ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25e14 |
|---|---|
| Clone Library Name | barley_pub |
>PHYK2_ORYSA (Q5N9J9) Probable phytol kinase 2, chloroplast precursor (EC| 2.7.-.-) (Fragment) Length = 296 Score = 239 bits (610), Expect = 5e-63 Identities = 117/185 (63%), Positives = 148/185 (80%) Frame = +1 Query: 100 SPLLRDAGAAVLTGCVALAVLRFWEEVGNRALLDQKLCRKLVHISVGLVYFLMWPLFSAD 279 S L D G+A +T VALA+LRF+EE+ R + +QKL RKLVHI++G+V+ L WPLFS+ Sbjct: 60 SGLAHDLGSAAVTAGVALALLRFFEELAKRGVFEQKLNRKLVHITIGMVFLLFWPLFSSG 119 Query: 280 DVYAPFLACIVIALNIVKVTLIGLGVVKDDGVVNSMTRNGDYRELLKGPLYYACTITLTT 459 YAPFLA + +NI+++ L+GLGV+K++ +V SM+R+GD RELLKGPLYYA TIT T Sbjct: 120 S-YAPFLAAVAPGINIIRMLLLGLGVMKNEAMVKSMSRSGDPRELLKGPLYYATTITFAT 178 Query: 460 VIFWRTSPISIAVICNLCAGDGVADIAGRRYGHVKLPHNPDKSYAGSIAMFFAGFIASIL 639 IFWRTSPI+IA+ICNLCAGDG+ADI GRR G KLP+NP+KSYAGSIAM AGF+ASI Sbjct: 179 SIFWRTSPIAIALICNLCAGDGIADIVGRRLGQEKLPYNPNKSYAGSIAMALAGFMASIG 238 Query: 640 FMCYF 654 +M YF Sbjct: 239 YMHYF 243
>PHYK3_SOYBN (Q2N2K0) Probable phytol kinase 3, chloroplast precursor (EC| 2.7.-.-) Length = 319 Score = 223 bits (567), Expect = 5e-58 Identities = 110/190 (57%), Positives = 141/190 (74%) Frame = +1 Query: 85 SMWPESPLLRDAGAAVLTGCVALAVLRFWEEVGNRALLDQKLCRKLVHISVGLVYFLMWP 264 +M PL+ D A ++G VAL+ LR ++E R L DQKL RKLVHIS+GL++ L P Sbjct: 78 TMLHHDPLVSDVYATAISGVVALSFLRLFQETAKRDLFDQKLNRKLVHISIGLIFMLCXP 137 Query: 265 LFSADDVYAPFLACIVIALNIVKVTLIGLGVVKDDGVVNSMTRNGDYRELLKGPLYYACT 444 LFS + +A F A ++ +NI ++ +IGLG++KD+ V SM+R GDYRELLKGPLYYA T Sbjct: 138 LFSTE-TWASFFAALIPGINIFRMLVIGLGILKDEATVKSMSRFGDYRELLKGPLYYAAT 196 Query: 445 ITLTTVIFWRTSPISIAVICNLCAGDGVADIAGRRYGHVKLPHNPDKSYAGSIAMFFAGF 624 ITL +I+WRTSPISIA ICNLCAGDG+ADI GRR G K+P+N +KS+AGSIAM AGF Sbjct: 197 ITLAAIIYWRTSPISIAAICNLCAGDGMADIVGRRLGGEKIPYNKNKSFAGSIAMATAGF 256 Query: 625 IASILFMCYF 654 + SI +M YF Sbjct: 257 LTSIGYMWYF 266
>PHYK2_ARATH (Q67ZM7) Probable phytol kinase 2, chloroplast precursor (EC| 2.7.-.-) Length = 307 Score = 221 bits (562), Expect = 2e-57 Identities = 109/207 (52%), Positives = 146/207 (70%) Frame = +1 Query: 34 AAARICGKKA*ALSSCGSMWPESPLLRDAGAAVLTGCVALAVLRFWEEVGNRALLDQKLC 213 +++R K S M+PE+ +L D A +T VA + L FW E+G R + DQKL Sbjct: 49 SSSRFPATKIRKSSLAAVMFPENSVLSDVCAFGVTSIVAFSCLGFWGEIGKRGIFDQKLI 108 Query: 214 RKLVHISVGLVYFLMWPLFSADDVYAPFLACIVIALNIVKVTLIGLGVVKDDGVVNSMTR 393 RKLVHI++GLV+ L WPLFS+ + A +V LNIV++ L+GLGV D+G + SM+R Sbjct: 109 RKLVHINIGLVFMLCWPLFSSG-IQGALFASLVPGLNIVRMLLLGLGVYHDEGTIKSMSR 167 Query: 394 NGDYRELLKGPLYYACTITLTTVIFWRTSPISIAVICNLCAGDGVADIAGRRYGHVKLPH 573 +GD RELLKGPLYY +IT + +W++SPI+IAVICNLCAGDG+ADI GRR+G KLP+ Sbjct: 168 HGDRRELLKGPLYYVLSITSACIYYWKSSPIAIAVICNLCAGDGMADIVGRRFGTEKLPY 227 Query: 574 NPDKSYAGSIAMFFAGFIASILFMCYF 654 N +KS+AGSI M AGF+AS+ +M YF Sbjct: 228 NKNKSFAGSIGMATAGFLASVAYMYYF 254
>PHYK_WHEAT (Q2N2K3) Probable phytol kinase, chloroplast precursor (EC 2.7.-.-)| Length = 300 Score = 166 bits (420), Expect = 6e-41 Identities = 89/210 (42%), Positives = 124/210 (59%) Frame = +1 Query: 25 GLPAAARICGKKA*ALSSCGSMWPESPLLRDAGAAVLTGCVALAVLRFWEEVGNRALLDQ 204 G+PA A AL++ S S LLRD GA +L A +++R ++ + R L+ Q Sbjct: 40 GVPAVAG-------ALAASASTPAASMLLRDGGATLLVTAGAYSLVRAFDALTERRLVQQ 92 Query: 205 KLCRKLVHISVGLVYFLMWPLFSADDVYAPFLACIVIALNIVKVTLIGLGVVKDDGVVNS 384 L RK+VH+ G+ + WPLFS + A F A +V LN V++ GLG D+ +V S Sbjct: 93 SLSRKVVHVLSGVFFMASWPLFS-NSTSARFFAAVVPFLNCVRLLTYGLGFYSDEALVKS 151 Query: 385 MTRNGDYRELLKGPLYYACTITLTTVIFWRTSPISIAVICNLCAGDGVADIAGRRYGHVK 564 +TR G ELL+GPLYY + + ++FWR SPI I + + GDG ADI GRR+G +K Sbjct: 152 VTREGKREELLRGPLYYVIVLLIIVLVFWRDSPIGIVSLSMMSGGDGFADIVGRRFGSLK 211 Query: 565 LPHNPDKSYAGSIAMFFAGFIASILFMCYF 654 LP N KS+ GS AMF +GF+ S L + YF Sbjct: 212 LPFNKKKSWVGSAAMFISGFLLSALMLSYF 241
>PHYK1_SOYBN (Q2N2K1) Probable phytol kinase 1, chloroplast precursor (EC| 2.7.-.-) Length = 302 Score = 160 bits (405), Expect = 3e-39 Identities = 80/183 (43%), Positives = 120/183 (65%) Frame = +1 Query: 106 LLRDAGAAVLTGCVALAVLRFWEEVGNRALLDQKLCRKLVHISVGLVYFLMWPLFSADDV 285 LL +AGA V A++R ++E+ R +L Q L RKLVHI GL++ + WP+FS + Sbjct: 65 LLYNAGATVGVLGGGYALVRAFDELTRRNILQQGLSRKLVHILSGLLFLVSWPIFS-NSP 123 Query: 286 YAPFLACIVIALNIVKVTLIGLGVVKDDGVVNSMTRNGDYRELLKGPLYYACTITLTTVI 465 A + A V +N +++ + GL + D+G++ S+TR GD ELL+GPLYY + L+ ++ Sbjct: 124 KARYFAAFVPLVNCLRLLVNGLSLASDEGLIKSVTREGDPLELLRGPLYYVLILILSALV 183 Query: 466 FWRTSPISIAVICNLCAGDGVADIAGRRYGHVKLPHNPDKSYAGSIAMFFAGFIASILFM 645 FWR SPI + + +CAGDG+ADI GRRYG +K+P+N KS AGS++M GF+ SI + Sbjct: 184 FWRESPIGVISLAMMCAGDGIADIIGRRYGSMKIPYNEHKSLAGSMSMLVFGFLVSIGML 243 Query: 646 CYF 654 Y+ Sbjct: 244 YYY 246
>PHYK1_ORYSA (Q7XR51) Probable phytol kinase 1, chloroplast precursor (EC| 2.7.-.-) Length = 314 Score = 158 bits (399), Expect = 2e-38 Identities = 79/182 (43%), Positives = 115/182 (63%) Frame = +1 Query: 109 LRDAGAAVLTGCVALAVLRFWEEVGNRALLDQKLCRKLVHISVGLVYFLMWPLFSADDVY 288 LRD A +L A +++R ++ + R L++Q L RK+VH+ G+++ WPLFS + Sbjct: 74 LRDCAATLLITAGAYSLVRAFDGLTARRLIEQNLSRKIVHVLSGVLFMSSWPLFS-NSTE 132 Query: 289 APFLACIVIALNIVKVTLIGLGVVKDDGVVNSMTRNGDYRELLKGPLYYACTITLTTVIF 468 A F A IV LN +++ GL + D+ +V S+TR G ELL+GPLYY + ++ ++F Sbjct: 133 ARFFAAIVPLLNCIRLLTYGLRLSTDEALVKSVTREGKPEELLRGPLYYVIVLLVSVLVF 192 Query: 469 WRTSPISIAVICNLCAGDGVADIAGRRYGHVKLPHNPDKSYAGSIAMFFAGFIASILFMC 648 WR SPI I + + GDG ADI GRRYG KLP N +KS+ GSI+MF +GF+ S L + Sbjct: 193 WRQSPIGIVSLSMMSGGDGFADIVGRRYGSAKLPFNENKSWIGSISMFISGFLLSALMLF 252 Query: 649 YF 654 YF Sbjct: 253 YF 254
>PHYK_MAIZE (Q2N2K4) Probable phytol kinase, chloroplast precursor (EC 2.7.-.-)| Length = 303 Score = 158 bits (399), Expect = 2e-38 Identities = 77/183 (42%), Positives = 116/183 (63%) Frame = +1 Query: 106 LLRDAGAAVLTGCVALAVLRFWEEVGNRALLDQKLCRKLVHISVGLVYFLMWPLFSADDV 285 +L+D VL A +++R ++E+ R L+++ L RK+VH+ G+++ WPLFS + Sbjct: 60 VLQDGAVTVLITAGAYSLVRVFDELTERRLIEKSLSRKVVHVLSGVLFMSSWPLFS-NST 118 Query: 286 YAPFLACIVIALNIVKVTLIGLGVVKDDGVVNSMTRNGDYRELLKGPLYYACTITLTTVI 465 A + A +V LN +++ + GL + D+ +V S+TR G ELL+GPLYY + + ++ Sbjct: 119 EARYFAAVVPFLNSMRLLIYGLRLYTDEALVKSVTREGKPEELLRGPLYYVLVLLFSVLV 178 Query: 466 FWRTSPISIAVICNLCAGDGVADIAGRRYGHVKLPHNPDKSYAGSIAMFFAGFIASILFM 645 FWR SPI I + + GDG ADI GRRYG KLP N KS+AGSI+MF +GF+ S + M Sbjct: 179 FWRESPIGIVSLSMMSGGDGFADIVGRRYGSAKLPFNRKKSWAGSISMFISGFLLSAMMM 238 Query: 646 CYF 654 YF Sbjct: 239 LYF 241
>PHYK1_ARATH (Q9LZ76) Phytol kinase 1, chloroplast precursor (EC 2.7.-.-)| (Vitamin E pathway gene 5 protein) Length = 304 Score = 153 bits (387), Expect = 4e-37 Identities = 77/183 (42%), Positives = 112/183 (61%) Frame = +1 Query: 106 LLRDAGAAVLTGCVALAVLRFWEEVGNRALLDQKLCRKLVHISVGLVYFLMWPLFSADDV 285 LL D GA V A A++ +E + R ++ Q L RKLVHI GL++ L WP+FS Sbjct: 67 LLHDVGATVAVLGGAYALVLSFESLTKRNVIQQSLSRKLVHILSGLLFVLAWPIFSGS-T 125 Query: 286 YAPFLACIVIALNIVKVTLIGLGVVKDDGVVNSMTRNGDYRELLKGPLYYACTITLTTVI 465 A + A V +N +++ + GL + + ++ S+TR G ELLKGPL+Y + + V Sbjct: 126 EARYFAAFVPLVNGLRLVINGLSISPNSMLIKSVTREGRAEELLKGPLFYVLALLFSAVF 185 Query: 466 FWRTSPISIAVICNLCAGDGVADIAGRRYGHVKLPHNPDKSYAGSIAMFFAGFIASILFM 645 FWR SPI + + +C GDG+ADI GR++G K+P+NP KS+AGSI+MF GF SI + Sbjct: 186 FWRESPIGMISLAMMCGGDGIADIMGRKFGSTKIPYNPRKSWAGSISMFIFGFFISIALL 245 Query: 646 CYF 654 Y+ Sbjct: 246 YYY 248
>PHYK2_SOYBN (Q2N2K2) Probable phytol kinase 2, chloroplast precursor (EC| 2.7.-.-) Length = 292 Score = 141 bits (356), Expect = 1e-33 Identities = 72/183 (39%), Positives = 110/183 (60%) Frame = +1 Query: 106 LLRDAGAAVLTGCVALAVLRFWEEVGNRALLDQKLCRKLVHISVGLVYFLMWPLFSADDV 285 +L+D VL A +++R ++E+ R L+++ L RK+VH+ G+++ WPLFS + Sbjct: 60 VLQDGAVTVLITAGAYSLVRVFDELTERRLIEKSLSRKVVHVLSGVLFMSSWPLFS-NST 118 Query: 286 YAPFLACIVIALNIVKVTLIGLGVVKDDGVVNSMTRNGDYRELLKGPLYYACTITLTTVI 465 A + A +V LN +++ + GL + D+ + ELL+GPLYY + + ++ Sbjct: 119 EARYFAAVVPFLNSMRLLIYGLRLYTDEAL-----------ELLRGPLYYVLVLLFSVLV 167 Query: 466 FWRTSPISIAVICNLCAGDGVADIAGRRYGHVKLPHNPDKSYAGSIAMFFAGFIASILFM 645 FWR SPI I + + GDG ADI GRRYG KLP N KS+AGSI+MF +GF+ S + M Sbjct: 168 FWRESPIGIVSLSMMSGGDGFADIVGRRYGSAKLPFNRKKSWAGSISMFISGFLLSAMMM 227 Query: 646 CYF 654 YF Sbjct: 228 LYF 230
>SEC59_YEAST (P20048) Dolichol kinase (EC 2.7.1.108)| Length = 519 Score = 35.4 bits (80), Expect = 0.15 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 5/149 (3%) Frame = +1 Query: 214 RKLVHISVGLVYFLMWPLFSADDVYAPFL--ACIVIALNIVKVTLIGLGVVKDDGVVNSM 387 RKL H +++ L+ P F D + I + L+I + L + + + Sbjct: 329 RKLWHF---IIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPL-GSAIELQL 384 Query: 388 TRNGDYRELLKGPL---YYACTITLTTVIFWRTSPISIAVICNLCAGDGVADIAGRRYGH 558 R D R+ GPL Y ++T + SP+ + L GD +A I G+RYG Sbjct: 385 RRFADDRDH-SGPLIISYLYLLFGISTPLLMNNSPMGLI---GLGIGDSLASIIGKRYGR 440 Query: 559 VKLPHNPDKSYAGSIAMFFAGFIASILFM 645 ++ K+ G++A FI ++ + Sbjct: 441 IRW-KGTQKTLEGTLAFIVTSFIVCLVLL 468
>DRTS_TRYBB (Q27783) Bifunctional dihydrofolate reductase-thymidylate synthase| (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] Length = 527 Score = 35.4 bits (80), Expect = 0.15 Identities = 24/86 (27%), Positives = 38/86 (44%) Frame = +1 Query: 160 LRFWEEVGNRALLDQKLCRKLVHISVGLVYFLMWPLFSADDVYAPFLACIVIALNIVKVT 339 + W+ G+RA LD + + +G VY W F AD +++C KV Sbjct: 320 IHIWDGNGSRAFLDSRGLTDYDEMDLGPVYGFQWRHFGAD-----YISC--------KVD 366 Query: 340 LIGLGVVKDDGVVNSMTRNGDYRELL 417 G GV + +V S+ N D R ++ Sbjct: 367 SEGKGVDQIANIVKSLIENPDDRRMI 392
>LAMA_DROME (Q00174) Laminin alpha chain precursor| Length = 3712 Score = 27.3 bits (59), Expect(2) = 1.5 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 5/44 (11%) Frame = +2 Query: 137 PDASPWRCSASGRRSATAPSWTK-----NSAGSWCTSVSGWYIS 253 PD P CS++G + T + K N AG CT + Y S Sbjct: 582 PDCKPCNCSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYS 625 Score = 23.1 bits (48), Expect(2) = 1.5 Identities = 8/25 (32%), Positives = 14/25 (56%) Frame = +3 Query: 282 CLCSISCLHRHCTKHRKGDFDWPRC 356 CLC + R C ++G +++P C Sbjct: 650 CLCQPNFDGRQCDSCKEGFYNFPSC 674
>IKBE_MOUSE (O54910) NF-kappa-B inhibitor epsilon (NF-kappa-BIE)| (I-kappa-B-epsilon) (IkappaBepsilon) (IKB-epsilon) (IKB-E) Length = 364 Score = 31.2 bits (69), Expect = 2.8 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = -1 Query: 627 DESGKEHCDASGVGFVRVVRELHMPVSPPGYVGHTVPCAQIANHSDRNGRRPPKD 463 DE+ CD SG+ +R +R L P + PG C Q H+ + P K+ Sbjct: 9 DEADDSQCD-SGIESLRSLRSLPEPTAAPGSGSSQSGCPQPWRHAPETHKEPEKE 62
>ATS5_MOUSE (Q9R001) ADAMTS-5 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 5) (ADAM-TS 5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (Implantin) Length = 930 Score = 30.4 bits (67), Expect = 4.8 Identities = 18/35 (51%), Positives = 19/35 (54%) Frame = +2 Query: 116 TPALPCSPDASPWRCSASGRRSATAPSWTKNSAGS 220 TPA P P SP S S RRSA AP +SA S Sbjct: 211 TPASPSGPQESPSVHSRSRRRSALAPQLLDHSAFS 245
>Y860_RICPR (P41078) Hypothetical protein RP860| Length = 204 Score = 30.0 bits (66), Expect = 6.3 Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 16/162 (9%) Frame = +1 Query: 214 RKLVHISVGLVYFLMWPLFSADDVYAPFLACIVIALNIVKVTLIGLGVVKDDG------- 372 RK+ HIS +++P+F ++ P +A ++ I +TL L V++ + Sbjct: 12 RKIFHISA-----IIFPMFY---LFVPRIAIALLLFIITSITLY-LDVIRHNNAKIRKFV 62 Query: 373 ------VVNSMTRNGDYRELLKGPLYYACTITLTTVIFWRTSPISIAVICN---LCAGDG 525 ++ NG + L G + LT+++F + VIC+ L D Sbjct: 63 TRFFSKIIRLKENNGTFA--LSGISFMMLGFFLTSILFPKN-----LVICSWLILIISDC 115 Query: 526 VADIAGRRYGHVKLPHNPDKSYAGSIAMFFAGFIASILFMCY 651 +A + G + G + KS AGS F + SIL Y Sbjct: 116 LAALVGIKIGSSL---SNGKSIAGSFTFFVSALFISILVYFY 154
>YT6J_CAEEL (P90838) UPF0027 protein F16A11.2| Length = 505 Score = 30.0 bits (66), Expect = 6.3 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -1 Query: 615 KEHCDASGVG-FVRVVRELHMPVSPPGYVGHTV 520 K CD G+G F+ VR++ S PG VGH++ Sbjct: 51 KFSCDGQGIGGFLPAVRQIANVASLPGIVGHSI 83
>CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor 1 precursor| (Flamingo homolog 2) (hFmi2) Length = 3014 Score = 30.0 bits (66), Expect = 6.3 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +2 Query: 23 LVFLQQPESVEKRLEL*VRVDPCGRRARFSGTPALPCSP--DASPWRCSASGRRSATAPS 196 LV P ++ +RL + CG RAR GT A C P C+A+ + AP+ Sbjct: 92 LVARSAPTALSRRLRARTHLPGCGARARLCGTGARLCGALCFPVPGGCAAAQHSALAAPT 151
>RPGF2_MOUSE (Q8CHG7) Rap guanine nucleotide exchange factor 2 (Neural RAP guanine| nucleotide exchange protein) (nRap GEP) (PDZ domain-containing guanine nucleotide exchange factor 1) (PDZ-GEF1) (Fragment) Length = 1138 Score = 29.6 bits (65), Expect = 8.2 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -1 Query: 555 PVSPPGYVGHTVPCAQIANHSDRNGRRPPKDYGSESYSTRVIERAFE 415 P +PPGYVG +P A R+PP DY +R++ R E Sbjct: 1041 PPTPPGYVG--IPIADFPEGPCHPARKPP-DYNVALQRSRMVARPTE 1084
>NRG_DROME (P20241) Neuroglian precursor| Length = 1302 Score = 29.6 bits (65), Expect = 8.2 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +1 Query: 82 GSMWPESPLLRDAGAAVLTGCVALAVLRFWEEVGNRALLDQK 207 G++W + DA + C A +V R ++GN+ LLD K Sbjct: 192 GNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDVK 233
>AMPL_SOLTU (P31427) Leucine aminopeptidase, chloroplast precursor (EC| 3.4.11.1) (LAP) (Leucyl aminopeptidase) (Proline aminopeptidase) (EC 3.4.11.5) (Prolyl aminopeptidase) Length = 573 Score = 29.6 bits (65), Expect = 8.2 Identities = 21/82 (25%), Positives = 32/82 (39%) Frame = +1 Query: 331 KVTLIGLGVVKDDGVVNSMTRNGDYRELLKGPLYYACTITLTTVIFWRTSPISIAVICNL 510 K+ L+G G+ D G N T G EL+K + A + P + V + Sbjct: 336 KIALVGKGLTFDSGGYNLKTGAGSKIELMKNDMGGAAAVLGAAKALGEIKPRGVEVHFIV 395 Query: 511 CAGDGVADIAGRRYGHVKLPHN 576 A + + AG R G + N Sbjct: 396 AACENMISGAGMRPGDIVTASN 417
>ODO1_AZOVI (P20707) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 943 Score = 29.6 bits (65), Expect = 8.2 Identities = 18/68 (26%), Positives = 32/68 (47%) Frame = -1 Query: 288 IDIICTEQRPHKEIYQPDTDVHQLPAEFLVQEGAVADLLPEAEHRQGDASGEHGSAGVPE 109 ID++C +R H E +P + L + + ++ +L +A ++G S E A V E Sbjct: 456 IDLVCYRRRGHNEADEP-SGTQPLMYQKIAKQPTTRELYADALVKEGSLSQEEVQAKVDE 514 Query: 108 KRALRPHG 85 R +G Sbjct: 515 YRTALDNG 522
>ATU_DROME (Q94546) Another transcription unit protein| Length = 725 Score = 29.6 bits (65), Expect = 8.2 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1 Query: 156 RQGDASGEHGSAGVPEKRALRPHGSTRTQSSSLFSTD 46 R G ASG GVP+K+A + GS + + S +D Sbjct: 234 RSGSASGSGSDVGVPKKKARKASGSDQEKKKSGSDSD 270 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,805,049 Number of Sequences: 219361 Number of extensions: 2032256 Number of successful extensions: 6750 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 6442 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6738 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
