ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25g13 |
|---|---|
| Clone Library Name | barley_pub |
>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 832 Score = 155 bits (393), Expect = 6e-38 Identities = 79/160 (49%), Positives = 102/160 (63%) Frame = +1 Query: 7 TRGKGEAWVNGQSIGRYWPTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRS 186 T GKG+ W+NGQSIGRYWP A SG SC+YRG+Y+ KCL CG+ SQ YHVPRS Sbjct: 634 TMGKGQIWINGQSIGRYWPAYKA--SGSCGSCDYRGTYNEKKCLSNCGEASQRWYHVPRS 691 Query: 187 FLQPGSNDIVLFEQFGGNPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPA 366 +L P N +V+ E++GG+P+ IS + SVCA V E P +D+W + P Sbjct: 692 WLIPTGNFLVVLEEWGGDPTGISMVKRSVASVCAEVEELQP-TMDNWRTKAY----GRPK 746 Query: 367 LRLECPKEGQVISSIKFASFGTPSGTCGSYSHGECSSSQA 486 + L C GQ +S IKFASFGTP GTCGS+S G C + ++ Sbjct: 747 VHLSC-DPGQKMSKIKFASFGTPQGTCGSFSEGSCHAHKS 785
>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 828 Score = 142 bits (359), Expect = 5e-34 Identities = 70/158 (44%), Positives = 90/158 (56%), Gaps = 1/158 (0%) Frame = +1 Query: 13 GKGEAWVNGQSIGRYWPTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFL 192 GKGE W+NGQSIGRYWP+ + GC C+YRG Y + KC CG+P+Q YHVPRSFL Sbjct: 648 GKGEVWINGQSIGRYWPSFNSSDEGCTEECDYRGEYGSDKCAFMCGKPTQRWYHVPRSFL 707 Query: 193 -QPGSNDIVLFEQFGGNPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPAL 369 G N I LFE+ GG+PS + F T T VCA E + Sbjct: 708 NDKGHNTITLFEEMGGDPSMVKFKTVVTGRVCAKAHEHN--------------------- 746 Query: 370 RLECPKEGQVISSIKFASFGTPSGTCGSYSHGECSSSQ 483 ++E + IS++KFASFG PSG CGS++ G C ++ Sbjct: 747 KVELSCNNRPISAVKFASFGNPSGQCGSFAAGSCEGAK 784
>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 835 Score = 141 bits (356), Expect = 1e-33 Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 1/161 (0%) Frame = +1 Query: 7 TRGKGEAWVNGQSIGRYWPTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRS 186 T GKG+ W+NGQS+GR+WP SG + CNY G + KCL CG+ SQ YHVPRS Sbjct: 636 TMGKGQVWINGQSLGRHWPAY--KSSGSCSVCNYTGWFDEKKCLTNCGEGSQRWYHVPRS 693 Query: 187 FLQPGSNDIVLFEQFGGNPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRS-GP 363 +L P N +V+FE++GG+P I+ ++ SVCA + E P ++ K R P Sbjct: 694 WLYPTGNLLVVFEEWGGDPYGITLVKREIGSVCADIYEWQPQLLNWQRLVSGKFDRPLRP 753 Query: 364 ALRLECPKEGQVISSIKFASFGTPSGTCGSYSHGECSSSQA 486 L+C GQ ISSIKFASFGTP G CG++ G C + ++ Sbjct: 754 KAHLKC-APGQKISSIKFASFGTPEGVCGNFQQGSCHAPRS 793
>BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.2.1.23)| (Lactase) (SR12 protein) Length = 731 Score = 107 bits (268), Expect = 2e-23 Identities = 48/88 (54%), Positives = 65/88 (73%) Frame = +1 Query: 4 GTRGKGEAWVNGQSIGRYWPTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPR 183 G+ GKG+AW+NGQSIGR+W NIA S C ++CNY G+Y+ TKCL CG+ SQ YHVPR Sbjct: 642 GSMGKGQAWINGQSIGRHWSNNIAKGS-CNDNCNYAGTYTETKCLSDCGKSSQKWYHVPR 700 Query: 184 SFLQPGSNDIVLFEQFGGNPSKISFTTK 267 S+LQP N +V+FE++GG+ +S + Sbjct: 701 SWLQPRGNLLVVFEEWGGDTKWVSLVKR 728
>BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 731 Score = 103 bits (256), Expect = 4e-22 Identities = 45/90 (50%), Positives = 62/90 (68%) Frame = +1 Query: 4 GTRGKGEAWVNGQSIGRYWPTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPR 183 G+ GKG+ W+NGQS+GR+WP IA G C+Y G+Y KC CG+PSQ YH+PR Sbjct: 637 GSMGKGQIWINGQSVGRHWPGYIA--RGSCGDCSYAGTYDDKKCRTHCGEPSQRWYHIPR 694 Query: 184 SFLQPGSNDIVLFEQFGGNPSKISFTTKQT 273 S+L P N +V+FE++GG+PS+IS + T Sbjct: 695 SWLTPTGNLLVVFEEWGGDPSRISLVERGT 724
>BGAL_MOUSE (P23780) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 647 Score = 35.8 bits (81), Expect = 0.084 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +1 Query: 16 KGEAWVNGQSIGRYWPTNIAPQ 81 KG+ W+NG ++GRYWPT + PQ Sbjct: 580 KGQVWINGFNLGRYWPT-MGPQ 600
>BGAL_XANMN (P48982) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 598 Score = 33.9 bits (76), Expect = 0.32 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +1 Query: 13 GKGEAWVNGQSIGRYWPTNIAPQS 84 GKG AW NG ++GR+W NI PQ+ Sbjct: 548 GKGFAWANGVNLGRHW--NIGPQT 569
>BGAL_CANFA (Q9TRY9) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 668 Score = 33.5 bits (75), Expect = 0.42 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 Query: 16 KGEAWVNGQSIGRYWP 63 KG+ W+NG ++GRYWP Sbjct: 579 KGQVWINGFNLGRYWP 594
>BGAL_FELCA (O19015) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 669 Score = 33.5 bits (75), Expect = 0.42 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 Query: 16 KGEAWVNGQSIGRYWP 63 KG+ W+NG ++GRYWP Sbjct: 580 KGQVWINGFNLGRYWP 595
>BGAM_HUMAN (P16279) Beta-galactosidase-related protein precursor| (Beta-galactosidase-like protein) (S-Gal) (Elastin-binding protein) (EBP) Length = 546 Score = 33.5 bits (75), Expect = 0.42 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 Query: 16 KGEAWVNGQSIGRYWP 63 KG+ W+NG ++GRYWP Sbjct: 447 KGQVWINGFNLGRYWP 462
>BGAL_MACFA (Q60HF6) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 682 Score = 33.5 bits (75), Expect = 0.42 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 Query: 16 KGEAWVNGQSIGRYWP 63 KG+ W+NG ++GRYWP Sbjct: 578 KGQVWINGFNLGRYWP 593
>BGAL_HUMAN (P16278) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 677 Score = 33.5 bits (75), Expect = 0.42 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 Query: 16 KGEAWVNGQSIGRYWP 63 KG+ W+NG ++GRYWP Sbjct: 578 KGQVWINGFNLGRYWP 593
>SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Nodulin-100) Length = 805 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Frame = +1 Query: 325 WVSSQQKLQRSGPALRLECPKEGQVISSIKFASFG---TPSGTCGSYSHGECSSSQA 486 W+SSQ R+G R+ C G + + +FG + TCG + C+ A Sbjct: 642 WISSQMNRVRNGELYRVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPA 698
>EMF2_ARATH (Q8L6Y4) Polycomb protein EMBRYONIC FLOWER 2| Length = 631 Score = 31.2 bits (69), Expect = 2.1 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 12/100 (12%) Frame = +1 Query: 118 YSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPSKISFTTKQTESVCAHVS 297 +S CL KC + YH+ P ++D++ FE + + + +TE++ + V+ Sbjct: 324 FSCPFCLVKCASFKGLRYHL------PSTHDLLNFEFWVTEEFQAVNVSLKTETMISKVN 377 Query: 298 ED--HPDQIDSWVS----------SQQKLQRSGPALRLEC 381 ED P Q + S SQ + R GP L L C Sbjct: 378 EDDVDPKQQTFFFSSKKFRRRRQKSQVRSSRQGPHLGLGC 417
>KI2L4_HUMAN (Q99706) Killer cell immunoglobulin-like receptor 2DL4 precursor| (MHC class I NK cell receptor KIR103AS) (Killer cell inhibitory receptor 103AS) (KIR-103AS) (G9P) (CD158d antigen) Length = 377 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = +1 Query: 58 WPTNIAPQSGCVN-SCNYRGSYSATKCLKKCGQPSQILYH 174 WP+ + PQ G V C+YR ++ KK G P LY+ Sbjct: 36 WPSAVVPQGGHVTLRCHYRRGFNIFTLYKKDGVPVPELYN 75
>SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 30.4 bits (67), Expect = 3.5 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = +1 Query: 235 GNPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPALRLECPKEGQVISSIK 414 GNPSK + + + + + + + W+S+Q R+G R C +G + Sbjct: 617 GNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAF 676 Query: 415 FASFG---TPSGTCG 450 + +FG S TCG Sbjct: 677 YEAFGLTVVESMTCG 691
>SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 806 Score = 30.4 bits (67), Expect = 3.5 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Frame = +1 Query: 325 WVSSQQKLQRSGPALRLECPKEGQVISSIKFASFG---TPSGTCGSYSHGECSSSQA 486 W+SSQ R+G R C +G + + +FG + TCG + C A Sbjct: 644 WISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA 700
>RPM1_CAEEL (Q17551) Ubiquitin ligase protein rpm-1 (EC 6.3.2.-)| (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3) Length = 3766 Score = 29.3 bits (64), Expect = 7.9 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +3 Query: 363 STSSGMPQRRSGHQQYQVCKLRDTEW 440 STS+ R SG Q+YQ+C + + W Sbjct: 650 STSTTSSPRHSGRQEYQICPIGEHTW 675
>ISN1_KLULA (Q6CY84) IMP-specific 5'-nucleotidase 1 (EC 3.1.3.-)| Length = 422 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 4/53 (7%) Frame = -2 Query: 338 WEETQLSIWSG*SSDTCAHTLSVCFVVKDILLGLPPNC----SKRTISLLPGW 192 W + + WS D CF LL LP C KR + +PG+ Sbjct: 247 WVPSSVKAWSDDDIDATLDVAQTCFGELSHLLALPSKCQIIRKKRAVGFVPGF 299
>SUS2_MAIZE (P49036) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 29.3 bits (64), Expect = 7.9 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = +1 Query: 235 GNPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPALRLECPKEGQVISSIK 414 GNPSK + + + + + + + W+S+Q R+G R C +G + Sbjct: 617 GNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAF 676 Query: 415 FASFG---TPSGTCG 450 + +FG + TCG Sbjct: 677 YEAFGLTVVEAMTCG 691 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.130 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,441,248 Number of Sequences: 219361 Number of extensions: 1885709 Number of successful extensions: 4496 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4326 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4487 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
