>SYR_PYRFU (Q8U149) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA|
           ligase) (ArgRS)
          Length = 629

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 259 ENKPTCQTLALXYLEINQLLEPKLETKNQDKKIWKKKRER 140
           +N P    L L Y+E+N+ +E   E + + +++ KK  ER
Sbjct: 199 KNNPIDHVLGLLYVEVNKKIEESSEVEKEIRELMKKLEER 238

>HSP79_YEAST (P32590) Heat shock protein homolog SSE2|
          Length = 692

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = -1

Query: 247 TCQTLALXYLEINQLLEPKLETKNQDKKIWKKKRERCERTNLLD 116
           T +T AL  +E+N L+E + E +NQDK +     E  +R N L+
Sbjct: 535 TAKTFALNPVELNDLIEKENELRNQDKLV----AETEDRKNALE 574

>RIR1_EHV4 (P50642) Ribonucleoside-diphosphate reductase large chain (EC|
           1.17.4.1) (Ribonucleotide reductase)
          Length = 789

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 253 KPTCQTLALXYLEINQLLEPKLETKNQDKKIWKKKRE 143
           KP C+     Y+   +L+  +++ +N D K W K  E
Sbjct: 59  KPLCRVDERLYIACGELVHLRIKARNTDLKYWLKSSE 95

>Y3284_CLOAB (Q97E32) Hypothetical UPF0230 protein CAC3284|
          Length = 285

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 73  GMDGILVHHISCYGQ 29
           GM GI VHHI+CY +
Sbjct: 226 GMGGIAVHHINCYDE 240

>NCAP_IBVSA (Q8JMI6) Nucleocapsid protein (N structural protein) (NC)|
          Length = 409

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 305 TPPPQNEPRPTSLRGREQTHMSNTCLTXPRN*STPRTKT*NQKPRQKNMEKEER 144
           T P  +EP+P S                 R+ S P T+T +  PRQ+ ++KE+R
Sbjct: 329 TRPKDDEPKPKS-----------------RSSSRPATRTSSPAPRQQRLKKEKR 365

>NCAP_IBVG (P32923) Nucleocapsid protein (N structural protein) (NC)|
          Length = 409

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 305 TPPPQNEPRPTSLRGREQTHMSNTCLTXPRN*STPRTKT*NQKPRQKNMEKEER 144
           T P  +EP+P S                 R+ S P T+T +  PRQ+ ++KE+R
Sbjct: 329 TRPKDDEPKPKS-----------------RSSSRPATRTSSPAPRQQRLKKEKR 365

>RL24_ONYPE (P60743) 50S ribosomal protein L24|
          Length = 79

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 317 KLDHTPPPQNEPRPTSLRGREQTHMSNTCLTXPR 216
           K +  PP QNE + T ++     H+SN  L  P+
Sbjct: 15  KPNTNPPSQNEEKGTIVKQEAPIHVSNVALVCPQ 48

>AP23_ARATH (P42736) AP2 domain transcription factor RAP2.3 (Related to AP2|
           protein 3) (Cadmium-induced protein AS30)
          Length = 248

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 314 LDHTPPPQNEPRPTSLRGREQTHMSNTCL 228
           L H PPP   P P+S R  +Q      C+
Sbjct: 137 LHHPPPPNYTPPPSSPRSTDQPPAKKVCV 165

>US02_HHV2H (P13292) Protein US2|
          Length = 290

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = -3

Query: 296 PQNEPRPTSLRGREQTHMSN----TCLTXPRN*STPRTKT*NQKPR 171
           P N+PRP S R    TH +     TC+  P     P  +T +  P+
Sbjct: 220 PHNKPRPASSRPHPATHPTQRPCFTCMGRPEIPDEPSWQTGDDDPQ 265

>41_BOVIN (Q9N179) Protein 4.1 (Band 4.1) (P4.1) (4.1R)|
          Length = 617

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 220 LEINQLLEPKLETKNQDKKIWKKKRERCERTNL 122
           +E+ Q   P  + + +  + WKKKRER +  N+
Sbjct: 380 VEVKQEEAPPEDAEPEPSEAWKKKRERLDGENI 412


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,480,629
Number of Sequences: 219361
Number of extensions: 748463
Number of successful extensions: 2276
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2275
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)