ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags25k06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478799.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.018
2ref|XM_507376.1| PREDICTED Oryza sativa (japonica cultivar-group... 48 0.018
3ref|XM_506420.2| PREDICTED Oryza sativa (japonica cultivar-group... 48 0.018
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.018
5dbj|AK121705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.018
6dbj|AK119637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.018
7dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.018
8dbj|AK102732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.018
9dbj|AK065116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.018
10dbj|AK061739.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.018
11gb|AC148289.2| Medicago truncatula chromosome 7 BAC clone mth2-3... 46 0.070
12ref|XM_909095.2| PREDICTED: Mus musculus similar to armadillo re... 44 0.27
13gb|AC154548.3| Mus musculus BAC clone RP23-437N23 from chromosom... 42 1.1
14gb|U34207.1|PPU34207 Photobacterium phosphoreum methylenetetrahy... 42 1.1
15gb|AC127321.4| Mus musculus BAC clone RP23-231A8 from chromosome... 42 1.1
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
17dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
18dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
19gb|AC102535.17| Mus musculus chromosome 7, clone RP23-61O11, com... 40 4.3
20ref|NM_146691.1| Mus musculus olfactory receptor 1467 (Olfr1467)... 40 4.3
21gb|AC119857.10| Mus musculus chromosome 3, clone RP23-257A18, co... 40 4.3
22gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
23gb|AC102217.9| Mus musculus chromosome 1, clone RP24-160A23, com... 40 4.3
24gb|AY318686.1| Mus musculus olfactory receptor Olfr1467 (Olfr146... 40 4.3
25gb|AC131758.3| Mus musculus BAC clone RP24-211E5 from chromosome... 40 4.3
26gb|AC144725.16| Medicago truncatula clone mth2-7m17, complete se... 40 4.3
27emb|AL118509.9|HSJ770C23 Human DNA sequence from clone RP4-770C2... 40 4.3
28emb|BX640916.1|HSM807056 Homo sapiens mRNA; cDNA DKFZp667P1015 (... 40 4.3
29gb|AE016828.2| Coxiella burnetii RSA 493, complete genome 40 4.3
30emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 i... 40 4.3
31dbj|AK093175.1| Homo sapiens cDNA FLJ35856 fis, clone TESTI20071... 40 4.3
32gb|AY073404.1| Mus musculus olfactory receptor MOR202-15 gene, c... 40 4.3
33gb|AC073528.26|AC073528 Homo sapiens 12 BAC RP11-8P16 (Roswell P... 40 4.3
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
36gb|AC121761.4| Homo sapiens 12 BAC RP11-585P4 (Roswell Park Canc... 40 4.3
37gb|AC073907.25| Homo sapiens 12 BAC RP11-202G24 (Roswell Park Ca... 40 4.3
38dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
39gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, comp... 40 4.3
40gb|AC084416.36| Mus musculus strain C57BL/6J chromosome 5 clone ... 40 4.3
41gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3 
>ref|XM_478799.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1757

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 298  ggaggagtgtggtcaagtttctgaagag 325
            ||||||||| ||||||||||||||||||
Sbjct: 1577 ggaggagtgcggtcaagtttctgaagag 1604



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                
Query: 233  aagtgtttgacatgtggg-tttgttctctgcctcggagagatgttggtctgg 283
            ||||||||||||||||   |||||||||| ||||  ||||||||||||||||
Sbjct: 1521 aagtgtttgacatgtgaaatttgttctcttcctc--agagatgttggtctgg 1570
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>ref|XM_507376.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18 mRNA
          Length = 2418

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 298  ggaggagtgtggtcaagtttctgaagag 325
            ||||||||| ||||||||||||||||||
Sbjct: 1586 ggaggagtgcggtcaagtttctgaagag 1613



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                
Query: 233  aagtgtttgacatgtggg-tttgttctctgcctcggagagatgttggtctgg 283
            ||||||||||||||||   |||||||||| ||||  ||||||||||||||||
Sbjct: 1530 aagtgtttgacatgtgaaatttgttctcttcctc--agagatgttggtctgg 1579
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>ref|XM_506420.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18 mRNA
          Length = 1772

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 298  ggaggagtgtggtcaagtttctgaagag 325
            ||||||||| ||||||||||||||||||
Sbjct: 1719 ggaggagtgcggtcaagtttctgaagag 1746



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                
Query: 233  aagtgtttgacatgtggg-tttgttctctgcctcggagagatgttggtctgg 283
            ||||||||||||||||   |||||||||| ||||  ||||||||||||||||
Sbjct: 1663 aagtgtttgacatgtgaaatttgttctcttcctc--agagatgttggtctgg 1712
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 298      ggaggagtgtggtcaagtttctgaagag 325
                ||||||||| ||||||||||||||||||
Sbjct: 23128396 ggaggagtgcggtcaagtttctgaagag 23128423



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                    
Query: 233      aagtgtttgacatgtggg-tttgttctctgcctcggagagatgttggtctgg 283
                ||||||||||||||||   |||||||||| ||||  ||||||||||||||||
Sbjct: 23128340 aagtgtttgacatgtgaaatttgttctcttcctc--agagatgttggtctgg 23128389
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>dbj|AK121705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075B20, full
            insert sequence
          Length = 1786

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 298  ggaggagtgtggtcaagtttctgaagag 325
            ||||||||| ||||||||||||||||||
Sbjct: 1585 ggaggagtgcggtcaagtttctgaagag 1612



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                
Query: 233  aagtgtttgacatgtggg-tttgttctctgcctcggagagatgttggtctgg 283
            ||||||||||||||||   |||||||||| ||||  ||||||||||||||||
Sbjct: 1529 aagtgtttgacatgtgaaatttgttctcttcctc--agagatgttggtctgg 1578
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>dbj|AK119637.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F04, full
            insert sequence
          Length = 1765

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 298  ggaggagtgtggtcaagtttctgaagag 325
            ||||||||| ||||||||||||||||||
Sbjct: 1583 ggaggagtgcggtcaagtttctgaagag 1610



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                
Query: 233  aagtgtttgacatgtggg-tttgttctctgcctcggagagatgttggtctgg 283
            ||||||||||||||||   |||||||||| ||||  ||||||||||||||||
Sbjct: 1527 aagtgtttgacatgtgaaatttgttctcttcctc--agagatgttggtctgg 1576
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>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1699_E05
          Length = 170666

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 298   ggaggagtgtggtcaagtttctgaagag 325
             ||||||||| ||||||||||||||||||
Sbjct: 72580 ggaggagtgcggtcaagtttctgaagag 72607



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                 
Query: 233   aagtgtttgacatgtggg-tttgttctctgcctcggagagatgttggtctgg 283
             ||||||||||||||||   |||||||||| ||||  ||||||||||||||||
Sbjct: 72524 aagtgtttgacatgtgaaatttgttctcttcctc--agagatgttggtctgg 72573
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>dbj|AK102732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106A21, full
            insert sequence
          Length = 2417

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 298  ggaggagtgtggtcaagtttctgaagag 325
            ||||||||| ||||||||||||||||||
Sbjct: 1585 ggaggagtgcggtcaagtttctgaagag 1612



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                
Query: 233  aagtgtttgacatgtggg-tttgttctctgcctcggagagatgttggtctgg 283
            ||||||||||||||||   |||||||||| ||||  ||||||||||||||||
Sbjct: 1529 aagtgtttgacatgtgaaatttgttctcttcctc--agagatgttggtctgg 1578
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>dbj|AK065116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O09, full
            insert sequence
          Length = 1757

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 298  ggaggagtgtggtcaagtttctgaagag 325
            ||||||||| ||||||||||||||||||
Sbjct: 1577 ggaggagtgcggtcaagtttctgaagag 1604



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                
Query: 233  aagtgtttgacatgtggg-tttgttctctgcctcggagagatgttggtctgg 283
            ||||||||||||||||   |||||||||| ||||  ||||||||||||||||
Sbjct: 1521 aagtgtttgacatgtgaaatttgttctcttcctc--agagatgttggtctgg 1570
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>dbj|AK061739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E10, full
            insert sequence
          Length = 1772

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 298  ggaggagtgtggtcaagtttctgaagag 325
            ||||||||| ||||||||||||||||||
Sbjct: 1719 ggaggagtgcggtcaagtttctgaagag 1746



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 46/52 (88%), Gaps = 3/52 (5%)
 Strand = Plus / Plus

                                                                
Query: 233  aagtgtttgacatgtggg-tttgttctctgcctcggagagatgttggtctgg 283
            ||||||||||||||||   |||||||||| ||||  ||||||||||||||||
Sbjct: 1663 aagtgtttgacatgtgaaatttgttctcttcctc--agagatgttggtctgg 1712
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>gb|AC148289.2| Medicago truncatula chromosome 7 BAC clone mth2-36p20, complete
             sequence
          Length = 114452

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 136   cacacctctctctcttctttttc 158
             |||||||||||||||||||||||
Sbjct: 61641 cacacctctctctcttctttttc 61619
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>ref|XM_909095.2| PREDICTED: Mus musculus similar to armadillo repeat-containing
           protein (LOC634390), mRNA
          Length = 2255

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 238 tttgacatgtgggtttgttctc 259
           ||||||||||||||||||||||
Sbjct: 106 tttgacatgtgggtttgttctc 127
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>gb|AC154548.3| Mus musculus BAC clone RP23-437N23 from chromosome 13, complete
             sequence
          Length = 173722

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    aagaaatgtgatgaactaaaa 60
             |||||||||||||||||||||
Sbjct: 73561 aagaaatgtgatgaactaaaa 73541
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>gb|U34207.1|PPU34207 Photobacterium phosphoreum methylenetetrahydrofolate
           dehydrogenase-cyclohydrolase gene, complete cds
          Length = 970

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 51  tgaactaaaatgccatccatg 71
           |||||||||||||||||||||
Sbjct: 326 tgaactaaaatgccatccatg 306
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>gb|AC127321.4| Mus musculus BAC clone RP23-231A8 from chromosome 8, complete sequence
          Length = 220673

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 41     agaaatgtgatgaactaaaat 61
              |||||||||||||||||||||
Sbjct: 102896 agaaatgtgatgaactaaaat 102916
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 141      ctctctctcttctttttccat 161
                |||||||||||||||||||||
Sbjct: 24214667 ctctctctcttctttttccat 24214687
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>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2055_H10
          Length = 119290

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   ctctctctcttctttttccat 161
             |||||||||||||||||||||
Sbjct: 15055 ctctctctcttctttttccat 15075
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>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A05
          Length = 174290

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 141    ctctctctcttctttttccat 161
              |||||||||||||||||||||
Sbjct: 173408 ctctctctcttctttttccat 173428
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>gb|AC102535.17| Mus musculus chromosome 7, clone RP23-61O11, complete sequence
          Length = 220003

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   cctctctctcttctttttcc 159
             ||||||||||||||||||||
Sbjct: 82438 cctctctctcttctttttcc 82457
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>ref|NM_146691.1| Mus musculus olfactory receptor 1467 (Olfr1467), mRNA
          Length = 927

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 atagcaagaaatgtgatgaa 54
          ||||||||||||||||||||
Sbjct: 98 atagcaagaaatgtgatgaa 79
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>gb|AC119857.10| Mus musculus chromosome 3, clone RP23-257A18, complete sequence
          Length = 152106

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   cacctctctctcttcttttt 157
             ||||||||||||||||||||
Sbjct: 66647 cacctctctctcttcttttt 66666
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>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09,
              complete sequence
          Length = 168192

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 137    acacctctctctcttctttttcca 160
              ||||||||||||||| ||||||||
Sbjct: 123162 acacctctctctcttttttttcca 123139
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>gb|AC102217.9| Mus musculus chromosome 1, clone RP24-160A23, complete sequence
          Length = 214578

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   cctctctctcttctttttcc 159
             ||||||||||||||||||||
Sbjct: 56943 cctctctctcttctttttcc 56962
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>gb|AY318686.1| Mus musculus olfactory receptor Olfr1467 (Olfr1467) gene,
          complete cds
          Length = 927

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 atagcaagaaatgtgatgaa 54
          ||||||||||||||||||||
Sbjct: 98 atagcaagaaatgtgatgaa 79
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>gb|AC131758.3| Mus musculus BAC clone RP24-211E5 from chromosome 19, complete sequence
          Length = 206288

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    atagcaagaaatgtgatgaa 54
             ||||||||||||||||||||
Sbjct: 56335 atagcaagaaatgtgatgaa 56354
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>gb|AC144725.16| Medicago truncatula clone mth2-7m17, complete sequence
          Length = 130213

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   gtttttggtttcaagttttg 195
             ||||||||||||||||||||
Sbjct: 16152 gtttttggtttcaagttttg 16171
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>emb|AL118509.9|HSJ770C23 Human DNA sequence from clone RP4-770C23 on chromosome 20 Contains part
             of the C20orf23 gene for a novel protein similar to KIF1
             type and other kinesin-like proteins, complete sequence
          Length = 81487

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   acctctctctcttctttttc 158
             ||||||||||||||||||||
Sbjct: 22701 acctctctctcttctttttc 22682
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>emb|BX640916.1|HSM807056 Homo sapiens mRNA; cDNA DKFZp667P1015 (from clone DKFZp667P1015)
          Length = 2040

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 140  cctctctctcttctttttcc 159
            ||||||||||||||||||||
Sbjct: 1131 cctctctctcttctttttcc 1112
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>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    aagaaatgtgatgaactaaa 59
             ||||||||||||||||||||
Sbjct: 54333 aagaaatgtgatgaactaaa 54352
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>emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 in linkage group 9,
             complete sequence
          Length = 137898

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   gttcacacctctctctcttc 152
             ||||||||||||||||||||
Sbjct: 51930 gttcacacctctctctcttc 51949
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>dbj|AK093175.1| Homo sapiens cDNA FLJ35856 fis, clone TESTI2007163, weakly similar to
            GLIOMA PATHOGENESIS-RELATED PROTEIN
          Length = 1723

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 140  cctctctctcttctttttcc 159
            ||||||||||||||||||||
Sbjct: 1022 cctctctctcttctttttcc 1003
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>gb|AY073404.1| Mus musculus olfactory receptor MOR202-15 gene, complete cds
          Length = 927

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 atagcaagaaatgtgatgaa 54
          ||||||||||||||||||||
Sbjct: 98 atagcaagaaatgtgatgaa 79
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>gb|AC073528.26|AC073528 Homo sapiens 12 BAC RP11-8P16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 167041

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    ttctggggaggaggagtgtg 308
              ||||||||||||||||||||
Sbjct: 122901 ttctggggaggaggagtgtg 122920
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 137      acacctctctctcttctttttcca 160
                ||||||||||||||| ||||||||
Sbjct: 12324006 acacctctctctcttttttttcca 12323983
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 140      cctctctctcttctttttcc 159
                ||||||||||||||||||||
Sbjct: 24594942 cctctctctcttctttttcc 24594961
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>gb|AC121761.4| Homo sapiens 12 BAC RP11-585P4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170917

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    cctctctctcttctttttcc 159
              ||||||||||||||||||||
Sbjct: 101262 cctctctctcttctttttcc 101243
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>gb|AC073907.25| Homo sapiens 12 BAC RP11-202G24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 135245

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    ttctggggaggaggagtgtg 308
              ||||||||||||||||||||
Sbjct: 112108 ttctggggaggaggagtgtg 112089
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>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0026F07
          Length = 137354

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    cctctctctcttctttttcc 159
              ||||||||||||||||||||
Sbjct: 103202 cctctctctcttctttttcc 103221
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>gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, complete sequence
          Length = 235239

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   agttgattaatttctaggta 223
             ||||||||||||||||||||
Sbjct: 19423 agttgattaatttctaggta 19442
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>gb|AC084416.36| Mus musculus strain C57BL/6J chromosome 5 clone rp23-430i3, complete
             sequence
          Length = 183540

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   agttgattaatttctaggta 223
             ||||||||||||||||||||
Sbjct: 43632 agttgattaatttctaggta 43613
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 137      acacctctctctcttctttttcca 160
                ||||||||||||||| ||||||||
Sbjct: 12331346 acacctctctctcttttttttcca 12331323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,607,433
Number of Sequences: 3902068
Number of extensions: 3607433
Number of successful extensions: 85486
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85237
Number of HSP's gapped (non-prelim): 239
length of query: 325
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 303
effective length of database: 17,147,199,772
effective search space: 5195601530916
effective search space used: 5195601530916
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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