagcagaaatcatcaaaagaattgccgtcatacttaa 1819 Query: 539 ttgagtgcagcaactgcgggcattgcactgatatctccggatgccctcaagcaccttcaa 598 ||||||||||||| ||||| ||||||| |||| | || |||||||||||||| |||||| Sbjct: 1820 ttgagtgcagcaattgcggacattgcagtgatctatctggatgccctcaagctccttcac 1879 Query: 599 atattgaaggtgattcatccaaatgctcatccccagaagcagtgaacaaagtaaggaagc 658 ||||||||||||| || || || || ||||| |||||||| |||||||||||||| |||| Sbjct: 1880 atattgaaggtgactcgtctaattgttcatctccagaagctgtgaacaaagtaagaaagc 1939 Query: 659 agatcgtggatcacat 674 ||||||| |||||||| Sbjct: 1940 agatcgtcgatcacat 1955
>dbj|AK070496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054G22, full insert sequence Length = 1986 Score = 668 bits (337), Expect = 0.0 Identities = 591/676 (87%), Gaps = 6/676 (0%) Strand = Plus / Plus Query: 5 aactgtttggagcaaaaatgttagaaaatgatggtgacttcctttacctactagcagacg 64 |||| ||||||||| || ||||| |||||||||||||||||| | ||||| || || | Sbjct: 885 aactctttggagcatcaacgttagcaaatgatggtgacttcctctttctactggcggatg 944 Query: 65 ctgcagctattgcgttccaatatggcaatcctgatgttttgtgctccccactagttgaag 124 | |||||||||||||||||||| || |||||||||| ||||||||||||| ||||||||| Sbjct: 945 cagcagctattgcgttccaatacggtaatcctgatgctttgtgctccccaatagttgaag 1004 Query: 125 caaagaagaatggtacggatttggtggaagcatttgctcattacgtgaacagttattatg 184 ||||||||||||| || |||||||||||| ||||||||| || ||||| |||||| Sbjct: 1005 caaagaagaatggcacagatttggtggaaacatttgctcgctatgtgaaagattattaca 1064 Query: 185 tcgggagatttaaggcatcagttgcatcatatgatcagaagtatttgaagaacacaactc 244 | || | |||| ||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 1065 taggaacatttggagcatcagttgcatcatatgatcaagaatatttgaagaacacaactc 1124 Query: 245 ca------gctgaatcttcatatagattgtggtggtatcaagtttgcagtgaggtttcat 298 || ||||||||| ||||||| || |||||||| |||||||||||||| ||| ||| Sbjct: 1125 cacctcctgctgaatctgcatataggttatggtggtaccaagtttgcagtgaagttgcat 1184 Query: 299 atttccaagtggcaccaaaaaatgatagcgtccgctctacaaagatcgatacaagatacc 358 ||||||||||||| |||||||||||||| ||||| ||| ||||||| || ||||| |||| Sbjct: 1185 atttccaagtggctccaaaaaatgatagtgtccgttctgcaaagattgacacaaggtacc 1244 Query: 359 atttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatgacaa 418 |||| |||||||||| |||||||||||||||||||||||| |||||||| | |||||||| Sbjct: 1245 atttggacttgtgcagaaatgtttttggggaaggagtttaccctgatgtattcatgacaa 1304 Query: 419 acttatactatggaggcacaagaattgcaggttctaaaattgtttttgcaaatggctctc 478 | |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 1305 atttatactatggaggcacaagaattgcaggttcgaaaattgtttttgcaaacggctctc 1364 Query: 479 aagacccatggcgccatgcttctaagcagaaatcatcggaagaactgccatcatacttaa 538 |||| |||||||||||||||||||||||||||||||| ||||| |||| |||||||||| Sbjct: 1365 aagatccatggcgccatgcttctaagcagaaatcatcaaaagaattgccgtcatacttaa 1424 Query: 539 ttgagtgcagcaactgcgggcattgcactgatatctccggatgccctcaagcaccttcaa 598 ||||||||||||| ||||| ||||||| |||| | || |||||||||||||| |||||| Sbjct: 1425 ttgagtgcagcaattgcggacattgcagtgatctatctggatgccctcaagctccttcac 1484 Query: 599 atattgaaggtgattcatccaaatgctcatccccagaagcagtgaacaaagtaaggaagc 658 ||||||||||||| || || || || ||||| |||||||| |||||||||||||| |||| Sbjct: 1485 atattgaaggtgactcgtctaattgttcatctccagaagctgtgaacaaagtaagaaagc 1544 Query: 659 agatcgtggatcacat 674 ||||||| |||||||| Sbjct: 1545 agatcgtcgatcacat 1560
>ref|NM_197310.1| Oryza sativa (japonica cultivar-group) putative serine peptidase (OSJNBa0055O03.8), mRNA Length = 1509 Score = 222 bits (112), Expect = 1e-54 Identities = 232/272 (85%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatgatagc 327 ||||||| |||||||||||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 1054 tggtggttccaagtttgcagtgaggttgcctattttcaagtggcacccaaaaacgatagc 1113 Query: 328 gtccgctctacaaagatcgatacaagataccatttagacttgtgcaaaaatgtttttggg 387 | ||||||||| ||||| ||||| | |||||||| ||| | |||| |||||| ||||| Sbjct: 1114 attcgctctacagagatcaatacagggtaccatttggacctatgcagaaatgtctttggt 1173 Query: 388 gaaggagtttatcctgatgtgtccatgacaaacttatactatggaggcacaagaattgca 447 ||||| |||||||||||||||| |||||||||||| || || ||||||||||||||||| Sbjct: 1174 gaaggtgtttatcctgatgtgttcatgacaaacttgtattacggaggcacaagaattgct 1233 Query: 448 ggttctaaaattgtttttgcaaatggctctcaagacccatggcgccatgcttctaagcag 507 | ||||||||| || || |||||||||||||||| |||||||||||||| || || ||| Sbjct: 1234 gcttctaaaatagtgttcacaaatggctctcaagatccatggcgccatgcctcgaaacag 1293 Query: 508 aaatcatcggaagaactgccatcatacttaat 539 ||||| ||| || | ||||||||||| |||| Sbjct: 1294 aaatcgtcgaaatatatgccatcatacataat 1325
>dbj|AK073197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022B10, full insert sequence Length = 2075 Score = 167 bits (84), Expect = 6e-38 Identities = 159/184 (86%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatgatagc 327 ||||||| |||||||||||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 1090 tggtggttccaagtttgcagtgaggttgcctattttcaagtggcacccaaaaacgatagc 1149 Query: 328 gtccgctctacaaagatcgatacaagataccatttagacttgtgcaaaaatgtttttggg 387 | ||||||||| ||||| ||||| | |||||||| ||| | |||| |||||| ||||| Sbjct: 1150 attcgctctacagagatcaatacagggtaccatttggacctatgcagaaatgtctttggt 1209 Query: 388 gaaggagtttatcctgatgtgtccatgacaaacttatactatggaggcacaagaattgca 447 ||||| |||||||||||||||| |||||||||||| || || ||||||||||||||||| Sbjct: 1210 gaaggtgtttatcctgatgtgttcatgacaaacttgtattacggaggcacaagaattgct 1269 Query: 448 ggtt 451 |||| Sbjct: 1270 ggtt 1273 Score = 71.9 bits (36), Expect = 3e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 444 tgcaggttctaaaattgtttttgcaaatggctctcaagacccatggcgccatgcttctaa 503 ||||| ||||||||| || || |||||||||||||||| |||||||||||||| || || Sbjct: 1560 tgcagcttctaaaatagtgttcacaaatggctctcaagatccatggcgccatgcctcgaa 1619 Query: 504 gcagaaatcatcggaagaactgccatcatacttaat 539 |||||||| ||| || | ||||||||||| |||| Sbjct: 1620 acagaaatcgtcgaaatatatgccatcatacataat 1655
>gb|AC073867.6| Oryza sativa chromosome 10 BAC OSJNBa0055O03 genomic sequence, complete sequence Length = 82909 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 355 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 414 |||||||| |||||||||| |||||||||||||||||||||||| |||||||| | |||| Sbjct: 13779 taccatttggacttgtgcagaaatgtttttggggaaggagtttaccctgatgtattcatg 13838 Query: 415 acaaacttatactatggaggcacaagaattgcaggt 450 ||||| |||||||||||||||||||||||||||||| Sbjct: 13839 acaaatttatactatggaggcacaagaattgcaggt 13874 Score = 119 bits (60), Expect = 1e-23 Identities = 69/72 (95%) Strand = Plus / Plus Query: 444 tgcaggttctaaaattgtttttgcaaatggctctcaagacccatggcgccatgcttctaa 503 ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 14432 tgcaggttcgaaaattgtttttgcaaacggctctcaagatccatggcgccatgcttctaa 14491 Query: 504 gcagaaatcatc 515 |||||||||||| Sbjct: 14492 gcagaaatcatc 14503 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 257 catatagattgtggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaa 316 ||||||| || |||||||| |||||||||||||| ||| |||||||||||||||| |||| Sbjct: 13532 catataggttatggtggtaccaagtttgcagtgaagttgcatatttccaagtggctccaa 13591 Query: 317 aaaatgatagcgtccgctctacaaagatcgatacaag 353 |||||||||| ||||| ||| ||||||| || ||||| Sbjct: 13592 aaaatgatagtgtccgttctgcaaagattgacacaag 13628 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 524 tgccatcatacttaattgagtgcagcaactgcgggcattgcactgatatctccggatgcc 583 |||| ||||||||||||||||||||||| ||||| ||||||| |||| | || ||||||| Sbjct: 14651 tgccgtcatacttaattgagtgcagcaattgcggacattgcagtgatctatctggatgcc 14710 Query: 584 ctcaagcaccttcaaatattgaaggt 609 ||||||| |||||| ||||||||||| Sbjct: 14711 ctcaagctccttcacatattgaaggt 14736 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 78 gttccaatatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatgg 137 ||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 13004 gttccaatacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatgg 13063 Query: 138 tacggatttggtgg 151 || |||||||||| Sbjct: 13064 cacagatttggtgg 13077 Score = 97.6 bits (49), Expect = 5e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 355 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 414 |||||||| ||| | |||| |||||| ||||| ||||| |||||||||||||||| |||| Sbjct: 23435 taccatttggacctatgcagaaatgtctttggtgaaggtgtttatcctgatgtgttcatg 23494 Query: 415 acaaacttatactatggaggcacaagaattgcaggtt 451 |||||||| || || ||||||||||||||||| |||| Sbjct: 23495 acaaacttgtattacggaggcacaagaattgctggtt 23531 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatgatagc 327 ||||||| |||||||||||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 23013 tggtggttccaagtttgcagtgaggttgcctattttcaagtggcacccaaaaacgatagc 23072 Query: 328 gtccgctctacaaagatcgataca 351 | ||||||||| ||||| ||||| Sbjct: 23073 attcgctctacagagatcaataca 23096 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 199 gcatcagttgcatcatatgatcagaagtatttgaagaacacaactcca 246 ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 13339 gcatcagttgcatcatatgatcaagaatatttgaagaacacaactcca 13386 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 625 tcatccccagaagcagtgaacaaagtaaggaagcagatcgtggatcacat 674 ||||| |||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 14963 tcatctccagaagctgtgaacaaagtaagaaagcagatcgtcgatcacat 15012 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 444 tgcaggttctaaaattgtttttgcaaatggctctcaagacccatggcgccatgcttctaa 503 ||||| ||||||||| || || |||||||||||||||| |||||||||||||| || || Sbjct: 23818 tgcagcttctaaaatagtgttcacaaatggctctcaagatccatggcgccatgcctcgaa 23877 Query: 504 gcagaaatc 512 |||||||| Sbjct: 23878 acagaaatc 23886 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 24 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcg 78 ||||| |||||||||||||||||| | ||||| || || || |||||||||||| Sbjct: 12871 gttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcg 12925
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 355 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 414 |||||||| |||||||||| |||||||||||||||||||||||| |||||||| | |||| Sbjct: 19161435 taccatttggacttgtgcagaaatgtttttggggaaggagtttaccctgatgtattcatg 19161494 Query: 415 acaaacttatactatggaggcacaagaattgcaggt 450 ||||| |||||||||||||||||||||||||||||| Sbjct: 19161495 acaaatttatactatggaggcacaagaattgcaggt 19161530 Score = 119 bits (60), Expect = 1e-23 Identities = 69/72 (95%) Strand = Plus / Plus Query: 444 tgcaggttctaaaattgtttttgcaaatggctctcaagacccatggcgccatgcttctaa 503 ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 19162088 tgcaggttcgaaaattgtttttgcaaacggctctcaagatccatggcgccatgcttctaa 19162147 Query: 504 gcagaaatcatc 515 |||||||||||| Sbjct: 19162148 gcagaaatcatc 19162159 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 257 catatagattgtggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaa 316 ||||||| || |||||||| |||||||||||||| ||| |||||||||||||||| |||| Sbjct: 19161188 catataggttatggtggtaccaagtttgcagtgaagttgcatatttccaagtggctccaa 19161247 Query: 317 aaaatgatagcgtccgctctacaaagatcgatacaag 353 |||||||||| ||||| ||| ||||||| || ||||| Sbjct: 19161248 aaaatgatagtgtccgttctgcaaagattgacacaag 19161284 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 524 tgccatcatacttaattgagtgcagcaactgcgggcattgcactgatatctccggatgcc 583 |||| ||||||||||||||||||||||| ||||| ||||||| |||| | || ||||||| Sbjct: 19162307 tgccgtcatacttaattgagtgcagcaattgcggacattgcagtgatctatctggatgcc 19162366 Query: 584 ctcaagcaccttcaaatattgaaggt 609 ||||||| |||||| ||||||||||| Sbjct: 19162367 ctcaagctccttcacatattgaaggt 19162392 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 78 gttccaatatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatgg 137 ||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 19160660 gttccaatacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatgg 19160719 Query: 138 tacggatttggtgg 151 || |||||||||| Sbjct: 19160720 cacagatttggtgg 19160733 Score = 97.6 bits (49), Expect = 5e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 355 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 414 |||||||| ||| | |||| |||||| ||||| ||||| |||||||||||||||| |||| Sbjct: 19171091 taccatttggacctatgcagaaatgtctttggtgaaggtgtttatcctgatgtgttcatg 19171150 Query: 415 acaaacttatactatggaggcacaagaattgcaggtt 451 |||||||| || || ||||||||||||||||| |||| Sbjct: 19171151 acaaacttgtattacggaggcacaagaattgctggtt 19171187 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatgatagc 327 ||||||| |||||||||||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 19170669 tggtggttccaagtttgcagtgaggttgcctattttcaagtggcacccaaaaacgatagc 19170728 Query: 328 gtccgctctacaaagatcgataca 351 | ||||||||| ||||| ||||| Sbjct: 19170729 attcgctctacagagatcaataca 19170752 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 199 gcatcagttgcatcatatgatcagaagtatttgaagaacacaactcca 246 ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 19160995 gcatcagttgcatcatatgatcaagaatatttgaagaacacaactcca 19161042 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 625 tcatccccagaagcagtgaacaaagtaaggaagcagatcgtggatcacat 674 ||||| |||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 19162619 tcatctccagaagctgtgaacaaagtaagaaagcagatcgtcgatcacat 19162668 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 444 tgcaggttctaaaattgtttttgcaaatggctctcaagacccatggcgccatgcttctaa 503 ||||| ||||||||| || || |||||||||||||||| |||||||||||||| || || Sbjct: 19171474 tgcagcttctaaaatagtgttcacaaatggctctcaagatccatggcgccatgcctcgaa 19171533 Query: 504 gcagaaatc 512 |||||||| Sbjct: 19171534 acagaaatc 19171542 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 24 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcg 78 ||||| |||||||||||||||||| | ||||| || || || |||||||||||| Sbjct: 19160527 gttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcg 19160581
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 355 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 414 |||||||| |||||||||| |||||||||||||||||||||||| |||||||| | |||| Sbjct: 19172711 taccatttggacttgtgcagaaatgtttttggggaaggagtttaccctgatgtattcatg 19172770 Query: 415 acaaacttatactatggaggcacaagaattgcaggt 450 ||||| |||||||||||||||||||||||||||||| Sbjct: 19172771 acaaatttatactatggaggcacaagaattgcaggt 19172806 Score = 119 bits (60), Expect = 1e-23 Identities = 69/72 (95%) Strand = Plus / Plus Query: 444 tgcaggttctaaaattgtttttgcaaatggctctcaagacccatggcgccatgcttctaa 503 ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 19173364 tgcaggttcgaaaattgtttttgcaaacggctctcaagatccatggcgccatgcttctaa 19173423 Query: 504 gcagaaatcatc 515 |||||||||||| Sbjct: 19173424 gcagaaatcatc 19173435 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 257 catatagattgtggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaa 316 ||||||| || |||||||| |||||||||||||| ||| |||||||||||||||| |||| Sbjct: 19172464 catataggttatggtggtaccaagtttgcagtgaagttgcatatttccaagtggctccaa 19172523 Query: 317 aaaatgatagcgtccgctctacaaagatcgatacaag 353 |||||||||| ||||| ||| ||||||| || ||||| Sbjct: 19172524 aaaatgatagtgtccgttctgcaaagattgacacaag 19172560 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 524 tgccatcatacttaattgagtgcagcaactgcgggcattgcactgatatctccggatgcc 583 |||| ||||||||||||||||||||||| ||||| ||||||| |||| | || ||||||| Sbjct: 19173583 tgccgtcatacttaattgagtgcagcaattgcggacattgcagtgatctatctggatgcc 19173642 Query: 584 ctcaagcaccttcaaatattgaaggt 609 ||||||| |||||| ||||||||||| Sbjct: 19173643 ctcaagctccttcacatattgaaggt 19173668 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 78 gttccaatatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatgg 137 ||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 19171936 gttccaatacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatgg 19171995 Query: 138 tacggatttggtgg 151 || |||||||||| Sbjct: 19171996 cacagatttggtgg 19172009 Score = 97.6 bits (49), Expect = 5e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 355 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 414 |||||||| ||| | |||| |||||| ||||| ||||| |||||||||||||||| |||| Sbjct: 19182367 taccatttggacctatgcagaaatgtctttggtgaaggtgtttatcctgatgtgttcatg 19182426 Query: 415 acaaacttatactatggaggcacaagaattgcaggtt 451 |||||||| || || ||||||||||||||||| |||| Sbjct: 19182427 acaaacttgtattacggaggcacaagaattgctggtt 19182463 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatgatagc 327 ||||||| |||||||||||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 19181945 tggtggttccaagtttgcagtgaggttgcctattttcaagtggcacccaaaaacgatagc 19182004 Query: 328 gtccgctctacaaagatcgataca 351 | ||||||||| ||||| ||||| Sbjct: 19182005 attcgctctacagagatcaataca 19182028 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 199 gcatcagttgcatcatatgatcagaagtatttgaagaacacaactcca 246 ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 19172271 gcatcagttgcatcatatgatcaagaatatttgaagaacacaactcca 19172318 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 625 tcatccccagaagcagtgaacaaagtaaggaagcagatcgtggatcacat 674 ||||| |||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 19173895 tcatctccagaagctgtgaacaaagtaagaaagcagatcgtcgatcacat 19173944 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 444 tgcaggttctaaaattgtttttgcaaatggctctcaagacccatggcgccatgcttctaa 503 ||||| ||||||||| || || |||||||||||||||| |||||||||||||| || || Sbjct: 19182750 tgcagcttctaaaatagtgttcacaaatggctctcaagatccatggcgccatgcctcgaa 19182809 Query: 504 gcagaaatc 512 |||||||| Sbjct: 19182810 acagaaatc 19182818 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 24 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcg 78 ||||| |||||||||||||||||| | ||||| || || || |||||||||||| Sbjct: 19171803 gttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcg 19171857
>gb|AC087192.14| Oryza sativa chromosome 10 BAC OSJNBa0005K07 genomic sequence, complete sequence Length = 113606 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 78 gttccaatatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatgg 137 ||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 113231 gttccaatacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatgg 113290 Query: 138 tacggatttggtgg 151 || |||||||||| Sbjct: 113291 cacagatttggtgg 113304 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 199 gcatcagttgcatcatatgatcagaagtatttgaagaacac 239 ||||||||||||||||||||||| | |||||||||||||| Sbjct: 113566 gcatcagttgcatcatatgatcaagaatatttgaagaacac 113606 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 24 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcg 78 ||||| |||||||||||||||||| | ||||| || || || |||||||||||| Sbjct: 113098 gttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcg 113152
>ref|NM_001036718.1| Arabidopsis thaliana catalytic/ serine-type peptidase AT4G36195 transcript variant AT4G36195.2 mRNA, complete cds Length = 1663 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1101 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1147
>ref|NM_119787.2| Arabidopsis thaliana catalytic/ serine-type peptidase AT4G36195 transcript variant AT4G36195.1 mRNA, complete cds Length = 1700 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1101 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1147
>gb|AY133877.1| Arabidopsis thaliana clone U09999 unknown protein (At4g36195) mRNA, complete cds Length = 1498 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1012 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1058
>gb|AY034960.1| Arabidopsis thaliana unknown protein (At4g36195) mRNA, complete cds Length = 1713 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1101 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1147
>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85 Length = 198750 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 10236 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 10282
>emb|AL022141.1|ATF23E13 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E13 (ESSAII project) Length = 94695 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 33515 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 33561
>emb|BX827415.1|CNS0A2UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1630 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1041 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1087
>emb|BX829098.1|CNS0A2LR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1580 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1036 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1082
>emb|BX827322.1|CNS0A2RU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS39ZG03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1592 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1038 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1084
>dbj|AK176387.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL24-09-P10 Length = 1665 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1057 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1103
>dbj|AK176292.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL23-23-H16 Length = 1654 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1048 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1094
>dbj|AK176216.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL23-09-N18 Length = 1627 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1048 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1094
>dbj|AK176095.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL22-87-D20 Length = 1656 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1068 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1114
>dbj|AK176051.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL22-79-J12 Length = 1656 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1068 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1114
>dbj|AK176014.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL22-71-M08 Length = 1656 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1068 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1114
>dbj|AK175200.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, partial cds, clone: RAFL21-61-O17 Length = 1544 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 935 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 981
>dbj|AK175158.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL21-57-M09 Length = 1618 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 268 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 314 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1048 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1094
>ref|NM_127364.1| Arabidopsis thaliana serine-type peptidase AT2G18080 mRNA, complete cds Length = 1101 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gttgaagcaaagaagaatggta 139 |||||||||||||||||||||| Sbjct: 490 gttgaagcaaagaagaatggta 511
>gb|DQ446516.1| Arabidopsis thaliana clone pENTR221-At2g18080 serine carboxypeptidase S28 family protein (At2g18080) mRNA, complete cds Length = 1254 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gttgaagcaaagaagaatggta 139 |||||||||||||||||||||| Sbjct: 646 gttgaagcaaagaagaatggta 667
>gb|AC006201.4| Arabidopsis thaliana chromosome 2 clone T27K22 map c245, complete sequence Length = 88149 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 gttgaagcaaagaagaatggta 139 |||||||||||||||||||||| Sbjct: 17229 gttgaagcaaagaagaatggta 17208
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 453 taaaattgtttttgcaaatggc 474 |||||||||||||||||||||| Sbjct: 6262315 taaaattgtttttgcaaatggc 6262294
>emb|AL442108.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124E07, complete sequence Length = 127181 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 453 taaaattgtttttgcaaatggc 474 |||||||||||||||||||||| Sbjct: 34866 taaaattgtttttgcaaatggc 34845
>emb|AL606989.3|OSJN00120 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033G08, complete sequence Length = 121591 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 453 taaaattgtttttgcaaatggc 474 |||||||||||||||||||||| Sbjct: 31981 taaaattgtttttgcaaatggc 31960
>gb|AC129162.5| Rattus norvegicus 9 BAC CH230-108L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 245677 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 ttctaaaattgtttttgcaaa 470 ||||||||||||||||||||| Sbjct: 15017 ttctaaaattgtttttgcaaa 15037
>gb|AF526789.1| HIV-1 isolate E2587C1 from Senegal envelope glycoprotein (env) gene, partial cds Length = 339 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 gaagtatttgaagaacacaac 242 ||||||||||||||||||||| Sbjct: 297 gaagtatttgaagaacacaac 317
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 caagaattgcaggttctaaaa 457 ||||||||||||||||||||| Sbjct: 1109020 caagaattgcaggttctaaaa 1109040
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 gttctaaaattgtttttgcaa 469 ||||||||||||||||||||| Sbjct: 2086709 gttctaaaattgtttttgcaa 2086729
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 636 agcagtgaacaaagtaaggaa 656 ||||||||||||||||||||| Sbjct: 13725471 agcagtgaacaaagtaaggaa 13725491
>emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa0042B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145118 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 636 agcagtgaacaaagtaaggaa 656 ||||||||||||||||||||| Sbjct: 59072 agcagtgaacaaagtaaggaa 59092
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 gttctaaaattgtttttgcaa 469 ||||||||||||||||||||| Sbjct: 2195748 gttctaaaattgtttttgcaa 2195728
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 636 agcagtgaacaaagtaaggaa 656 ||||||||||||||||||||| Sbjct: 13679751 agcagtgaacaaagtaaggaa 13679771
>emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G11 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155451 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 636 agcagtgaacaaagtaaggaa 656 ||||||||||||||||||||| Sbjct: 41130 agcagtgaacaaagtaaggaa 41150
>ref|NM_112394.2| Arabidopsis thaliana unknown protein AT3G15310 mRNA, complete cds Length = 1544 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tagttgaagcaaagaagaat 135 |||||||||||||||||||| Sbjct: 40 tagttgaagcaaagaagaat 21
>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217496 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 caatcctgatgttttgtgct 109 |||||||||||||||||||| Sbjct: 156266 caatcctgatgttttgtgct 156247
>gb|AC140724.4| Mus musculus chromosome 8, clone RP24-291N1, complete sequence Length = 159182 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 aggtttcatatttccaagtg 309 |||||||||||||||||||| Sbjct: 73361 aggtttcatatttccaagtg 73342
>gb|AC161229.10| Mus musculus chromosome 7, clone RP24-88J19, complete sequence Length = 189105 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tatgatcagaagtatttgaa 233 |||||||||||||||||||| Sbjct: 107966 tatgatcagaagtatttgaa 107947
>gb|AC183987.3| Pan troglodytes BAC clone CH251-265I5 from chromosome 6, complete sequence Length = 162913 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 ttgcatcatatgatcagaagtatt 229 |||||| ||||||||||||||||| Sbjct: 102539 ttgcataatatgatcagaagtatt 102562
>emb|CR626875.10| Zebrafish DNA sequence from clone DKEY-31J4 in linkage group 15, complete sequence Length = 212742 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 agcaaaaatgttagaaaatg 34 |||||||||||||||||||| Sbjct: 64430 agcaaaaatgttagaaaatg 64449
>gb|AC134323.3| Mus musculus BAC clone RP24-512P7 from chromosome 8, complete sequence Length = 176667 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 aggtttcatatttccaagtg 309 |||||||||||||||||||| Sbjct: 157133 aggtttcatatttccaagtg 157152
>gb|AC132473.3| Mus musculus BAC clone RP23-114F11 from chromosome 8, complete sequence Length = 162027 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 atcctgatgttttgtgctcc 111 |||||||||||||||||||| Sbjct: 85438 atcctgatgttttgtgctcc 85457
>ref|XM_660281.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.80241) partial mRNA Length = 1506 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tgcatcatatgatcagaagtattt 230 ||||||||||||| |||||||||| Sbjct: 282 tgcatcatatgatgagaagtattt 259
>gb|AC108554.8| Rattus norvegicus 7 BAC CH230-81L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 157107 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 tgcaggttctaaaattgtttttgc 467 |||||||||||| ||||||||||| Sbjct: 61301 tgcaggttctaatattgtttttgc 61324
>emb|AL390237.9| Human DNA sequence from clone RP11-278J20 on chromosome 6 Contains a retinoblastoma binding protein 4 (RBBP4) pseudogene and a KIAA0797 pseudogene, complete sequence Length = 140120 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 ttgcatcatatgatcagaagtatt 229 |||||| ||||||||||||||||| Sbjct: 55447 ttgcataatatgatcagaagtatt 55424
>emb|AL354985.16| Human DNA sequence from clone RP11-493B21 on chromosome 13, complete sequence Length = 139927 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 agcaaaaatgttagaaaatg 34 |||||||||||||||||||| Sbjct: 28503 agcaaaaatgttagaaaatg 28522
>emb|AL049745.9|HSJ654H19 Human DNA sequence from clone RP4-654H19 on chromosome 1p31.1-33 Contains the 5' end of the gene for likely ortholog of mouse Gli-similar 1 Kruppel-like zinc finger (Glia1) (FLJ36155), a novel gene (FLJ10407), a ribosomal protein L37 (RPL37) pseudogene and a CpG island, complete sequence Length = 117493 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ttggagcaaaaatgttagaa 30 |||||||||||||||||||| Sbjct: 17475 ttggagcaaaaatgttagaa 17494
>gb|AY050876.1| Arabidopsis thaliana unknown protein (At3g15310) mRNA, complete cds Length = 1545 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tagttgaagcaaagaagaat 135 |||||||||||||||||||| Sbjct: 40 tagttgaagcaaagaagaat 21
>emb|CR457462.13| Zebrafish DNA sequence from clone CH211-1O7 in linkage group 13, complete sequence Length = 166823 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 agacttgtgcaaaaatgttt 382 |||||||||||||||||||| Sbjct: 58414 agacttgtgcaaaaatgttt 58433
>gb|AC063923.21| Homo sapiens 3 BAC RP11-59E19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153448 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 taaaattgtttttgcaaatg 472 |||||||||||||||||||| Sbjct: 53884 taaaattgtttttgcaaatg 53903
>gb|AC008114.25| Homo sapiens 12 BAC RP11-502N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 126503 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 agacttgtgcaaaaatgttt 382 |||||||||||||||||||| Sbjct: 47695 agacttgtgcaaaaatgttt 47714
>emb|CR847543.13| Zebrafish DNA sequence from clone DKEY-183P4 in linkage group 8, complete sequence Length = 207382 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 ctaaaattgtttttgcaaat 471 |||||||||||||||||||| Sbjct: 89915 ctaaaattgtttttgcaaat 89934
>emb|BX927364.4| Zebrafish DNA sequence from clone CH211-20H7 in linkage group 14, complete sequence Length = 94162 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 aaaatgatggtgacttcctttacc 52 |||| ||||||||||||||||||| Sbjct: 13433 aaaaagatggtgacttcctttacc 13456
>ref|XM_627109.1| Cryptosporidium parvum Iowa II RRP5 like protein involved in rRNA biogenesis (cgd8_2050), partial mRNA Length = 6009 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tgcatcatatgatcagaagtattt 230 ||||||||||||| |||||||||| Sbjct: 1494 tgcatcatatgatgagaagtattt 1471
>gb|AC158678.6| Mus musculus 6 BAC RP23-142I6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217586 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 caatcctgatgttttgtgct 109 |||||||||||||||||||| Sbjct: 146963 caatcctgatgttttgtgct 146982
>emb|BX548012.11| Zebrafish DNA sequence from clone DKEY-271O4 in linkage group 18, complete sequence Length = 154557 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 agaagtatttgaagaacaca 240 |||||||||||||||||||| Sbjct: 94044 agaagtatttgaagaacaca 94025
>emb|BX825615.1|CNS0A4XP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL49ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tagttgaagcaaagaagaat 135 |||||||||||||||||||| Sbjct: 26 tagttgaagcaaagaagaat 7
>ref|XM_215497.3| PREDICTED: Rattus norvegicus RAD1 homolog (S. pombe) (predicted) (Rad1_predicted), mRNA Length = 972 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggatttggtggaagcattt 159 |||||||||||||||||||| Sbjct: 749 cggatttggtggaagcattt 768
>gb|AF296826.1|F15I15 Arabidopsis thaliana BAC F15I15 Length = 93896 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tagttgaagcaaagaagaat 135 |||||||||||||||||||| Sbjct: 29491 tagttgaagcaaagaagaat 29472
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 40.1 bits (20), Expect = 9.3 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 215 atgatcagaa-gtatttgaagaacacaa 241 |||||||||| ||||||||||||||||| Sbjct: 3929 atgatcagaacgtatttgaagaacacaa 3956
>dbj|AP000413.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K7L4 Length = 65047 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tagttgaagcaaagaagaat 135 |||||||||||||||||||| Sbjct: 33094 tagttgaagcaaagaagaat 33113
>dbj|AB046435.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F15I15 Length = 93896 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tagttgaagcaaagaagaat 135 |||||||||||||||||||| Sbjct: 29491 tagttgaagcaaagaagaat 29472
>dbj|AB012248.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI22 Length = 80115 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 ctgaatcttcatatagattgtggt 271 ||||||||||||||||||| |||| Sbjct: 15592 ctgaatcttcatatagattttggt 15569
>gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, complete sequence Length = 171846 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 catatttccaagtggcacca 315 |||||||||||||||||||| Sbjct: 53492 catatttccaagtggcacca 53473
>dbj|AP000651.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-88K4, complete sequences Length = 74994 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 atatgatcagaagtatttgaagaacaca 240 |||||||||||| |||||||| |||||| Sbjct: 27649 atatgatcagaaatatttgaataacaca 27622
>emb|BX293540.5| Zebrafish DNA sequence from clone DKEY-255N2 in linkage group 8, complete sequence Length = 181168 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 catttagacttgtgcaaaaa 377 |||||||||||||||||||| Sbjct: 129372 catttagacttgtgcaaaaa 129353
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 caagtggcaccaaaaaatga 323 |||||||||||||||||||| Sbjct: 2410975 caagtggcaccaaaaaatga 2410956
>emb|AJ311054.1|CPA311054 Chironomus pallidivittatus 4L ORF for putative recombinase subtelocentric clone, Cp5.5 Length = 5463 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aaaatgttagaaaatgatgg 38 |||||||||||||||||||| Sbjct: 4393 aaaatgttagaaaatgatgg 4412 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,847,442 Number of Sequences: 3902068 Number of extensions: 6847442 Number of successful extensions: 129918 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 129363 Number of HSP's gapped (non-prelim): 556 length of query: 677 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 654 effective length of database: 17,143,297,704 effective search space: 11211716698416 effective search space used: 11211716698416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)