ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25j06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197006.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0026O12.9), mRNA Length = 1855 Score = 607 bits (306), Expect = e-170 Identities = 569/654 (87%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 2 tggaagcttgcattactcc-tatcc-gaacaaatgcacagggatgggggaagtggattgg 59 |||||||||||||||| || ||||| ||||||||||||| |||||||||| |||| ||| Sbjct: 1166 tggaagcttgcattacgccatatccagaacaaatgcacaaagatgggggaactggactgg 1225 Query: 60 ctccttggcctgcccgattaacaaccccacctcctcgccttgcagatttgtatgttacag 119 ||||||||||||| ||||||||||| |||||||| || ||||| ||||||||||| || | Sbjct: 1226 ctccttggcctgctcgattaacaactccacctccccgtcttgctgatttgtatgtcactg 1285 Query: 120 ctgacacatttgaaaaagatacggaaatgtggcagcaaagagtagataattactggaatt 179 |||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| | Sbjct: 1286 ctgacacatttgaaaaagatacagaaatgtggcaacaaagagtagataactactggagat 1345 Query: 180 tattgcgcccaaagataaaaccagagagtattagaaacatcatggacatgaaagcaaact 239 | || ||||||||||||||||| | |||||||||||||||||| ||||||||||||| Sbjct: 1346 tgttaaaaccaaagataaaaccagacactattagaaacatcatggatatgaaagcaaact 1405 Query: 240 ttggatcatttgctgctgctctcaaggaaaaagatgtatgggtgatgaacgccgtgtccc 299 |||| |||||||| ||||||||||||||||| ||||||||||| ||||| | || | | Sbjct: 1406 ttgggtcatttgcagctgctctcaaggaaaaggatgtatgggtcatgaatgttgttccac 1465 Query: 300 atgatggaccaaacactcttaagataatctatgacagagggctcataggctctacacatg 359 |||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 1466 atgatggaccaagcactctcaagataatctatgacagagggcttataggttctactcatg 1525 Query: 360 actggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtggacag 419 |||||||||| |||||||| || ||||||||||| ||||||||||| || || ||||||| Sbjct: 1526 actggtgtgaagcattctcaacctatcctcgaacatatgatcttctccatgcatggacag 1585 Query: 420 tcttcaccgaccttgagaaaagaggttgcagtgctgaagatctgctccttgaaatggatc 479 ||||| | |||||||| || ||||||||||| || |||||||| || ||||||||||| | Sbjct: 1586 tcttctctgaccttgacaagagaggttgcagcgcagaagatctcctgcttgaaatggacc 1645 Query: 480 gtatactcaggccaactggttttatcatcgtgagagacaaggcccctatcattgtattca 539 | || | ||||| | ||| |||||||||||||||||||||| | || |||| | ||||| Sbjct: 1646 gcatcgttaggcctagtggatttatcatcgtgagagacaaggacactgtcatcgaattca 1705 Query: 540 tcaagaagtacctcaatgcacttcactgggaggcagtaactgttgtggatggcgagtcca 599 ||||||| |||||||| |||||||||||||| |||||||| ||| |||| |||||| | Sbjct: 1706 tcaagaaatacctcaacgcacttcactgggaagcagtaacaactgtagatgccgagtcaa 1765 Query: 600 gtccggaatctgaggagaacgaaatgatactcataatcagaaagaaattgtggc 653 |||| |||||||||||||| |||||||| |||||||| | ||||||||||||| Sbjct: 1766 gtccagaatctgaggagaatgaaatgatcttcataatccggaagaaattgtggc 1819
>dbj|AK067258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095H15, full insert sequence Length = 2438 Score = 585 bits (295), Expect = e-164 Identities = 567/654 (86%), Gaps = 4/654 (0%) Strand = Plus / Plus Query: 2 tggaagcttgcattactcc-tatcc-gaacaaatgcacagggatgggggaagtggattgg 59 |||||||||||||||| || ||||| ||||||||||||| |||||||||| |||| ||| Sbjct: 1464 tggaagcttgcattacgccatatccagaacaaatgcacaaagatgggggaactggactgg 1523 Query: 60 ctccttggcctgcccgattaacaaccccacctcctcgccttgcagatttgtatgttacag 119 ||||||||||||| ||||||||||| || ||||| || ||||| ||||||||||| || | Sbjct: 1524 ctccttggcctgctcgattaacaactccgcctccccgtcttgctgatttgtatgtcactg 1583 Query: 120 ctgacacatttgaaaaagatacggaaatgtggcagcaaagagtagataattactggaatt 179 |||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| | Sbjct: 1584 ctgacacatttgaaaaagatacagaaatgtggcaacaaagagtagataactactggagat 1643 Query: 180 tattgcgcccaaagataaaaccagagagtattagaaacatcatggacatgaaagcaaact 239 | || ||||||||||||||||| | |||||||||||||||||| ||||||||||||| Sbjct: 1644 tgttaaaaccaaagataaaaccagacactattagaaacatcatggatatgaaagcaaact 1703 Query: 240 ttggatcatttgctgctgctctcaaggaaaaagatgtatgggtgatgaacgccgtgtccc 299 |||| |||||||| ||||||||||||||||| ||||||||||| ||||| | || | | Sbjct: 1704 ttgggtcatttgcagctgctctcaaggaaaaggatgtatgggtcatgaatgttgttccac 1763 Query: 300 atgatggaccaaacactcttaagataatctatgacagagggctcataggctctacacatg 359 |||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 1764 atgatggaccaagcactctcaagataatctatgacagagggcttataggttctactcatg 1823 Query: 360 actggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtggacag 419 |||||||||| |||||||| || ||||||||||| |||||||||| || || ||||||| Sbjct: 1824 actggtgtgaagcattctcaacctatcctcgaac--atgatcttctccatgcatggacag 1881 Query: 420 tcttcaccgaccttgagaaaagaggttgcagtgctgaagatctgctccttgaaatggatc 479 ||||| | |||||||| || ||||||||||| || |||||||| || ||||||||||| | Sbjct: 1882 tcttctctgaccttgacaagagaggttgcagcgcagaagatctcctgcttgaaatggacc 1941 Query: 480 gtatactcaggccaactggttttatcatcgtgagagacaaggcccctatcattgtattca 539 | || | ||||| | ||| |||||||||||||||||||||| | || |||| | ||||| Sbjct: 1942 gcatcgttaggcctagtggatttatcatcgtgagagacaaggacactgtcatcgaattca 2001 Query: 540 tcaagaagtacctcaatgcacttcactgggaggcagtaactgttgtggatggcgagtcca 599 ||||||| |||||||| |||||||||||||| |||||||| ||| |||| |||||| | Sbjct: 2002 tcaagaaatacctcaacgcacttcactgggaagcagtaacaactgtagatgccgagtcaa 2061 Query: 600 gtccggaatctgaggagaacgaaatgatactcataatcagaaagaaattgtggc 653 |||| |||||||||||||| |||||||| |||||||| | ||||||||||||| Sbjct: 2062 gtccagaatctgaggagaatgaaatgatcttcataatccggaagaaattgtggc 2115
>gb|BT018391.1| Zea mays clone EL01N0318A05.d mRNA sequence Length = 1513 Score = 480 bits (242), Expect = e-132 Identities = 556/658 (84%), Gaps = 2/658 (0%) Strand = Plus / Plus Query: 2 tggaagcttgcattactcc-tatcc-gaacaaatgcacagggatgggggaagtggattgg 59 ||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||| | | Sbjct: 521 tggaagcttgcattactccgtatcctgaacaaatgcacagagatgggggaactgggctag 580 Query: 60 ctccttggcctgcccgattaacaaccccacctcctcgccttgcagatttgtatgttacag 119 |||| |||||||||||||| ||| |||| ||||| || ||||| |||||||| |||| | Sbjct: 581 ctccctggcctgcccgattgacagccccgcctccccgtcttgctgatttgtacattactg 640 Query: 120 ctgacacatttgaaaaagatacggaaatgtggcagcaaagagtagataattactggaatt 179 |||||||||||||||| || |||||||||||||||||||||||||| || || |||| || Sbjct: 641 ctgacacatttgaaaaggacacggaaatgtggcagcaaagagtagaaaactattggagtt 700 Query: 180 tattgcgcccaaagataaaaccagagagtattagaaacatcatggacatgaaagcaaact 239 | || |||||||| |||||||||| | |||||||||||||||||||||||| ||||||| Sbjct: 701 tgctgggcccaaaggtaaaaccagacactattagaaacatcatggacatgaaggcaaact 760 Query: 240 ttggatcatttgctgctgctctcaaggaaaaagatgtatgggtgatgaacgccgtgtccc 299 |||| |||||||||||||| |||||||| ||||| |||||||||||| | | ||| | | Sbjct: 761 ttgggtcatttgctgctgcactcaaggagaaagacgtatgggtgatgcatgttgtgccac 820 Query: 300 atgatggaccaaacactcttaagataatctatgacagagggctcataggctctacacatg 359 |||||||||||| ||| || |||||||||||||| |||||||| |||||| | || | Sbjct: 821 atgatggaccaagcaccctcaagataatctatgatagagggctgataggcagcaatcacg 880 Query: 360 actggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtggacag 419 |||||||||| || ||||| || ||||||||||| || |||||||| ||||| ||| ||| Sbjct: 881 actggtgtgaagccttctcaacctatcctcgaacatacgatcttctccacgcatgggcag 940 Query: 420 tcttcaccgaccttgagaaaagaggttgcagtgctgaagatctgctccttgaaatggatc 479 |||| | |||||||| |||||||| |||||||| ||||| ||||||| | |||||||| Sbjct: 941 tcttttctgaccttgataaaagaggctgcagtgccgaagacctgctcccttgaatggatc 1000 Query: 480 gtatactcaggccaactggttttatcatcgtgagagacaaggcccctatcattgtattca 539 |||| |||||||| ||||| ||| ||||||||| ||||||| | | |||||| |||| Sbjct: 1001 gtatcctcaggccgactgggtttgccatcgtgagggacaagggcaccgtcattgagttca 1060 Query: 540 tcaagaagtacctcaatgcacttcactgggaggcagtaactgttgtggatggcgagtcca 599 |||||||||||||| | |||||||||||||||||| | ||||| ||||| | ||| ||| Sbjct: 1061 tcaagaagtacctccacgcacttcactgggaggcattgactgtcgtggacgctgagccca 1120 Query: 600 gtccggaatctgaggagaacgaaatgatactcataatcagaaagaaattgtggctacc 657 | || ||||| ||||||| ||||||||| | |||||| | ||||| |||||||||| Sbjct: 1121 gcccagaatcagaggagagcgaaatgatcttgataatccggaagaagctgtggctacc 1178
>gb|AY104260.1| Zea mays PCO084303 mRNA sequence Length = 1044 Score = 305 bits (154), Expect = 1e-79 Identities = 259/290 (89%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 2 tggaagcttgcattactcc-tatcc-gaacaaatgcacagggatgggggaagtggattgg 59 ||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| | | Sbjct: 747 tggaagcttgcattactccgtatcctgaacaaatgcacagagatgggggaagtgggctag 806 Query: 60 ctcct-tggcctgcccgattaacaaccccacctcctcgccttgcagatttgtatgttaca 118 |||| |||||||| |||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 807 ctcccctggcctgctcgattaacaaccccgcctccccgtcttgctgatttgtatgttact 866 Query: 119 gctgacacatttgaaaaagatacggaaatgtggcagcaaagagtagataattactggaat 178 ||||||||||||||||| || |||||||||||||||||| ||||||| || || |||| | Sbjct: 867 gctgacacatttgaaaaggacacggaaatgtggcagcaacgagtagaaaaatattggagt 926 Query: 179 ttattgcgcccaaagataaaaccagagagtattagaaacatcatggacatgaaagcaaac 238 || ||| |||||||| |||||||||| | |||||||||||||||||||||||||||||| Sbjct: 927 ttgttgggcccaaaggtaaaaccagacactattagaaacatcatggacatgaaagcaaat 986 Query: 239 tttggatcatttgctgctgctctcaaggaaaaagatgtatgggtgatgaa 288 ||||| |||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 987 tttgggtcatttgctgctgcactcaaagaaaaagacgtatgggtgatgaa 1036
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 236 bits (119), Expect = 7e-59 Identities = 248/291 (85%) Strand = Plus / Minus Query: 363 ggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtggacagtct 422 ||||||| |||||||| || ||||||||||| ||||||||||| || || |||||||||| Sbjct: 88167 ggtgtgaagcattctcaacctatcctcgaacatatgatcttctccatgcatggacagtct 88108 Query: 423 tcaccgaccttgagaaaagaggttgcagtgctgaagatctgctccttgaaatggatcgta 482 || | |||||||| || ||||||||||| || |||||||| || ||||||||||| || | Sbjct: 88107 tctctgaccttgacaagagaggttgcagcgcagaagatctcctgcttgaaatggaccgca 88048 Query: 483 tactcaggccaactggttttatcatcgtgagagacaaggcccctatcattgtattcatca 542 | | ||||| | ||| |||||||||||||||||||||| | || |||| | |||||||| Sbjct: 88047 tcgttaggcctagtggatttatcatcgtgagagacaaggacactgtcatcgaattcatca 87988 Query: 543 agaagtacctcaatgcacttcactgggaggcagtaactgttgtggatggcgagtccagtc 602 |||| |||||||| |||||||||||||| |||||||| ||| |||| |||||| |||| Sbjct: 87987 agaaatacctcaacgcacttcactgggaagcagtaacaactgtagatgccgagtcaagtc 87928 Query: 603 cggaatctgaggagaacgaaatgatactcataatcagaaagaaattgtggc 653 | |||||||||||||| |||||||| |||||||| | ||||||||||||| Sbjct: 87927 cagaatctgaggagaatgaaatgatcttcataatccggaagaaattgtggc 87877 Score = 230 bits (116), Expect = 5e-57 Identities = 197/224 (87%) Strand = Plus / Minus Query: 142 ggaaatgtggcagcaaagagtagataattactggaatttattgcgcccaaagataaaacc 201 |||||||||||| |||||||||||||| ||||||| || || |||||||||||||| Sbjct: 89174 ggaaatgtggcaacaaagagtagataactactggagattgttaaaaccaaagataaaacc 89115 Query: 202 agagagtattagaaacatcatggacatgaaagcaaactttggatcatttgctgctgctct 261 ||| | |||||||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 89114 agacactattagaaacatcatggatatgaaagcaaactttgggtcatttgcagctgctct 89055 Query: 262 caaggaaaaagatgtatgggtgatgaacgccgtgtcccatgatggaccaaacactcttaa 321 ||||||||| ||||||||||| ||||| | || | ||||||||||||| |||||| || Sbjct: 89054 caaggaaaaggatgtatgggtcatgaatgttgttccacatgatggaccaagcactctcaa 88995 Query: 322 gataatctatgacagagggctcataggctctacacatgactggt 365 ||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 88994 gataatctatgacagagggcttataggttctactcatgactggt 88951 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Minus Query: 30 aaatgcacagggatgggggaagtggattggctccttggcctgcccgattaacaaccccac 89 ||||||||| |||||||||| |||| |||||||||||||||| ||||||||||| |||| Sbjct: 89416 aaatgcacaaagatgggggaactggactggctccttggcctgctcgattaacaactccac 89357 Query: 90 ctcctcgccttgcagatttgtatgttacagctgacacatttgaaaaagatac 141 |||| || ||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 89356 ctccccgtcttgctgatttgtatgtcactgctgacacatttgaaaaagatac 89305
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 236 bits (119), Expect = 7e-59 Identities = 248/291 (85%) Strand = Plus / Plus Query: 363 ggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtggacagtct 422 ||||||| |||||||| || ||||||||||| ||||||||||| || || |||||||||| Sbjct: 17284112 ggtgtgaagcattctcaacctatcctcgaacatatgatcttctccatgcatggacagtct 17284171 Query: 423 tcaccgaccttgagaaaagaggttgcagtgctgaagatctgctccttgaaatggatcgta 482 || | |||||||| || ||||||||||| || |||||||| || ||||||||||| || | Sbjct: 17284172 tctctgaccttgacaagagaggttgcagcgcagaagatctcctgcttgaaatggaccgca 17284231 Query: 483 tactcaggccaactggttttatcatcgtgagagacaaggcccctatcattgtattcatca 542 | | ||||| | ||| |||||||||||||||||||||| | || |||| | |||||||| Sbjct: 17284232 tcgttaggcctagtggatttatcatcgtgagagacaaggacactgtcatcgaattcatca 17284291 Query: 543 agaagtacctcaatgcacttcactgggaggcagtaactgttgtggatggcgagtccagtc 602 |||| |||||||| |||||||||||||| |||||||| ||| |||| |||||| |||| Sbjct: 17284292 agaaatacctcaacgcacttcactgggaagcagtaacaactgtagatgccgagtcaagtc 17284351 Query: 603 cggaatctgaggagaacgaaatgatactcataatcagaaagaaattgtggc 653 | |||||||||||||| |||||||| |||||||| | ||||||||||||| Sbjct: 17284352 cagaatctgaggagaatgaaatgatcttcataatccggaagaaattgtggc 17284402 Score = 230 bits (116), Expect = 5e-57 Identities = 197/224 (87%) Strand = Plus / Plus Query: 142 ggaaatgtggcagcaaagagtagataattactggaatttattgcgcccaaagataaaacc 201 |||||||||||| |||||||||||||| ||||||| || || |||||||||||||| Sbjct: 17283105 ggaaatgtggcaacaaagagtagataactactggagattgttaaaaccaaagataaaacc 17283164 Query: 202 agagagtattagaaacatcatggacatgaaagcaaactttggatcatttgctgctgctct 261 ||| | |||||||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 17283165 agacactattagaaacatcatggatatgaaagcaaactttgggtcatttgcagctgctct 17283224 Query: 262 caaggaaaaagatgtatgggtgatgaacgccgtgtcccatgatggaccaaacactcttaa 321 ||||||||| ||||||||||| ||||| | || | ||||||||||||| |||||| || Sbjct: 17283225 caaggaaaaggatgtatgggtcatgaatgttgttccacatgatggaccaagcactctcaa 17283284 Query: 322 gataatctatgacagagggctcataggctctacacatgactggt 365 ||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 17283285 gataatctatgacagagggcttataggttctactcatgactggt 17283328 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 30 aaatgcacagggatgggggaagtggattggctccttggcctgcccgattaacaaccccac 89 ||||||||| |||||||||| |||| |||||||||||||||| ||||||||||| |||| Sbjct: 17282863 aaatgcacaaagatgggggaactggactggctccttggcctgctcgattaacaactccac 17282922 Query: 90 ctcctcgccttgcagatttgtatgttacagctgacacatttgaaaaagatac 141 |||| || ||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 17282923 ctccccgtcttgctgatttgtatgtcactgctgacacatttgaaaaagatac 17282974
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 236 bits (119), Expect = 7e-59 Identities = 248/291 (85%) Strand = Plus / Plus Query: 363 ggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtggacagtct 422 ||||||| |||||||| || ||||||||||| ||||||||||| || || |||||||||| Sbjct: 17293152 ggtgtgaagcattctcaacctatcctcgaacatatgatcttctccatgcatggacagtct 17293211 Query: 423 tcaccgaccttgagaaaagaggttgcagtgctgaagatctgctccttgaaatggatcgta 482 || | |||||||| || ||||||||||| || |||||||| || ||||||||||| || | Sbjct: 17293212 tctctgaccttgacaagagaggttgcagcgcagaagatctcctgcttgaaatggaccgca 17293271 Query: 483 tactcaggccaactggttttatcatcgtgagagacaaggcccctatcattgtattcatca 542 | | ||||| | ||| |||||||||||||||||||||| | || |||| | |||||||| Sbjct: 17293272 tcgttaggcctagtggatttatcatcgtgagagacaaggacactgtcatcgaattcatca 17293331 Query: 543 agaagtacctcaatgcacttcactgggaggcagtaactgttgtggatggcgagtccagtc 602 |||| |||||||| |||||||||||||| |||||||| ||| |||| |||||| |||| Sbjct: 17293332 agaaatacctcaacgcacttcactgggaagcagtaacaactgtagatgccgagtcaagtc 17293391 Query: 603 cggaatctgaggagaacgaaatgatactcataatcagaaagaaattgtggc 653 | |||||||||||||| |||||||| |||||||| | ||||||||||||| Sbjct: 17293392 cagaatctgaggagaatgaaatgatcttcataatccggaagaaattgtggc 17293442 Score = 230 bits (116), Expect = 5e-57 Identities = 197/224 (87%) Strand = Plus / Plus Query: 142 ggaaatgtggcagcaaagagtagataattactggaatttattgcgcccaaagataaaacc 201 |||||||||||| |||||||||||||| ||||||| || || |||||||||||||| Sbjct: 17292145 ggaaatgtggcaacaaagagtagataactactggagattgttaaaaccaaagataaaacc 17292204 Query: 202 agagagtattagaaacatcatggacatgaaagcaaactttggatcatttgctgctgctct 261 ||| | |||||||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 17292205 agacactattagaaacatcatggatatgaaagcaaactttgggtcatttgcagctgctct 17292264 Query: 262 caaggaaaaagatgtatgggtgatgaacgccgtgtcccatgatggaccaaacactcttaa 321 ||||||||| ||||||||||| ||||| | || | ||||||||||||| |||||| || Sbjct: 17292265 caaggaaaaggatgtatgggtcatgaatgttgttccacatgatggaccaagcactctcaa 17292324 Query: 322 gataatctatgacagagggctcataggctctacacatgactggt 365 ||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 17292325 gataatctatgacagagggcttataggttctactcatgactggt 17292368 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 30 aaatgcacagggatgggggaagtggattggctccttggcctgcccgattaacaaccccac 89 ||||||||| |||||||||| |||| |||||||||||||||| ||||||||||| |||| Sbjct: 17291903 aaatgcacaaagatgggggaactggactggctccttggcctgctcgattaacaactccac 17291962 Query: 90 ctcctcgccttgcagatttgtatgttacagctgacacatttgaaaaagatac 141 |||| || ||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 17291963 ctccccgtcttgctgatttgtatgtcactgctgacacatttgaaaaagatac 17292014
>gb|AY111823.1| Zea mays CL62719_1 mRNA sequence Length = 587 Score = 198 bits (100), Expect = 2e-47 Identities = 238/284 (83%) Strand = Plus / Plus Query: 374 ttctctacttatcctcgaacgtatgatcttctgcacgcgtggacagtcttcaccgacctt 433 ||||| || ||||||||||| || |||||||| ||||| ||| ||||||| | |||||| Sbjct: 3 ttctcaacctatcctcgaacatacgatcttctccacgcatgggcagtcttttctgacctt 62 Query: 434 gagaaaagaggttgcagtgctgaagatctgctccttgaaatggatcgtatactcaggcca 493 || |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 63 gataaaagaggctgcagtgccgaagacctgctccttgaaatggatcgtatcctcaggccg 122 Query: 494 actggttttatcatcgtgagagacaaggcccctatcattgtattcatcaagaagtacctc 553 ||||| ||| ||||||||| ||||||| | | |||||| |||||||||||||||||| Sbjct: 123 actgggtttgccatcgtgagggacaagggcaccgtcattgagttcatcaagaagtacctc 182 Query: 554 aatgcacttcactgggaggcagtaactgttgtggatggcgagtccagtccggaatctgag 613 | |||||||||||||||||| | ||||| ||||| | ||| |||| || ||||| ||| Sbjct: 183 cacgcacttcactgggaggcattgactgtcgtggacgctgagcccagcccagaatcagag 242 Query: 614 gagaacgaaatgatactcataatcagaaagaaattgtggctacc 657 |||| ||||||||| | |||||| | ||||| |||||||||| Sbjct: 243 gagagcgaaatgatcttgataatccggaagaagctgtggctacc 286
>ref|NM_113232.3| Arabidopsis thaliana unknown protein AT3G23300 mRNA, complete cds Length = 2212 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||||| | | || || |||||||||||||| || ||||||||| Sbjct: 1501 aacataatggacatgaaagcaagcatgggttcctttgctgctgctctgaaagaaaaagat 1560 Query: 275 gtatgggtgatgaa 288 || ||||| ||||| Sbjct: 1561 gtttgggttatgaa 1574 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 46 gggaagtggattggctccttggcctgcccgattaac 81 |||||||||||||||||| ||||| || |||||||| Sbjct: 1332 gggaagtggattggctccatggccagctcgattaac 1367 Score = 40.1 bits (20), Expect = 9.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 435 agaaaagaggttgcagtgctgaagatctgctccttgaaatggatcgtatact 486 |||| ||||||||||| || |||||| |||| | || |||||||||||||| Sbjct: 1721 agaagagaggttgcagcgcagaagatttgctgttggagatggatcgtatact 1772
>ref|NM_117513.2| Arabidopsis thaliana unknown protein AT4G14360 transcript variant AT4G14360.1 mRNA, complete cds Length = 2408 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||||| | | || || |||||||||||||| || ||||||||| Sbjct: 1732 aacataatggacatgaaagcaagcatgggctcttttgctgctgctctgaaagaaaaagat 1791 Query: 275 gtatgggtgatgaa 288 || ||||| ||||| Sbjct: 1792 gtctgggtaatgaa 1805
>ref|NM_001036562.1| Arabidopsis thaliana unknown protein AT4G14360 transcript variant AT4G14360.2 mRNA, complete cds Length = 2666 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||||| | | || || |||||||||||||| || ||||||||| Sbjct: 1619 aacataatggacatgaaagcaagcatgggctcttttgctgctgctctgaaagaaaaagat 1678 Query: 275 gtatgggtgatgaa 288 || ||||| ||||| Sbjct: 1679 gtctgggtaatgaa 1692
>gb|BT000890.1| Arabidopsis thaliana clone C105366 unknown protein (At3g23300) mRNA, complete cds Length = 1162 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||||| | | || || |||||||||||||| || ||||||||| Sbjct: 664 aacataatggacatgaaagcaagcatgggttcctttgctgctgctctgaaagaaaaagat 723 Query: 275 gtatgggtgatgaa 288 || ||||| ||||| Sbjct: 724 gtttgggttatgaa 737 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 46 gggaagtggattggctccttggcctgcccgattaac 81 |||||||||||||||||| ||||| || |||||||| Sbjct: 495 gggaagtggattggctccatggccagctcgattaac 530 Score = 40.1 bits (20), Expect = 9.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 435 agaaaagaggttgcagtgctgaagatctgctccttgaaatggatcgtatact 486 |||| ||||||||||| || |||||| |||| | || |||||||||||||| Sbjct: 884 agaagagaggttgcagcgcagaagatttgctgttggagatggatcgtatact 935
>gb|AY035138.1| Arabidopsis thaliana unknown protein (At3g23300) mRNA, partial cds Length = 1205 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||||| | | || || |||||||||||||| || ||||||||| Sbjct: 478 aacataatggacatgaaagcaagcatgggttcctttgctgctgctctgaaagaaaaagat 537 Query: 275 gtatgggtgatgaa 288 || ||||| ||||| Sbjct: 538 gtttgggttatgaa 551 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 46 gggaagtggattggctccttggcctgcccgattaac 81 |||||||||||||||||| ||||| || |||||||| Sbjct: 309 gggaagtggattggctccatggccagctcgattaac 344 Score = 40.1 bits (20), Expect = 9.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 435 agaaaagaggttgcagtgctgaagatctgctccttgaaatggatcgtatact 486 |||| ||||||||||| || |||||| |||| | || |||||||||||||| Sbjct: 698 agaagagaggttgcagcgcagaagatttgctgttggagatggatcgtatact 749
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||||| | | || || |||||||||||||| || ||||||||| Sbjct: 26424 aacataatggacatgaaagcaagcatgggctcttttgctgctgctctgaaagaaaaagat 26365 Query: 275 gtatgggtgatgaa 288 || ||||| ||||| Sbjct: 26364 gtctgggtaatgaa 26351
>gb|AY091393.1| Arabidopsis thaliana putative ankyrin protein (At4g14360) mRNA, complete cds Length = 1858 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||||| | | || || |||||||||||||| || ||||||||| Sbjct: 1360 aacataatggacatgaaagcaagcatgggctcttttgctgctgctctgaaagaaaaagat 1419 Query: 275 gtatgggtgatgaa 288 || ||||| ||||| Sbjct: 1420 gtctgggtaatgaa 1433
>gb|AY059747.1| Arabidopsis thaliana putative ankyrin protein (At4g14360) mRNA, complete cds Length = 2421 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||||| | | || || |||||||||||||| || ||||||||| Sbjct: 1732 aacataatggacatgaaagcaagcatgggctcttttgctgctgctctgaaagaaaaagat 1791 Query: 275 gtatgggtgatgaa 288 || ||||| ||||| Sbjct: 1792 gtctgggtaatgaa 1805
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||||| | | || || |||||||||||||| || ||||||||| Sbjct: 165864 aacataatggacatgaaagcaagcatgggctcttttgctgctgctctgaaagaaaaagat 165805 Query: 275 gtatgggtgatgaa 288 || ||||| ||||| Sbjct: 165804 gtctgggtaatgaa 165791
>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24 Length = 87487 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||||| | | || || |||||||||||||| || ||||||||| Sbjct: 7931 aacataatggacatgaaagcaagcatgggttcctttgctgctgctctgaaagaaaaagat 7990 Query: 275 gtatgggtgatgaa 288 || ||||| ||||| Sbjct: 7991 gtttgggttatgaa 8004 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 46 gggaagtggattggctccttggcctgcccgattaac 81 |||||||||||||||||| ||||| || |||||||| Sbjct: 7668 gggaagtggattggctccatggccagctcgattaac 7703 Score = 40.1 bits (20), Expect = 9.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 435 agaaaagaggttgcagtgctgaagatctgctccttgaaatggatcgtatact 486 |||| ||||||||||| || |||||| |||| | || |||||||||||||| Sbjct: 8237 agaagagaggttgcagcgcagaagatttgctgttggagatggatcgtatact 8288
>gb|BT013643.1| Lycopersicon esculentum clone 132448F, mRNA sequence Length = 2253 Score = 65.9 bits (33), Expect = 2e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 212 agaaacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaa 271 ||||| |||||||||||||| || || | || ||||||||||||||| | ||||| ||| Sbjct: 1439 agaaatatcatggacatgaaggccaatatggggtcatttgctgctgctttgaaggacaaa 1498 Query: 272 gatgtatgggtgatgaacgccgtgtcccatgatggaccaaacactcttaagat 324 ||||| ||||| ||||||| || || | |||||||| |||||||| ||||| Sbjct: 1499 gatgtttgggtcatgaacgttgtacccaaagatggacctaacactctcaagat 1551
>ref|NM_100323.2| Arabidopsis thaliana unknown protein AT1G04430 mRNA, complete cds Length = 2360 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 360 actggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtgg 415 ||||||||||||| |||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 1791 actggtgtgaggctttctctacatatcctcgaacatacgatctgttgcacgcgtgg 1846 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||| || | || || || || |||||||| || || |||||| Sbjct: 1646 aacataatggacatgaaagctcacatgggttctttcgcagctgctcttaaagacaaagat 1705 Query: 275 gtatgggtgatgaacg 290 || ||||||||||||| Sbjct: 1706 gtgtgggtgatgaacg 1721
>gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete sequence Length = 129053 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 221 atggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagatgtatgg 280 ||||| |||||||||||| | || |||||||| |||||||| || || |||||||| ||| Sbjct: 58664 atggatatgaaagcaaacctgggttcatttgcagctgctcttaaagacaaagatgtttgg 58605 Query: 281 gtgatgaa 288 |||||||| Sbjct: 58604 gtgatgaa 58597
>gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete sequence Length = 117666 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 221 atggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagatgtatgg 280 ||||| |||||||||||| | || |||||||| |||||||| || || |||||||| ||| Sbjct: 92992 atggatatgaaagcaaacctgggttcatttgcagctgctcttaaagacaaagatgtttgg 93051 Query: 281 gtgatgaa 288 |||||||| Sbjct: 93052 gtgatgaa 93059
>gb|AY081460.1| Arabidopsis thaliana unknown protein (At1g04430) mRNA, complete cds Length = 1923 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 360 actggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtgg 415 ||||||||||||| |||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 1529 actggtgtgaggctttctctacatatcctcgaacatacgatctgttgcacgcgtgg 1584 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||| || | || || || || |||||||| || || |||||| Sbjct: 1384 aacataatggacatgaaagctcacatgggttctttcgcagctgctcttaaagacaaagat 1443 Query: 275 gtatgggtgatgaacg 290 || ||||||||||||| Sbjct: 1444 gtgtgggtgatgaacg 1459
>gb|AY064624.1| Arabidopsis thaliana unknown protein (At1g04430; F19P19.11) mRNA, complete cds Length = 1892 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 360 actggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtgg 415 ||||||||||||| |||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 1529 actggtgtgaggctttctctacatatcctcgaacatacgatctgttgcacgcgtgg 1584 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||| || | || || || || |||||||| || || |||||| Sbjct: 1384 aacataatggacatgaaagctcacatgggttctttcgcagctgctcttaaagacaaagat 1443 Query: 275 gtatgggtgatgaacg 290 || ||||||||||||| Sbjct: 1444 gtgtgggtgatgaacg 1459
>dbj|AK222007.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-66-E03 Length = 877 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 360 actggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtgg 415 ||||||||||||| |||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 393 actggtgtgaggctttctctacatatcctcgaacatacgatctgttgcacgcgtgg 448 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||| || | || || || || |||||||| || || |||||| Sbjct: 248 aacataatggacatgaaagctcacatgggttctttcgcagctgctcttaaagacaaagat 307 Query: 275 gtatgggtgatgaacg 290 || ||||||||||||| Sbjct: 308 gtgtgggtgatgaacg 323
>gb|AY054530.1| Arabidopsis thaliana Unknown protein (At1g04430; F19P19.11) mRNA, complete cds Length = 2172 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 360 actggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtgg 415 ||||||||||||| |||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 1667 actggtgtgaggctttctctacatatcctcgaacatacgatctgttgcacgcgtgg 1722 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||| || | || || || || |||||||| || || |||||| Sbjct: 1522 aacataatggacatgaaagctcacatgggttctttcgcagctgctcttaaagacaaagat 1581 Query: 275 gtatgggtgatgaacg 290 || ||||||||||||| Sbjct: 1582 gtgtgggtgatgaacg 1597
>gb|AF387011.1|AF387011 Arabidopsis thaliana Unknown protein (F19P19.11) mRNA, complete cds Length = 2175 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 360 actggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtgg 415 ||||||||||||| |||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 1704 actggtgtgaggctttctctacatatcctcgaacatacgatctgttgcacgcgtgg 1759 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||| || | || || || || |||||||| || || |||||| Sbjct: 1559 aacataatggacatgaaagctcacatgggttctttcgcagctgctcttaaagacaaagat 1618 Query: 275 gtatgggtgatgaacg 290 || ||||||||||||| Sbjct: 1619 gtgtgggtgatgaacg 1634
>gb|AY084457.1| Arabidopsis thaliana clone 108617 mRNA, complete sequence Length = 2070 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 360 actggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtgg 415 ||||||||||||| |||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 1717 actggtgtgaggctttctctacatatcctcgaacatacgatctgttgcacgcgtgg 1772 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Plus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||| || | || || || || |||||||| || || |||||| Sbjct: 1572 aacataatggacatgaaagctcacatgggttctttcgcagctgctcttaaagacaaagat 1631 Query: 275 gtatgggtgatgaacg 290 || ||||||||||||| Sbjct: 1632 gtgtgggtgatgaacg 1647
>gb|BT012736.1| Lycopersicon esculentum clone 113674R, mRNA sequence Length = 2362 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcctcgaacgtatgatcttctgca 408 ||||||||||||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 1595 catgactggtgtgaggctttctcaacatatcctcggacatacgatcttctgca 1647
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 107527 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 363 ggtgtgaggcattctctacttatcctcgaacgtatgatcttctgcacgcgtgg 415 |||||||||| |||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 32243 ggtgtgaggctttctctacatatcctcgaacatacgatctgttgcacgcgtgg 32191 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Minus Query: 215 aacatcatggacatgaaagcaaactttggatcatttgctgctgctctcaaggaaaaagat 274 ||||| |||||||||||||| || | || || || || |||||||| || || |||||| Sbjct: 32489 aacataatggacatgaaagctcacatgggttctttcgcagctgctcttaaagacaaagat 32430 Query: 275 gtatgggtgatgaacg 290 || ||||||||||||| Sbjct: 32429 gtgtgggtgatgaacg 32414
>ref|XM_473548.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1761 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcctcgaacgtatgatct 402 ||||||||||||||| | ||||| ||||||||||| || |||||||| Sbjct: 1441 catgactggtgtgagcctttctcaacttatcctcgtacctatgatct 1487
>gb|BT013574.1| Lycopersicon esculentum clone 132316F, mRNA sequence Length = 2359 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcctcgaacgtatgatct 402 ||||||||||||||||| || || || ||||||||||| |||||||| Sbjct: 1681 catgactggtgtgaggctttttcgacctatcctcgaacatatgatct 1727
>ref|NM_202090.1| Arabidopsis thaliana unknown protein AT1G13860 transcript variant AT1G13860.4 mRNA, complete cds Length = 2629 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 355 acatgactggtgtgaggcattctctacttatcctcgaacgtatga 399 ||||||||||||||| ||||| |||| ||||||||||| ||||| Sbjct: 2038 acatgactggtgtgaaccattccctacctatcctcgaacatatga 2082
>ref|NM_179326.1| Arabidopsis thaliana unknown protein AT1G13860 transcript variant AT1G13860.3 mRNA, complete cds Length = 2636 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 355 acatgactggtgtgaggcattctctacttatcctcgaacgtatga 399 ||||||||||||||| ||||| |||| ||||||||||| ||||| Sbjct: 2038 acatgactggtgtgaaccattccctacctatcctcgaacatatga 2082
>ref|NM_101252.2| Arabidopsis thaliana unknown protein AT1G13860 transcript variant AT1G13860.1 mRNA, complete cds Length = 2774 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 355 acatgactggtgtgaggcattctctacttatcctcgaacgtatga 399 ||||||||||||||| ||||| |||| ||||||||||| ||||| Sbjct: 2038 acatgactggtgtgaaccattccctacctatcctcgaacatatga 2082
>ref|NM_179325.2| Arabidopsis thaliana S-adenosylmethionine-dependent methyltransferase AT1G13860 transcript variant AT1G13860.2 mRNA, complete cds Length = 2528 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 355 acatgactggtgtgaggcattctctacttatcctcgaacgtatga 399 ||||||||||||||| ||||| |||| ||||||||||| ||||| Sbjct: 1958 acatgactggtgtgaaccattccctacctatcctcgaacatatga 2002
>emb|BX816641.1|CNS0AELL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH5ZG05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2432 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 355 acatgactggtgtgaggcattctctacttatcctcgaacgtatga 399 ||||||||||||||| ||||| |||| ||||||||||| ||||| Sbjct: 1923 acatgactggtgtgaaccattccctacctatcctcgaacatatga 1967
>emb|BX824598.1|CNS0A7DT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZD03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2293 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 45 ggggaagtggattggctccttggcctgcccgattaac 81 ||||||||||||||||||| ||||| || |||||||| Sbjct: 1416 ggggaagtggattggctccatggccagctcgattaac 1452 Score = 40.1 bits (20), Expect = 9.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 435 agaaaagaggttgcagtgctgaagatctgctccttgaaatggatcgtatact 486 |||| ||||||||||| || |||||| |||| | || |||||||||||||| Sbjct: 1806 agaagagaggttgcagcgcagaagatttgctgttggagatggatcgtatact 1857 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 253 tgctgctctcaaggaaaaagatgtatgggtgatgaa 288 ||||||||| || ||||||||||| ||||| ||||| Sbjct: 1624 tgctgctctgaaagaaaaagatgtttgggttatgaa 1659
>dbj|AK117344.1| Arabidopsis thaliana At1g13860 mRNA for unknown protein, complete cds, clone: RAFL16-90-N03 Length = 2745 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 355 acatgactggtgtgaggcattctctacttatcctcgaacgtatga 399 ||||||||||||||| ||||| |||| ||||||||||| ||||| Sbjct: 2038 acatgactggtgtgaaccattccctacctatcctcgaacatatga 2082
>dbj|AK121243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099B06, full insert sequence Length = 2310 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctactta 384 ||||||||||||||||||||||| ||||| Sbjct: 1709 catgactggtgtgaggcattctccactta 1737
>ref|NM_102449.2| Arabidopsis thaliana unknown protein AT1G26850 transcript variant AT1G26850.1 mRNA, complete cds Length = 2420 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcc 387 ||||||||||||||||| |||||||| ||||| Sbjct: 1836 catgactggtgtgaggctttctctacatatcc 1867
>ref|NM_179379.1| Arabidopsis thaliana unknown protein AT1G26850 transcript variant AT1G26850.2 mRNA, complete cds Length = 2361 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcc 387 ||||||||||||||||| |||||||| ||||| Sbjct: 1777 catgactggtgtgaggctttctctacatatcc 1808
>gb|BT000640.1| Arabidopsis thaliana At1g26850/T2P11_4 mRNA, complete cds Length = 1851 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcc 387 ||||||||||||||||| |||||||| ||||| Sbjct: 1540 catgactggtgtgaggctttctctacatatcc 1571
>emb|AJ810709.1| Poa pratensis mRNA for Ankyrin protein kinase-like (apk gene) Length = 2703 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcc 387 |||||||||||||| || |||||||||||||| Sbjct: 1849 catgactggtgtgaagctttctctacttatcc 1880 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaaacatcatggacatgaa 231 |||||||||||||||||||| Sbjct: 1702 agaaacatcatggacatgaa 1721
>gb|AY037230.1| Arabidopsis thaliana At1g26850/T2P11_4 mRNA, complete cds Length = 2296 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcc 387 ||||||||||||||||| |||||||| ||||| Sbjct: 1836 catgactggtgtgaggctttctctacatatcc 1867
>gb|AY106619.1| Zea mays PCO092688 mRNA sequence Length = 560 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcctcgaacgtatgatctt 403 |||||||||||||| ||||||| || |||||||| || ||||||||| Sbjct: 164 catgactggtgtgaaccattctcaacgtatcctcgtacctatgatctt 211
>ref|XM_474908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 359 gactggtgtgaggcattctctac 381 ||||||||||||||||||||||| Sbjct: 541 gactggtgtgaggcattctctac 563
>dbj|AK065174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D01, full insert sequence Length = 2791 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 359 gactggtgtgaggcattctctac 381 ||||||||||||||||||||||| Sbjct: 2058 gactggtgtgaggcattctctac 2080
>ref|NM_201681.1| Arabidopsis thaliana unknown protein AT2G03480 transcript variant AT2G03480.2 mRNA, complete cds Length = 2411 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 355 acatgactggtgtgaggcattctctacttatcctcgaacgtatga 399 ||||||||||||||| ||||| | || ||||||||||| ||||| Sbjct: 1817 acatgactggtgtgaaccattcccgacatatcctcgaacatatga 1861
>ref|NM_126399.2| Arabidopsis thaliana ATP binding AT2G03480 transcript variant AT2G03480.1 mRNA, complete cds Length = 2444 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 355 acatgactggtgtgaggcattctctacttatcctcgaacgtatga 399 ||||||||||||||| ||||| | || ||||||||||| ||||| Sbjct: 1850 acatgactggtgtgaaccattcccgacatatcctcgaacatatga 1894
>ref|NM_111855.2| Arabidopsis thaliana unknown protein AT3G10200 mRNA, complete cds Length = 1951 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcctcgaacgtatgat 400 ||||| ||||||||||| ||||| || ||||| || ||||||||| Sbjct: 1475 catgattggtgtgaggcgttctcaacatatccacgcacgtatgat 1519
>gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosome 5, complete sequence Length = 215766 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 ccatgatggaccaaacactct 318 ||||||||||||||||||||| Sbjct: 47704 ccatgatggaccaaacactct 47684
>gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, complete sequence Length = 215786 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 ccatgatggaccaaacactct 318 ||||||||||||||||||||| Sbjct: 168083 ccatgatggaccaaacactct 168103
>gb|BT001040.1| Arabidopsis thaliana At2g03480/T4M8.9 mRNA, complete cds Length = 1185 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 355 acatgactggtgtgaggcattctctacttatcctcgaacgtatga 399 ||||||||||||||| ||||| | || ||||||||||| ||||| Sbjct: 852 acatgactggtgtgaaccattcccgacatatcctcgaacatatga 896
>gb|AY039849.1| Arabidopsis thaliana At2g03480/T4M8.9 mRNA, complete cds Length = 2560 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 355 acatgactggtgtgaggcattctctacttatcctcgaacgtatga 399 ||||||||||||||| ||||| | || ||||||||||| ||||| Sbjct: 1967 acatgactggtgtgaaccattcccgacatatcctcgaacatatga 2011
>gb|BT005741.1| Arabidopsis thaliana clone RAFL15-40-C20 (R50008) unknown protein (At3g10200) mRNA, complete cds Length = 1970 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcctcgaacgtatgat 400 ||||| ||||||||||| ||||| || ||||| || ||||||||| Sbjct: 1475 catgattggtgtgaggcgttctcaacatatccacgcacgtatgat 1519
>gb|AC011745.4|AC011745 Homo sapiens BAC clone RP11-329C15 from Y, complete sequence Length = 149525 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 caaactttggatcatttgctg 254 ||||||||||||||||||||| Sbjct: 47374 caaactttggatcatttgctg 47394
>dbj|AK102287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089J21, full insert sequence Length = 2371 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 359 gactggtgtgaggcattctctacttatcctcgaacgtatgatctt 403 |||||||| || || ||||||||||| || |||||||||||||| Sbjct: 1785 gactggtgcgaagctttctctacttacccaagaacgtatgatctt 1829
>gb|DQ332727.1| Synthetic construct Saccharomyces cerevisiae clone FLH112735.01X YFL049W gene, complete sequence Length = 1872 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 608 tctgaggagaacgaaatgata 628 ||||||||||||||||||||| Sbjct: 1195 tctgaggagaacgaaatgata 1215
>gb|CP000198.1| Drosophila melanogaster genomic scaffold 211000022280716 Length = 133267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 tgaaaaagatacggaaatgtg 150 ||||||||||||||||||||| Sbjct: 85808 tgaaaaagatacggaaatgtg 85788
>dbj|AP001496.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-835E18, complete sequence Length = 179358 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 435 agaaaagaggttgcagtgctgaagatctg 463 ||||| ||||||||||||||||| ||||| Sbjct: 57706 agaaatgaggttgcagtgctgaaaatctg 57734
>dbj|D50617.1|YSCCHRVIN Saccharomyces cerevisiae chromosome VI complete DNA sequence Length = 270148 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 608 tctgaggagaacgaaatgata 628 ||||||||||||||||||||| Sbjct: 37997 tctgaggagaacgaaatgata 38017
>gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome 7, complete sequence Length = 227709 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 cagtgctgaagatctgctcc 467 |||||||||||||||||||| Sbjct: 119810 cagtgctgaagatctgctcc 119791
>gb|AC005179.1| Homo sapiens chromosome 5, P1 clone 1041F10 (LBNL H88), complete sequence Length = 59765 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 aaacatcatggacatgaaag 233 |||||||||||||||||||| Sbjct: 4773 aaacatcatggacatgaaag 4754
>gb|U41015.2| Caenorhabditis elegans cosmid F20B6, complete sequence Length = 39499 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tgaaaaagatacggaaatgt 149 |||||||||||||||||||| Sbjct: 30513 tgaaaaagatacggaaatgt 30494
>gb|AC122383.4| Mus musculus BAC clone RP23-479O8 from chromosome 7, complete sequence Length = 196195 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gataattactggaatttatt 183 |||||||||||||||||||| Sbjct: 104108 gataattactggaatttatt 104089
>gb|AC091770.5| Homo sapiens BAC clone RP11-655M5 from 7, complete sequence Length = 93543 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tagataattactggaattta 181 |||||||||||||||||||| Sbjct: 91469 tagataattactggaattta 91450
>gb|AC133864.32| Medicago truncatula clone mth2-18d12, complete sequence Length = 125734 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 ggaaaaagatgtatgggtga 284 |||||||||||||||||||| Sbjct: 93963 ggaaaaagatgtatgggtga 93944
>gb|AC068768.31| Homo sapiens 12 BAC RP11-282O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 87758 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 atgaaagcaaactttggatc 246 |||||||||||||||||||| Sbjct: 35945 atgaaagcaaactttggatc 35964
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 40.1 bits (20), Expect = 9.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 363 ggtgtgaggcattctctacttatcctcgaacgtatgatct 402 |||||||| | ||||| ||||||||||| || |||||||| Sbjct: 110616 ggtgtgagcctttctcaacttatcctcgtacctatgatct 110577
>emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo-8-phosphate synthase, exons 1-4 Length = 1812 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 628 actcataatcagaaagaaat 647 |||||||||||||||||||| Sbjct: 427 actcataatcagaaagaaat 408
>dbj|AB201426.1| Dioscorea japonica DNA, microsatellite locus DIJ0222 Length = 632 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 ctctcaaggaaaaagatgtatggg 281 |||||||||||||| ||||||||| Sbjct: 78 ctctcaaggaaaaaaatgtatggg 55
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 363 ggtgtgaggcattctctacttatcctcgaacgtatgatct 402 |||||||| | ||||| ||||||||||| || |||||||| Sbjct: 28619826 ggtgtgagcctttctcaacttatcctcgtacctatgatct 28619787
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 atcatcgtgagagacaaggc 522 |||||||||||||||||||| Sbjct: 20389085 atcatcgtgagagacaaggc 20389066
>gb|AC011481.4|AC011481 Homo sapiens chromosome 19 clone CTB-129P6, complete sequence Length = 107567 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cagggatgggggaagtggat 56 |||||||||||||||||||| Sbjct: 20113 cagggatgggggaagtggat 20132
>ref|XM_312581.2| Anopheles gambiae str. PEST ENSANGP00000015033 (ENSANGG00000012544), mRNA Length = 583 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 ttgaaatggatcgtatactc 487 |||||||||||||||||||| Sbjct: 240 ttgaaatggatcgtatactc 221
>gb|AY107453.1| Zea mays PCO116376 mRNA sequence Length = 587 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 356 catgactggtgtgaggcattctctacttatcc 387 |||||||||||||| | |||||||||||||| Sbjct: 12 catgactggtgtgaagggttctctacttatcc 43
>gb|AC123620.14| Mus musculus chromosome 12, clone RP23-53J21, complete sequence Length = 182783 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 624 tgatactcataatcagaaag 643 |||||||||||||||||||| Sbjct: 116032 tgatactcataatcagaaag 116051
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 atcatcgtgagagacaaggc 522 |||||||||||||||||||| Sbjct: 20315299 atcatcgtgagagacaaggc 20315280
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 atcatcgtgagagacaaggc 522 |||||||||||||||||||| Sbjct: 122616 atcatcgtgagagacaaggc 122635
>emb|AL645687.13| Mouse DNA sequence from clone RP23-478H15 on chromosome 11, complete sequence Length = 156174 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 aaatgcacagggatggggga 49 |||||||||||||||||||| Sbjct: 71194 aaatgcacagggatggggga 71213 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,074,629 Number of Sequences: 3902068 Number of extensions: 7074629 Number of successful extensions: 151627 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 151240 Number of HSP's gapped (non-prelim): 362 length of query: 657 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 634 effective length of database: 17,143,297,704 effective search space: 10868850744336 effective search space used: 10868850744336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
