ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25i23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY224444.1| Oryza sativa (japonica cultivar-group) isolate 22944 elongation factor 1 gamma-like protein mRNA, partial cds Length = 1242 Score = 266 bits (134), Expect = 5e-68 Identities = 266/310 (85%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttgag 62 |||||||||||||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 37 aaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaagaattttgag 96 Query: 63 atgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtccct 122 |||||||| |||||||| |||||||| || |||||||||| |||||||||||| | ||| Sbjct: 97 atgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttgggaagattcct 156 Query: 123 gttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttgct 182 ||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||| Sbjct: 157 gttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatgttgct 216 Query: 183 cgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgcacgtgttgag 242 |||| |||| ||| | ||||| ||| ||||||||| || ||| | | |||| Sbjct: 217 cgcttgaaggacaacagctctctttgtggttcttctcttatcgactattctcacattgaa 276 Query: 243 caatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgtaccca 302 ||||||||||||||| | || |||||||||||| ||||||| | |||||||||||||||| Sbjct: 277 caatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgtaccca 336 Query: 303 aggcttggtt 312 |||||||||| Sbjct: 337 aggcttggtt 346 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 413 tgaacacacaccttgcttcaaacacataccttgttgggcattc 455
>dbj|AK104931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-G02, full insert sequence Length = 1519 Score = 266 bits (134), Expect = 5e-68 Identities = 266/310 (85%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttgag 62 |||||||||||||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 165 aaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaagaattttgag 224 Query: 63 atgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtccct 122 |||||||| |||||||| |||||||| || |||||||||| |||||||||||| | ||| Sbjct: 225 atgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttgggaagattcct 284 Query: 123 gttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttgct 182 ||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||| Sbjct: 285 gttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatgttgct 344 Query: 183 cgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgcacgtgttgag 242 |||| |||| ||| | ||||| ||| ||||||||| || ||| | | |||| Sbjct: 345 cgcttgaaggacaacagctctctttgtggttcttctcttatcgactattctcacattgaa 404 Query: 243 caatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgtaccca 302 ||||||||||||||| | || |||||||||||| ||||||| | |||||||||||||||| Sbjct: 405 caatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgtaccca 464 Query: 303 aggcttggtt 312 |||||||||| Sbjct: 465 aggcttggtt 474 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 541 tgaacacacaccttgcttcaaacacataccttgttgggcattc 583
>dbj|AK103928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D10, full insert sequence Length = 1529 Score = 266 bits (134), Expect = 5e-68 Identities = 266/310 (85%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttgag 62 |||||||||||||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 155 aaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaagaattttgag 214 Query: 63 atgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtccct 122 |||||||| |||||||| |||||||| || |||||||||| |||||||||||| | ||| Sbjct: 215 atgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttgggaagattcct 274 Query: 123 gttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttgct 182 ||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||| Sbjct: 275 gttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatgttgct 334 Query: 183 cgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgcacgtgttgag 242 |||| |||| ||| | ||||| ||| ||||||||| || ||| | | |||| Sbjct: 335 cgcttgaaggacaacagctctctttgtggttcttctcttatcgactattctcacattgaa 394 Query: 243 caatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgtaccca 302 ||||||||||||||| | || |||||||||||| ||||||| | |||||||||||||||| Sbjct: 395 caatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgtaccca 454 Query: 303 aggcttggtt 312 |||||||||| Sbjct: 455 aggcttggtt 464 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 531 tgaacacacaccttgcttcaaacacataccttgttgggcattc 573
>dbj|AK101977.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076P04, full insert sequence Length = 1721 Score = 266 bits (134), Expect = 5e-68 Identities = 266/310 (85%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttgag 62 |||||||||||||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 395 aaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaagaattttgag 454 Query: 63 atgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtccct 122 |||||||| |||||||| |||||||| || |||||||||| |||||||||||| | ||| Sbjct: 455 atgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttgggaagattcct 514 Query: 123 gttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttgct 182 ||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||| Sbjct: 515 gttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatgttgct 574 Query: 183 cgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgcacgtgttgag 242 |||| |||| ||| | ||||| ||| ||||||||| || ||| | | |||| Sbjct: 575 cgcttgaaggacaacagctctctttgtggttcttctcttatcgactattctcacattgaa 634 Query: 243 caatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgtaccca 302 ||||||||||||||| | || |||||||||||| ||||||| | |||||||||||||||| Sbjct: 635 caatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgtaccca 694 Query: 303 aggcttggtt 312 |||||||||| Sbjct: 695 aggcttggtt 704 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 771 tgaacacacaccttgcttcaaacacataccttgttgggcattc 813
>dbj|AK068226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D22, full insert sequence Length = 1593 Score = 266 bits (134), Expect = 5e-68 Identities = 266/310 (85%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttgag 62 |||||||||||||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 221 aaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaagaattttgag 280 Query: 63 atgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtccct 122 |||||||| |||||||| |||||||| || |||||||||| |||||||||||| | ||| Sbjct: 281 atgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttgggaagattcct 340 Query: 123 gttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttgct 182 ||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||| Sbjct: 341 gttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatgttgct 400 Query: 183 cgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgcacgtgttgag 242 |||| |||| ||| | ||||| ||| ||||||||| || ||| | | |||| Sbjct: 401 cgcttgaaggacaacagctctctttgtggttcttctcttatcgactattctcacattgaa 460 Query: 243 caatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgtaccca 302 ||||||||||||||| | || |||||||||||| ||||||| | |||||||||||||||| Sbjct: 461 caatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgtaccca 520 Query: 303 aggcttggtt 312 |||||||||| Sbjct: 521 aggcttggtt 530 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 597 tgaacacacaccttgcttcaaacacataccttgttgggcattc 639
>gb|BT016270.1| Zea mays clone Contig103 mRNA sequence Length = 1680 Score = 224 bits (113), Expect = 2e-55 Identities = 236/277 (85%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||||||||||||||| ||| ||||||||||||||||| || ||||| | |||| Sbjct: 211 tcaaggcacttattgctgcagaatacagtggggtcaaggttgagttgaccaaggattttg 270 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| || ||||| |||||||| || | |||||||| |||||||||||||| | Sbjct: 271 agatgggtgtctcgaacaagacccctgagtttctaaagatgaacccccttgggaaggttc 330 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 180 ||||||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||| Sbjct: 331 ctgttctggagactcctgatggccctgtttttgagagtaatgctattgcgcgctatgttg 390 Query: 181 ctcgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgcacgtgttg 240 |||||| |||| |||||||| |||| || ||| | ||||||| | || | |||| Sbjct: 391 ctcgcttgaaggatgacaaccctcttttcgggtcttcccgtattgaacaagcccacgttg 450 Query: 241 agcaatggatggacttcgctgccacagaggttgatcc 277 |||| ||||||||||| ||||| ||||| |||||||| Sbjct: 451 agcagtggatggactttgctgcaacagaagttgatcc 487 Score = 46.1 bits (23), Expect = 0.093 Identities = 29/31 (93%) Strand = Plus / Plus Query: 399 aacacattccttgttggacattctgtcactc 429 ||||||| |||||||||||||||||| |||| Sbjct: 609 aacacataccttgttggacattctgttactc 639
>gb|BT016532.1| Zea mays clone Contig365 mRNA sequence Length = 1536 Score = 200 bits (101), Expect = 3e-48 Identities = 233/277 (84%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||| ||||||||||||||||| ||| ||||| ||||||||||| || ||||| | |||| Sbjct: 117 tcaaagcacttattgctgcagaatacagtgggatcaaggttgagttgaccaaggattttg 176 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| || ||||| |||||||| || | |||||||| |||||||||||||| | Sbjct: 177 agatgggtgtctccaacaagacccctgagtttcttaagatgaacccccttgggaaggttc 236 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 180 ||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||||| Sbjct: 237 ctgttctggagactcctgatggccctgtttttgagagtaatgctatcgcacgctatgttg 296 Query: 181 ctcgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgcacgtgttg 240 |||||| |||| |||||||| |||| || ||| | ||||||| | || | |||| Sbjct: 297 ctcgcttgaaggatgacaaccctctttttgggtcttcccgtattgaacaagcccacgttg 356 Query: 241 agcaatggatggacttcgctgccacagaggttgatcc 277 ||||||||||||| || || || ||||| |||||||| Sbjct: 357 agcaatggatggattttgccgcaacagaagttgatcc 393 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactc 429 ||||||||||||| || |||||||||| ||||||||| ||| |||| |||| Sbjct: 495 tgaacacacaccttgcctcaaacacataccttgttgggcatgctgttactc 545
>gb|BT016452.1| Zea mays clone Contig285 mRNA sequence Length = 1562 Score = 200 bits (101), Expect = 3e-48 Identities = 233/277 (84%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||| ||||||||||||||||| ||| ||||| ||||||||||| || ||||| | |||| Sbjct: 124 tcaaagcacttattgctgcagaatacagtgggatcaaggttgagttgaccaaggattttg 183 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| || ||||| |||||||| || | |||||||| |||||||||||||| | Sbjct: 184 agatgggtgtctccaacaagacccctgagtttcttaagatgaacccccttgggaaggttc 243 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 180 ||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||||| Sbjct: 244 ctgttctggagactcctgatggccctgtttttgagagtaatgctatcgcacgctatgttg 303 Query: 181 ctcgctcaaagggtgacaacctgctttggggtggttctcttattgaatatgcacgtgttg 240 |||||| |||| |||||||| |||| || ||| | ||||||| | || | |||| Sbjct: 304 ctcgcttgaaggatgacaaccctctttttgggtcttcccgtattgaacaagcccacgttg 363 Query: 241 agcaatggatggacttcgctgccacagaggttgatcc 277 ||||||||||||| || || || ||||| |||||||| Sbjct: 364 agcaatggatggattttgccgcaacagaagttgatcc 400 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactc 429 ||||||||||||| || |||||||||| ||||||||| ||| |||| |||| Sbjct: 502 tgaacacacaccttgcctcaaacacataccttgttgggcatgctgttactc 552
>ref|XM_464690.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1718 Score = 176 bits (89), Expect = 4e-41 Identities = 173/201 (86%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||| |||||||| ||||||| ||| |||||||||||| || | ||||||||| Sbjct: 170 tcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggcaaagaactttc 229 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| || ||||| || ||||| | ||||||||||||| |||||||||||| Sbjct: 230 agatgggtgtctccaacaagactcctgagtatctcaagatgaatcctattgggaaggtcc 289 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 180 || |||| ||||||||||||||| |||||||||| |||||||| |||||||| |||||| Sbjct: 290 ctattctagagactcctgatggtcctgtttttgaaagcaatgcgattgcacgatatgtta 349 Query: 181 ctcgctcaaagggtgacaacc 201 ||||||| ||| |||||||| Sbjct: 350 ctcgctcgaagtctgacaacc 370 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 aacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 550 aacacacaccttgcatcaaacacataccttgttggccattc 590
>ref|XM_464689.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1708 Score = 176 bits (89), Expect = 4e-41 Identities = 173/201 (86%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||| |||||||| ||||||| ||| |||||||||||| || ||||||||| Sbjct: 158 tcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggtgaagaactttc 217 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| || ||||| || ||||| || ||||||||||||| |||||||| | | Sbjct: 218 agatgggtgtctccaacaagacacctgagtttctcaagatgaatcctattgggaagattc 277 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 180 ||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||| Sbjct: 278 ctgttctagagactcctgatggtcctgtttttgagagcaatgcgattgcacgatatgtta 337 Query: 181 ctcgctcaaagggtgacaacc 201 | ||||| |||| |||||||| Sbjct: 338 cccgctcgaaggctgacaacc 358 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 aacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 538 aacacacaccttgcatcaaacacataccttgttggccattc 578
>dbj|AK061944.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E02, full insert sequence Length = 1723 Score = 176 bits (89), Expect = 4e-41 Identities = 173/201 (86%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||| |||||||| ||||||| ||| |||||||||||| || | ||||||||| Sbjct: 175 tcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggcaaagaactttc 234 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| || ||||| || ||||| | ||||||||||||| |||||||||||| Sbjct: 235 agatgggtgtctccaacaagactcctgagtatctcaagatgaatcctattgggaaggtcc 294 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 180 || |||| ||||||||||||||| |||||||||| |||||||| |||||||| |||||| Sbjct: 295 ctattctagagactcctgatggtcctgtttttgaaagcaatgcgattgcacgatatgtta 354 Query: 181 ctcgctcaaagggtgacaacc 201 ||||||| ||| |||||||| Sbjct: 355 ctcgctcgaagtctgacaacc 375 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 aacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 555 aacacacaccttgcatcaaacacataccttgttggccattc 595
>gb|AY224455.1| Oryza sativa (japonica cultivar-group) isolate 23443 elongation factor 1 gamma-like protein mRNA, partial cds Length = 1230 Score = 176 bits (89), Expect = 4e-41 Identities = 173/201 (86%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||| |||||||| ||||||| ||| |||||||||||| || ||||||||| Sbjct: 17 tcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggtgaagaactttc 76 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| || ||||| || ||||| || ||||||||||||| |||||||| | | Sbjct: 77 agatgggtgtctccaacaagacacctgagtttctcaagatgaatcctattgggaagattc 136 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 180 ||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||| Sbjct: 137 ctgttctagagactcctgatggtcctgtttttgagagcaatgcgattgcacgatatgtta 196 Query: 181 ctcgctcaaagggtgacaacc 201 | ||||| |||| |||||||| Sbjct: 197 cccgctcgaaggctgacaacc 217 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 aacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 397 aacacacaccttgcatcaaacacataccttgttggccattc 437
>dbj|AK104946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F01, full insert sequence Length = 817 Score = 176 bits (89), Expect = 4e-41 Identities = 173/201 (86%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||| |||||||| ||||||| ||| |||||||||||| || | ||||||||| Sbjct: 172 tcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggcaaagaactttc 231 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| || ||||| || ||||| | ||||||||||||| |||||||||||| Sbjct: 232 agatgggtgtctccaacaagactcctgagtatctcaagatgaatcctattgggaaggtcc 291 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 180 || |||| ||||||||||||||| |||||||||| |||||||| |||||||| |||||| Sbjct: 292 ctattctagagactcctgatggtcctgtttttgaaagcaatgcgattgcacgatatgtta 351 Query: 181 ctcgctcaaagggtgacaacc 201 ||||||| ||| |||||||| Sbjct: 352 ctcgctcgaagtctgacaacc 372 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 aacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 552 aacacacaccttgcatcaaacacataccttgttggccattc 592
>dbj|AK103901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150K18, full insert sequence Length = 1708 Score = 176 bits (89), Expect = 4e-41 Identities = 173/201 (86%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||| |||||||| ||||||| ||| |||||||||||| || ||||||||| Sbjct: 158 tcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggtgaagaactttc 217 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| || ||||| || ||||| || ||||||||||||| |||||||| | | Sbjct: 218 agatgggtgtctccaacaagacacctgagtttctcaagatgaatcctattgggaagattc 277 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 180 ||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||| Sbjct: 278 ctgttctagagactcctgatggtcctgtttttgagagcaatgcgattgcacgatatgtta 337 Query: 181 ctcgctcaaagggtgacaacc 201 | ||||| |||| |||||||| Sbjct: 338 cccgctcgaaggctgacaacc 358 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 aacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 538 aacacacaccttgcatcaaacacataccttgttggccattc 578
>dbj|D89802.1| Oryza sativa mRNA for elongation factor 1B gamma, complete cds Length = 1591 Score = 176 bits (89), Expect = 4e-41 Identities = 173/201 (86%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||| |||||||| ||||||| ||| |||||||||||| || | ||||||||| Sbjct: 135 tcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggcaaagaactttc 194 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| || ||||| || ||||| | ||||||||||||| |||||||||||| Sbjct: 195 agatgggtgtctccaacaagactcctgagtatctcaagatgaatcctattgggaaggtcc 254 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 180 || |||| ||||||||||||||| |||||||||| |||||||| |||||||| |||||| Sbjct: 255 ctattctagagactcctgatggtcctgtttttgaaagcaatgcgattgcacgatatgtta 314 Query: 181 ctcgctcaaagggtgacaacc 201 ||||||| ||| |||||||| Sbjct: 315 ctcgctcgaagtctgacaacc 335 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 aacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 515 aacacacaccttgcatcaaacacataccttgttggccattc 555
>gb|BT016763.1| Zea mays clone Contig596 mRNA sequence Length = 1658 Score = 135 bits (68), Expect = 1e-28 Identities = 239/296 (80%) Strand = Plus / Plus Query: 7 cacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttgagatgg 66 |||| ||||| ||||| ||| | || |||||||||||| || ||| ||||| | |||| Sbjct: 140 cactaattgccgcagaatacagcggtgtcaaggttgagttggtgaaggactttcaaatgg 199 Query: 67 gtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtccctgttc 126 |||| || |||||||| || || ||| |||||||||| || |||||||| | ||||| | Sbjct: 200 gtgtctccaacaaaactccagagttcctcaagatgaaccctattgggaagattcctgtcc 259 Query: 127 ttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttgctcgct 186 | ||||||||||||||| ||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 260 tggagactcctgatggtcctgtttttgagagcaatgcaattgcaagatatgttactcgct 319 Query: 187 caaagggtgacaacctgctttggggtggttctcttattgaatatgcacgtgttgagcaat 246 |||| ||| |||| |||| || ||| || ||||| ||||| | | ||||||||| Sbjct: 320 tgaaggctgataacccactttatggatcttcactgattgattatgcccatattgagcaat 379 Query: 247 ggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgtaccca 302 |||| ||||| ||||| |||||||||||| | || || | || ||||||||||||| Sbjct: 380 ggattgactttgctgcaacagaggttgatgcaaacattggaaagtggttgtaccca 435 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 396 tcaaacacattccttgttggacattc 421 |||||||||||||||||||| ||||| Sbjct: 529 tcaaacacattccttgttgggcattc 554
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 3 aaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttgag 62 |||||||||||||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 21790604 aaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaagaattttgag 21790545 Query: 63 atgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggt 118 |||||||| |||||||| |||||||| || |||||||||| |||||||||||||| Sbjct: 21790544 atgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttgggaaggt 21790489 Score = 93.7 bits (47), Expect = 4e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 238 ttgagcaatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgt 297 |||| ||||||||||||||| | || |||||||||||| ||||||| | ||||||||||| Sbjct: 21790127 ttgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgt 21790068 Query: 298 acccaaggcttggtt 312 ||||||||||||||| Sbjct: 21790067 acccaaggcttggtt 21790053 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 120 cctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 177 |||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||| Sbjct: 21790411 cctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatg 21790354 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 21789907 tgaacacacaccttgcttcaaacacataccttgttgggcattc 21789865
>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0610D01 Length = 146418 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 3 aaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttgag 62 |||||||||||||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 48685 aaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaagaattttgag 48626 Query: 63 atgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggt 118 |||||||| |||||||| |||||||| || |||||||||| |||||||||||||| Sbjct: 48625 atgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttgggaaggt 48570 Score = 93.7 bits (47), Expect = 4e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 238 ttgagcaatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgt 297 |||| ||||||||||||||| | || |||||||||||| ||||||| | ||||||||||| Sbjct: 48208 ttgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgt 48149 Query: 298 acccaaggcttggtt 312 ||||||||||||||| Sbjct: 48148 acccaaggcttggtt 48134 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 120 cctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 177 |||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||| Sbjct: 48492 cctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatg 48435 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 47988 tgaacacacaccttgcttcaaacacataccttgttgggcattc 47946
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 135 bits (68), Expect = 1e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 3 aaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttgag 62 |||||||||||||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 13089 aaggcacttattgctgcagagtacactggagtcaaggtcgagctgaccaagaattttgag 13030 Query: 63 atgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggt 118 |||||||| |||||||| |||||||| || |||||||||| |||||||||||||| Sbjct: 13029 atgggtgtctcaaacaagacccctgagtttctcaagatgaacccccttgggaaggt 12974 Score = 93.7 bits (47), Expect = 4e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 238 ttgagcaatggatggacttcgctgccacagaggttgatcccaatatcgcaaggtggttgt 297 |||| ||||||||||||||| | || |||||||||||| ||||||| | ||||||||||| Sbjct: 12612 ttgaacaatggatggacttctcagcaacagaggttgatgccaatattggaaggtggttgt 12553 Query: 298 acccaaggcttggtt 312 ||||||||||||||| Sbjct: 12552 acccaaggcttggtt 12538 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 120 cctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 177 |||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||| Sbjct: 12896 cctgttctggagactcctgaaggtgctgtttttgagagcaatgctatcgcgcgctatg 12839 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 12392 tgaacacacaccttgcttcaaacacataccttgttgggcattc 12350
>gb|DQ222511.1| Solanum tuberosum clone 117C01 unknown mRNA Length = 1472 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 ||||||||||||||||||| || ||||| || | |||||||| || |||| ||||| | Sbjct: 145 agatgggtgtatcaaacaacacacctgagtttcttaagatgaacccaattggaaaggttc 204 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgcta 175 |||| ||||| || |||||||| |||||||||||||||||||||| |||||||| Sbjct: 205 ctgtgcttgaaacacctgatggacctgtttttgagagcaatgctatcgcacgcta 259
>gb|BT013535.1| Lycopersicon esculentum clone 132253F, mRNA sequence Length = 1995 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| |||||||| || ||||| || | |||||||| || |||| ||||| | Sbjct: 669 agatgggtgtgtcaaacaacacacctgagtttcttaagatgaacccgattggaaaggttc 728 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgtt 179 |||| ||||| || |||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 729 ctgtgcttgaaacacctgatggacctgtttttgagagcaatgctatcgcacgctatgtt 787
>gb|DQ241837.1| Solanum tuberosum clone 180F09 putative elongation factor 1-gamma-like mRNA, complete cds Length = 1639 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 ||||||||||||||||||| || ||||| || | ||||||||||| |||| ||||| | Sbjct: 192 agatgggtgtatcaaacaagactcctgagtttcttgagatgaatcccattggaaaggttc 251 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgtt 179 |||| ||| | || ||| |||| ||||||||||||||||||||||||| ||||||||| Sbjct: 252 ctgtgcttcaaacaccttatggacctgtttttgagagcaatgctattgcccgctatgtt 310
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||| |||||||| ||||||| ||| |||||||||||| || | ||||||||| Sbjct: 6722396 tcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggcaaagaactttc 6722455 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggt 118 |||||||||| || ||||| || ||||| | ||||||||||||| |||||||||| Sbjct: 6722456 agatgggtgtctccaacaagactcctgagtatctcaagatgaatcctattgggaaggt 6722513 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||| |||||||| ||||||| ||| |||||||||||| || ||||||||| Sbjct: 6717336 tcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggtgaagaactttc 6717395 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggt 118 |||||||||| || ||||| || ||||| || ||||||||||||| |||||||||| Sbjct: 6717396 agatgggtgtctccaacaagacacctgagtttctcaagatgaatcctattgggaaggt 6717453 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 120 cctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 177 |||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||| Sbjct: 6717526 cctgttctagagactcctgatggtcctgtttttgagagcaatgcgattgcacgatatg 6717583 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 115 aggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgct 174 |||||||| |||| ||||||||||||||| |||||||||| |||||||| |||||||| | Sbjct: 6722580 aggtccctattctagagactcctgatggtcctgtttttgaaagcaatgcgattgcacgat 6722639 Query: 175 atg 177 ||| Sbjct: 6722640 atg 6722642 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 aacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 6723159 aacacacaccttgcatcaaacacataccttgttggccattc 6723199 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 aacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 6718030 aacacacaccttgcatcaaacacataccttgttggccattc 6718070
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||| |||||||| ||||||| ||| |||||||||||| || | ||||||||| Sbjct: 43449 tcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggcaaagaactttc 43508 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggt 118 |||||||||| || ||||| || ||||| | ||||||||||||| |||||||||| Sbjct: 43509 agatgggtgtctccaacaagactcctgagtatctcaagatgaatcctattgggaaggt 43566 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 1 tcaaggcacttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttg 60 |||||||||| |||||||| ||||||| ||| |||||||||||| || ||||||||| Sbjct: 38389 tcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggtgaagaactttc 38448 Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggt 118 |||||||||| || ||||| || ||||| || ||||||||||||| |||||||||| Sbjct: 38449 agatgggtgtctccaacaagacacctgagtttctcaagatgaatcctattgggaaggt 38506 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 120 cctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 177 |||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||| Sbjct: 38579 cctgttctagagactcctgatggtcctgtttttgagagcaatgcgattgcacgatatg 38636 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 115 aggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgct 174 |||||||| |||| ||||||||||||||| |||||||||| |||||||| |||||||| | Sbjct: 43633 aggtccctattctagagactcctgatggtcctgtttttgaaagcaatgcgattgcacgat 43692 Query: 175 atg 177 ||| Sbjct: 43693 atg 43695 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 aacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 44212 aacacacaccttgcatcaaacacataccttgttggccattc 44252 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 381 aacacacacctggcgtcaaacacattccttgttggacattc 421 ||||||||||| || |||||||||| ||||||||| ||||| Sbjct: 39083 aacacacaccttgcatcaaacacataccttgttggccattc 39123
>gb|AY109340.1| Zea mays CL5298_2 mRNA sequence Length = 1863 Score = 77.8 bits (39), Expect = 3e-11 Identities = 163/204 (79%), Gaps = 14/204 (6%) Strand = Plus / Plus Query: 8 acttattgctgcagagtactgtggggtcaaggttgagctgcccaagaactttga------ 61 ||||||||||||||| ||| ||||| ||||||||||| || ||||| | ||||| Sbjct: 164 acttattgctgcagaatacagtgggatcaaggttgagttgaccaaggattttgagatnnn 223 Query: 62 ----gatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaagg 117 ||||||||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct: 224 nnnagatgggtgtctcgaacaagacccctgagtttctaaagatgaannnnnttgggaagg 283 Query: 118 tccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatg 177 | |||||||| |||||||||||||| ||| ||||||||| |||||||| | ||||||| Sbjct: 284 t-cctgttctggagactcctgatggccctg-ttttgagagtaatgctat--cgcgctatg 339 Query: 178 ttgctcgctcaaagggtgacaacc 201 ||||||||| |||| |||||||| Sbjct: 340 ttgctcgcttgaaggatgacaacc 363 Score = 71.9 bits (36), Expect = 2e-09 Identities = 176/218 (80%), Gaps = 6/218 (2%) Strand = Plus / Plus Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 |||||||||| || ||||| |||||||| || | |||||||| |||||||||||| Sbjct: 227 agatgggtgtctcgaacaagacccctgagtttctaaagatgaannnnnttgggaaggtcc 286 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgttg 180 |||||| |||||||||||||| ||||||| ||||| |||||||| || ||||||||| Sbjct: 287 -tgttctggagactcctgatggccctgtttt-gagagtaatgctatcgc--gctatgttg 342 Query: 181 ctcgctcaaagggtgacaacctgct-ttggggtggttctcttattgaatatgcacgtgtt 239 |||||| |||| |||||||| || || |||| ||| | ||||||| | || | ||| Sbjct: 343 ctcgcttgaaggatgacaaccctctgtttgggtc-ttcccgtattgaacaagcccacgtt 401 Query: 240 gagcaatggatggacttcgctgccacagaggttgatcc 277 |||||||||||||| || || || ||||| |||||||| Sbjct: 402 gagcaatggatggattttgccgcaacagaagttgatcc 439 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcactc 429 ||||||||||||| || |||||||||| ||||||||| ||| |||| |||| Sbjct: 541 tgaacacacaccttgcctcaaacacataccttgttgggcatgctgttactc 591
>gb|DQ207868.1| Solanum tuberosum clone 085G10 unknown mRNA Length = 1546 Score = 69.9 bits (35), Expect = 6e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 ||||||||||||||||||| || ||||| || | ||||||||||| |||| ||||| | Sbjct: 176 agatgggtgtatcaaacaagactcctgagtttcttgagatgaatcccattggaaaggttc 235 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctatgtt 179 |||| ||| | || || ||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 236 ctgtgcttcaaacaacttatgaacctgttttggagagcaatgctattgcccgctatgtt 294
>gb|BT013870.1| Lycopersicon esculentum clone 132850R, mRNA sequence Length = 1535 Score = 69.9 bits (35), Expect = 6e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaaggtcc 120 ||||||||||||| ||||| || ||||| || | ||||||||||| |||| ||||| | Sbjct: 199 agatgggtgtatccaacaagacacctgagtttcttgagatgaatcccattggaaaggttc 258 Query: 121 ctgttcttgagactcctgatggtgctgtttttgagagcaatgc 163 |||| ||| | || |||||||| ||||||||||||||||||| Sbjct: 259 ctgtgcttcaaacacctgatggacctgtttttgagagcaatgc 301
>ref|NM_100836.2| Arabidopsis thaliana translation elongation factor AT1G09640 mRNA, complete cds Length = 1758 Score = 63.9 bits (32), Expect = 4e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 55 actttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttggga 114 ||||| |||||||||| | ||||||||||||| ||| |||||||||| || |||| | Sbjct: 237 actttcagatgggtgtcactaacaaaacccctgcgttcctcaagatgaaccctattggaa 296 Query: 115 aggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgct 174 |||| ||||| ||||||||||| || ||| | || ||||| ||||| || ||||| || | Sbjct: 297 aggttcctgtacttgagactcccgagggttcagtatttgaaagcaacgcaattgcccgtt 356 Query: 175 atgt 178 |||| Sbjct: 357 atgt 360
>gb|AY089154.1| Arabidopsis thaliana clone 39525 mRNA, complete sequence Length = 1749 Score = 63.9 bits (32), Expect = 4e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 55 actttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttggga 114 ||||| |||||||||| | ||||||||||||| ||| |||||||||| || |||| | Sbjct: 229 actttcagatgggtgtcactaacaaaacccctgcgttcctcaagatgaaccctattggaa 288 Query: 115 aggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgct 174 |||| ||||| ||||||||||| || ||| | || ||||| ||||| || ||||| || | Sbjct: 289 aggttcctgtacttgagactcccgagggttcagtatttgaaagcaacgcaattgcccgtt 348 Query: 175 atgt 178 |||| Sbjct: 349 atgt 352
>gb|AF475939.1| Glycine max elongation factor 1-gamma mRNA, complete cds Length = 1387 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 57 tttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaatccccttgggaag 116 |||||||||||||| || || ||||| |||||||| ||||||| ||||| |||| ||| Sbjct: 119 tttgagatgggtgtctccaataaaactcctgaatttctcaagatcaatcctattggcaag 178 Query: 117 gtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgcacgctat 176 || ||||| || || || || |||||| | | || ||||||||||| ||||| |||||| Sbjct: 179 gttcctgtgctggaaacccccgatggtccaatattcgagagcaatgccattgctcgctat 238 Query: 177 gtt 179 ||| Sbjct: 239 gtt 241
>ref|NM_001036125.1| Arabidopsis thaliana translation elongation factor AT1G57720 transcript variant AT1G57720.2 mRNA, complete cds Length = 1632 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 96 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 155 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 261 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 320 Query: 156 agcaatgctattgcacgctatgt 178 |||||||| ||||| || ||||| Sbjct: 321 agcaatgccattgcccgatatgt 343 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 544 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 592 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagta 25 ||||||||||||||||||||||| Sbjct: 168 aaggcacttattgctgcagagta 190
>ref|NM_104568.2| Arabidopsis thaliana translation elongation factor AT1G57720 transcript variant AT1G57720.1 mRNA, complete cds Length = 1650 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 96 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 155 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 283 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 342 Query: 156 agcaatgctattgcacgctatgt 178 |||||||| ||||| || ||||| Sbjct: 343 agcaatgccattgcccgatatgt 365 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 566 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 614 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagta 25 ||||||||||||||||||||||| Sbjct: 190 aaggcacttattgctgcagagta 212
>gb|BT000973.1| Arabidopsis thaliana clone C104655 putative elongation factor 1B gamma (At1g57720) mRNA, complete cds Length = 1273 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 96 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 155 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 139 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 198 Query: 156 agcaatgctattgcacgctatgt 178 |||||||| ||||| || ||||| Sbjct: 199 agcaatgccattgcccgatatgt 221 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 422 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 470 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagta 25 ||||||||||||||||||||||| Sbjct: 46 aaggcacttattgctgcagagta 68
>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence Length = 139778 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 61 agatgggtgtatcaaacaaaacccctgaattcatcaagatgaa 103 |||||||||| || |||||||||||| |||||||||| ||||| Sbjct: 43802 agatgggtgtttctaacaaaacccctcaattcatcaacatgaa 43760 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 132 actcctgatggtgctgtttttgagagcaatgctattgcacgctatg 177 |||||||||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 43651 actcctgatggtcctgtctttgagagtaatgccattgctcgctatg 43606
>gb|AY035082.1| Arabidopsis thaliana putative elongation factor 1B gamma (At1g57720) mRNA, complete cds Length = 1524 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 96 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 155 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 242 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 301 Query: 156 agcaatgctattgcacgctatgt 178 |||||||| ||||| || ||||| Sbjct: 302 agcaatgccattgcccgatatgt 324 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 525 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 573 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagta 25 ||||||||||||||||||||||| Sbjct: 149 aaggcacttattgctgcagagta 171
>gb|AY113043.1| Arabidopsis thaliana At1g57720/T8L23_18 mRNA, complete cds Length = 1242 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 96 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 155 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 139 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 198 Query: 156 agcaatgctattgcacgctatgt 178 |||||||| ||||| || ||||| Sbjct: 199 agcaatgccattgcccgatatgt 221 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 422 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 470 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagta 25 ||||||||||||||||||||||| Sbjct: 46 aaggcacttattgctgcagagta 68
>gb|AY064630.1| Arabidopsis thaliana unknown protein (At1g57720; T8L23.18) mRNA, complete cds Length = 1265 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 96 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 155 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 139 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 198 Query: 156 agcaatgctattgcacgctatgt 178 |||||||| ||||| || ||||| Sbjct: 199 agcaatgccattgcccgatatgt 221 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 422 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 470 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagta 25 ||||||||||||||||||||||| Sbjct: 46 aaggcacttattgctgcagagta 68
>gb|AF428347.1|AF428347 Arabidopsis thaliana At1g57720/T8L23_18 mRNA, complete cds Length = 1569 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 96 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 155 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 274 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 333 Query: 156 agcaatgctattgcacgctatgt 178 |||||||| ||||| || ||||| Sbjct: 334 agcaatgccattgcccgatatgt 356 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 557 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 605 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagta 25 ||||||||||||||||||||||| Sbjct: 181 aaggcacttattgctgcagagta 203
>gb|AF424630.1|AF424630 Arabidopsis thaliana At1g57720/T8L23_18 mRNA, complete cds Length = 1606 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 96 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 155 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 240 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 299 Query: 156 agcaatgctattgcacgctatgt 178 |||||||| ||||| || ||||| Sbjct: 300 agcaatgccattgcccgatatgt 322 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 523 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 571 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagta 25 ||||||||||||||||||||||| Sbjct: 147 aaggcacttattgctgcagagta 169
>gb|AF370502.1|AF370502 Arabidopsis thaliana Unknown protein (T8L23.18) mRNA, complete cds Length = 1588 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 96 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 155 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 242 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 301 Query: 156 agcaatgctattgcacgctatgt 178 |||||||| ||||| || ||||| Sbjct: 302 agcaatgccattgcccgatatgt 324 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 525 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 573 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagta 25 ||||||||||||||||||||||| Sbjct: 149 aaggcacttattgctgcagagta 171
>gb|AY085256.1| Arabidopsis thaliana clone 141963 mRNA, complete sequence Length = 1580 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 96 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 155 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 284 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 343 Query: 156 agcaatgctattgcacgctatgt 178 |||||||| ||||| || ||||| Sbjct: 344 agcaatgccattgcccgatatgt 366 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 567 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 615 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagta 25 ||||||||||||||||||||||| Sbjct: 191 aaggcacttattgctgcagagta 213
>gb|AF297712.1|AF297712 Prunus avium translation elongation factor 1-gamma mRNA, complete cds Length = 1526 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 150 tttgagagcaatgctattgcacgctatgttgctcgctcaaagggtgacaa 199 |||||||| ||||| |||||||| ||||||||||||| |||| |||||| Sbjct: 251 tttgagagtaatgccattgcacgttatgttgctcgcttgaaggctgacaa 300
>gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genomic sequence, complete sequence Length = 90448 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 69632 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 69680 Score = 46.1 bits (23), Expect = 0.093 Identities = 47/55 (85%) Strand = Plus / Plus Query: 115 aggtccctgttcttgagactcctgatggtgctgtttttgagagcaatgctattgc 169 |||| ||||| |||||||||||||| ||| | | |||||||||||||| ||||| Sbjct: 69026 aggttcctgtgcttgagactcctgaaggtcccatatttgagagcaatgccattgc 69080 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 aaggcacttattgctgcagagta 25 ||||||||||||||||||||||| Sbjct: 68836 aaggcacttattgctgcagagta 68858
>emb|BX815484.1|CNS0ABHN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS65ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1489 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 379 tgaacacacacctggcgtcaaacacattccttgttggacattctgtcac 427 |||||||||| || || || ||||| |||||||||||||| |||||||| Sbjct: 471 tgaacacacatctcgcctccaacactttccttgttggacactctgtcac 519 Score = 46.1 bits (23), Expect = 0.093 Identities = 68/83 (81%) Strand = Plus / Plus Query: 96 aagatgaatccccttgggaaggtccctgttcttgagactcctgatggtgctgtttttgag 155 |||||||| || |||| ||||| ||||| |||||||||||||| ||| | | |||||| Sbjct: 188 aagatgaaccctattggaaaggttcctgtgcttgagactcctgaaggtcccatatttgag 247 Query: 156 agcaatgctattgcacgctatgt 178 ||| |||| ||||| || ||||| Sbjct: 248 agcgatgccattgcccgatatgt 270 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 aggcacttattgctgcagagta 25 |||||||||||||||||||||| Sbjct: 96 aggcacttattgctgcagagta 117
>dbj|AB246880.1| Lethenteron japonicum EEF1G mRNA for eukaryotic elongation factor 1 gamma, partial cds Length = 1177 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 150 tttgagagcaatgctattgcacgctatgttgc 181 |||||||||||||| ||||||| ||||||||| Sbjct: 202 tttgagagcaatgccattgcacactatgttgc 233
>gb|AY130447.1| Petromyzon marinus eukaryotic translation elongation factor 1 gamma mRNA, partial cds Length = 1087 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 150 tttgagagcaatgctattgcacgctatgttgc 181 |||||||||||||| ||||||| ||||||||| Sbjct: 137 tttgagagcaatgccattgcacactatgttgc 168
>emb|AL136984.20| Human DNA sequence from clone RP11-52A20 on chromosome 1q24.1-24.3 Contains part of the POU2F1 gene for POU domain class 2 transcription factor 1, complete sequence Length = 169627 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 aacaaaacccctgaattcatc 95 ||||||||||||||||||||| Sbjct: 91304 aacaaaacccctgaattcatc 91284
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 55 actttgagatgggtgtatcaaacaaaacccctgaattcatcaagatgaa 103 ||||| |||||||||| | ||||||||||||| ||| |||||||||| Sbjct: 7362 actttcagatgggtgtcactaacaaaacccctgcgttcctcaagatgaa 7410
>ref|XM_855807.1| PREDICTED: Canis familiaris hypothetical protein LOC608321, transcript variant 8 (LOC608322), mRNA Length = 1449 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 1214 tttgagagcaatgctattgc 1195
>ref|XM_855774.1| PREDICTED: Canis familiaris hypothetical protein LOC608321, transcript variant 7 (LOC608322), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 1213 tttgagagcaatgctattgc 1194
>ref|XM_855747.1| PREDICTED: Canis familiaris hypothetical protein LOC608321, transcript variant 6 (LOC608322), mRNA Length = 1415 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 1180 tttgagagcaatgctattgc 1161
>ref|XM_855714.1| PREDICTED: Canis familiaris hypothetical protein LOC608321, transcript variant 5 (LOC608322), mRNA Length = 1274 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 1039 tttgagagcaatgctattgc 1020
>ref|XM_855616.1| PREDICTED: Canis familiaris hypothetical protein LOC608321, transcript variant 2 (LOC608322), mRNA Length = 922 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 687 tttgagagcaatgctattgc 668
>ref|XM_855578.1| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 7 (LOC608307), mRNA Length = 1454 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 242 tttgagagcaatgctattgc 261
>ref|XM_855547.1| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 6 (LOC608307), mRNA Length = 1399 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 236 tttgagagcaatgctattgc 255
>ref|XM_855517.1| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 5 (LOC608307), mRNA Length = 1324 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 236 tttgagagcaatgctattgc 255
>ref|XM_855485.1| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 4 (LOC608307), mRNA Length = 1231 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 236 tttgagagcaatgctattgc 255
>ref|XM_855447.1| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 3 (LOC608307), mRNA Length = 1364 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 236 tttgagagcaatgctattgc 255
>ref|XM_535412.2| PREDICTED: Canis familiaris similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma), transcript variant 1 (LOC608307), mRNA Length = 540 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 236 tttgagagcaatgctattgc 255
>gb|AC121917.2| Mus musculus BAC clone RP24-194F23 from 5, complete sequence Length = 178113 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 12682 tttgagagcaatgctattgc 12701
>gb|AF434671.1| Streptococcus sobrinus su1 gene, partial cds; cell division protein FtsK (ftsK) gene, complete cds; and su2 gene, partial cds Length = 3188 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ttcaatgcccagtctgagga 340 |||||||||||||||||||| Sbjct: 1972 ttcaatgcccagtctgagga 1991
>emb|AL110114.1|HSJ868P24 Human DNA sequence from clone RP5-868P24 on chromosome 20 Contains STSs and GSSs, complete sequence Length = 78371 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 aaggtccctgttcttgagac 133 |||||||||||||||||||| Sbjct: 3451 aaggtccctgttcttgagac 3432
>emb|AL663039.18| Mouse DNA sequence from clone RP23-50H23 on chromosome 11 Contains a novel gene and a CpG island, complete sequence Length = 219899 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 acttgaagcattgaacacac 387 |||||||||||||||||||| Sbjct: 34671 acttgaagcattgaacacac 34652 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 acttgaagcattgaacacac 387 |||||||||||||||||||| Sbjct: 34540 acttgaagcattgaacacac 34521
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gtggggtcaaggttgagctg 47 |||||||||||||||||||| Sbjct: 212671 gtggggtcaaggttgagctg 212652
>gb|AF372841.1| Streptococcus sobrinus FtsK-like protein (ftsK) gene, partial cds Length = 1340 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ttcaatgcccagtctgagga 340 |||||||||||||||||||| Sbjct: 836 ttcaatgcccagtctgagga 855
>gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR37K07, complete sequence Length = 157722 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ctgaggaattcggcattgct 353 |||||||||||||||||||| Sbjct: 75095 ctgaggaattcggcattgct 75114
>emb|BX537133.3| Zebrafish DNA sequence from clone DKEY-90M5 in linkage group 20, complete sequence Length = 249791 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tcaaagggtgacaacctgct 205 |||||||||||||||||||| Sbjct: 165047 tcaaagggtgacaacctgct 165028
>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete sequence Length = 236144 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ctgaggaattcggcattgct 353 |||||||||||||||||||| Sbjct: 82438 ctgaggaattcggcattgct 82457
>gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complete sequence Length = 217530 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tttgagagcaatgctattgc 169 |||||||||||||||||||| Sbjct: 191056 tttgagagcaatgctattgc 191075
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gtggggtcaaggttgagctg 47 |||||||||||||||||||| Sbjct: 1408129 gtggggtcaaggttgagctg 1408148 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,600,078 Number of Sequences: 3902068 Number of extensions: 3600078 Number of successful extensions: 71435 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71199 Number of HSP's gapped (non-prelim): 230 length of query: 429 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 407 effective length of database: 17,147,199,772 effective search space: 6978910307204 effective search space used: 6978910307204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
