>HS23C_CHERU (P11890) Small heat shock protein, chloroplast precursor|
          Length = 204

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 25/123 (20%)
 Frame = +3

Query: 147 RPYNTLVKEAIRYDDD---DDYSGRHLV-----LPSFFSQDVLDPLGAHQTG-------- 278
           R +NT  +   R D D   DD S R  +      P+ F  DV DP  A ++         
Sbjct: 27  RSFNTNAQMG-RVDHDHELDDRSNRAPISRRGDFPASFFSDVFDPFRATRSVGQLMNLMD 85

Query: 279 -------LSCTAGASRLGR--WVTKEDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGEG 431
                  ++ + G+ R  R  W  +ED+ A+ LKV MPGL KE V+V  + N L+IK E 
Sbjct: 86  QLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEA 145

Query: 432 EKQ 440
           EK+
Sbjct: 146 EKE 148

>HS23M_ARATH (Q96331) Heat shock 22 kDa protein, mitochondrial precursor|
          Length = 210

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
 Frame = +3

Query: 39  MASAVACKGATPASFLKSGAPVAFCPLNTTAVTADHRPYNTLVKEAIRYDDDDDYSGRHL 218
           MASA+A K    +S       V        AV++  R +NT    A+R  DDD  +G  +
Sbjct: 1   MASALALKRLLSSSIAPRSRSVL-----RPAVSS--RLFNT---NAVRSYDDDGENGDGV 50

Query: 219 VL---------PSFFSQDVLDPLGAHQTG---------------LSCTAGASRLGR---W 317
            L           FFS DV DP    ++                LS T G    G    W
Sbjct: 51  DLYRRSVPRRRGDFFS-DVFDPFSPTRSVSQVLNLMDQFMENPLLSATRGMGASGARRGW 109

Query: 318 VTKEDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGEGEKQPWDGDD 458
             KE D A+YL++ MPGL++E V++  +++ LVI+GEG+ +   G++
Sbjct: 110 DIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEE 156

>HS22M_SOYBN (Q39818) Heat shock 22 kDa protein, mitochondrial precursor|
          Length = 211

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 22/49 (44%), Positives = 35/49 (71%)
 Frame = +3

Query: 315 WVTKEDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGEGEKQPWDGDDD 461
           W  +E + A++L+V MPGL KE V++  ++N L+IKGEG K   +GD++
Sbjct: 114 WDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAK---EGDEE 159

>HS21C_ARATH (P31170) Small heat shock protein, chloroplast precursor|
          Length = 227

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 21/48 (43%), Positives = 33/48 (68%)
 Frame = +3

Query: 315 WVTKEDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGEGEKQPWDGDD 458
           W  KE++  + ++  MPGL+KE V++  + N+LVIKGE +K+  D DD
Sbjct: 129 WDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKE--DSDD 174

>HS22C_PETHY (P30222) Small heat shock protein, chloroplast precursor|
          Length = 241

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 20/48 (41%), Positives = 32/48 (66%)
 Frame = +3

Query: 315 WVTKEDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGEGEKQPWDGDD 458
           W  K+D+  + ++  MPGL+KE V+V  + ++LVIKGE +K+    DD
Sbjct: 142 WDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDD 189

>HS22M_PEA (P46254) Heat shock 22 kDa protein, mitochondrial precursor|
          Length = 202

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
 Frame = +3

Query: 39  MASAVACK-----GATPASFLKSGAPVAFCPLNTTAVTADHRPYNTLVKEAIRYDDDDDY 203
           MAS++A K     G   +SFL+  A  A    NT A+    R Y+       ++ DD + 
Sbjct: 1   MASSLALKRFLSSGLLSSSFLRPVASSASRSFNTNAM----RQYD-------QHSDDRNV 49

Query: 204 SGRHLVLP-----SFFSQDVLDPLGAHQ------------TGLSCTAGASRLGRWVTKED 332
                  P          DV DP    +            T     + ASR G W  +E 
Sbjct: 50  DVYRHSFPRTRRDDLLLSDVFDPFSPPRSLSQVLNMVDLLTDNPVLSAASRRG-WDARET 108

Query: 333 DGAVYLKVPMPGLTKEHVQVRADKNILVIKGE 428
           + A++L++ MPGL KE V++  ++N L IKGE
Sbjct: 109 EDALFLRLDMPGLGKEDVKISVEQNTLTIKGE 140

>HS21C_WHEAT (Q00445) Small heat shock protein, chloroplast precursor (Heat|
           shock protein 26.6)
          Length = 238

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 23/63 (36%), Positives = 36/63 (57%)
 Frame = +3

Query: 273 TGLSCTAGASRLGRWVTKEDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGEGEKQPWDG 452
           T  S  A A R   W   ED+  V ++  MPGL++E V+V  + + LVI+GE +K+  +G
Sbjct: 119 TRRSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEG 178

Query: 453 DDD 461
             +
Sbjct: 179 QGE 181

>HSP13_ARATH (P19037) 18.2 kDa class I heat shock protein (HSP 18.2)|
          Length = 161

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
 Frame = +3

Query: 201 YSGRHLVLPSFFSQDVLDPLGAHQTGLSCTAGASRL--------GRWVTKEDDGAVYLKV 356
           + GR   +   FSQD+ DP     T  S  A AS           R   KE   A   K 
Sbjct: 8   FGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKA 67

Query: 357 PMPGLTKEHVQVRA-DKNILVIKGEGEKQPWDGDD 458
            +PGL KE V+V   DKN+L I GE  K+  + +D
Sbjct: 68  DLPGLKKEEVKVEVEDKNVLQISGERSKENEEKND 102

>HS21C_LYCES (Q95661) Small heat shock protein, chloroplast precursor|
          Length = 235

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 20/48 (41%), Positives = 32/48 (66%)
 Frame = +3

Query: 315 WVTKEDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGEGEKQPWDGDD 458
           W   +D+  + ++  MPGL+KE V+V  + ++LVIKGE +K+  DG D
Sbjct: 135 WDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEE-DGRD 181

>HS22C_SOYBN (P09887) Chloroplast small heat shock protein (Fragment)|
          Length = 181

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 18/49 (36%), Positives = 30/49 (61%)
 Frame = +3

Query: 315 WVTKEDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGEGEKQPWDGDDD 461
           W  K+++  + ++  MPGL KE V+V  + ++LVIKG  + +   G DD
Sbjct: 80  WDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDD 128

>HS21C_PEA (P09886) Small heat shock protein, chloroplast precursor|
          Length = 232

 Score = 36.2 bits (82), Expect = 0.042
 Identities = 15/49 (30%), Positives = 32/49 (65%)
 Frame = +3

Query: 315 WVTKEDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGEGEKQPWDGDDD 461
           W  K+++  + ++  MPG++KE V+V  + ++LVIK +  ++  +G +D
Sbjct: 133 WEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREE--NGGED 179

>HSP30_EMENI (P40920) 30 kDa heat shock protein|
          Length = 181

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +3

Query: 246 VLDPLGAHQTGLSCTAGASRLGRWVTKEDDGAVYLKVPMPGLTKEHVQVR-ADKNILVIK 422
           +LD    H++     +  S   R+  +E + A +L   +PG+ + ++ +   D   LVIK
Sbjct: 19  LLDDYDNHRSARGHASVQSFAPRFDVRESNEAYHLDGELPGIPQSNIDIEFTDPQTLVIK 78

Query: 423 GEGEKQPWDGDDD 461
           G  E++     DD
Sbjct: 79  GRSEREYHSSSDD 91

>HSP15_LEPIN (Q93TV7) Probable 15 kDa heat shock protein|
          Length = 130

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +3

Query: 330 DDGAVYLKVPMPGLTKEHVQVRADKNILVIKGEGEKQPWDGD 455
           D+  +YL   +PG+ ++ VQV+ +K+ L+I G+   +   G+
Sbjct: 35  DEENIYLLADLPGVEEKDVQVQLEKDQLIISGKTSNKDIQGE 76

>HSP15_LEPIC (Q72QA1) Probable 15 kDa heat shock protein|
          Length = 130

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +3

Query: 330 DDGAVYLKVPMPGLTKEHVQVRADKNILVIKGEGEKQPWDGD 455
           D+  +YL   +PG+ ++ VQV+ +K+ L+I G+   +   G+
Sbjct: 35  DEENIYLLADLPGVEEKDVQVQLEKDQLIISGKTSNKDIQGE 76

>YMP2_CAEEL (Q10946) Hypothetical protein B0361.2|
          Length = 460

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 186 DDDDDYSGRHLVLPSFFSQDVLDPLGAH-QTGLSCTAGASR 305
           DDDDDYSGR ++ P   ++     LG+   TG +   G+ +
Sbjct: 7   DDDDDYSGRKVIKPKPIAEKYAKKLGSEFSTGKTFVTGSDK 47

>YE86_MYCAV (O07402) Hypothetical protein MAV321|
          Length = 306

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 262 PSGSRTSCEKKLGRTRWRPLXXXXXX*RMASLTRVLYGRW 143
           P G+++S E ++     RPL       RMA++T +L+  W
Sbjct: 265 PLGTQSSSEARIAGDPVRPLTAVVRSARMAAVTAILHSAW 304

>HISZ_RALSO (Q8Y020) ATP phosphoribosyltransferase regulatory subunit|
          Length = 386

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -1

Query: 151 GRWSAVTAVVLRGQKATG-APDLRKLAGVAPLQATAEAM 38
           GR+  V     R + ATG + DLR++AG++P+QA A A+
Sbjct: 288 GRYDKVGEAFGRARPATGFSLDLREVAGISPVQARAAAI 326

>H11_CAEEL (P10771) Histone H1.1|
          Length = 207

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 22/66 (33%), Positives = 30/66 (45%)
 Frame = +3

Query: 48  AVACKGATPASFLKSGAPVAFCPLNTTAVTADHRPYNTLVKEAIRYDDDDDYSGRHLVLP 227
           A A K A P    K+ APVA            H PY  ++KEAI+   D   + +  +L 
Sbjct: 17  AKAAKAAKPTKVAKAKAPVA------------HPPYINMIKEAIKQLKDRKGASKQAIL- 63

Query: 228 SFFSQD 245
            F SQ+
Sbjct: 64  KFISQN 69

>ASP1_STRTR (P80485) Acid shock protein (T786P28D)|
          Length = 142

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 327 EDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGE 428
           E D    ++  +PG+ KE++QV  +  +L I G+
Sbjct: 43  ETDNEYLVEAELPGIPKENIQVTYENGVLTISGQ 76

>CORO6_MOUSE (Q920M5) Coronin-6 (Clipin E)|
          Length = 471

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 368 PRHRHLEVHRAVVLLGHPASEPRRPSSAGQAGL 270
           P+HR L V +  +L   P + PRR  SA +A L
Sbjct: 398 PKHRELRVTKRNILDVRPPASPRRSQSASEAPL 430

>HSP16_SCHPO (O14368) Heat shock protein 16 (16 kDa heat shock protein)|
          Length = 143

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 327 EDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGE 428
           E    V + V +PG+ KE VQV  D   L I GE
Sbjct: 43  EGKDTVSVDVELPGVKKEDVQVHYDSGKLTISGE 76

>ASP2_STRTR (O30851) Heat shock protein HSP.16.4|
          Length = 142

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 327 EDDGAVYLKVPMPGLTKEHVQVRADKNILVIKGE 428
           E D    ++  +PG+ KE +QV  +  +L I G+
Sbjct: 43  ETDNEYVVEAELPGIPKEDIQVNYENGVLTISGQ 76

>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 222  LPSFFSQ-DVLDPLGAHQTGLSCTAGASRLGRWVTKEDDGAVYLKVPMPGLTKEHVQVRA 398
            LP   ++  +L+  G H   L+ +A   R+   + +    A  +KVPM    +  VQ+R 
Sbjct: 2690 LPQLLAKLSILENRGVHNASLALSASIGRVRELIAQARGAASKVKVPMKFNGRSGVQLRT 2749

Query: 399  DKNI 410
             +++
Sbjct: 2750 PRDL 2753


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,612,080
Number of Sequences: 219361
Number of extensions: 653652
Number of successful extensions: 2462
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2462
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)