Clone Information

BLAST Search Result

Clone Name	bags25f08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PLAS_HORVU (P08248) Plastocyanin, chloroplast precursor	136	2e-32
2	PLAS_ORYSA (P20423) Plastocyanin, chloroplast precursor	133	2e-31
3	PLAS1_TOBAC (P35476) Plastocyanin A'/A''	101	9e-22
4	PLAS_MERPE (P00295) Plastocyanin	100	2e-21
5	PLAS2_POPNI (P11970) Plastocyanin B, chloroplast precursor	99	3e-21
6	PLAS_VICFA (P00288) Plastocyanin	98	9e-21
7	PLAS_DAUCA (P20422) Plastocyanin	98	9e-21
8	PLAS_LACSA (P00290) Plastocyanin	97	1e-20
9	PLAS_GINBI (P84338) Plastocyanin	97	2e-20
10	PLAS_SOLCR (P00297) Plastocyanin	97	2e-20
11	PLAS_CUCPE (P00292) Plastocyanin	96	3e-20
12	PLAS_PETCR (P17341) Plastocyanins A and B	96	5e-20
13	PLAS2_TOBAC (P35477) Plastocyanin B'/B''	96	5e-20
14	PLAS_SOLTU (P00296) Plastocyanin	95	6e-20
15	PLAS1_POPNI (P00299) Plastocyanin A, chloroplast precursor	95	6e-20
16	PLAS_PHAVU (P00287) Plastocyanin	95	8e-20
17	PLAS_CHLFU (P00300) Plastocyanin	95	8e-20
18	PLAS_SPIOL (P00289) Plastocyanin, chloroplast precursor	95	8e-20
19	PLAS_PEA (P16002) Plastocyanin, chloroplast precursor	95	8e-20
20	PLAS_SILPR (P07030) Plastocyanin, chloroplast precursor	94	1e-19
21	PLAS_CAPBU (P00294) Plastocyanin	94	2e-19
22	PLAS2_ARATH (P42699) Plastocyanin major isoform, chloroplast pre...	94	2e-19
23	PLAS_LYCES (P17340) Plastocyanin, chloroplast precursor	94	2e-19
24	PLAS_SAMNI (P00291) Plastocyanin	93	2e-19
25	PLAS_CHLRE (P18068) Plastocyanin, chloroplast precursor (PC6-2)	93	3e-19
26	PLAS_SCEOB (P26956) Plastocyanin, chloroplast precursor	92	4e-19
27	PLAS_CUCSA (P00293) Plastocyanin	92	7e-19
28	PLAS_RUMOB (P00298) Plastocyanin	91	9e-19
29	PLAS1_ARATH (P11490) Plastocyanin minor isoform, chloroplast pre...	89	6e-18
30	PLAS_FRIAG (O22646) Plastocyanin, chloroplast precursor	88	8e-18
31	PLAS_ULVAR (P13133) Plastocyanin	87	1e-17
32	PLAS_ENTPR (P07465) Plastocyanin	87	2e-17
33	PLAS_ULVPE (P56274) Plastocyanin	87	2e-17
34	PLAS_PHYPA (Q9SXW9) Plastocyanin, chloroplast precursor	84	1e-16
35	PLAS_ANAVT (Q3M9H8) Plastocyanin precursor	56	4e-08
36	PLAS_ANASP (P46444) Plastocyanin precursor	55	5e-08
37	PLAS_ANASO (O52830) Plastocyanin precursor	55	5e-08
38	PLAS_ANAVA (P0C178) Plastocyanin	55	5e-08
39	PLAS_PHOLA (Q51883) Plastocyanin precursor	52	5e-07
40	PLAS_SYNY3 (P21697) Plastocyanin precursor	51	1e-06
41	PLAS_SYNP7 (P55020) Plastocyanin precursor	46	4e-05
42	PLAS_PROHO (P50057) Plastocyanin precursor	44	1e-04
43	PLAS_THAOC (P84800) Plastocyanin (Fragments)	44	1e-04
44	AZUP_ACHCY (P19567) Pseudoazurin precursor (Blue copper protein)	31	1.1
45	PLAS_DRYCA (Q7SIB8) Plastocyanin	31	1.1
46	AMCY_PARDE (P22364) Amicyanin precursor	31	1.4
47	NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleo...	31	1.4
48	AZUP_RHILV (Q52825) Putative pseudoazurin precursor (Blue copper...	30	1.9
49	AZUP_ALCFA (P04377) Pseudoazurin precursor (Cupredoxin) (Blue co...	30	2.4
50	HDC_DROME (Q9N2M8) Headcase protein [Contains: Headcase short pr...	29	4.1
51	AMCY_PARVE (P22365) Amicyanin precursor	29	4.1
52	AMCY_METEX (P04172) Amicyanin-alpha precursor	29	5.4
53	EMS_DROME (P18488) Homeotic protein empty spiracles	28	7.1
54	ZIC2_XENLA (Q91689) Zinc finger protein ZIC 2 (Zinc finger prote...	28	9.2
55	YCJV_ECOLI (P77481) Hypothetical ABC transporter ATP-binding pro...	28	9.2
56	HIRA_HUMAN (P54198) HIRA protein (TUP1-like enhancer of split pr...	28	9.2

>PLAS_HORVU (P08248) Plastocyanin, chloroplast precursor|
          Length = 155

 Score =  136 bits (342), Expect = 2e-32
 Identities = 66/67 (98%), Positives = 66/67 (98%)
 Frame = +3

Query: 228 QDVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEY 407
           QDVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEY
Sbjct: 59  QDVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEY 118

Query: 408 LNAPGET 428
           L APGET
Sbjct: 119 LTAPGET 125

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>PLAS_ORYSA (P20423) Plastocyanin, chloroplast precursor|
          Length = 154

 Score =  133 bits (334), Expect = 2e-31
 Identities = 63/67 (94%), Positives = 67/67 (100%)
 Frame = +3

Query: 228 QDVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEY 407
           Q+VLLGANGGVLVFEPNDF+VK+GETITFKNNAG+PHNVVFDEDAVPSGVDVSKISQEEY
Sbjct: 58  QEVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQEEY 117

Query: 408 LNAPGET 428
           LNAPGET
Sbjct: 118 LNAPGET 124

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>PLAS1_TOBAC (P35476) Plastocyanin A'/A''|
          Length = 99

 Score =  101 bits (251), Expect = 9e-22
 Identities = 49/68 (72%), Positives = 57/68 (83%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEE 404
           +VLLG++ G L F P +FSV AGE ITFKNNAG+PHNVVFDED +P+GVDVSKI  S+EE
Sbjct: 2   EVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDVSKISMSEEE 61

Query: 405 YLNAPGET 428
           YLN PGET
Sbjct: 62  YLNGPGET 69

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>PLAS_MERPE (P00295) Plastocyanin|
          Length = 99

 Score =  100 bits (248), Expect = 2e-21
 Identities = 49/68 (72%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEE-- 404
           DVLLG++ G L F PN+FSV +GE ITFKNNAG+PHNVVFDED +PSGVD SKIS +E  
Sbjct: 2   DVLLGSDDGELAFVPNNFSVPSGEKITFKNNAGFPHNVVFDEDEIPSGVDASKISMDEAD 61

Query: 405 YLNAPGET 428
            LNAPGET
Sbjct: 62  LLNAPGET 69

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>PLAS2_POPNI (P11970) Plastocyanin B, chloroplast precursor|
          Length = 168

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 50/68 (73%), Positives = 57/68 (83%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEE 404
           DVLLGA+ G L F P++FSV AGE I FKNNAG+PHNV+FDEDAVPSGVDVSKI  S+E+
Sbjct: 71  DVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEED 130

Query: 405 YLNAPGET 428
            LNA GET
Sbjct: 131 LLNAKGET 138

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>PLAS_VICFA (P00288) Plastocyanin|
          Length = 99

 Score = 97.8 bits (242), Expect = 9e-21
 Identities = 47/68 (69%), Positives = 55/68 (80%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEE 404
           +VLLGA+ G L F PN F V AG+TI FKNNAG+PHNVVFDED +PSGVD +KIS  +E+
Sbjct: 2   EVLLGASDGGLAFVPNSFEVSAGDTIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMPEED 61

Query: 405 YLNAPGET 428
            LNAPGET
Sbjct: 62  LLNAPGET 69

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>PLAS_DAUCA (P20422) Plastocyanin|
          Length = 97

 Score = 97.8 bits (242), Expect = 9e-21
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYL 410
           +V LGA+ G LVF P+ FSV  GE I+FKNNAG+PHN+VFDED VP+GVDVSKISQE+YL
Sbjct: 2   EVKLGADDGALVFSPSSFSVAKGEGISFKNNAGFPHNIVFDEDEVPAGVDVSKISQEDYL 61

Query: 411 NAPGET 428
           +  GE+
Sbjct: 62  DGAGES 67

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>PLAS_LACSA (P00290) Plastocyanin|
          Length = 99

 Score = 97.4 bits (241), Expect = 1e-20
 Identities = 47/68 (69%), Positives = 57/68 (83%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEE 404
           +VLLG++ G LVFEP+ FSV +GE I FKNNAG+PHNVVFDED +P+GVD SKI  S+E+
Sbjct: 2   EVLLGSSDGGLVFEPSTFSVASGEKIVFKNNAGFPHNVVFDEDEIPAGVDASKISMSEED 61

Query: 405 YLNAPGET 428
            LNAPGET
Sbjct: 62  LLNAPGET 69

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>PLAS_GINBI (P84338) Plastocyanin|
          Length = 99

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEE 404
           +VL+G +GG L F PN+  V AGE I FKNNAG+PHNV+FDEDAVP+GVDVS I  S+E+
Sbjct: 2   EVLMGGSGGELAFIPNELQVNAGEQIVFKNNAGFPHNVIFDEDAVPAGVDVSSISMSEED 61

Query: 405 YLNAPGET 428
            LNAPGET
Sbjct: 62  LLNAPGET 69

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>PLAS_SOLCR (P00297) Plastocyanin|
          Length = 99

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 46/68 (67%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEE 404
           +VLLG++ G L F P +FS+ AGE ITFKNNAG+PHNVVFDED +P+GVD SKIS  +E+
Sbjct: 2   EVLLGSDDGGLAFVPGNFSISAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMPEED 61

Query: 405 YLNAPGET 428
            LNAPGET
Sbjct: 62  LLNAPGET 69

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>PLAS_CUCPE (P00292) Plastocyanin|
          Length = 99

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 2/67 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEE 404
           +VLLG + G L F PNDFSV AGE I FKNNAG+PHNVVFDED +PSGVD  KIS  +E+
Sbjct: 2   EVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMNEED 61

Query: 405 YLNAPGE 425
            LNAPGE
Sbjct: 62  LLNAPGE 68

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>PLAS_PETCR (P17341) Plastocyanins A and B|
          Length = 97

 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 44/66 (66%), Positives = 53/66 (80%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYL 410
           +V LG++ G LVF P+ F+V AGE ITFKNNAG+PHN+VFDED VP+GV+  KISQ EYL
Sbjct: 2   EVKLGSDDGGLVFSPSSFTVAAGEKITFKNNAGFPHNIVFDEDEVPAGVNAEKISQPEYL 61

Query: 411 NAPGET 428
           N  GET
Sbjct: 62  NGAGET 67

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>PLAS2_TOBAC (P35477) Plastocyanin B'/B''|
          Length = 99

 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEE 404
           +VLLG++ G L F P +FSV AGE ITFKNNAG+PHNVVFDED +P+GVD SKI  S+E+
Sbjct: 2   EVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEED 61

Query: 405 YLNAPGET 428
            LN PGET
Sbjct: 62  LLNGPGET 69

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>PLAS_SOLTU (P00296) Plastocyanin|
          Length = 99

 Score = 95.1 bits (235), Expect = 6e-20
 Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEE 404
           DVLLG + G L F P +FSV AGE ITFKNNAG+PHNVVFDED +P+GVD SKIS  +E+
Sbjct: 2   DVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMAEED 61

Query: 405 YLNAPGET 428
            LNA GET
Sbjct: 62  LLNAAGET 69

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>PLAS1_POPNI (P00299) Plastocyanin A, chloroplast precursor|
          Length = 168

 Score = 95.1 bits (235), Expect = 6e-20
 Identities = 45/68 (66%), Positives = 55/68 (80%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEE 404
           DVLLGA+ G L F P++FS+  GE I FKNNAG+PHN+VFDED++PSGVD SKI  S+E+
Sbjct: 71  DVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEED 130

Query: 405 YLNAPGET 428
            LNA GET
Sbjct: 131 LLNAKGET 138

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>PLAS_PHAVU (P00287) Plastocyanin|
          Length = 99

 Score = 94.7 bits (234), Expect = 8e-20
 Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEE 404
           +VLLG+  G LVF P++FSV +GE I FKNNAG+PHNVVFDED +P+GVD  KIS  +EE
Sbjct: 2   EVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEE 61

Query: 405 YLNAPGET 428
            LNAPGET
Sbjct: 62  LLNAPGET 69

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>PLAS_CHLFU (P00300) Plastocyanin|
          Length = 98

 Score = 94.7 bits (234), Expect = 8e-20
 Identities = 41/65 (63%), Positives = 53/65 (81%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLN 413
           V LGA+ G LVFEP+  ++KAGET+T+ NNAG+PHN+VFDED VPSG +   +S E+YLN
Sbjct: 4   VKLGADSGALVFEPSSVTIKAGETVTWVNNAGFPHNIVFDEDEVPSGANAEALSHEDYLN 63

Query: 414 APGET 428
           APGE+
Sbjct: 64  APGES 68

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>PLAS_SPIOL (P00289) Plastocyanin, chloroplast precursor|
          Length = 168

 Score = 94.7 bits (234), Expect = 8e-20
 Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEE 404
           +VLLG   G L F P DFSV +GE I FKNNAG+PHNVVFDED +PSGVD +KI  S+E+
Sbjct: 71  EVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMSEED 130

Query: 405 YLNAPGET 428
            LNAPGET
Sbjct: 131 LLNAPGET 138

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>PLAS_PEA (P16002) Plastocyanin, chloroplast precursor|
          Length = 168

 Score = 94.7 bits (234), Expect = 8e-20
 Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEE 404
           +VLLGA+ G L F P+   V AGETI FKNNAG+PHNVVFDED +P+GVD SKIS  +E+
Sbjct: 71  EVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVDASKISMPEED 130

Query: 405 YLNAPGET 428
            LNAPGET
Sbjct: 131 LLNAPGET 138

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>PLAS_SILPR (P07030) Plastocyanin, chloroplast precursor|
          Length = 165

 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 45/67 (67%), Positives = 56/67 (83%), Gaps = 2/67 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEE 404
           +VLLG++ G L F P+D S+ +GE ITFKNNAG+PHNVVFDED VP+GVDV+KIS  +E+
Sbjct: 68  EVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVDVTKISMPEED 127

Query: 405 YLNAPGE 425
            LNAPGE
Sbjct: 128 LLNAPGE 134

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>PLAS_CAPBU (P00294) Plastocyanin|
          Length = 99

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 46/68 (67%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEE-- 404
           +VLLG   G L F PNDFS+  GE I FKNNAG+PHNVVFDED +PSGVD SKIS +E  
Sbjct: 2   EVLLGGGDGSLAFVPNDFSIAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDEND 61

Query: 405 YLNAPGET 428
            LNA GET
Sbjct: 62  LLNAAGET 69

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>PLAS2_ARATH (P42699) Plastocyanin major isoform, chloroplast precursor|
           (DNA-damage-repair/toleration protein DRT112)
          Length = 167

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 46/68 (67%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEE-- 404
           +VLLG   G L F PNDFS+  GE I FKNNAGYPHNVVFDED +PSGVDV+KIS +E  
Sbjct: 70  EVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDVAKISMDEQD 129

Query: 405 YLNAPGET 428
            LN  GET
Sbjct: 130 LLNGAGET 137

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>PLAS_LYCES (P17340) Plastocyanin, chloroplast precursor|
          Length = 170

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEE 404
           +VLLG + G L F P +FSV AGE ITFKNNAG+PHNVVFDED +P+GVD SKI  S+E+
Sbjct: 73  EVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEED 132

Query: 405 YLNAPGET 428
            LNA GET
Sbjct: 133 LLNAAGET 140

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>PLAS_SAMNI (P00291) Plastocyanin|
          Length = 99

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 45/68 (66%), Positives = 55/68 (80%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEE 404
           ++LLG   G L F P++FSV +GE ITFKNNAG+PHNVVFDED VPSGVD +KI  S+++
Sbjct: 2   EILLGGEDGSLAFIPSNFSVPSGEKITFKNNAGFPHNVVFDEDEVPSGVDSAKISMSEDD 61

Query: 405 YLNAPGET 428
            LNAPGET
Sbjct: 62  LLNAPGET 69

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>PLAS_CHLRE (P18068) Plastocyanin, chloroplast precursor (PC6-2)|
          Length = 145

 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 40/65 (61%), Positives = 52/65 (80%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLN 413
           V LGA+ G L F P   ++K+GET+ F NNAG+PHN+VFDEDA+PSGV+   IS+++YLN
Sbjct: 51  VKLGADSGALEFVPKTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLN 110

Query: 414 APGET 428
           APGET
Sbjct: 111 APGET 115

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>PLAS_SCEOB (P26956) Plastocyanin, chloroplast precursor|
          Length = 145

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 39/66 (59%), Positives = 55/66 (83%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYL 410
           +V LGA+ G LVFEP   ++KAG+++T+ NNAG+PHN+VFDEDAVP+GV+   +S ++YL
Sbjct: 50  NVKLGADSGALVFEPATVTIKAGDSVTWTNNAGFPHNIVFDEDAVPAGVNADALSHDDYL 109

Query: 411 NAPGET 428
           NAPGE+
Sbjct: 110 NAPGES 115

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>PLAS_CUCSA (P00293) Plastocyanin|
          Length = 99

 Score = 91.7 bits (226), Expect = 7e-19
 Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 2/67 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEE 404
           ++LLG + G L F PN+F+V +GE ITFKNNAG+PHNVVFDED +PSGVD  KIS  +E+
Sbjct: 2   EILLGGDDGSLAFVPNNFTVASGEKITFKNNAGFPHNVVFDEDEIPSGVDSGKISMNEED 61

Query: 405 YLNAPGE 425
            L+APG+
Sbjct: 62  LLBAPGZ 68

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>PLAS_RUMOB (P00298) Plastocyanin|
          Length = 99

 Score = 91.3 bits (225), Expect = 9e-19
 Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI--SQEE 404
           ++ LG + G L F P  F+V AGE I FKNNAG+PHN+VFDED VP+GVD SKI  S+E+
Sbjct: 2   EIKLGGDDGALAFVPGSFTVAAGEKIVFKNNAGFPHNIVFDEDEVPAGVDASKISMSEED 61

Query: 405 YLNAPGET 428
            LNAPGET
Sbjct: 62  LLNAPGET 69

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>PLAS1_ARATH (P11490) Plastocyanin minor isoform, chloroplast precursor|
          Length = 171

 Score = 88.6 bits (218), Expect = 6e-18
 Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEE-- 404
           +VLLG++ G L F P++F+V  GE I FKNNAG+PHNVVFDED +PSGVD SKIS +E  
Sbjct: 74  EVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDETA 133

Query: 405 YLNAPGET 428
            LN  GET
Sbjct: 134 LLNGAGET 141

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>PLAS_FRIAG (O22646) Plastocyanin, chloroplast precursor|
          Length = 166

 Score = 88.2 bits (217), Expect = 8e-18
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKIS--QEE 404
           +VLLG + G L F P++  V AGET+ FKNNAG+PHNV+FDED VP GVD   IS  +E+
Sbjct: 69  EVLLGGSDGSLAFVPSNIEVAAGETVVFKNNAGFPHNVLFDEDEVPKGVDAGAISMKEED 128

Query: 405 YLNAPGET 428
            LNAPGET
Sbjct: 129 LLNAPGET 136

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>PLAS_ULVAR (P13133) Plastocyanin|
          Length = 98

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 41/67 (61%), Positives = 49/67 (73%)
 Frame = +3

Query: 228 QDVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEY 407
           Q V LG + G L F P+  SV AGE I F NNAG+PHN+VFDEDAVP+GVD   IS ++Y
Sbjct: 2   QIVKLGGDDGALAFVPSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDY 61

Query: 408 LNAPGET 428
           LN+ GET
Sbjct: 62  LNSKGET 68

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>PLAS_ENTPR (P07465) Plastocyanin|
          Length = 98

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 40/65 (61%), Positives = 50/65 (76%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLN 413
           V LG + G L F PN+ +V AGE+I F NNAG+PHN+VFDEDAVP+GVD   IS E+YLN
Sbjct: 4   VKLGGDDGSLAFVPNNITVGAGESIEFINNAGFPHNIVFDEDAVPAGVDADAISAEDYLN 63

Query: 414 APGET 428
           + G+T
Sbjct: 64  SKGQT 68

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>PLAS_ULVPE (P56274) Plastocyanin|
          Length = 98

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 41/67 (61%), Positives = 49/67 (73%)
 Frame = +3

Query: 228 QDVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEY 407
           Q V LG + G L F P+  SV AGE I F NNAG+PHN+VFDEDAVP+GVD   IS ++Y
Sbjct: 2   QIVKLGGDDGSLAFVPSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDY 61

Query: 408 LNAPGET 428
           LN+ GET
Sbjct: 62  LNSKGET 68

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>PLAS_PHYPA (Q9SXW9) Plastocyanin, chloroplast precursor|
          Length = 168

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 38/65 (58%), Positives = 47/65 (72%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLN 413
           V +G + G L F P D SV AGE++TF NN G+PHNVVFDEDAVP+GV    I+ E+YLN
Sbjct: 74  VKMGGDDGALGFYPKDISVAAGESVTFVNNKGFPHNVVFDEDAVPAGVKTEDINHEDYLN 133

Query: 414 APGET 428
            P E+
Sbjct: 134 GPNES 138

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>PLAS_ANAVT (Q3M9H8) Plastocyanin precursor|
          Length = 139

 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPS-GVDVSK-ISQEEY 407
           V LG++ G+LVFEP   ++K G+T+ F NN   PHNVVFD    P+   D++K +S ++ 
Sbjct: 39  VKLGSDKGLLVFEPAKLTIKPGDTVEFLNNKVPPHNVVFDATLNPAKSADLAKSLSHKQL 98

Query: 408 LNAPGET 428
           L +PG++
Sbjct: 99  LMSPGQS 105

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>PLAS_ANASP (P46444) Plastocyanin precursor|
          Length = 139

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPS-GVDVSK-ISQEEY 407
           V LG++ G+LVFEP   ++K G+T+ F NN   PHNVVFD    P+   D++K +S ++ 
Sbjct: 39  VKLGSDKGLLVFEPAKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQL 98

Query: 408 LNAPGET 428
           L +PG++
Sbjct: 99  LMSPGQS 105

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>PLAS_ANASO (O52830) Plastocyanin precursor|
          Length = 139

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPS-GVDVSK-ISQEEY 407
           V LG++ G+LVFEP   ++K G+T+ F NN   PHNVVFD    P+   D++K +S ++ 
Sbjct: 39  VKLGSDKGLLVFEPAKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQL 98

Query: 408 LNAPGET 428
           L +PG++
Sbjct: 99  LMSPGQS 105

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>PLAS_ANAVA (P0C178) Plastocyanin|
          Length = 105

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPS-GVDVSK-ISQEEY 407
           V LG++ G+LVFEP   ++K G+T+ F NN   PHNVVFD    P+   D++K +S ++ 
Sbjct: 5   VKLGSDKGLLVFEPAKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQL 64

Query: 408 LNAPGET 428
           L +PG++
Sbjct: 65  LMSPGQS 71

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>PLAS_PHOLA (Q51883) Plastocyanin precursor|
          Length = 139

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVD--VSKISQEEY 407
           V +GA+ G+L FEP + +V  G+T+ + NN   PHN++FD+  VP        K+S  + 
Sbjct: 39  VKMGADSGLLQFEPANVTVHPGDTVKWVNNKLPPHNILFDDKQVPGASKELADKLSHSQL 98

Query: 408 LNAPGET 428
           + +PGE+
Sbjct: 99  MFSPGES 105

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>PLAS_SYNY3 (P21697) Plastocyanin precursor|
          Length = 126

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 26/65 (40%), Positives = 40/65 (61%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLN 413
           V +G++ G LVFEP+  ++KAGE + + NN   PHN+VF  D V +    +K+S +    
Sbjct: 33  VKMGSDSGALVFEPSTVTIKAGEEVKWVNNKLSPHNIVFAADGVDADT-AAKLSHKGLAF 91

Query: 414 APGET 428
           A GE+
Sbjct: 92  AAGES 96

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>PLAS_SYNP7 (P55020) Plastocyanin precursor|
          Length = 125

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 22/65 (33%), Positives = 38/65 (58%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLN 413
           + +GA+ G+L FEP+   ++AG+T+ + NN   PHNVV +           ++S ++   
Sbjct: 39  IKMGADNGMLAFEPSTIEIQAGDTVQWVNNKLAPHNVVVEGQ--------PELSHKDLAF 90

Query: 414 APGET 428
           +PGET
Sbjct: 91  SPGET 95

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>PLAS_PROHO (P50057) Plastocyanin precursor|
          Length = 131

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 22/63 (34%), Positives = 35/63 (55%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEYLN 413
           + +G +    ++EP   S+ AG+T+ F  N   PHNV+FD+  VP+G     +S  +   
Sbjct: 39  IKMGTDKYAPLYEPKALSISAGDTVEFVMNKVGPHNVIFDK--VPAGESAPALSNTKLAI 96

Query: 414 APG 422
           APG
Sbjct: 97  APG 99

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>PLAS_THAOC (P84800) Plastocyanin (Fragments)|
          Length = 38

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 25/49 (51%), Positives = 30/49 (61%)
 Frame = +3

Query: 231 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGV 377
           +V +GA+GG+LVFEP     KAG           PHNVVFDED +P GV
Sbjct: 5   EVKMGADGGLLVFEP----AKAG-----------PHNVVFDEDNIPPGV 38

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>AZUP_ACHCY (P19567) Pseudoazurin precursor (Blue copper protein)|
          Length = 152

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
 Frame = +3

Query: 255 GVLVFEPNDFSVKAGETITF-KNNAGYPHNVVFDEDAVPSGVDV--SKISQ--EEYLNAP 419
           G +VFEP    V  G+T+TF   + G  HNV   +  +P G +   SKI++  +    AP
Sbjct: 42  GAMVFEPASLKVAPGDTVTFIPTDKG--HNVETIKGMIPDGAEAFKSKINENYKVTFTAP 99

Query: 420 G 422
           G
Sbjct: 100 G 100

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>PLAS_DRYCA (Q7SIB8) Plastocyanin|
          Length = 102

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +3

Query: 234 VLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKI 392
           V +G   G   F P+  +V AGE + F       HN+VFD  A   G   S++
Sbjct: 3   VEVGDEVGNFKFYPDSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASEL 55

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>AMCY_PARDE (P22364) Amicyanin precursor|
          Length = 131

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
 Frame = +3

Query: 246 ANGGVLV------FEPNDFSVKAGETITFKNNAGYPHNVVF 350
           A+G ++V      +E  +  VK G+T+T+ N    PHNV F
Sbjct: 43  ADGAIVVDIAKMKYETPELHVKVGDTVTWINREAMPHNVHF 83

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>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -1

Query: 424  SPGALRYSSWEILETSTPEGTASSSNTTLCGYPALFLKVMVSPALT-LKSLGSNTSTPP 251
            S G  + S   I E+S P G  S+SNTT  G PA      V+P+ T L +  S   TPP
Sbjct: 1257 SGGGSKPSYEAIPESSPPSGITSASNTT-PGEPAASSSRPVAPSGTALSTTSSKLETPP 1314

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>AZUP_RHILV (Q52825) Putative pseudoazurin precursor (Blue copper protein)|
          Length = 152

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 255 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGV-DVSKISQEEY 407
           G +VFEP    +  G+T+TF       HNV   +  +P GV D      E+Y
Sbjct: 37  GAMVFEPGFLKIAPGDTVTF-IPTDKSHNVETFKGLIPDGVPDFKSKPNEQY 87

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>AZUP_ALCFA (P04377) Pseudoazurin precursor (Cupredoxin) (Blue copper protein)|
          Length = 146

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +3

Query: 255 GVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVD--VSKISQEEYL 410
           G +VFEP       G+T+TF       HNV   +D +P G +   SKI++   L
Sbjct: 37  GAMVFEPAYIKANPGDTVTF-IPVDKGHNVESIKDMIPEGAEKFKSKINENYVL 89

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>HDC_DROME (Q9N2M8) Headcase protein [Contains: Headcase short protein]|
          Length = 1080

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 29  PLHYVASSHGRPLLCSRVXPFLRRRHPHAQQQKQQ 133
           PL+  A  +  PL   ++ P L   HPHAQQ +QQ
Sbjct: 695 PLYNAAIDYSAPLQ-QQINPDLIGAHPHAQQHQQQ 728

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>AMCY_PARVE (P22365) Amicyanin precursor|
          Length = 132

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 279 DFSVKAGETITFKNNAGYPHNVVFDEDAV 365
           + ++KAGET+ + N    PHNV F +  V
Sbjct: 61  EVTIKAGETVYWVNGEVMPHNVAFKKGIV 89

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>AMCY_METEX (P04172) Amicyanin-alpha precursor|
          Length = 119

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 267 FEPNDFSVKAGETITFKNNAGYPHNVVF 350
           F+  +  +KAG  +T+ N    PHNV F
Sbjct: 44  FQTPEVRIKAGSAVTWTNTEALPHNVHF 71

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>EMS_DROME (P18488) Homeotic protein empty spiracles|
          Length = 497

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 23  SPPLHYVAS-SHGRPLLCSRVXPFLRRRHPHAQQQKQQ 133
           SPP H +A  +HG P             HPHAQQQ+QQ
Sbjct: 78  SPPHHLMAPPAHGLPY-----------PHPHAQQQQQQ 104

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>ZIC2_XENLA (Q91689) Zinc finger protein ZIC 2 (Zinc finger protein of the|
           cerebellum 2) (Zinc finger DNA-binding protein fZic)
          Length = 501

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 243 GANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDA 362
           G NGG     P+D S   G+T  F + AGYP + +    A
Sbjct: 82  GPNGGAGASGPHDLS-PPGQTSAFTSQAGYPTSALAPHSA 120

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>YCJV_ECOLI (P77481) Hypothetical ABC transporter ATP-binding protein ycjV|
          Length = 322

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = +3

Query: 249 NGGVLVFEP---NDFSVKAGE-TITFKNNAGYPHNVVFDEDAVPSGVDVSKISQE 401
           +GG L+ +    ND   KA    + F+N A YPH  V+D  A   G+ + KI++E
Sbjct: 57  SGGDLLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAF--GLKMQKIAKE 109

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>HIRA_HUMAN (P54198) HIRA protein (TUP1-like enhancer of split protein 1)|
          Length = 1017

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 153 GKRAQPSCCFCCCA 112
           G  A+PSC +CCCA
Sbjct: 288 GSSAKPSCPYCCCA 301


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,322,813
Number of Sequences: 219361
Number of extensions: 490262
Number of successful extensions: 2169
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 2078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2148
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result