ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags25d14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ASPM_CANFA (P62286) Abnormal spindle-like microcephaly-associate... 32 0.74
2ASPM_FELCA (P62288) Abnormal spindle-like microcephaly-associate... 32 1.3
3ASPM_MACFA (P62291) Abnormal spindle-like microcephaly-associate... 31 1.7
4ASPM_GORGO (P62289) Abnormal spindle-like microcephaly-associate... 31 1.7
5ASPM_PONPY (P62294) Abnormal spindle-like microcephaly-associate... 31 1.7
6ASPM_MACMU (P62292) Abnormal spindle-like microcephaly-associate... 31 1.7
7ASPM_PANTR (P62293) Abnormal spindle-like microcephaly-associate... 31 1.7
8ASPM_HYLLA (P62290) Abnormal spindle-like microcephaly-associate... 31 1.7
9ASPM_HUMAN (Q8IZT6) Abnormal spindle-like microcephaly-associate... 31 1.7
10ASPM_COLGU (P62287) Abnormal spindle-like microcephaly-associate... 31 1.7
11ASPM_SAIBB (P62296) Abnormal spindle-like microcephaly-associate... 31 2.2
12ASPM_AOTVO (P62283) Abnormal spindle-like microcephaly-associate... 31 2.2

>ASPM_CANFA (P62286) Abnormal spindle-like microcephaly-associated protein|
            homolog (Fragment)
          Length = 3452

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 15/36 (41%), Positives = 25/36 (69%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N    C+ +  + +SL LVN+E+++ENK++
Sbjct: 3210 YSWRKKND---CTKIKAIRLSLQLVNREIREENKLY 3242



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>ASPM_FELCA (P62288) Abnormal spindle-like microcephaly-associated protein|
            homolog (Fragment)
          Length = 3461

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N G +   +    +SL LVN+E+++ENK++
Sbjct: 3219 YSWRKKNDGTKIKAI---RLSLQLVNREIREENKLY 3251



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>ASPM_MACFA (P62291) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3476

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N    C+ +  + +SL +VN+E+++ENK++
Sbjct: 3217 YSWRKKND---CTKIKAIRLSLQVVNREIREENKLY 3249



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>ASPM_GORGO (P62289) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3476

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N    C+ +  + +SL +VN+E+++ENK++
Sbjct: 3217 YSWRKKND---CTKIKAIRLSLQVVNREIREENKLY 3249



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>ASPM_PONPY (P62294) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3471

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N    C+ +  + +SL +VN+E+++ENK++
Sbjct: 3212 YSWRKKND---CTKIKAIRLSLQVVNREIREENKLY 3244



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>ASPM_MACMU (P62292) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3479

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N    C+ +  + +SL +VN+E+++ENK++
Sbjct: 3220 YSWRKKND---CTKIKAIRLSLQVVNREIREENKLY 3252



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>ASPM_PANTR (P62293) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3477

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N    C+ +  + +SL +VN+E+++ENK++
Sbjct: 3218 YSWRKKND---CTKIKAIRLSLQVVNREIREENKLY 3250



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>ASPM_HYLLA (P62290) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3477

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N    C+ +  + +SL +VN+E+++ENK++
Sbjct: 3218 YSWRKKND---CTKIKAIRLSLQVVNREIREENKLY 3250



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>ASPM_HUMAN (Q8IZT6) Abnormal spindle-like microcephaly-associated protein|
            (Abnormal spindle protein homolog) (Asp homolog)
          Length = 3477

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N    C+ +  + +SL +VN+E+++ENK++
Sbjct: 3218 YSWRKKND---CTKIKAIRLSLQVVNREIREENKLY 3250



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>ASPM_COLGU (P62287) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3477

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N    C+ +  + +SL +VN+E+++ENK++
Sbjct: 3218 YSWRKKND---CTKIKAIRLSLQVVNREIREENKLY 3250



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>ASPM_SAIBB (P62296) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3469

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N    C+ +  + +SL +VN+E+++ENK++
Sbjct: 3210 YSWRKNND---CTKIKAIRLSLQVVNREIREENKLY 3242



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>ASPM_AOTVO (P62283) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3473

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -3

Query: 264  YSTRKMNQGAQCSHLFDLNVSLILVNQEVKQENKIF 157
            YS RK N    C+ +  + +SL +VN+E+++ENK++
Sbjct: 3214 YSWRKNND---CTKIKAIRLSLQVVNREIREENKLY 3246


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,201,563
Number of Sequences: 219361
Number of extensions: 1092846
Number of successful extensions: 2164
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2164
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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