ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25j12 |
|---|---|
| Clone Library Name | barley_pub |
>NPT2B_MOUSE (Q9DBP0) Sodium-dependent phosphate transport protein 2B| (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (NaPi-2b) (Solute carrier family 34 Length = 697 Score = 33.5 bits (75), Expect = 0.40 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +2 Query: 29 TCLKRRCIMCCRLCARGMSTIQSCLGMRLS 118 TC +RRC CCR+C R + C R S Sbjct: 612 TCFQRRCCCCCRVCCRVCCMVCGCKCCRCS 641
>NPT2B_RAT (Q9JJ09) Sodium-dependent phosphate transport protein 2B| (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (NaPi-2b) (Solute carrier family 34 me Length = 695 Score = 32.0 bits (71), Expect = 1.2 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +2 Query: 29 TCLKRRCIMCCRLCARGMSTIQSCLGMRLS 118 +C +RRC CCR+C R + C R S Sbjct: 612 SCFQRRCCCCCRVCCRVCCMVCGCKCCRCS 641
>XYLB_BUTFI (P45982) Xylosidase/arabinosidase [Includes: Beta-xylosidase (EC| 3.2.1.37) (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase); Alpha-N-arabinofuranosidase (EC 3.2.1.55) (Arabinosidase)] Length = 517 Score = 30.4 bits (67), Expect = 3.4 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -1 Query: 228 VPIYHCSSLALFERLVEVADESIKLPLRLDV 136 VPI+H LA FE++ + D +LPL D+ Sbjct: 38 VPIFHTKDLAHFEQIGNILDRESQLPLSGDI 68
>MRP2_MOUSE (Q8VI47) Canalicular multispecific organic anion transporter 1| (ATP-binding cassette sub-family C member 2) Length = 1543 Score = 30.0 bits (66), Expect = 4.4 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +1 Query: 295 IVDVESENPENTVVPEQVDEYIDIDDEMPTAT 390 +V + SE N V E+++EYI++D+E P T Sbjct: 1253 LVRMTSEVETNIVAVERINEYINVDNEAPWVT 1284
>DHOM_PSEAE (P29365) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)| Length = 434 Score = 30.0 bits (66), Expect = 4.4 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = +1 Query: 160 DRFVSNFNKALKKSQRAAMINGDIADVNNADGAEA-----VNGAVPILVDIVDVESENPE 324 DR ++N N + A M+NGD GA A + V LVD+V + +PE Sbjct: 269 DRLIANVNGVMN----AVMVNGDAVGSTLYYGAGAGMEPTASSVVADLVDVVRAMTSDPE 324 Query: 325 NTV 333 N V Sbjct: 325 NRV 327
>YFIT_BACSU (O31562) Putative metal-dependent hydrolase yfiT (EC 3.-.-.-)| Length = 178 Score = 29.6 bits (65), Expect = 5.8 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = +1 Query: 319 PENTVVPEQVDEYIDIDDEMPTATYQSVEIQKDAE 423 P ++ EQ D++I + +E+P Q+VE+ D++ Sbjct: 15 PRESISKEQKDKWIQVLEEVPAKLKQAVEVMTDSQ 49
>NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protein 2B| (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (NaPi-2b) (Solute carrier family 34 Length = 690 Score = 29.3 bits (64), Expect = 7.6 Identities = 9/23 (39%), Positives = 12/23 (52%) Frame = +2 Query: 32 CLKRRCIMCCRLCARGMSTIQSC 100 C + RC CCR+C R + C Sbjct: 613 CFQMRCCCCCRVCCRACCLLCGC 635
>WIS4_SCHPO (O14299) MAP kinase kinase kinase wis4 (EC 2.7.11.25) (MAP kinase| kinase kinase wak1) (MAP kinase kinase kinase wik1) Length = 1401 Score = 29.3 bits (64), Expect = 7.6 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 5/63 (7%) Frame = +1 Query: 244 NADGAEAVN----GAVPILVDIVDVESENPENTVVP-EQVDEYIDIDDEMPTATYQSVEI 408 NAD AE + G P+L +++D + ++ E T P EQV E ++ ++ S E+ Sbjct: 290 NADQAEVIRKSREGVEPVLREVIDFQIQDEETTKPPLEQVTEILEKVEQCKQFYISSREM 349 Query: 409 QKD 417 +++ Sbjct: 350 EEN 352
>NPT2B_PONPY (Q5REV9) Sodium-dependent phosphate transport protein 2B| (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (NaPi-2b) (Solute carrier family 34 Length = 689 Score = 29.3 bits (64), Expect = 7.6 Identities = 9/23 (39%), Positives = 12/23 (52%) Frame = +2 Query: 32 CLKRRCIMCCRLCARGMSTIQSC 100 C + RC CCR+C R + C Sbjct: 612 CFQMRCCCCCRVCCRACCLLCGC 634
>REX_OCEIH (Q8ESI2) Redox-sensing transcriptional repressor rex| Length = 209 Score = 28.9 bits (63), Expect = 9.9 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 12/79 (15%) Frame = -1 Query: 240 DISNVPIYHCSSLALFERLVEV------ADESIKLPLRLDVHFVNIQLNL------IPKQ 97 DI VP+YH L + EV ADE+ + +L H V+ LN +P Sbjct: 125 DIGGVPVYHIDELGERLKNTEVAILTIPADEADAIANQLVEHGVSGILNFTPARITVPSH 184 Query: 96 LWIVDIPLAHNLQHIMHLL 40 + + I LA LQ +++ L Sbjct: 185 IRVHHIDLAIELQSLVYFL 203
>MATK_BOWVO (Q6LA17) Maturase K (Intron maturase)| Length = 511 Score = 28.9 bits (63), Expect = 9.9 Identities = 10/30 (33%), Positives = 20/30 (66%) Frame = -1 Query: 135 HFVNIQLNLIPKQLWIVDIPLAHNLQHIMH 46 H +++++++ Q WI DIP H+L+ +H Sbjct: 159 HPIHMEISVQILQCWIQDIPFLHSLRFFLH 188 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.132 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,200,553 Number of Sequences: 219361 Number of extensions: 1059139 Number of successful extensions: 3540 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3452 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3539 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
