ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags25j02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476711.1| Oryza sativa (japonica cultivar-group), mRNA 145 2e-31
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
3dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
4gb|DQ119301.1| Oryza sativa (indica cultivar-group) putative ubi... 98 4e-17
5dbj|AK067123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
6dbj|AK059481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
7gb|BT016292.1| Zea mays clone Contig125 mRNA sequence 70 8e-09
8gb|AY104649.1| Zea mays PCO133877 mRNA sequence 70 8e-09
9emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6... 64 5e-07
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
12emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb... 64 5e-07
13ref|XM_468083.1| Oryza sativa (japonica cultivar-group), mRNA 60 8e-06
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
15dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
16dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
17dbj|AK100242.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
18gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
19dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
20gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
21ref|XM_468082.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
22dbj|AK058466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
23dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone... 52 0.002
24ref|NM_120743.2| Arabidopsis thaliana UBP12 (UBIQUITIN-SPECIFIC ... 46 0.12
25ref|NM_180452.1| Arabidopsis thaliana UBP12 (UBIQUITIN-SPECIFIC ... 46 0.12
26gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC... 46 0.12
27gb|AY142616.1| Arabidopsis thaliana putative ubiquitin-specific ... 46 0.12
28gb|AF360198.1| Arabidopsis thaliana putative ubiquitin-specific ... 46 0.12
29gb|AF302663.1|AF302663 Arabidopsis thaliana ubiquitin-specific p... 46 0.12
30ref|NM_112024.3| Arabidopsis thaliana cysteine-type endopeptidas... 44 0.48
31gb|AC122252.4| Mus musculus BAC clone RP23-170E7 from chromosome... 44 0.48
32gb|AC123675.7| Mus musculus chromosome 15, clone RP23-271I6, com... 44 0.48
33gb|AC069564.34| Mus musculus strain C57BL/6J chromosome 17 clone... 44 0.48
34emb|AL583783.6| Human DNA sequence from clone RP11-75N6 on chrom... 44 0.48
35gb|AY064010.1| Arabidopsis thaliana At3g11910 mRNA sequence 44 0.48
36gb|AC002470.17| Homo sapiens Chromosome 22q11.2 BAC Clone b135h6... 44 0.48
37gb|BT002760.1| Arabidopsis thaliana clone C105177 putative ubiqu... 44 0.48
38gb|AY111375.1| Zea mays CL38709_1 mRNA sequence 44 0.48
39gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosom... 42 1.9
40gb|AC125403.4| Mus musculus BAC clone RP23-4E15 from 1, complete... 42 1.9
41emb|AL022400.8|HS809F4 Human DNA sequence from clone RP4-809F4 o... 42 1.9
42emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g... 42 1.9
43gb|AC138664.17| Mus musculus chromosome 3, clone RP24-289J19, co... 42 1.9
44gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, comple... 42 1.9
45dbj|BS000189.1| Pan troglodytes chromosome 22 clone:PTB-016G16, ... 42 1.9
46emb|AL929208.9| Zebrafish DNA sequence from clone DKEY-56P7 in l... 42 1.9
47gb|AC133166.2| Mus musculus BAC clone RP24-186D13 from 1, comple... 42 1.9
48gb|AC100734.4| Mus musculus chromosome 15, clone RP24-316L11, co... 40 7.5
49gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
50gb|AC145615.3| Homo sapiens BAC clone RP11-1217H2 from UL, compl... 40 7.5
51gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.5
52gb|AC109269.17| Mus musculus chromosome 1, clone RP23-325F17, co... 40 7.5
53gb|AC125527.3| Mus musculus BAC clone RP24-550H17 from chromosom... 40 7.5
54gb|AC126682.3| Mus musculus BAC clone RP23-8E3 from 15, complete... 40 7.5
55gb|AC153656.4| Mus musculus BAC clone RP23-428O19 from chromosom... 40 7.5
56gb|AC005526.20| Mus musculus strain 129S6/SvEvTac clone rp21-455... 40 7.5
57gb|AC121236.18| Medicago truncatula clone mth2-12m19, complete s... 40 7.5
58gb|AC151964.12| Medicago truncatula clone mth2-47g17, complete s... 40 7.5
59emb|AL358453.8| Human DNA sequence from clone RP11-115M14 on chr... 40 7.5
60emb|AL161902.12| Human DNA sequence from clone RP11-66B8 on chro... 40 7.5
61emb|AL135932.7| Human DNA sequence from clone RP4-535H23 on chro... 40 7.5
62gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, co... 40 7.5
63emb|BX537110.7| Zebrafish DNA sequence from clone CH211-205J18 i... 40 7.5
64emb|CR381654.7| Zebrafish DNA sequence from clone DKEY-30K9 in l... 40 7.5
65gb|AC161347.2| Mus musculus chromosome 15, clone RP23-273M5, com... 40 7.5
66emb|BX510918.13| Zebrafish DNA sequence from clone CH211-249O9 i... 40 7.5
67gb|AC112778.7| Homo sapiens X BAC RP11-629O4 (Roswell Park Cance... 40 7.5
68gb|AC112919.5| Homo sapiens X BAC RP11-294J19 (Roswell Park Canc... 40 7.5
69gb|AC182397.3| Pan troglodytes BAC clone CH251-345O12 from chrom... 40 7.5
70gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell... 40 7.5
71gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
72gb|AC013284.9| Homo sapiens chromosome 10 clone RP11-13E1, compl... 40 7.5
73gb|AC092342.3| Homo sapiens chromosome 16 clone RP11-264M14, com... 40 7.5
74gb|AC068933.11| Homo sapiens chromosome 8, clone RP11-760J15, co... 40 7.5
75gb|AC007028.3| Homo sapiens chromosome 16 clone RP5-835P2, compl... 40 7.5
76gb|AC026739.7| Homo sapiens chromosome 5 clone CTD-2580L4, compl... 40 7.5
77gb|AC069282.6| Homo sapiens BAC clone RP11-61L9 from 7, complete... 40 7.5
78gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nippo... 40 7.5
79dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
80dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
81gb|AC027657.2|AC027657 Oryza sativa (japonica cultivar-group) ch... 40 7.5
82gb|AC108019.3| Homo sapiens BAC clone RP11-5K16 from 4, complete... 40 7.5
83gb|AC096731.3| Homo sapiens BAC clone RP11-72C15 from 4, complet... 40 7.5
84gb|AC141248.2| Homo sapiens chromosome 16 clone RP11-1251B5, com... 40 7.5
85gb|AC120381.13| Mus musculus chromosome 5, clone RP24-266G11, co... 40 7.5
86gb|AC158158.6| Mus musculus chromosome 1, clone RP23-10D8, compl... 40 7.5
87gb|AC140890.2| Homo sapiens chromosome 16 clone RP11-188D24, com... 40 7.5
88gb|AC013272.5| Homo sapiens BAC clone RP11-401C13 from 2, comple... 40 7.5
89gb|AC018892.8| Homo sapiens BAC clone RP11-499E14 from 2, comple... 40 7.5
90gb|AC004902.2|AC004902 Homo sapiens PAC clone RP5-823F17 from 7q... 40 7.5
91gb|AC160020.1| Homo sapiens BAC clone RP11-540L21 from 2, comple... 40 7.5
92gb|AC013734.4|AC013734 Homo sapiens BAC clone RP11-557B9 from Y,... 40 7.5
93gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.5
94gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, comp... 40 7.5
95gb|AC136877.2| Homo sapiens chromosome 16 clone RP11-1258I11, co... 40 7.5
96gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis tha... 40 7.5
97emb|BX276128.8| Zebrafish DNA sequence from clone CH211-215C18 i... 40 7.5
98dbj|BS000085.1| Pan troglodytes chromosome 22 clone:RP43-164H01,... 40 7.5
99gb|AC114594.15| Mus musculus chromosome 1, clone RP23-81J19, com... 40 7.5
100emb|AL136018.4|CNS01DVS Human chromosome 14 DNA sequence BAC R-1... 40 7.5
101gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70... 40 7.5
102dbj|AP001686.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.5
103gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
104gb|AC126049.3| Mus musculus BAC clone RP23-224I16 from 1, comple... 40 7.5
105gb|AC147041.3| Mus musculus BAC clone RP23-129J8 from 15, comple... 40 7.5
106dbj|AP001116.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 7.5 
>ref|XM_476711.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3351

 Score =  145 bits (73), Expect = 2e-31
 Identities = 118/133 (88%)
 Strand = Plus / Plus

                                                                        
Query: 367  gttgacctgtcccatcctgatgctgaacttagattgcttgaagtattctaccacaaaata 426
            ||||| ||||| |||||| ||||||| |||||| | ||||| || ||||| ||||| |||
Sbjct: 2818 gttgagctgtctcatcctaatgctgagcttagactacttgaggttttctatcacaagata 2877

                                                                        
Query: 427  tacaagatttttgcacccactgaaaagatagaaaacatcaacgatcagtactggacacta 486
            ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| || 
Sbjct: 2878 tacaagatttttgcaccgaatgaaaagatagaaaacatcaatgatcagtactggaccctg 2937

                         
Query: 487  cgtgcagaggagg 499
            |||||||||||||
Sbjct: 2938 cgtgcagaggagg 2950
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                           
Query: 431     agatttttgcacccactgaaaagatagaaaacatcaacgatcagtactggacactacgtg 490
               ||||||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||
Sbjct: 3453500 agatttttgcaccgaatgaaaagatagaaaacatcaatgatcagtactggaccctgcgtg 3453559

                        
Query: 491     cagaggagg 499
               |||||||||
Sbjct: 3453560 cagaggagg 3453568



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                           
Query: 270     tgttttaccaggtgtttgttcacagtataagattgccaaaaaatagcatggttggtgatg 329
               |||||||||||||||  ||||||||||| || |||||||| || ||||  || |||||||
Sbjct: 3453149 tgttttaccaggtgtcagttcacagtattaggttgccaaagaacagcactgtcggtgatg 3453208

                
Query: 330     t 330
               |
Sbjct: 3453209 t 3453209
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>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0428D12
          Length = 141678

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                         
Query: 431   agatttttgcacccactgaaaagatagaaaacatcaacgatcagtactggacactacgtg 490
             ||||||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||
Sbjct: 93320 agatttttgcaccgaatgaaaagatagaaaacatcaatgatcagtactggaccctgcgtg 93379

                      
Query: 491   cagaggagg 499
             |||||||||
Sbjct: 93380 cagaggagg 93388



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 270   tgttttaccaggtgtttgttcacagtataagattgccaaaaaatagcatggttggtgatg 329
             |||||||||||||||  ||||||||||| || |||||||| || ||||  || |||||||
Sbjct: 92969 tgttttaccaggtgtcagttcacagtattaggttgccaaagaacagcactgtcggtgatg 93028

              
Query: 330   t 330
             |
Sbjct: 93029 t 93029
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>gb|DQ119301.1| Oryza sativa (indica cultivar-group) putative ubiquitin protease
           mRNA, partial cds
          Length = 1593

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 114/133 (85%), Gaps = 2/133 (1%)
 Strand = Plus / Plus

                                                                       
Query: 367 gttgacctgtcccatcctgatgctgaacttagattgcttgaagtattctaccacaaaata 426
           ||||| |||||| ||||||||||||||||  | ||||||||||||||||| ||||| || 
Sbjct: 517 gttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctatcacaagatt 576

                                                                       
Query: 427 tacaagatttttgcacc-cactgaaaagatagaaaacatcaacgatcagtactggacact 485
           || ||||| ||| |||| ||| || || ||||| ||||| || |||||||||||||||||
Sbjct: 577 tataagatatttccacctcac-gagaaaatagagaacataaatgatcagtactggacact 635

                        
Query: 486 acgtgcagaggag 498
           |||||| ||||||
Sbjct: 636 acgtgctgaggag 648
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>dbj|AK067123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096M22, full
            insert sequence
          Length = 3975

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                        
Query: 415  taccacaaaatatacaagatttttgcacccactgaaaagatagaaaacatcaacgatcag 474
            |||||||| ||||| ||||||||| ||| |  ||| |||||||| || || || ||||||
Sbjct: 2860 taccacaagatatataagatttttccactccatgagaagatagagaatattaatgatcag 2919

                                    
Query: 475  tactggacactacgtgcagaggag 498
            ||||||||||||||||| ||||||
Sbjct: 2920 tactggacactacgtgctgaggag 2943
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>dbj|AK059481.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F05, full
           insert sequence
          Length = 1098

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 415 taccacaaaatatacaagatttttgcacccactgaaaagatagaaaacatcaacgatcag 474
           |||||||| ||||| ||||||||| ||| |  ||| |||||||| || || || ||||||
Sbjct: 23  taccacaagatatataagatttttccactccatgagaagatagagaatattaatgatcag 82

                                   
Query: 475 tactggacactacgtgcagaggag 498
           ||||||||||||||||| ||||||
Sbjct: 83  tactggacactacgtgctgaggag 106
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>gb|BT016292.1| Zea mays clone Contig125 mRNA sequence
          Length = 1106

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                       
Query: 400 ttgcttgaagtattctaccacaaaatatacaagatttttgcacccactgaaaagatagaa 459
           |||||||||||||| |||||||| || || ||||| ||| ||||   ||| |||||||| 
Sbjct: 124 ttgcttgaagtattttaccacaagatttataagatctttccacctcatgagaagatagag 183

                                                  
Query: 460 aacatcaacgatcagtactggacactacgtgcagaggag 498
           ||||| || ||||||||||||||| |||| || ||||||
Sbjct: 184 aacataaatgatcagtactggacattacgagctgaggag 222
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>gb|AY104649.1| Zea mays PCO133877 mRNA sequence
          Length = 927

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                       
Query: 400 ttgcttgaagtattctaccacaaaatatacaagatttttgcacccactgaaaagatagaa 459
           |||||||||||||| |||||||| || || ||||| ||| ||||   ||| |||||||| 
Sbjct: 638 ttgcttgaagtattttaccacaagatttataagatctttccacctcatgagaagatagag 697

                                                  
Query: 460 aacatcaacgatcagtactggacactacgtgcagaggag 498
           ||||| || ||||||||||||||| |||| || ||||||
Sbjct: 698 aacataaatgatcagtactggacattacgagctgaggag 736
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>emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6, COMPLETE SEQUENCE
          Length = 127675

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                
Query: 381  tcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaag 432
            |||||||||||||||||| ||||||||||| || || ||||| |||||||||
Sbjct: 4041 tcctgatgctgaacttaggttgcttgaagtcttttatcacaagatatacaag 4092



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                      
Query: 442  cccactgaaaagatagaaaacatcaacgatcagtactggacactacgtgcagaggagg 499
            |||| ||||||||| |||||||| || || || |||||||||||||| || |||||||
Sbjct: 4302 cccaatgaaaagattgaaaacataaatgaccaatactggacactacgagccgaggagg 4359
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                        
Query: 367      gttgacctgtcccatcctgatgctgaacttagattgcttgaagtattctaccacaa 422
                ||||| |||||| ||||||||||||||||  | ||||||||||||||||| |||||
Sbjct: 18386489 gttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctatcacaa 18386544



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 454      atagaaaacatcaacgatcagtactggacactacgtgcagaggagg 499
                ||||| ||||| || ||||||||||||||||||||||| |||||||
Sbjct: 18386695 atagagaacataaatgatcagtactggacactacgtgctgaggagg 18386740
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                        
Query: 367      gttgacctgtcccatcctgatgctgaacttagattgcttgaagtattctaccacaa 422
                ||||| |||||| ||||||||||||||||  | ||||||||||||||||| |||||
Sbjct: 18312715 gttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctatcacaa 18312770



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 454      atagaaaacatcaacgatcagtactggacactacgtgcagaggagg 499
                ||||| ||||| || ||||||||||||||||||||||| |||||||
Sbjct: 18312921 atagagaacataaatgatcagtactggacactacgtgctgaggagg 18312966
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>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138585

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 367   gttgacctgtcccatcctgatgctgaacttagattgcttgaagtattctaccacaa 422
             ||||| |||||| ||||||||||||||||  | ||||||||||||||||| |||||
Sbjct: 38388 gttgaactgtccaatcctgatgctgaactccgcttgcttgaagtattctatcacaa 38443



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 454   atagaaaacatcaacgatcagtactggacactacgtgcagaggagg 499
             ||||| ||||| || ||||||||||||||||||||||| |||||||
Sbjct: 38594 atagagaacataaatgatcagtactggacactacgtgctgaggagg 38639
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>ref|XM_468083.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2350

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                       
Query: 111 tataatccttcttttattcagttttattgatatactacatgaagctcccctgtatggtca 170
           |||||| ||||||| ||  || ||||||||  | |||||||||||||| || | ||||||
Sbjct: 897 tataattcttctttcatgtaggtttattgacttgctacatgaagctcctctctctggtca 956

                                                     
Query: 171 ctgagagcccaggagcatagttagtggcaccttgtattgtat 212
             ||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 957 tcgagagcctagaagcattgttggtggcaccttgtactgtat 998
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                            
Query: 111      tataatccttcttttattcagttttattgatatactacatgaagctcccctgtatggtca 170
                |||||| ||||||| ||  || ||||||||  | |||||||||||||| || | ||||||
Sbjct: 32965069 tataattcttctttcatgtaggtttattgacttgctacatgaagctcctctctctggtca 32965128

                                                          
Query: 171      ctgagagcccaggagcatagttagtggcaccttgtattgtat 212
                  ||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 32965129 tcgagagcctagaagcattgttggtggcaccttgtactgtat 32965170
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>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_A01
          Length = 139121

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                         
Query: 111   tataatccttcttttattcagttttattgatatactacatgaagctcccctgtatggtca 170
             |||||| ||||||| ||  || ||||||||  | |||||||||||||| || | ||||||
Sbjct: 11009 tataattcttctttcatgtaggtttattgacttgctacatgaagctcctctctctggtca 11068

                                                       
Query: 171   ctgagagcccaggagcatagttagtggcaccttgtattgtat 212
               ||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 11069 tcgagagcctagaagcattgttggtggcaccttgtactgtat 11110
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>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1534_E09
          Length = 126209

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                          
Query: 111    tataatccttcttttattcagttttattgatatactacatgaagctcccctgtatggtca 170
              |||||| ||||||| ||  || ||||||||  | |||||||||||||| || | ||||||
Sbjct: 119810 tataattcttctttcatgtaggtttattgacttgctacatgaagctcctctctctggtca 119869

                                                        
Query: 171    ctgagagcccaggagcatagttagtggcaccttgtattgtat 212
                ||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 119870 tcgagagcctagaagcattgttggtggcaccttgtactgtat 119911
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>dbj|AK100242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055F23, full
           insert sequence
          Length = 2349

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 84/102 (82%)
 Strand = Plus / Plus

                                                                       
Query: 111 tataatccttcttttattcagttttattgatatactacatgaagctcccctgtatggtca 170
           |||||| ||||||| ||  || ||||||||  | |||||||||||||| || | ||||||
Sbjct: 896 tataattcttctttcatgtaggtttattgacttgctacatgaagctcctctctctggtca 955

                                                     
Query: 171 ctgagagcccaggagcatagttagtggcaccttgtattgtat 212
             ||||||| || ||||| ||| ||||||||||||| |||||
Sbjct: 956 tcgagagcctagaagcattgttggtggcaccttgtactgtat 997
to top
>gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0077M24, complete sequence
          Length = 128920

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                              
Query: 451   aagatagaaaacatcaacgatcagtactggacactacgtgcagaggagg 499
             |||||||| || || || ||||||||||||||||||||||| |||||||
Sbjct: 84207 aagatagagaatattaatgatcagtactggacactacgtgctgaggagg 84159
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                 
Query: 451      aagatagaaaacatcaacgatcagtactggacactacgtgcagaggagg 499
                |||||||| || || || ||||||||||||||||||||||| |||||||
Sbjct: 20649199 aagatagagaatattaatgatcagtactggacactacgtgctgaggagg 20649151
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                 
Query: 451      aagatagaaaacatcaacgatcagtactggacactacgtgcagaggagg 499
                |||||||| || || || ||||||||||||||||||||||| |||||||
Sbjct: 20959434 aagatagagaatattaatgatcagtactggacactacgtgctgaggagg 20959386
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>ref|XM_468082.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1777

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 145 ctacatgaagctcccctgtatggtcactgagagcccaggagcatagttagtggcaccttg 204
           |||||||||||||| || | ||||||  ||||||| || ||||| ||| |||||||||||
Sbjct: 398 ctacatgaagctcctctctctggtcatcgagagcctagaagcattgttggtggcaccttg 457

                   
Query: 205 tattgtat 212
           || |||||
Sbjct: 458 tactgtat 465
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>dbj|AK058466.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-A12, full
           insert sequence
          Length = 1777

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 145 ctacatgaagctcccctgtatggtcactgagagcccaggagcatagttagtggcaccttg 204
           |||||||||||||| || | ||||||  ||||||| || ||||| ||| |||||||||||
Sbjct: 398 ctacatgaagctcctctctctggtcatcgagagcctagaagcattgttggtggcaccttg 457

                   
Query: 205 tattgtat 212
           || |||||
Sbjct: 458 tactgtat 465
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>dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02D13, TM0546,
             complete sequence
          Length = 107979

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 442   cccactgaaaagatagaaaacatcaacgatcagtactggacactacgtgcagaggagg 499
             |||| ||||||||| |||| ||| || ||||| ||||||||| | |||||||||||||
Sbjct: 77882 cccaatgaaaagattgaaaccataaatgatcaatactggacattgcgtgcagaggagg 77825
to top
>ref|NM_120743.2| Arabidopsis thaliana UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12);
            cysteine-type endopeptidase/ double-stranded DNA binding
            / ubiquitin thiolesterase/ ubi> AT5G06600 (UBP12)
            transcript variant AT5G06600.1 mRNA, complete cds
          Length = 3898

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 379  catcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaagatttt 437
            ||||| ||||| ||||| |||||||| || || || |||||||| || |||||||||||
Sbjct: 2936 catccagatgcagaactgagattgctcgaggtgttttaccacaagatctacaagatttt 2994
to top
>ref|NM_180452.1| Arabidopsis thaliana UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12);
            cysteine-type endopeptidase/ double-stranded DNA binding
            / ubiquitin thiolesterase/ ubi> AT5G06600 (UBP12)
            transcript variant AT5G06600.2 mRNA, complete cds
          Length = 3897

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 379  catcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaagatttt 437
            ||||| ||||| ||||| |||||||| || || || |||||||| || |||||||||||
Sbjct: 2935 catccagatgcagaactgagattgctcgaggtgttttaccacaagatctacaagatttt 2993
to top
>gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC F26K24 genomic sequence,
             complete sequence
          Length = 100835

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 457   gaaaacatcaacgatcagtactggacactacgtgcagaggagg 499
             ||||||||||| || |||||||||||  |||| ||||||||||
Sbjct: 63483 gaaaacatcaatgaccagtactggactttacgagcagaggagg 63441
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>gb|AY142616.1| Arabidopsis thaliana putative ubiquitin-specific protease UBP12
            (At5g06600) mRNA, complete cds
          Length = 3379

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 379  catcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaagatttt 437
            ||||| ||||| ||||| |||||||| || || || |||||||| || |||||||||||
Sbjct: 2824 catccagatgcagaactgagattgctcgaggtgttttaccacaagatctacaagatttt 2882
to top
>gb|AF360198.1| Arabidopsis thaliana putative ubiquitin-specific protease UBP12
            (At5g06600) mRNA, complete cds
          Length = 3890

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 379  catcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaagatttt 437
            ||||| ||||| ||||| |||||||| || || || |||||||| || |||||||||||
Sbjct: 2935 catccagatgcagaactgagattgctcgaggtgttttaccacaagatctacaagatttt 2993
to top
>gb|AF302663.1|AF302663 Arabidopsis thaliana ubiquitin-specific protease 12 (UBP12) mRNA,
            complete cds
          Length = 3427

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 379  catcctgatgctgaacttagattgcttgaagtattctaccacaaaatatacaagatttt 437
            ||||| ||||| ||||| |||||||| || || || |||||||| || |||||||||||
Sbjct: 2863 catccagatgcagaactgagattgctcgaggtgttttaccacaagatctacaagatttt 2921
to top
>ref|NM_112024.3| Arabidopsis thaliana cysteine-type endopeptidase/ double-stranded DNA
            binding / ubiquitin thiolesterase/ ubiquitin-specific
            protease AT3G11910 mRNA, complete cds
          Length = 3813

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 457  gaaaacatcaacgatcagtactggacactacgtgcagaggag 498
            ||||||||||| || |||||||||||  |||| |||||||||
Sbjct: 2997 gaaaacatcaatgaccagtactggactttacgagcagaggag 3038
to top
>gb|AC122252.4| Mus musculus BAC clone RP23-170E7 from chromosome 17, complete sequence
          Length = 219695

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 442    cccactgaaaagatagaaaaca 463
              ||||||||||||||||||||||
Sbjct: 100183 cccactgaaaagatagaaaaca 100162
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>gb|AC123675.7| Mus musculus chromosome 15, clone RP23-271I6, complete sequence
          Length = 233422

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 228    aaagctttgtagtatattgagt 249
              ||||||||||||||||||||||
Sbjct: 143883 aaagctttgtagtatattgagt 143904
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>gb|AC069564.34| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435n13, complete
             sequence
          Length = 185784

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 442   cccactgaaaagatagaaaaca 463
             ||||||||||||||||||||||
Sbjct: 19686 cccactgaaaagatagaaaaca 19707
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>emb|AL583783.6| Human DNA sequence from clone RP11-75N6 on chromosome 13 Contains a
             novel gene and a pseudogene similar to part of heat shock
             70kDa protein 8 (HSPA8), complete sequence
          Length = 85606

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 119   ttcttttattcagttttattga 140
             ||||||||||||||||||||||
Sbjct: 76816 ttcttttattcagttttattga 76795
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>gb|AY064010.1| Arabidopsis thaliana At3g11910 mRNA sequence
          Length = 4231

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 457  gaaaacatcaacgatcagtactggacactacgtgcagaggag 498
            ||||||||||| || |||||||||||  |||| |||||||||
Sbjct: 3489 gaaaacatcaatgaccagtactggactttacgagcagaggag 3530
to top
>gb|AC002470.17| Homo sapiens Chromosome 22q11.2 BAC Clone b135h6 In BCRL2-GGT Region,
              complete sequence
          Length = 235395

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 526    acagtggaagaggatgagaaga 547
              ||||||||||||||||||||||
Sbjct: 161371 acagtggaagaggatgagaaga 161392
to top
>gb|BT002760.1| Arabidopsis thaliana clone C105177 putative ubiquitin
            carboxyl-terminal hydrolase (At3g11910) mRNA, complete
            cds
          Length = 3379

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 457  gaaaacatcaacgatcagtactggacactacgtgcagaggag 498
            ||||||||||| || |||||||||||  |||| |||||||||
Sbjct: 2902 gaaaacatcaatgaccagtactggactttacgagcagaggag 2943
to top
>gb|AY111375.1| Zea mays CL38709_1 mRNA sequence
          Length = 1037

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 470  atcagtactggacactacgtgcagaggagg 499
            |||||||||||||||| ||||| |||||||
Sbjct: 1037 atcagtactggacactgcgtgcggaggagg 1008
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>gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosome 1, complete sequence
          Length = 221754

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   cagttttattgatatactaca 149
             |||||||||||||||||||||
Sbjct: 24020 cagttttattgatatactaca 24000
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>gb|AC125403.4| Mus musculus BAC clone RP23-4E15 from 1, complete sequence
          Length = 126790

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 129    cagttttattgatatactaca 149
              |||||||||||||||||||||
Sbjct: 116814 cagttttattgatatactaca 116794
to top
>emb|AL022400.8|HS809F4 Human DNA sequence from clone RP4-809F4 on chromosome 1q23.1-24.3
             Contains part of the gene for expressed in hematopoietic
             cells (heart, liver) (HLL), a novel pseudogene and a CpG
             island, complete sequence
          Length = 148335

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 73    tattatgtttatggcaatcat 93
             |||||||||||||||||||||
Sbjct: 86281 tattatgtttatggcaatcat 86261
to top
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 447     tgaaaagatagaaaacatcaa 467
               |||||||||||||||||||||
Sbjct: 2024351 tgaaaagatagaaaacatcaa 2024331



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 447     tgaaaagatagaaaacatcaa 467
               |||||||||||||||||||||
Sbjct: 1740602 tgaaaagatagaaaacatcaa 1740582



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 447     tgaaaagatagaaaacatcaa 467
               |||||||||||||||||||||
Sbjct: 1696014 tgaaaagatagaaaacatcaa 1696034



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 447     tgaaaagatagaaaacatcaa 467
               |||||||||||||||||||||
Sbjct: 1508860 tgaaaagatagaaaacatcaa 1508840



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 447    tgaaaagatagaaaacatcaa 467
              |||||||||||||||||||||
Sbjct: 542597 tgaaaagatagaaaacatcaa 542577
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>gb|AC138664.17| Mus musculus chromosome 3, clone RP24-289J19, complete sequence
          Length = 151691

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    atagtccttatctattatgtt 81
             |||||||||||||||||||||
Sbjct: 77259 atagtccttatctattatgtt 77279
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>gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, complete sequence
          Length = 195108

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 404    ttgaagtattctaccacaaaatata 428
              |||||||||| ||||||||||||||
Sbjct: 155251 ttgaagtattttaccacaaaatata 155275
to top
>dbj|BS000189.1| Pan troglodytes chromosome 22 clone:PTB-016G16, map 22, partial
             sequences, complete sequence
          Length = 57494

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   atggtcactgagagcccagga 184
             |||||||||||||||||||||
Sbjct: 16845 atggtcactgagagcccagga 16825
to top
>emb|AL929208.9| Zebrafish DNA sequence from clone DKEY-56P7 in linkage group 7, complete
              sequence
          Length = 189608

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 110    ttataatccttcttttattca 130
              |||||||||||||||||||||
Sbjct: 137095 ttataatccttcttttattca 137075
to top
>gb|AC133166.2| Mus musculus BAC clone RP24-186D13 from 1, complete sequence
          Length = 158206

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   cagttttattgatatactaca 149
             |||||||||||||||||||||
Sbjct: 99740 cagttttattgatatactaca 99720
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>gb|AC100734.4| Mus musculus chromosome 15, clone RP24-316L11, complete sequence
          Length = 182088

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 113    taatccttcttttattcagtttta 136
              ||||||||||||||| ||||||||
Sbjct: 148753 taatccttcttttatgcagtttta 148730
to top
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08
             map S15179S, complete sequence
          Length = 166005

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   cttgaagtattctaccacaa 422
             ||||||||||||||||||||
Sbjct: 13734 cttgaagtattctaccacaa 13715
to top
>gb|AC145615.3| Homo sapiens BAC clone RP11-1217H2 from UL, complete sequence
          Length = 207889

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 526    acagtggaagaggatgagaa 545
              ||||||||||||||||||||
Sbjct: 169424 acagtggaagaggatgagaa 169405
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 403      cttgaagtattctaccacaa 422
                ||||||||||||||||||||
Sbjct: 35615956 cttgaagtattctaccacaa 35615937
to top
>gb|AC109269.17| Mus musculus chromosome 1, clone RP23-325F17, complete sequence
          Length = 219191

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    aatagtggtccccataaagc 232
              ||||||||||||||||||||
Sbjct: 193373 aatagtggtccccataaagc 193354
to top
>gb|AC125527.3| Mus musculus BAC clone RP24-550H17 from chromosome 1, complete sequence
          Length = 153191

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   tgtcatatgaaagtcattgt 359
             ||||||||||||||||||||
Sbjct: 54450 tgtcatatgaaagtcattgt 54469
to top
>gb|AC126682.3| Mus musculus BAC clone RP23-8E3 from 15, complete sequence
          Length = 221352

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 272    ttttaccaggtgtttgttcacagt 295
              |||||||||||||||| |||||||
Sbjct: 218504 ttttaccaggtgtttggtcacagt 218527
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>gb|AC153656.4| Mus musculus BAC clone RP23-428O19 from chromosome 1, complete sequence
          Length = 196584

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    tgtcatatgaaagtcattgt 359
              ||||||||||||||||||||
Sbjct: 166299 tgtcatatgaaagtcattgt 166318
to top
>gb|AC005526.20| Mus musculus strain 129S6/SvEvTac clone rp21-455d14 map 15, complete
             sequence
          Length = 88442

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 272   ttttaccaggtgtttgttcacagt 295
             |||||||||||||||| |||||||
Sbjct: 78728 ttttaccaggtgtttggtcacagt 78705
to top
>gb|AC121236.18| Medicago truncatula clone mth2-12m19, complete sequence
          Length = 124839

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   atcctgatgctgaacttaga 399
             ||||||||||||||||||||
Sbjct: 52500 atcctgatgctgaacttaga 52481
to top
>gb|AC151964.12| Medicago truncatula clone mth2-47g17, complete sequence
          Length = 117929

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   atcctgatgctgaacttaga 399
             ||||||||||||||||||||
Sbjct: 15566 atcctgatgctgaacttaga 15547
to top
>emb|AL358453.8| Human DNA sequence from clone RP11-115M14 on chromosome 1 Contains a
             cytochrome c oxidase subunit VIa polypeptide 1 (COX6A1)
             pseudogene, complete sequence
          Length = 108934

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   tataatccttcttttattca 130
             ||||||||||||||||||||
Sbjct: 43407 tataatccttcttttattca 43388
to top
>emb|AL161902.12| Human DNA sequence from clone RP11-66B8 on chromosome 13 Contains part
             of the NBEA gene for neurobeachin (BCL8B FLJ10197
             KIAA1544) and a novel gene, complete sequence
          Length = 105537

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   cactgaaaagatagaaaaca 463
             ||||||||||||||||||||
Sbjct: 67433 cactgaaaagatagaaaaca 67414
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>emb|AL135932.7| Human DNA sequence from clone RP4-535H23 on chromosome 11p12-14.1
             Contains STSs, complete sequence
          Length = 143321

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 437   ttgcacccactgaaaagatagaaa 460
             |||||||||||||||||| |||||
Sbjct: 98420 ttgcacccactgaaaagacagaaa 98397
to top
>gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, complete sequence
          Length = 186890

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   acagtggaagaggatgagaa 545
             ||||||||||||||||||||
Sbjct: 75948 acagtggaagaggatgagaa 75929
to top
>emb|BX537110.7| Zebrafish DNA sequence from clone CH211-205J18 in linkage group 6,
              complete sequence
          Length = 166351

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    tccttcttttattcagtttt 135
              ||||||||||||||||||||
Sbjct: 149651 tccttcttttattcagtttt 149670
to top
>emb|CR381654.7| Zebrafish DNA sequence from clone DKEY-30K9 in linkage group 5,
             complete sequence
          Length = 75485

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   ttttattcagttttattgat 141
             ||||||||||||||||||||
Sbjct: 42093 ttttattcagttttattgat 42112
to top
>gb|AC161347.2| Mus musculus chromosome 15, clone RP23-273M5, complete sequence
          Length = 191833

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 113   taatccttcttttattcagtttta 136
             ||||||||||||||| ||||||||
Sbjct: 73612 taatccttcttttatgcagtttta 73635
to top
>emb|BX510918.13| Zebrafish DNA sequence from clone CH211-249O9 in linkage group 5,
              complete sequence
          Length = 199447

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    ttttattcagttttattgat 141
              ||||||||||||||||||||
Sbjct: 111420 ttttattcagttttattgat 111401
to top
>gb|AC112778.7| Homo sapiens X BAC RP11-629O4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 83295

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   agtggcatattgtacagtgg 532
             ||||||||||||||||||||
Sbjct: 15057 agtggcatattgtacagtgg 15076
to top
>gb|AC112919.5| Homo sapiens X BAC RP11-294J19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 82410

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   agtggcatattgtacagtgg 532
             ||||||||||||||||||||
Sbjct: 74132 agtggcatattgtacagtgg 74151
to top
>gb|AC182397.3| Pan troglodytes BAC clone CH251-345O12 from chromosome 16, complete
              sequence
          Length = 158303

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 526    acagtggaagaggatgagaa 545
              ||||||||||||||||||||
Sbjct: 118817 acagtggaagaggatgagaa 118798
to top
>gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 168652

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cttcttttattcagttttat 137
             ||||||||||||||||||||
Sbjct: 61145 cttcttttattcagttttat 61164
to top
>gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0072A12,
              complete sequence
          Length = 149347

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    ccttcttttattcagtttta 136
              ||||||||||||||||||||
Sbjct: 112248 ccttcttttattcagtttta 112267
to top
>gb|AC013284.9| Homo sapiens chromosome 10 clone RP11-13E1, complete sequence
          Length = 154259

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   ttattcagttttattgatat 143
             ||||||||||||||||||||
Sbjct: 14599 ttattcagttttattgatat 14618
to top
>gb|AC092342.3| Homo sapiens chromosome 16 clone RP11-264M14, complete sequence
          Length = 170324

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 526    acagtggaagaggatgagaa 545
              ||||||||||||||||||||
Sbjct: 166319 acagtggaagaggatgagaa 166300
to top
>gb|AC068933.11| Homo sapiens chromosome 8, clone RP11-760J15, complete sequence
          Length = 183437

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 513    agtggcatattgtacagtgg 532
              ||||||||||||||||||||
Sbjct: 156484 agtggcatattgtacagtgg 156503
to top
>gb|AC007028.3| Homo sapiens chromosome 16 clone RP5-835P2, complete sequence
          Length = 148807

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 526    acagtggaagaggatgagaa 545
              ||||||||||||||||||||
Sbjct: 133153 acagtggaagaggatgagaa 133172
to top
>gb|AC026739.7| Homo sapiens chromosome 5 clone CTD-2580L4, complete sequence
          Length = 186308

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    ttattcagttttattgatat 143
              ||||||||||||||||||||
Sbjct: 144509 ttattcagttttattgatat 144490
to top
>gb|AC069282.6| Homo sapiens BAC clone RP11-61L9 from 7, complete sequence
          Length = 175938

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   tccttcttttattcagtttt 135
             ||||||||||||||||||||
Sbjct: 17918 tccttcttttattcagtttt 17899
to top
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0060A14, from chromosome 10, complete sequence
          Length = 151343

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    ccttcttttattcagtttta 136
              ||||||||||||||||||||
Sbjct: 125942 ccttcttttattcagtttta 125961
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 117      ccttcttttattcagtttta 136
                ||||||||||||||||||||
Sbjct: 14639786 ccttcttttattcagtttta 14639805



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 117      ccttcttttattcagtttta 136
                ||||||||||||||||||||
Sbjct: 13433565 ccttcttttattcagtttta 13433584
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 403      cttgaagtattctaccacaa 422
                ||||||||||||||||||||
Sbjct: 35706029 cttgaagtattctaccacaa 35706010
to top
>gb|AC027657.2|AC027657 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040H08,
             complete sequence
          Length = 125679

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   ccttcttttattcagtttta 136
             ||||||||||||||||||||
Sbjct: 18235 ccttcttttattcagtttta 18254
to top
>gb|AC108019.3| Homo sapiens BAC clone RP11-5K16 from 4, complete sequence
          Length = 136867

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   acaaaatatacaagattttt 438
             ||||||||||||||||||||
Sbjct: 28711 acaaaatatacaagattttt 28730
to top
>gb|AC096731.3| Homo sapiens BAC clone RP11-72C15 from 4, complete sequence
          Length = 91203

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   aatccttcttttattcagtt 133
             ||||||||||||||||||||
Sbjct: 62962 aatccttcttttattcagtt 62981
to top
>gb|AC141248.2| Homo sapiens chromosome 16 clone RP11-1251B5, complete sequence
          Length = 173206

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   acagtggaagaggatgagaa 545
             ||||||||||||||||||||
Sbjct: 15651 acagtggaagaggatgagaa 15632
to top
>gb|AC120381.13| Mus musculus chromosome 5, clone RP24-266G11, complete sequence
          Length = 166871

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 404    ttgaagtattctaccacaaaatat 427
              |||||||||| |||||||||||||
Sbjct: 111363 ttgaagtattttaccacaaaatat 111386
to top
>gb|AC158158.6| Mus musculus chromosome 1, clone RP23-10D8, complete sequence
          Length = 193479

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 284  tttgttcacagtataagatt 303
            ||||||||||||||||||||
Sbjct: 8701 tttgttcacagtataagatt 8720
to top
>gb|AC140890.2| Homo sapiens chromosome 16 clone RP11-188D24, complete sequence
          Length = 172153

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 526    acagtggaagaggatgagaa 545
              ||||||||||||||||||||
Sbjct: 120702 acagtggaagaggatgagaa 120683
to top
>gb|AC013272.5| Homo sapiens BAC clone RP11-401C13 from 2, complete sequence
          Length = 172705

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 526    acagtggaagaggatgagaa 545
              ||||||||||||||||||||
Sbjct: 153212 acagtggaagaggatgagaa 153231



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 526    acagtggaagaggatgagaa 545
              ||||||||||||||||||||
Sbjct: 147175 acagtggaagaggatgagaa 147194
to top
>gb|AC018892.8| Homo sapiens BAC clone RP11-499E14 from 2, complete sequence
          Length = 191055

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 526    acagtggaagaggatgagaa 545
              ||||||||||||||||||||
Sbjct: 128386 acagtggaagaggatgagaa 128405



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 526    acagtggaagaggatgagaa 545
              ||||||||||||||||||||
Sbjct: 122379 acagtggaagaggatgagaa 122398
to top
>gb|AC004902.2|AC004902 Homo sapiens PAC clone RP5-823F17 from 7q36, complete sequence
          Length = 104154

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   acagtggaagaggatgagaa 545
             ||||||||||||||||||||
Sbjct: 69632 acagtggaagaggatgagaa 69651
to top
>gb|AC160020.1| Homo sapiens BAC clone RP11-540L21 from 2, complete sequence
          Length = 202084

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   acagtggaagaggatgagaa 545
             ||||||||||||||||||||
Sbjct: 71857 acagtggaagaggatgagaa 71876



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   acagtggaagaggatgagaa 545
             ||||||||||||||||||||
Sbjct: 65849 acagtggaagaggatgagaa 65868
to top
>gb|AC013734.4|AC013734 Homo sapiens BAC clone RP11-557B9 from Y, complete sequence
          Length = 180019

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   acagtggaagaggatgagaa 545
             ||||||||||||||||||||
Sbjct: 91108 acagtggaagaggatgagaa 91127
to top
>gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-340A17, complete
             sequence
          Length = 228371

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ggtcactgagagcccaggag 185
             ||||||||||||||||||||
Sbjct: 35967 ggtcactgagagcccaggag 35986
to top
>gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, complete sequence
          Length = 193708

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   acagtggaagaggatgagaa 545
             ||||||||||||||||||||
Sbjct: 86548 acagtggaagaggatgagaa 86529
to top
>gb|AC136877.2| Homo sapiens chromosome 16 clone RP11-1258I11, complete sequence
          Length = 180454

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 526    acagtggaagaggatgagaa 545
              ||||||||||||||||||||
Sbjct: 174532 acagtggaagaggatgagaa 174513
to top
>gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 74316

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   ttattcagttttattgatat 143
             ||||||||||||||||||||
Sbjct: 53048 ttattcagttttattgatat 53029
to top
>emb|BX276128.8| Zebrafish DNA sequence from clone CH211-215C18 in linkage group 5,
             complete sequence
          Length = 176461

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   ttttattcagttttattgat 141
             ||||||||||||||||||||
Sbjct: 62385 ttttattcagttttattgat 62404
to top
>dbj|BS000085.1| Pan troglodytes chromosome 22 clone:RP43-164H01, map 22, complete
             sequences
          Length = 171357

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    atggcaatcatgatgtttcc 102
             ||||||||||||||||||||
Sbjct: 78407 atggcaatcatgatgtttcc 78426
to top
>gb|AC114594.15| Mus musculus chromosome 1, clone RP23-81J19, complete sequence
          Length = 144466

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   tttgttcacagtataagatt 303
             ||||||||||||||||||||
Sbjct: 78753 tttgttcacagtataagatt 78734
to top
>emb|AL136018.4|CNS01DVS Human chromosome 14 DNA sequence BAC R-104E19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173415

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    gctttgtagtatattgagtt 250
              ||||||||||||||||||||
Sbjct: 112806 gctttgtagtatattgagtt 112787
to top
>gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70 of 83 of the complete
              sequence
          Length = 234263

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    cttcttttattcagttttat 137
              ||||||||||||||||||||
Sbjct: 213734 cttcttttattcagttttat 213753
to top
>dbj|AP001686.1| Homo sapiens genomic DNA, chromosome 21q, section 30/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     atggcaatcatgatgtttcc 102
              ||||||||||||||||||||
Sbjct: 159186 atggcaatcatgatgtttcc 159205
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 117      ccttcttttattcagtttta 136
                ||||||||||||||||||||
Sbjct: 14648027 ccttcttttattcagtttta 14648046



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 117      ccttcttttattcagtttta 136
                ||||||||||||||||||||
Sbjct: 13440906 ccttcttttattcagtttta 13440925
to top
>gb|AC126049.3| Mus musculus BAC clone RP23-224I16 from 1, complete sequence
          Length = 224972

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    aatagtggtccccataaagc 232
              ||||||||||||||||||||
Sbjct: 195164 aatagtggtccccataaagc 195183
to top
>gb|AC147041.3| Mus musculus BAC clone RP23-129J8 from 15, complete sequence
          Length = 190287

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 272   ttttaccaggtgtttgttcacagt 295
             |||||||||||||||| |||||||
Sbjct: 38014 ttttaccaggtgtttggtcacagt 38037
to top
>dbj|AP001116.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B677J23,
             LL56-APP region, complete sequence
          Length = 93290

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    atggcaatcatgatgtttcc 102
             ||||||||||||||||||||
Sbjct: 17228 atggcaatcatgatgtttcc 17247


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,911,816
Number of Sequences: 3902068
Number of extensions: 5911816
Number of successful extensions: 120056
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119535
Number of HSP's gapped (non-prelim): 520
length of query: 550
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 527
effective length of database: 17,143,297,704
effective search space: 9034517890008
effective search space used: 9034517890008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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