ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags24p22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome... 137 5e-29
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
3dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
4dbj|AK106676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
5gb|AY862466.1| Prunus dulcis clone CPDCT029 microsatellite sequence 44 0.53
6gb|AC025599.8| Homo sapiens chromosome 8, clone RP11-508K19, com... 44 0.53
7gb|AY953371.1| Brevibacillus texasporus strain ATCC PTA-5854 non... 44 0.53
8emb|CT009510.7| Mouse DNA sequence from clone RP23-47H16 on chro... 42 2.1
9gb|AC073182.4| Homo sapiens BAC clone CTD-2012B24 from 7, comple... 42 2.1
10gb|AC107301.10| Homo sapiens 3 BAC RP11-544A22 (Roswell Park Can... 42 2.1
11emb|Z49598.1|SCYJR098C S.cerevisiae chromosome X reading frame O... 42 2.1
12gb|AC161184.5| Mus musculus chromosome 8, clone RP24-210P13, com... 40 8.3
13gb|AC166039.6| Mus musculus chromosome 8, clone RP23-285M10, com... 40 8.3
14gb|AC150753.3| Bos taurus BAC CH240-283G19 (Children's Hospital... 40 8.3
15gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 8.3
16ref|XM_421624.1| PREDICTED: Gallus gallus similar to eukaryotic ... 40 8.3
17gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 8.3
18gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 8.3
19gb|AC134533.3| Mus musculus BAC clone RP24-560C15 from chromosom... 40 8.3
20gb|AC140314.2| Mus musculus BAC clone RP23-395L3 from chromosome... 40 8.3
21gb|AC161244.2| Mus musculus BAC clone RP24-393O16 from chromosom... 40 8.3
22gb|AF188027.5| Homo sapiens chromosome 8 clone RP11-101A8 map q2... 40 8.3
23gb|AC158617.9| Mus musculus 10 BAC RP23-283O2 (Roswell Park Canc... 40 8.3
24gb|AC121909.3| Mus musculus BAC clone RP24-179L9 from chromosome... 40 8.3
25emb|Z93239.1|CEH03A11 Caenorhabditis elegans Fosmid H03A11, comp... 40 8.3
26gb|AC161189.11| Mus musculus chromosome 8, clone RP23-337N9, com... 40 8.3
27ref|XM_645056.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 8.3
28gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complet... 40 8.3
29gb|AC110919.10| Mus musculus chromosome 15, clone RP23-216B8, co... 40 8.3
30gb|AC129174.3| Mus musculus BAC clone RP23-63H3 from chromosome ... 40 8.3
31gb|AC156250.2| Xenopus tropicalis clone ISB1-258K10, complete se... 40 8.3
32gb|AC156251.2| Xenopus tropicalis clone ISB1-273O4, complete seq... 40 8.3
33gb|CP000001.1| Bacillus cereus E33L, complete genome 40 8.3
34gb|AC157555.9| Mus musculus chromosome 5, clone RP24-221I6, comp... 40 8.3
35emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic D... 40 8.3
36emb|AL662793.10| Mouse DNA sequence from clone RP23-186D6 on chr... 40 8.3
37gb|AC108457.6| Homo sapiens chromosome 15, clone RP11-94P2, comp... 40 8.3
38gb|AC087627.10| Homo sapiens chromosome 8, clone RP11-641K18, co... 40 8.3
39gb|AC087641.5| Homo sapiens chromosome 15, clone RP11-368J22, co... 40 8.3
40gb|AC010998.14| Homo sapiens chromosome 10 clone RP11-95I16, com... 40 8.3
41gb|AC006250.4| Arabidopsis thaliana chromosome 2 clone T6A13 map... 40 8.3
42gb|AC093246.3| Homo sapiens chromosome 5 clone RP11-117L6, compl... 40 8.3
43gb|AC013357.19| Homo sapiens chromosome 10 clone 216j18 map 10q2... 40 8.3
44gb|AC023794.37| Homo sapiens 12 BAC RP11-834C11 (Roswell Park Ca... 40 8.3
45gb|AC026723.5|AC026723 Homo sapiens chromosome 5 clone CTD-2209N... 40 8.3
46gb|AC129197.4| Mus musculus BAC clone RP24-166C17 from chromosom... 40 8.3
47gb|AC151716.5| Mus musculus BAC clone RP23-316A23 from 5, comple... 40 8.3
48gb|AC110206.21| Mus musculus chromosome 19, clone RP23-155H17, c... 40 8.3
49gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 8.3
50gb|AC123625.22| Mus musculus chromosome 3, clone RP23-227N19, co... 40 8.3
51gb|AC133094.4| Mus musculus BAC clone RP23-479K21 from 8, comple... 40 8.3
52gb|AC132334.3| Mus musculus BAC clone RP24-228N8 from 6, complet... 40 8.3
53gb|AF003473.1|AF003473 Plasmodium falciparum erythrocyte membran... 40 8.3
54gb|AC123548.4| Mus musculus BAC clone RP23-441J16 from 6, comple... 40 8.3
55gb|AC109180.20| Mus musculus chromosome 10, clone RP23-13J14, co... 40 8.3
56gb|AC171807.1| Mus musculus chromosome 19, clone wi1-359H5, comp... 40 8.3
57emb|AL929012.4| Mouse DNA sequence from clone RP23-477G20 on chr... 40 8.3
58emb|AL590630.20| Mouse DNA sequence from clone RP23-353A15 on ch... 40 8.3
59emb|AL772377.6| Mouse DNA sequence from clone RP23-141B15 on chr... 40 8.3 
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0028C22, complete sequence
          Length = 154228

 Score =  137 bits (69), Expect = 5e-29
 Identities = 172/201 (85%), Gaps = 9/201 (4%)
 Strand = Plus / Plus

                                                                         
Query: 405   tttgtagtcatccatgcaacgg---tttcaactagtc-agtgtcaactctcactaaacta 460
             ||||||||||||||||||| |    |||||||||||| ||||| | ||||||||  ||||
Sbjct: 82013 tttgtagtcatccatgcaaggtctttttcaactagtctagtgtgagctctcactgtacta 82072

                                                                         
Query: 461   gt--gtgcatggctgacttattttactggtttatactttgtagtaaaaggggaagaaaga 518
             ||  ||||||||||||||| |||||||| | | ||||||||||| |||||||||||||||
Sbjct: 82073 gtaagtgcatggctgacttgttttactgatctttactttgtagt-aaaggggaagaaaga 82131

                                                                         
Query: 519   aggaaagct--tgcctgtatcattctggtctaactgtggccaactctacatgcccaaatc 576
             |||||||||  |   | ||| |||||||||||||||||| ||| |||||||| |||||||
Sbjct: 82132 aggaaagctggtaaatatattattctggtctaactgtggtcaagtctacatgtccaaatc 82191

                                  
Query: 577   ttagctctgcaactgcaaacc 597
             |||| |||||| |||||||||
Sbjct: 82192 ttagatctgcagctgcaaacc 82212
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  137 bits (69), Expect = 5e-29
 Identities = 172/201 (85%), Gaps = 9/201 (4%)
 Strand = Plus / Plus

                                                                            
Query: 405      tttgtagtcatccatgcaacgg---tttcaactagtc-agtgtcaactctcactaaacta 460
                ||||||||||||||||||| |    |||||||||||| ||||| | ||||||||  ||||
Sbjct: 19754746 tttgtagtcatccatgcaaggtctttttcaactagtctagtgtgagctctcactgtacta 19754805

                                                                            
Query: 461      gt--gtgcatggctgacttattttactggtttatactttgtagtaaaaggggaagaaaga 518
                ||  ||||||||||||||| |||||||| | | ||||||||||| |||||||||||||||
Sbjct: 19754806 gtaagtgcatggctgacttgttttactgatctttactttgtagt-aaaggggaagaaaga 19754864

                                                                            
Query: 519      aggaaagct--tgcctgtatcattctggtctaactgtggccaactctacatgcccaaatc 576
                |||||||||  |   | ||| |||||||||||||||||| ||| |||||||| |||||||
Sbjct: 19754865 aggaaagctggtaaatatattattctggtctaactgtggtcaagtctacatgtccaaatc 19754924

                                     
Query: 577      ttagctctgcaactgcaaacc 597
                |||| |||||| |||||||||
Sbjct: 19754925 ttagatctgcagctgcaaacc 19754945
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>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0450E05
          Length = 176553

 Score =  137 bits (69), Expect = 5e-29
 Identities = 172/201 (85%), Gaps = 9/201 (4%)
 Strand = Plus / Plus

                                                                          
Query: 405    tttgtagtcatccatgcaacgg---tttcaactagtc-agtgtcaactctcactaaacta 460
              ||||||||||||||||||| |    |||||||||||| ||||| | ||||||||  ||||
Sbjct: 100432 tttgtagtcatccatgcaaggtctttttcaactagtctagtgtgagctctcactgtacta 100491

                                                                          
Query: 461    gt--gtgcatggctgacttattttactggtttatactttgtagtaaaaggggaagaaaga 518
              ||  ||||||||||||||| |||||||| | | ||||||||||| |||||||||||||||
Sbjct: 100492 gtaagtgcatggctgacttgttttactgatctttactttgtagt-aaaggggaagaaaga 100550

                                                                          
Query: 519    aggaaagct--tgcctgtatcattctggtctaactgtggccaactctacatgcccaaatc 576
              |||||||||  |   | ||| |||||||||||||||||| ||| |||||||| |||||||
Sbjct: 100551 aggaaagctggtaaatatattattctggtctaactgtggtcaagtctacatgtccaaatc 100610

                                   
Query: 577    ttagctctgcaactgcaaacc 597
              |||| |||||| |||||||||
Sbjct: 100611 ttagatctgcagctgcaaacc 100631
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>dbj|AK106676.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A08, full
            insert sequence
          Length = 2360

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 84/96 (87%), Gaps = 2/96 (2%)
 Strand = Plus / Plus

                                                                        
Query: 504  aaaggggaagaaagaaggaaagcttgcc--tgtatcattctggtctaactgtggccaact 561
            |||||||||||||||||||||||| |    | ||| |||||||||||||||||| ||| |
Sbjct: 1738 aaaggggaagaaagaaggaaagctggtaaatatattattctggtctaactgtggtcaagt 1797

                                                
Query: 562  ctacatgcccaaatcttagctctgcaactgcaaacc 597
            ||||||| ||||||||||| |||||| |||||||||
Sbjct: 1798 ctacatgtccaaatcttagatctgcagctgcaaacc 1833
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>gb|AY862466.1| Prunus dulcis clone CPDCT029 microsatellite sequence
          Length = 392

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 503 aaaaggggaagaaagaaggaaa 524
           ||||||||||||||||||||||
Sbjct: 166 aaaaggggaagaaagaaggaaa 187
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>gb|AC025599.8| Homo sapiens chromosome 8, clone RP11-508K19, complete sequence
          Length = 158330

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 504   aaaggggaagaaagaaggaaag 525
             ||||||||||||||||||||||
Sbjct: 34847 aaaggggaagaaagaaggaaag 34826
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>gb|AY953371.1| Brevibacillus texasporus strain ATCC PTA-5854 nonribosomal peptide
            synthetase operon, complete sequence
          Length = 50646

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 27   aatgaagtattgatgcaaaaga 48
            ||||||||||||||||||||||
Sbjct: 8125 aatgaagtattgatgcaaaaga 8146
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>emb|CT009510.7| Mouse DNA sequence from clone RP23-47H16 on chromosome 14, complete
             sequence
          Length = 209623

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 214   ttcattctttttgggtttttctata 238
             ||||||||||||||| |||||||||
Sbjct: 85699 ttcattctttttgggattttctata 85723
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>gb|AC073182.4| Homo sapiens BAC clone CTD-2012B24 from 7, complete sequence
          Length = 122912

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 502   taaaaggggaagaaagaagga 522
             |||||||||||||||||||||
Sbjct: 86015 taaaaggggaagaaagaagga 86035
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>gb|AC107301.10| Homo sapiens 3 BAC RP11-544A22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188000

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 337    attcatttgttaaaatgaatt 357
              |||||||||||||||||||||
Sbjct: 123096 attcatttgttaaaatgaatt 123116
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>emb|Z49598.1|SCYJR098C S.cerevisiae chromosome X reading frame ORF YJR098c
          Length = 2641

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 504  aaaggggaagaaagaaggaaa 524
            |||||||||||||||||||||
Sbjct: 2011 aaaggggaagaaagaaggaaa 1991
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>gb|AC161184.5| Mus musculus chromosome 8, clone RP24-210P13, complete sequence
          Length = 156491

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   ctattcatttgttaaaatga 354
             ||||||||||||||||||||
Sbjct: 80608 ctattcatttgttaaaatga 80627
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>gb|AC166039.6| Mus musculus chromosome 8, clone RP23-285M10, complete sequence
          Length = 168321

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    ctattcatttgttaaaatga 354
              ||||||||||||||||||||
Sbjct: 132850 ctattcatttgttaaaatga 132869
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>gb|AC150753.3| Bos taurus  BAC CH240-283G19 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 181464

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      aaaactttaatattttctca 21
              ||||||||||||||||||||
Sbjct: 137725 aaaactttaatattttctca 137706
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 491     atactttgtagtaaaaggggaaga 514
               |||||| |||||||||||||||||
Sbjct: 3281406 atacttagtagtaaaaggggaaga 3281383
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>ref|XM_421624.1| PREDICTED: Gallus gallus similar to eukaryotic translation
           initiation factor 3, subunit 5 epsilon, 47kDa;
           eukaryotic translation initiation factor 3, subunit 5
           (epsilon, 47kD); eIF3-epsilon (LOC423748), mRNA
          Length = 1311

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 caatattaatgaccttctga 176
           ||||||||||||||||||||
Sbjct: 912 caatattaatgaccttctga 931
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 491     atactttgtagtaaaaggggaaga 514
               |||||| |||||||||||||||||
Sbjct: 3208964 atacttagtagtaaaaggggaaga 3208941
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 491     atactttgtagtaaaaggggaaga 514
               |||||| |||||||||||||||||
Sbjct: 3209530 atacttagtagtaaaaggggaaga 3209507
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>gb|AC134533.3| Mus musculus BAC clone RP24-560C15 from chromosome 8, complete sequence
          Length = 152896

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   ctattcatttgttaaaatga 354
             ||||||||||||||||||||
Sbjct: 67309 ctattcatttgttaaaatga 67290
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>gb|AC140314.2| Mus musculus BAC clone RP23-395L3 from chromosome 12, complete sequence
          Length = 191322

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 502   taaaaggggaagaaagaaggaaag 525
             ||||| ||||||||||||||||||
Sbjct: 81361 taaaaagggaagaaagaaggaaag 81384
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>gb|AC161244.2| Mus musculus BAC clone RP24-393O16 from chromosome 13, complete sequence
          Length = 201429

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    acaaattttcctattcattt 344
              ||||||||||||||||||||
Sbjct: 176806 acaaattttcctattcattt 176787
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>gb|AF188027.5| Homo sapiens chromosome 8 clone RP11-101A8 map q21.11, complete
            sequence
          Length = 146199

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 504  aaaggggaagaaagaaggaa 523
            ||||||||||||||||||||
Sbjct: 7002 aaaggggaagaaagaaggaa 7021
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>gb|AC158617.9| Mus musculus 10 BAC RP23-283O2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 240410

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 504    aaaggggaagaaagaaggaa 523
              ||||||||||||||||||||
Sbjct: 114798 aaaggggaagaaagaaggaa 114817
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>gb|AC121909.3| Mus musculus BAC clone RP24-179L9 from chromosome 5, complete sequence
          Length = 155771

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 571    caaatcttagctctgcaact 590
              ||||||||||||||||||||
Sbjct: 129695 caaatcttagctctgcaact 129714
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>emb|Z93239.1|CEH03A11 Caenorhabditis elegans Fosmid H03A11, complete sequence
          Length = 25891

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aaactttaatattttctcat 22
             ||||||||||||||||||||
Sbjct: 20697 aaactttaatattttctcat 20716
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>gb|AC161189.11| Mus musculus chromosome 8, clone RP23-337N9, complete sequence
          Length = 186769

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   ctattcatttgttaaaatga 354
             ||||||||||||||||||||
Sbjct: 21677 ctattcatttgttaaaatga 21696
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>ref|XM_645056.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (242.t00012)
            partial mRNA
          Length = 1170

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  atttgttaaaatgaattggt 360
            ||||||||||||||||||||
Sbjct: 1060 atttgttaaaatgaattggt 1041
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>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence
          Length = 206497

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     tttaatattttctcatacaa 26
             ||||||||||||||||||||
Sbjct: 77370 tttaatattttctcatacaa 77351
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>gb|AC110919.10| Mus musculus chromosome 15, clone RP23-216B8, complete sequence
          Length = 228930

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 509    ggaagaaagaaggaaagctt 528
              ||||||||||||||||||||
Sbjct: 155675 ggaagaaagaaggaaagctt 155694
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>gb|AC129174.3| Mus musculus BAC clone RP23-63H3 from chromosome 8, complete sequence
          Length = 209360

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    ctattcatttgttaaaatga 354
              ||||||||||||||||||||
Sbjct: 155474 ctattcatttgttaaaatga 155493



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   ctattcatttgttaaaatga 354
             ||||||||||||||||||||
Sbjct: 59639 ctattcatttgttaaaatga 59658
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>gb|AC156250.2| Xenopus tropicalis clone ISB1-258K10, complete sequence
          Length = 79665

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 418   atgcaacggtttcaactagtcagt 441
             |||||||||||||||| |||||||
Sbjct: 19738 atgcaacggtttcaacaagtcagt 19715
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>gb|AC156251.2| Xenopus tropicalis clone ISB1-273O4, complete sequence
          Length = 52150

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 418   atgcaacggtttcaactagtcagt 441
             |||||||||||||||| |||||||
Sbjct: 48753 atgcaacggtttcaacaagtcagt 48776
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 491     atactttgtagtaaaaggggaaga 514
               |||||| |||||||||||||||||
Sbjct: 3277646 atacttagtagtaaaaggggaaga 3277623
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>gb|AC157555.9| Mus musculus chromosome 5, clone RP24-221I6, complete sequence
          Length = 149599

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 335  ctattcatttgttaaaatga 354
            ||||||||||||||||||||
Sbjct: 9584 ctattcatttgttaaaatga 9603
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>emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence;
              segment 2/4
          Length = 346939

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 111    taaataactttctaatttgatcaa 134
              ||||||| ||||||||||||||||
Sbjct: 322588 taaataaatttctaatttgatcaa 322611
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>emb|AL662793.10| Mouse DNA sequence from clone RP23-186D6 on chromosome 11 Contains two
              novel genes, the Cpeb4 gene for cytoplasmic polyadenylation
              element binding protein 4, the 5' end of a novel gene and
              two CpG islands, complete sequence
          Length = 215152

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    ttcattctttttgggttttt 233
              ||||||||||||||||||||
Sbjct: 137870 ttcattctttttgggttttt 137889
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>gb|AC108457.6| Homo sapiens chromosome 15, clone RP11-94P2, complete sequence
          Length = 160822

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 500   agtaaaaggggaagaaagaaggaa 523
             |||| |||||||||||||||||||
Sbjct: 28065 agtataaggggaagaaagaaggaa 28088
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>gb|AC087627.10| Homo sapiens chromosome 8, clone RP11-641K18, complete sequence
          Length = 170211

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 504   aaaggggaagaaagaaggaa 523
             ||||||||||||||||||||
Sbjct: 73866 aaaggggaagaaagaaggaa 73847
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>gb|AC087641.5| Homo sapiens chromosome 15, clone RP11-368J22, complete sequence
          Length = 178066

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 500    agtaaaaggggaagaaagaaggaa 523
              |||| |||||||||||||||||||
Sbjct: 155322 agtataaggggaagaaagaaggaa 155345
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>gb|AC010998.14| Homo sapiens chromosome 10 clone RP11-95I16, complete sequence
          Length = 146833

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    aaatccaataggacctgaga 67
             ||||||||||||||||||||
Sbjct: 60825 aaatccaataggacctgaga 60844
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>gb|AC006250.4| Arabidopsis thaliana chromosome 2 clone T6A13 map mi398, complete
             sequence
          Length = 110941

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   ttctttttgggtttttctat 237
             ||||||||||||||||||||
Sbjct: 74846 ttctttttgggtttttctat 74827
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>gb|AC093246.3| Homo sapiens chromosome 5 clone RP11-117L6, complete sequence
          Length = 175154

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 472   tgacttattttactggtttatactttgt 499
             |||||||||| |||| ||||||||||||
Sbjct: 84174 tgacttatttaactgctttatactttgt 84147
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>gb|AC013357.19| Homo sapiens chromosome 10 clone 216j18 map 10q25, complete sequence
          Length = 128769

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    aaatccaataggacctgaga 67
             ||||||||||||||||||||
Sbjct: 12185 aaatccaataggacctgaga 12166
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>gb|AC023794.37| Homo sapiens 12 BAC RP11-834C11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 198488

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 504    aaaggggaagaaagaaggaa 523
              ||||||||||||||||||||
Sbjct: 167651 aaaggggaagaaagaaggaa 167670
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>gb|AC026723.5|AC026723 Homo sapiens chromosome 5 clone CTD-2209N14, complete sequence
          Length = 131999

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    aaaatgaagtattgatgcaa 44
             ||||||||||||||||||||
Sbjct: 56903 aaaatgaagtattgatgcaa 56922
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>gb|AC129197.4| Mus musculus BAC clone RP24-166C17 from chromosome 8, complete sequence
          Length = 143796

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    ctattcatttgttaaaatga 354
              ||||||||||||||||||||
Sbjct: 101361 ctattcatttgttaaaatga 101342
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>gb|AC151716.5| Mus musculus BAC clone RP23-316A23 from 5, complete sequence
          Length = 193466

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 571    caaatcttagctctgcaact 590
              ||||||||||||||||||||
Sbjct: 181224 caaatcttagctctgcaact 181205
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>gb|AC110206.21| Mus musculus chromosome 19, clone RP23-155H17, complete sequence
          Length = 199583

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 509   ggaagaaagaaggaaagctt 528
             ||||||||||||||||||||
Sbjct: 17481 ggaagaaagaaggaaagctt 17462
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 491     atactttgtagtaaaaggggaaga 514
               |||||| |||||||||||||||||
Sbjct: 3208837 atacttagtagtaaaaggggaaga 3208814
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>gb|AC123625.22| Mus musculus chromosome 3, clone RP23-227N19, complete sequence
          Length = 229546

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    aggggaagaaagaaggaaag 525
              ||||||||||||||||||||
Sbjct: 139866 aggggaagaaagaaggaaag 139885
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>gb|AC133094.4| Mus musculus BAC clone RP23-479K21 from 8, complete sequence
          Length = 183826

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   ctattcatttgttaaaatga 354
             ||||||||||||||||||||
Sbjct: 54700 ctattcatttgttaaaatga 54719
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>gb|AC132334.3| Mus musculus BAC clone RP24-228N8 from 6, complete sequence
          Length = 150109

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 443    tcaactctcactaaactagt 462
              ||||||||||||||||||||
Sbjct: 107833 tcaactctcactaaactagt 107814
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>gb|AF003473.1|AF003473 Plasmodium falciparum erythrocyte membrane protein 1 (FCR3S1.2-var1)
            mRNA, complete cds
          Length = 6687

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   agtattgatgcaaaagaaat 51
            ||||||||||||||||||||
Sbjct: 4201 agtattgatgcaaaagaaat 4220
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>gb|AC123548.4| Mus musculus BAC clone RP23-441J16 from 6, complete sequence
          Length = 178488

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   tcaactctcactaaactagt 462
             ||||||||||||||||||||
Sbjct: 11114 tcaactctcactaaactagt 11095
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>gb|AC109180.20| Mus musculus chromosome 10, clone RP23-13J14, complete sequence
          Length = 212628

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 517   gaaggaaagcttgcctgtat 536
             ||||||||||||||||||||
Sbjct: 55827 gaaggaaagcttgcctgtat 55808
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>gb|AC171807.1| Mus musculus chromosome 19, clone wi1-359H5, complete sequence
          Length = 40269

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 509  ggaagaaagaaggaaagctt 528
            ||||||||||||||||||||
Sbjct: 5548 ggaagaaagaaggaaagctt 5567
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>emb|AL929012.4| Mouse DNA sequence from clone RP23-477G20 on chromosome 2, complete
             sequence
          Length = 201304

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 558   aactctacatgcccaaatcttagc 581
             ||||||||||||||| ||||||||
Sbjct: 54860 aactctacatgcccagatcttagc 54883
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>emb|AL590630.20| Mouse DNA sequence from clone RP23-353A15 on chromosome 8, complete
             sequence
          Length = 207705

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   ctattcatttgttaaaatga 354
             ||||||||||||||||||||
Sbjct: 36971 ctattcatttgttaaaatga 36952
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>emb|AL772377.6| Mouse DNA sequence from clone RP23-141B15 on chromosome 2, complete
              sequence
          Length = 217837

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 504    aaaggggaagaaagaaggaa 523
              ||||||||||||||||||||
Sbjct: 119305 aaaggggaagaaagaaggaa 119286


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,217,786
Number of Sequences: 3902068
Number of extensions: 7217786
Number of successful extensions: 169582
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 169098
Number of HSP's gapped (non-prelim): 481
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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