ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags25d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469973.1| Oryza sativa (japonica cultivar-group), mRNA 680 0.0
2dbj|AK099884.1| Oryza sativa (japonica cultivar-group) cDNA clon... 680 0.0
3dbj|AK069591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 672 0.0
4gb|AY104601.1| Zea mays PCO085879 mRNA sequence 644 0.0
5gb|BT024078.1| Zea mays clone EL01N0521E04 mRNA sequence 636 e-179
6gb|BT016441.1| Zea mays clone Contig274 mRNA sequence 620 e-174
7gb|AY224552.1| Oryza sativa (japonica cultivar-group) isolate 26... 537 e-149
8gb|BT019199.1| Zea mays clone Contig872.F mRNA sequence 379 e-102
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 143 7e-31
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
11gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genom... 143 7e-31
12gb|BT013483.1| Lycopersicon esculentum clone 132166F, mRNA sequence 107 4e-20
13ref|NM_106235.3| Arabidopsis thaliana unknown protein AT1G75850 ... 96 2e-16
14gb|AY020239.1| Oryza sativa microsatellite MRG2564 containing (G... 70 9e-09
15ref|NM_127333.3| Arabidopsis thaliana unknown protein AT2G17790 ... 58 3e-05
16gb|BT008664.1| Arabidopsis thaliana clone RAFL17-18-H21 (R50265)... 58 3e-05
17gb|BT008553.1| Arabidopsis thaliana clone U50265 putative vacuol... 58 3e-05
18gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete seq... 56 1e-04
19emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1... 54 5e-04
20gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana... 46 0.13
21gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complet... 44 0.50
22gb|AC164703.3| Mus musculus BAC clone RP23-266K19 from chromosom... 42 2.0
23emb|AL157892.23| Human DNA sequence from clone RP11-309N24 on ch... 42 2.0
24gb|AC023385.10| Homo sapiens chromosome 8, clone RP11-675P19, co... 42 2.0
25gb|AC157948.5| Mus musculus BAC clone RP23-197K17 from chromosom... 42 2.0
26gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene,... 42 2.0
27gb|AC149283.2| Mus musculus BAC clone RP23-233O21 from 7, comple... 42 2.0
28emb|CT010435.4| Mouse DNA sequence from clone RP23-445H9 on chro... 40 7.7
29emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 i... 40 7.7
30gb|AC122047.4| Mus musculus BAC clone RP24-456A9 from chromosome... 40 7.7
31gb|AC140134.2| Homo sapiens chromosome 5 clone RP11-1319K7, comp... 40 7.7
32gb|AC138866.2| Homo sapiens chromosome 5 clone RP11-1415C14, com... 40 7.7
33gb|AC146949.1| Homo sapiens chromosome 5 clone RP11-1198D22, com... 40 7.7
34gb|AC145138.2| Homo sapiens chromosome 5 clone RP11-1280N14, com... 40 7.7
35gb|AC092729.3| Canis familiaris clone RP81-60B6, complete sequence 40 7.7
36gb|AC145144.2| Homo sapiens chromosome 5 clone RP11-1432L1, comp... 40 7.7
37gb|AC139510.3| Homo sapiens chromosome 5 clone RP11-977J23, comp... 40 7.7
38gb|AC139778.2| Homo sapiens chromosome 5 clone RP11-1012N14, com... 40 7.7
39gb|AC146335.1| Homo sapiens chromosome 5 clone RP11-1305N21, com... 40 7.7
40gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, compl... 40 7.7
41gb|AC138911.2| Homo sapiens chromosome 5 clone RP11-618O22, comp... 40 7.7
42gb|AY324876.1| Homo sapiens lactoperoxidase (LPO) gene, complete... 40 7.7
43ref|XM_790178.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.7
44gb|AC132802.2| Homo sapiens chromosome 5 clone CTC-273M15, compl... 40 7.7
45gb|AC109487.3| Homo sapiens chromosome 5 clone RP11-551B22, comp... 40 7.7
46emb|AL590153.9| Zebrafish DNA sequence from clone RP71-71M17 in ... 40 7.7
47gb|AC182492.2| Pan troglodytes BAC clone CH251-294F23 from chrom... 40 7.7
48gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, compl... 40 7.7
49gb|AC157353.2| Mus musculus BAC clone RP24-236H23 from chromosom... 40 7.7
50gb|AC010237.8|AC010237 Homo sapiens chromosome 5 clone CTC-348J2... 40 7.7
51gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F1... 40 7.7
52gb|AC138940.3| Homo sapiens chromosome 5 clone RP11-704G19, comp... 40 7.7
53dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
54gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, comp... 40 7.7
55gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosom... 40 7.7
56gb|AC139494.2| Homo sapiens chromosome 5 clone RP11-846E15, comp... 40 7.7
57gb|AC118459.2| Homo sapiens chromosome 5 clone RP11-124L9, compl... 40 7.7
58gb|AE004562.1| Pseudomonas aeruginosa PAO1, section 123 of 529 o... 40 7.7
59gb|AC008783.5|AC008783 Homo sapiens chromosome 5 clone CTD-2027E... 40 7.7
60dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
61emb|BX247873.15| Zebrafish DNA sequence from clone CH211-198O12 ... 40 7.7
62emb|AL592077.8| Zebrafish DNA sequence from clone XX-DZ35C18, co... 40 7.7
63emb|AL928956.11| Mouse DNA sequence from clone RP23-74G16 on chr... 40 7.7
64gb|AC004687.1|AC004687 Homo sapiens chromosome 17, clone hRPC.11... 40 7.7
65dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 7.7 
>ref|XM_469973.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2851

 Score =  680 bits (343), Expect = 0.0
 Identities = 513/570 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    gattttaaagnggagcagaattctgtagcacgccttattcacatgttgcacaatgatgat 60
            |||||||| | ||| ||||||||||| || || |||||||||||||||||||||||||| 
Sbjct: 1482 gattttaaggaggaacagaattctgtggcgcgtcttattcacatgttgcacaatgatgac 1541

                                                                        
Query: 61   cacgacgagatgttgaagatcttatgtactgttcagaagcatatacttcagggaggtccc 120
            || || |||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 1542 catgaagagatgttgaagatattatgcaccgttcagaagcatatacttcagggaggtccc 1601

                                                                        
Query: 121  aagcgtctacctttcactgtgccgtccttagtattctccgctctcaagttggtcagacga 180
            ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| || ||
Sbjct: 1602 aagcggctacctttcactgtgccatccttagtattctctgctctcaagttggtccgaaga 1661

                                                                        
Query: 181  ttacaaggtcaagatggagatgtcactggggaggaagttcccgcaactcctaagaagata 240
            ||||||||||||||||| ||||| |  |||||||||||||| ||||| |||||||| |||
Sbjct: 1662 ttacaaggtcaagatggtgatgtaataggggaggaagttcctgcaacgcctaagaaaata 1721

                                                                        
Query: 241  tttcagatcttgcatcagactattgaagcactccaatgtattccttgtccagaattgtct 300
            |||||||||||||||||||| |||||||| |||  |||| |||||| ||| ||| || ||
Sbjct: 1722 tttcagatcttgcatcagaccattgaagctctctcatgtgttccttctcctgaactggct 1781

                                                                        
Query: 301  ctcagactatatctacaatgcgcagaggctgccaatgattgtgatttggaaccggttgct 360
            |||||| ||||||| || || |||||||| ||||||||||||||| ||||||||||||||
Sbjct: 1782 ctcagattatatctgcagtgtgcagaggcggccaatgattgtgatctggaaccggttgct 1841

                                                                        
Query: 361  tatgagttctttactcaagcattcatcttatatgaagaagaaatagcggattctaaggcc 420
            |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 1842 tatgagttctttactcaagcattcatcttatatgaagaagaaattgcggattcaaaggct 1901

                                                                        
Query: 421  caaattactgcacttcacctaataattggaacccttcagcggatgaatatatttggggtg 480
            ||||| |||||| |||| || ||||||||||||||||| |||||||||||||| ||||| 
Sbjct: 1902 caaatcactgcaattcatcttataattggaacccttcaacggatgaatatattcggggtt 1961

                                                                        
Query: 481  gaaaatagagacaccctcactcataagacaacagggtactcagcaaaacttctaaagaag 540
            ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 1962 gaaaatagagataccctgactcacaagacaacagggtactcagcaaaacttctaaagaaa 2021

                                          
Query: 541  cctgatcaatgccgggcagtctatgcatgt 570
            ||||| |||||||| || || |||||||||
Sbjct: 2022 cctgaccaatgccgagcggtttatgcatgt 2051
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>dbj|AK099884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111P21, full
            insert sequence
          Length = 2931

 Score =  680 bits (343), Expect = 0.0
 Identities = 513/570 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    gattttaaagnggagcagaattctgtagcacgccttattcacatgttgcacaatgatgat 60
            |||||||| | ||| ||||||||||| || || |||||||||||||||||||||||||| 
Sbjct: 1574 gattttaaggaggaacagaattctgtggcgcgtcttattcacatgttgcacaatgatgac 1633

                                                                        
Query: 61   cacgacgagatgttgaagatcttatgtactgttcagaagcatatacttcagggaggtccc 120
            || || |||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 1634 catgaagagatgttgaagatattatgcaccgttcagaagcatatacttcagggaggtccc 1693

                                                                        
Query: 121  aagcgtctacctttcactgtgccgtccttagtattctccgctctcaagttggtcagacga 180
            ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| || ||
Sbjct: 1694 aagcggctacctttcactgtgccatccttagtattctctgctctcaagttggtccgaaga 1753

                                                                        
Query: 181  ttacaaggtcaagatggagatgtcactggggaggaagttcccgcaactcctaagaagata 240
            ||||||||||||||||| ||||| |  |||||||||||||| ||||| |||||||| |||
Sbjct: 1754 ttacaaggtcaagatggtgatgtaataggggaggaagttcctgcaacgcctaagaaaata 1813

                                                                        
Query: 241  tttcagatcttgcatcagactattgaagcactccaatgtattccttgtccagaattgtct 300
            |||||||||||||||||||| |||||||| |||  |||| |||||| ||| ||| || ||
Sbjct: 1814 tttcagatcttgcatcagaccattgaagctctctcatgtgttccttctcctgaactggct 1873

                                                                        
Query: 301  ctcagactatatctacaatgcgcagaggctgccaatgattgtgatttggaaccggttgct 360
            |||||| ||||||| || || |||||||| ||||||||||||||| ||||||||||||||
Sbjct: 1874 ctcagattatatctgcagtgtgcagaggcggccaatgattgtgatctggaaccggttgct 1933

                                                                        
Query: 361  tatgagttctttactcaagcattcatcttatatgaagaagaaatagcggattctaaggcc 420
            |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 1934 tatgagttctttactcaagcattcatcttatatgaagaagaaattgcggattcaaaggct 1993

                                                                        
Query: 421  caaattactgcacttcacctaataattggaacccttcagcggatgaatatatttggggtg 480
            ||||| |||||| |||| || ||||||||||||||||| |||||||||||||| ||||| 
Sbjct: 1994 caaatcactgcaattcatcttataattggaacccttcaacggatgaatatattcggggtt 2053

                                                                        
Query: 481  gaaaatagagacaccctcactcataagacaacagggtactcagcaaaacttctaaagaag 540
            ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 2054 gaaaatagagataccctgactcacaagacaacagggtactcagcaaaacttctaaagaaa 2113

                                          
Query: 541  cctgatcaatgccgggcagtctatgcatgt 570
            ||||| |||||||| || || |||||||||
Sbjct: 2114 cctgaccaatgccgagcggtttatgcatgt 2143
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>dbj|AK069591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023M08, full
            insert sequence
          Length = 3011

 Score =  672 bits (339), Expect = 0.0
 Identities = 512/570 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gattttaaagnggagcagaattctgtagcacgccttattcacatgttgcacaatgatgat 60
            |||||||| | ||| ||||||||||| || || |||||||||||||||||||||||||| 
Sbjct: 1642 gattttaaggaggaacagaattctgtggcgcgtcttattcacatgttgcacaatgatgac 1701

                                                                        
Query: 61   cacgacgagatgttgaagatcttatgtactgttcagaagcatatacttcagggaggtccc 120
            || || |||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 1702 catgaagagatgttgaagatattatgcaccgttcagaagcatatacttcagggaggtccc 1761

                                                                        
Query: 121  aagcgtctacctttcactgtgccgtccttagtattctccgctctcaagttggtcagacga 180
            ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| || ||
Sbjct: 1762 aagcggctacctttcactgtgccatccttagtattctctgctctcaagttggtccgaaga 1821

                                                                        
Query: 181  ttacaaggtcaagatggagatgtcactggggaggaagttcccgcaactcctaagaagata 240
            ||||||||||||||||| ||||| |  |||||||||||||| ||||| |||||||| |||
Sbjct: 1822 ttacaaggtcaagatggtgatgtaataggggaggaagttcctgcaacgcctaagaaaata 1881

                                                                        
Query: 241  tttcagatcttgcatcagactattgaagcactccaatgtattccttgtccagaattgtct 300
            |||||||||||||||||||| |||||||| |||  |||| |||||| ||| ||| || ||
Sbjct: 1882 tttcagatcttgcatcagaccattgaagctctctcatgtgttccttctcctgaactggct 1941

                                                                        
Query: 301  ctcagactatatctacaatgcgcagaggctgccaatgattgtgatttggaaccggttgct 360
            |||||| ||||||| || || |||||||| ||||||||||||||| ||||||||||||||
Sbjct: 1942 ctcagattatatctgcagtgtgcagaggcggccaatgattgtgatctggaaccggttgct 2001

                                                                        
Query: 361  tatgagttctttactcaagcattcatcttatatgaagaagaaatagcggattctaaggcc 420
            |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 2002 tatgagttctttactcaagcattcatcttatatgaagaagaaattgcggattcaaaggct 2061

                                                                        
Query: 421  caaattactgcacttcacctaataattggaacccttcagcggatgaatatatttggggtg 480
            ||||| |||||| |||| || ||||||||||||||||| |||||||||||||| ||||| 
Sbjct: 2062 caaatcactgcaattcatcttataattggaacccttcaacggatgaatatattcggggtt 2121

                                                                        
Query: 481  gaaaatagagacaccctcactcataagacaacagggtactcagcaaaacttctaaagaag 540
            ||||||||||  ||||| ||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 2122 gaaaatagaggtaccctgactcacaagacaacagggtactcagcaaaacttctaaagaaa 2181

                                          
Query: 541  cctgatcaatgccgggcagtctatgcatgt 570
            ||||| |||||||| || || |||||||||
Sbjct: 2182 cctgaccaatgccgagcggtttatgcatgt 2211
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>gb|AY104601.1| Zea mays PCO085879 mRNA sequence
          Length = 1686

 Score =  644 bits (325), Expect = 0.0
 Identities = 490/545 (89%)
 Strand = Plus / Plus

                                                                       
Query: 22  tctgtagcacgccttattcacatgttgcacaatgatgatcacgacgagatgttgaagatc 81
           |||||||| || || ||||||||| |||||||||||||||  || |||||| ||||||||
Sbjct: 239 tctgtagcgcgtctcattcacatgctgcacaatgatgatcctgaagagatgctgaagatc 298

                                                                       
Query: 82  ttatgtactgttcagaagcatatacttcagggaggtcccaagcgtctacctttcactgtg 141
           ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 299 ttatgtactgtacagaagcatatacttcagggaggccccaagcgtctaactttcactgtg 358

                                                                       
Query: 142 ccgtccttagtattctccgctctcaagttggtcagacgattacaaggtcaagatggagat 201
           || || |||||||||||  |||| ||| ||||||| ||||||||||| ||||||||||||
Sbjct: 359 ccttcgttagtattctcttctcttaagctggtcaggcgattacaaggccaagatggagat 418

                                                                       
Query: 202 gtcactggggaggaagttcccgcaactcctaagaagatatttcagatcttgcatcagact 261
           |||||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 419 gtcactggggaggatgttcctgcaactccaaagaaaatattccagatattgcatcagact 478

                                                                       
Query: 262 attgaagcactccaatgtattccttgtccagaattgtctctcagactatatctacaatgc 321
           |||||||||||    ||| |||||| |||||| ||  |||| ||||||||| | || || 
Sbjct: 479 attgaagcactttcttgtgttccttctccagagttagctctgagactatatttgcagtgt 538

                                                                       
Query: 322 gcagaggctgccaatgattgtgatttggaaccggttgcttatgagttctttactcaagca 381
           ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 539 gcagaggctgccaatgactgtgatttggaaccagttgcttatgagttctttactcaagcg 598

                                                                       
Query: 382 ttcatcttatatgaagaagaaatagcggattctaaggcccaaattactgcacttcaccta 441
           ||||| |||||||||||||||||  ||||||| ||||| || || |||||| ||||||| 
Sbjct: 599 ttcattttatatgaagaagaaatcacggattcaaaggctcagatcactgcaattcacctg 658

                                                                       
Query: 442 ataattggaacccttcagcggatgaatatatttggggtggaaaatagagacaccctcact 501
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ataattgggacccttcagcggatgaatatatttggggtggaaaatagagacaccctcact 718

                                                                       
Query: 502 cataagacaacagggtactcagcaaaacttctaaagaagcctgatcaatgccgggcagtc 561
           || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 719 cacaagacaacagggtactcagcaaaacttctcaagaagcctgatcaatgccgagcagtc 778

                
Query: 562 tatgc 566
           |||||
Sbjct: 779 tatgc 783
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>gb|BT024078.1| Zea mays clone EL01N0521E04 mRNA sequence
          Length = 2855

 Score =  636 bits (321), Expect = e-179
 Identities = 489/545 (89%)
 Strand = Plus / Plus

                                                                        
Query: 22   tctgtagcacgccttattcacatgttgcacaatgatgatcacgacgagatgttgaagatc 81
            |||||||| || || ||||||||| |||||||||||||||  || |||||| ||||||||
Sbjct: 1567 tctgtagcgcgtctcattcacatgctgcacaatgatgatcctgaagagatgctgaagatc 1626

                                                                        
Query: 82   ttatgtactgttcagaagcatatacttcagggaggtcccaagcgtctacctttcactgtg 141
            ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 1627 ttatgtactgtacagaagcatatacttcagggaggccccaagcgtctaactttcactgtg 1686

                                                                        
Query: 142  ccgtccttagtattctccgctctcaagttggtcagacgattacaaggtcaagatggagat 201
            || || |||||||||||  |||| ||| ||||||| ||||||||||| ||||||||||||
Sbjct: 1687 ccttcgttagtattctcttctcttaagctggtcaggcgattacaaggccaagatggagat 1746

                                                                        
Query: 202  gtcactggggaggaagttcccgcaactcctaagaagatatttcagatcttgcatcagact 261
            |||||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 1747 gtcactggggaggatgttcctgcaactccaaagaaaatattccagatattgcatcagact 1806

                                                                        
Query: 262  attgaagcactccaatgtattccttgtccagaattgtctctcagactatatctacaatgc 321
            |||||||||||    ||| ||||||  ||||| ||  |||| ||||||||| | || || 
Sbjct: 1807 attgaagcactttcttgtgttccttccccagagttagctctgagactatatttgcagtgt 1866

                                                                        
Query: 322  gcagaggctgccaatgattgtgatttggaaccggttgcttatgagttctttactcaagca 381
            ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 1867 gcagaggctgccaatgactgtgatttggaaccagttgcttatgagttctttactcaagcg 1926

                                                                        
Query: 382  ttcatcttatatgaagaagaaatagcggattctaaggcccaaattactgcacttcaccta 441
            ||||| |||||||||||||||||  ||||||| ||||| || || |||||| ||||||| 
Sbjct: 1927 ttcattttatatgaagaagaaatcacggattcaaaggctcagatcactgcaattcacctg 1986

                                                                        
Query: 442  ataattggaacccttcagcggatgaatatatttggggtggaaaatagagacaccctcact 501
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1987 ataattgggacccttcagcggatgaatatatttggggtggaaaatagagacaccctcact 2046

                                                                        
Query: 502  cataagacaacagggtactcagcaaaacttctaaagaagcctgatcaatgccgggcagtc 561
            || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 2047 cacaagacaacagggtactcagcaaaacttctcaagaagcctgatcaatgccgagcagtc 2106

                 
Query: 562  tatgc 566
            |||||
Sbjct: 2107 tatgc 2111
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>gb|BT016441.1| Zea mays clone Contig274 mRNA sequence
          Length = 1532

 Score =  620 bits (313), Expect = e-174
 Identities = 487/545 (89%)
 Strand = Plus / Plus

                                                                       
Query: 22  tctgtagcacgccttattcacatgttgcacaatgatgatcacgacgagatgttgaagatc 81
           |||||||| || || ||||||||| |||||||||||||||  || |||||| ||||||||
Sbjct: 247 tctgtagcgcgtctcattcacatgctgcacaatgatgatcctgaagagatgctgaagatc 306

                                                                       
Query: 82  ttatgtactgttcagaagcatatacttcagggaggtcccaagcgtctacctttcactgtg 141
           ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 307 ttatgtactgtacagaagcatatacttcagggaggccccaagcgtctaactttcactgtg 366

                                                                       
Query: 142 ccgtccttagtattctccgctctcaagttggtcagacgattacaaggtcaagatggagat 201
           || || |||||||||||  |||| ||| ||||||| ||||||||||| ||||||||||||
Sbjct: 367 ccttcgttagtattctcttctcttaagctggtcaggcgattacaaggccaagatggagat 426

                                                                       
Query: 202 gtcactggggaggaagttcccgcaactcctaagaagatatttcagatcttgcatcagact 261
           |||||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 427 gtcactggggaggatgttcctgcaactccaaagaaaatattccagatattgcatcagact 486

                                                                       
Query: 262 attgaagcactccaatgtattccttgtccagaattgtctctcagactatatctacaatgc 321
           |||||||||||    ||| ||||||  ||||| ||  |||| ||||||||| | || || 
Sbjct: 487 attgaagcactttcttgtgttccttccccagagttagctctgagactatatttgcagtgt 546

                                                                       
Query: 322 gcagaggctgccaatgattgtgatttggaaccggttgcttatgagttctttactcaagca 381
           ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 547 gcagaggctgccaatgactgtgatttggaaccagttgcttatgagttctttactcaagcg 606

                                                                       
Query: 382 ttcatcttatatgaagaagaaatagcggattctaaggcccaaattactgcacttcaccta 441
           ||||| |||||||||||||||||  ||||||| ||||| || || |||||| ||||||| 
Sbjct: 607 ttcattttatatgaagaagaaatcacggattcaaaggctcagatcactgcaattcacctg 666

                                                                       
Query: 442 ataattggaacccttcagcggatgaatatatttggggtggaaaatagagacaccctcact 501
           |||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 667 ataattgggacccttcagcggatgaataaattgggggtggaaaatagagacaccctcact 726

                                                                       
Query: 502 cataagacaacagggtactcagcaaaacttctaaagaagcctgatcaatgccgggcagtc 561
           || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 727 cacaagacaacagggtactcagcaaaacttctcaagaagcctgatcaatgccgagcagtc 786

                
Query: 562 tatgc 566
           |||||
Sbjct: 787 tatgc 791
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>gb|AY224552.1| Oryza sativa (japonica cultivar-group) isolate 26540
           vacuolor-sorting protein-like protein mRNA, partial cds
          Length = 645

 Score =  537 bits (271), Expect = e-149
 Identities = 418/466 (89%), Gaps = 1/466 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gattttaaagnggagcagaattctgtagcacgccttattcacatgttgcacaatgatgat 60
           |||||||| | ||| ||||||||||| || || |||||||||||||||||||||||||| 
Sbjct: 181 gattttaaggaggaacagaattctgtggcgcgtcttattcacatgttgcacaatgatgac 240

                                                                       
Query: 61  cacgacgagatgttgaagatcttatgtactgttcagaagcatatacttcagggaggtccc 120
           || || |||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 241 catgaagagatgttgaagatattatgcaccgttcagaagcatatacttcagggaggtccc 300

                                                                       
Query: 121 aagcgtctacctttcactgtgccgtccttagtattctccgctctcaagttggtcagacga 180
           ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| || ||
Sbjct: 301 aagcggctacctttcactgtgccatccttagtattctctgctctcaagttggtccgaaga 360

                                                                       
Query: 181 ttacaaggtcaagatggagatgtcactggggaggaagttcccgcaactcctaagaagata 240
           ||||||||||||||||| ||||| |  |||||||||||||| ||||| |||||||| |||
Sbjct: 361 ttacaaggtcaagatggtgatgtaataggggaggaagttcctgcaacgcctaagaaaata 420

                                                                       
Query: 241 tttcagatcttgcatcagactattgaagcactccaatgtattccttgtccagaattgtct 300
           |||||||||||||||||||| |||||||| |||  |||| |||||| ||| ||| || ||
Sbjct: 421 tttcagatcttgcatcagaccattgaagctctctcatgtgttccttctcctgaactggct 480

                                                                       
Query: 301 ctcagactatatctacaatgcgcagaggctgccaatgattgtgatttggaaccggttgct 360
           |||||| ||||||| || || |||||||| ||||||||||||||| ||||||||||||||
Sbjct: 481 ctcagattatatctgcagtgtgcagaggcggccaatgattgtgatctggaaccggttgct 540

                                                                       
Query: 361 tatgagttctttactcaagcattcatcttatatgaagaagaaatagcggattctaaggcc 420
           |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 541 tatgagttctttactcaagcattcatcttatatgaagaagaaattgcggattcaaaggct 600

                                                         
Query: 421 caaattactgcacttcacctaataattggaacccttcagcggatga 466
           ||||| |||||| |||| || || |||||||||||||| |||||||
Sbjct: 601 caaatcactgcaattcatcttat-attggaacccttcaacggatga 645
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>gb|BT019199.1| Zea mays clone Contig872.F mRNA sequence
          Length = 1093

 Score =  379 bits (191), Expect = e-102
 Identities = 299/335 (89%)
 Strand = Plus / Plus

                                                                       
Query: 232 aagaagatatttcagatcttgcatcagactattgaagcactccaatgtattccttgtcca 291
           ||||| ||||| ||||| |||||||||||||| || |||||    ||| ||||||  |||
Sbjct: 11  aagaaaatattccagatattgcatcagactatcgacgcactttcttgtgttccttcccca 70

                                                                       
Query: 292 gaattgtctctcagactatatctacaatgcgcagaggctgccaatgattgtgatttggaa 351
           || ||  |||| ||||||||| | || || ||||||||||||||||| ||||||||||||
Sbjct: 71  gagttagctctgagactatatttgcattgtgcagaggctgccaatgactgtgatttggaa 130

                                                                       
Query: 352 ccggttgcttatgagttctttactcaagcattcatcttatatgaagaagaaatagcggat 411
           || |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 131 ccagttgcttatgagttctttactcaagcgttcatattatatgaagaagaaatcgcggat 190

                                                                       
Query: 412 tctaaggcccaaattactgcacttcacctaataattggaacccttcagcggatgaatata 471
           || ||||| ||||| |||||| ||||||| |||||||| |||||||||||||||||||||
Sbjct: 191 tcaaaggctcaaatcactgcaattcacctgataattgggacccttcagcggatgaatata 250

                                                                       
Query: 472 tttggggtggaaaatagagacaccctcactcataagacaacagggtactcagcaaaactt 531
           ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 251 tttggggtggaaaatagagacactctcactcacaagacaacagggtactcagcaaaactt 310

                                              
Query: 532 ctaaagaagcctgatcaatgccgggcagtctatgc 566
           || |||||||||||||||||||| ||||| |||||
Sbjct: 311 ctcaagaagcctgatcaatgccgagcagtttatgc 345
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  143 bits (72), Expect = 7e-31
 Identities = 81/84 (96%)
 Strand = Plus / Plus

                                                                            
Query: 326      aggctgccaatgattgtgatttggaaccggttgcttatgagttctttactcaagcattca 385
                |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 33127329 aggcggccaatgattgtgatctggaaccggttgcttatgagttctttactcaagcattca 33127388

                                        
Query: 386      tcttatatgaagaagaaatagcgg 409
                ||||||||||||||||||| ||||
Sbjct: 33127389 tcttatatgaagaagaaattgcgg 33127412



 Score =  135 bits (68), Expect = 2e-28
 Identities = 86/92 (93%)
 Strand = Plus / Plus

                                                                            
Query: 77       agatcttatgtactgttcagaagcatatacttcagggaggtcccaagcgtctacctttca 136
                |||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 33126402 agatattatgcaccgttcagaagcatatacttcagggaggtcccaagcggctacctttca 33126461

                                                
Query: 137      ctgtgccgtccttagtattctccgctctcaag 168
                ||||||| |||||||||||||| |||||||||
Sbjct: 33126462 ctgtgccatccttagtattctctgctctcaag 33126493



 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                            
Query: 408      ggattctaaggcccaaattactgcacttcacctaataattggaacccttcagcggatgaa 467
                |||||| ||||| ||||| |||||| |||| || ||||||||||||||||| ||||||||
Sbjct: 33127597 ggattcaaaggctcaaatcactgcaattcatcttataattggaacccttcaacggatgaa 33127656

                                                                 
Query: 468      tatatttggggtggaaaatagagacaccctcactcataagacaacaggg 516
                |||||| ||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 33127657 tatattcggggttgaaaatagagataccctgactcacaagacaacaggg 33127705



 Score =  111 bits (56), Expect = 3e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                            
Query: 167      agttggtcagacgattacaaggtcaagatggagatgtcactggggaggaagttcccgcaa 226
                |||||||| || ||||||||||||||||||| ||||| |  |||||||||||||| ||||
Sbjct: 33126797 agttggtccgaagattacaaggtcaagatggtgatgtaataggggaggaagttcctgcaa 33126856

                                                
Query: 227      ctcctaagaagatatttcagatcttgcatcag 258
                | |||||||| |||||||||||||||||||||
Sbjct: 33126857 cgcctaagaaaatatttcagatcttgcatcag 33126888



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                            
Query: 1        gattttaaagnggagcagaattctgtagcacgccttattcacatgttgcacaatgatgat 60
                |||||||| | ||| ||||||||||| || || |||||||||||||||||||||||||| 
Sbjct: 33125872 gattttaaggaggaacagaattctgtggcgcgtcttattcacatgttgcacaatgatgac 33125931

                                  
Query: 61       cacgacgagatgttgaag 78
                || || ||||||||||||
Sbjct: 33125932 catgaagagatgttgaag 33125949



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                       
Query: 516      gtactcagcaaaacttctaaagaagcctgatcaatgccgggcagtctatgcatgt 570
                |||||||||||||||||||||||| ||||| |||||||| || || |||||||||
Sbjct: 33127825 gtactcagcaaaacttctaaagaaacctgaccaatgccgagcggtttatgcatgt 33127879
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  143 bits (72), Expect = 7e-31
 Identities = 81/84 (96%)
 Strand = Plus / Plus

                                                                            
Query: 326      aggctgccaatgattgtgatttggaaccggttgcttatgagttctttactcaagcattca 385
                |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 33217839 aggcggccaatgattgtgatctggaaccggttgcttatgagttctttactcaagcattca 33217898

                                        
Query: 386      tcttatatgaagaagaaatagcgg 409
                ||||||||||||||||||| ||||
Sbjct: 33217899 tcttatatgaagaagaaattgcgg 33217922



 Score =  135 bits (68), Expect = 2e-28
 Identities = 86/92 (93%)
 Strand = Plus / Plus

                                                                            
Query: 77       agatcttatgtactgttcagaagcatatacttcagggaggtcccaagcgtctacctttca 136
                |||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 33216912 agatattatgcaccgttcagaagcatatacttcagggaggtcccaagcggctacctttca 33216971

                                                
Query: 137      ctgtgccgtccttagtattctccgctctcaag 168
                ||||||| |||||||||||||| |||||||||
Sbjct: 33216972 ctgtgccatccttagtattctctgctctcaag 33217003



 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                            
Query: 408      ggattctaaggcccaaattactgcacttcacctaataattggaacccttcagcggatgaa 467
                |||||| ||||| ||||| |||||| |||| || ||||||||||||||||| ||||||||
Sbjct: 33218107 ggattcaaaggctcaaatcactgcaattcatcttataattggaacccttcaacggatgaa 33218166

                                                                 
Query: 468      tatatttggggtggaaaatagagacaccctcactcataagacaacaggg 516
                |||||| ||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 33218167 tatattcggggttgaaaatagagataccctgactcacaagacaacaggg 33218215



 Score =  111 bits (56), Expect = 3e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                            
Query: 167      agttggtcagacgattacaaggtcaagatggagatgtcactggggaggaagttcccgcaa 226
                |||||||| || ||||||||||||||||||| ||||| |  |||||||||||||| ||||
Sbjct: 33217307 agttggtccgaagattacaaggtcaagatggtgatgtaataggggaggaagttcctgcaa 33217366

                                                
Query: 227      ctcctaagaagatatttcagatcttgcatcag 258
                | |||||||| |||||||||||||||||||||
Sbjct: 33217367 cgcctaagaaaatatttcagatcttgcatcag 33217398



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                            
Query: 1        gattttaaagnggagcagaattctgtagcacgccttattcacatgttgcacaatgatgat 60
                |||||||| | ||| ||||||||||| || || |||||||||||||||||||||||||| 
Sbjct: 33216382 gattttaaggaggaacagaattctgtggcgcgtcttattcacatgttgcacaatgatgac 33216441

                                  
Query: 61       cacgacgagatgttgaag 78
                || || ||||||||||||
Sbjct: 33216442 catgaagagatgttgaag 33216459



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                       
Query: 516      gtactcagcaaaacttctaaagaagcctgatcaatgccgggcagtctatgcatgt 570
                |||||||||||||||||||||||| ||||| |||||||| || || |||||||||
Sbjct: 33218335 gtactcagcaaaacttctaaagaaacctgaccaatgccgagcggtttatgcatgt 33218389
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>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete
              sequence
          Length = 144487

 Score =  143 bits (72), Expect = 7e-31
 Identities = 81/84 (96%)
 Strand = Plus / Minus

                                                                          
Query: 326    aggctgccaatgattgtgatttggaaccggttgcttatgagttctttactcaagcattca 385
              |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 117226 aggcggccaatgattgtgatctggaaccggttgcttatgagttctttactcaagcattca 117167

                                      
Query: 386    tcttatatgaagaagaaatagcgg 409
              ||||||||||||||||||| ||||
Sbjct: 117166 tcttatatgaagaagaaattgcgg 117143



 Score =  135 bits (68), Expect = 2e-28
 Identities = 86/92 (93%)
 Strand = Plus / Minus

                                                                          
Query: 77     agatcttatgtactgttcagaagcatatacttcagggaggtcccaagcgtctacctttca 136
              |||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 118153 agatattatgcaccgttcagaagcatatacttcagggaggtcccaagcggctacctttca 118094

                                              
Query: 137    ctgtgccgtccttagtattctccgctctcaag 168
              ||||||| |||||||||||||| |||||||||
Sbjct: 118093 ctgtgccatccttagtattctctgctctcaag 118062



 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Minus

                                                                          
Query: 408    ggattctaaggcccaaattactgcacttcacctaataattggaacccttcagcggatgaa 467
              |||||| ||||| ||||| |||||| |||| || ||||||||||||||||| ||||||||
Sbjct: 116958 ggattcaaaggctcaaatcactgcaattcatcttataattggaacccttcaacggatgaa 116899

                                                               
Query: 468    tatatttggggtggaaaatagagacaccctcactcataagacaacaggg 516
              |||||| ||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 116898 tatattcggggttgaaaatagagataccctgactcacaagacaacaggg 116850



 Score =  111 bits (56), Expect = 3e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                          
Query: 167    agttggtcagacgattacaaggtcaagatggagatgtcactggggaggaagttcccgcaa 226
              |||||||| || ||||||||||||||||||| ||||| |  |||||||||||||| ||||
Sbjct: 117758 agttggtccgaagattacaaggtcaagatggtgatgtaataggggaggaagttcctgcaa 117699

                                              
Query: 227    ctcctaagaagatatttcagatcttgcatcag 258
              | |||||||| |||||||||||||||||||||
Sbjct: 117698 cgcctaagaaaatatttcagatcttgcatcag 117667



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                          
Query: 1      gattttaaagnggagcagaattctgtagcacgccttattcacatgttgcacaatgatgat 60
              |||||||| | ||| ||||||||||| || || |||||||||||||||||||||||||| 
Sbjct: 118683 gattttaaggaggaacagaattctgtggcgcgtcttattcacatgttgcacaatgatgac 118624

                                
Query: 61     cacgacgagatgttgaag 78
              || || ||||||||||||
Sbjct: 118623 catgaagagatgttgaag 118606



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                     
Query: 516    gtactcagcaaaacttctaaagaagcctgatcaatgccgggcagtctatgcatgt 570
              |||||||||||||||||||||||| ||||| |||||||| || || |||||||||
Sbjct: 116730 gtactcagcaaaacttctaaagaaacctgaccaatgccgagcggtttatgcatgt 116676
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>gb|BT013483.1| Lycopersicon esculentum clone 132166F, mRNA sequence
          Length = 2778

 Score =  107 bits (54), Expect = 4e-20
 Identities = 186/230 (80%)
 Strand = Plus / Plus

                                                                        
Query: 322  gcagaggctgccaatgattgtgatttggaaccggttgcttatgagttctttactcaagca 381
            |||||||| ||||||||||||||  | |||||| |||||||||| || ||||| ||||| 
Sbjct: 1808 gcagaggcagccaatgattgtgaacttgaaccgattgcttatgaattttttacacaagct 1867

                                                                        
Query: 382  ttcatcttatatgaagaagaaatagcggattctaaggcccaaattactgcacttcaccta 441
            ||  |  |||||||||||||| | ||||||||||| || ||| | |||||| | ||| | 
Sbjct: 1868 tttgtactatatgaagaagaagttgcggattctaaagcgcaagtgactgcaatacacttg 1927

                                                                        
Query: 442  ataattggaacccttcagcggatgaatatatttggggtggaaaatagagacaccctcact 501
            ||||| ||||| |||||   ||||| | | ||||| || || || || || ||| | |||
Sbjct: 1928 ataatcggaactcttcaaaagatgactgtgtttggtgttgagaacagggataccttaact 1987

                                                              
Query: 502  cataagacaacagggtactcagcaaaacttctaaagaagcctgatcaatg 551
            |||||| | |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 1988 cataaggccacagggtattcagcaaaactcctaaagaaacctgatcaatg 2037
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>ref|NM_106235.3| Arabidopsis thaliana unknown protein AT1G75850 mRNA, complete cds
          Length = 2727

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 189/236 (80%)
 Strand = Plus / Plus

                                                                        
Query: 319  tgcgcagaggctgccaatgattgtgatttggaaccggttgcttatgagttctttactcaa 378
            ||||||||||| || | ||| |||||| | || || ||||||||||| || ||||| |||
Sbjct: 1859 tgcgcagaggccgcaagtgactgtgatcttgagcctgttgcttatgaattttttacccaa 1918

                                                                        
Query: 379  gcattcatcttatatgaagaagaaatagcggattctaaggcccaaattactgcacttcac 438
            ||||| || ||||| || |||||||| ||||| || ||||| ||  | |||||  |||| 
Sbjct: 1919 gcatttatgttatacgaggaagaaattgcggactcgaaggcacaggtaactgcgattcat 1978

                                                                        
Query: 439  ctaataattggaacccttcagcggatgaatatatttggggtggaaaatagagacaccctc 498
            || ||  |||||||| | ||  |||| ||| | ||||| || |||||||| |||||| | 
Sbjct: 1979 ctgatcgttggaaccttgcaaaggatcaatgtctttggtgttgaaaatagggacaccttg 2038

                                                                    
Query: 499  actcataagacaacagggtactcagcaaaacttctaaagaagcctgatcaatgccg 554
            || |||||| |||| |||||||||||||  ||||| ||||||||||| ||||||||
Sbjct: 2039 acacataaggcaaccgggtactcagcaaggcttcttaagaagcctgaccaatgccg 2094
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>gb|AY020239.1| Oryza sativa microsatellite MRG2564 containing (GA)X12, closest to
           marker C393A, genomic sequence
          Length = 224

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 462 gatgaatatatttggggtggaaaatagagacaccctcactcataagacaacaggg 516
           |||||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 224 gatgaatatattcggggttgaaaatagagataccctgactcacaagacaacaggg 170



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 516 gtactcagcaaaacttctaaagaagcctgatcaatgccg 554
           |||||||||||||||||||||||| ||||| ||||||||
Sbjct: 50  gtactcagcaaaacttctaaagaaacctgaccaatgccg 12
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>ref|NM_127333.3| Arabidopsis thaliana unknown protein AT2G17790 mRNA, complete cds
          Length = 2700

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 137/173 (79%)
 Strand = Plus / Plus

                                                                        
Query: 379  gcattcatcttatatgaagaagaaatagcggattctaaggcccaaattactgcacttcac 438
            |||| ||||||||| |||||||||||  |||| || ||||||||  | |||||  | || 
Sbjct: 1857 gcatacatcttatacgaagaagaaatttcggactcaaaggcccaggtgactgcgttacaa 1916

                                                                        
Query: 439  ctaataattggaacccttcagcggatgaatatatttggggtggaaaatagagacaccctc 498
            || ||||||||||| || ||| ||||| |  ||||||| || || |||||||| ||  | 
Sbjct: 1917 cttataattggaactctgcagaggatgcaagtatttggtgttgagaatagagatacatta 1976

                                                                 
Query: 499  actcataagacaacagggtactcagcaaaacttctaaagaagcctgatcaatg 551
            || || ||| | || |||||  |||| |||||||||||||| |||||||||||
Sbjct: 1977 acgcacaaggctacggggtatgcagcgaaacttctaaagaaacctgatcaatg 2029
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>gb|BT008664.1| Arabidopsis thaliana clone RAFL17-18-H21 (R50265) putative vacuolar
            sorting protein 35 (At2g17790) mRNA, complete cds
          Length = 2696

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 137/173 (79%)
 Strand = Plus / Plus

                                                                        
Query: 379  gcattcatcttatatgaagaagaaatagcggattctaaggcccaaattactgcacttcac 438
            |||| ||||||||| |||||||||||  |||| || ||||||||  | |||||  | || 
Sbjct: 1857 gcatacatcttatacgaagaagaaatttcggactcaaaggcccaggtgactgcgttacaa 1916

                                                                        
Query: 439  ctaataattggaacccttcagcggatgaatatatttggggtggaaaatagagacaccctc 498
            || ||||||||||| || ||| ||||| |  ||||||| || || |||||||| ||  | 
Sbjct: 1917 cttataattggaactctgcagaggatgcaagtatttggtgttgagaatagagatacatta 1976

                                                                 
Query: 499  actcataagacaacagggtactcagcaaaacttctaaagaagcctgatcaatg 551
            || || ||| | || |||||  |||| |||||||||||||| |||||||||||
Sbjct: 1977 acgcacaaggctacggggtatgcagcgaaacttctaaagaaacctgatcaatg 2029
to top
>gb|BT008553.1| Arabidopsis thaliana clone U50265 putative vacuolar sorting protein
            35 (At2g17790) mRNA, complete cds
          Length = 2395

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 137/173 (79%)
 Strand = Plus / Plus

                                                                        
Query: 379  gcattcatcttatatgaagaagaaatagcggattctaaggcccaaattactgcacttcac 438
            |||| ||||||||| |||||||||||  |||| || ||||||||  | |||||  | || 
Sbjct: 1807 gcatacatcttatacgaagaagaaatttcggactcaaaggcccaggtgactgcgttacaa 1866

                                                                        
Query: 439  ctaataattggaacccttcagcggatgaatatatttggggtggaaaatagagacaccctc 498
            || ||||||||||| || ||| ||||| |  ||||||| || || |||||||| ||  | 
Sbjct: 1867 cttataattggaactctgcagaggatgcaagtatttggtgttgagaatagagatacatta 1926

                                                                 
Query: 499  actcataagacaacagggtactcagcaaaacttctaaagaagcctgatcaatg 551
            || || ||| | || |||||  |||| |||||||||||||| |||||||||||
Sbjct: 1927 acgcacaaggctacggggtatgcagcgaaacttctaaagaaacctgatcaatg 1979
to top
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence
          Length = 116601

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                         
Query: 326   aggctgccaatgattgtgatttggaaccggttgcttatgagttctttactcaagcattca 385
             ||||||| ||||| |||||  | || |||||||||||||| || || ||||| |||||  
Sbjct: 10549 aggctgctaatgactgtgacctcgagccggttgcttatgaatttttcactcaggcatttg 10608

                                     
Query: 386   tcttatatgaagaagaaatagcgg 409
             | ||||||||||||||||| ||||
Sbjct: 10609 tattatatgaagaagaaattgcgg 10632
to top
>emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1, COMPLETE SEQUENCE
          Length = 116729

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                         
Query: 1     gattttaaagnggagcagaattctgtagcacgccttattcacatgttgcacaatgatgat 60
             ||||| |||| ||||||||||||||| ||||| || || || |||||  | |||||||||
Sbjct: 56784 gatttcaaagaggagcagaattctgttgcacgtctgatccaaatgttttataatgatgat 56725

                               
Query: 61    cacgacgagatgttgaag 78
             |  || ||||||||||||
Sbjct: 56724 ccagaagagatgttgaag 56707
to top
>gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana BAC T4O12 from chromosome I,
             complete sequence
          Length = 95870

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 355   gttgcttatgagttctttactcaagcattcatcttatatgaagaagaaatagcgg 409
             ||||||||||| || ||||| |||||||| || ||||| || |||||||| ||||
Sbjct: 28148 gttgcttatgaattttttacccaagcatttatgttatacgaggaagaaattgcgg 28094



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 516   gtactcagcaaaacttctaaagaagcctgatcaatgccg 554
             |||||||||||  ||||| ||||||||||| ||||||||
Sbjct: 27797 gtactcagcaaggcttcttaagaagcctgaccaatgccg 27759
to top
>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence
          Length = 242112

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 75    gaagatcttatgtactgttcagaagc 100
             |||||||||| |||||||||||||||
Sbjct: 86266 gaagatcttaggtactgttcagaagc 86291
to top
>gb|AC164703.3| Mus musculus BAC clone RP23-266K19 from chromosome 7, complete sequence
          Length = 238433

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    agatggagatgtcactgggga 212
              |||||||||||||||||||||
Sbjct: 112833 agatggagatgtcactgggga 112813
to top
>emb|AL157892.23| Human DNA sequence from clone RP11-309N24 on chromosome 10 Contains a
            novel gene, complete sequence
          Length = 25342

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 384  catcttatatgaagaagaaat 404
            |||||||||||||||||||||
Sbjct: 5079 catcttatatgaagaagaaat 5059
to top
>gb|AC023385.10| Homo sapiens chromosome 8, clone RP11-675P19, complete sequence
          Length = 167118

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 524    caaaacttctaaagaagcctg 544
              |||||||||||||||||||||
Sbjct: 118084 caaaacttctaaagaagcctg 118064
to top
>gb|AC157948.5| Mus musculus BAC clone RP23-197K17 from chromosome 7, complete sequence
          Length = 201846

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    agatggagatgtcactgggga 212
              |||||||||||||||||||||
Sbjct: 192031 agatggagatgtcactgggga 192011
to top
>gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene, complete cds,
              alternatively spliced
          Length = 379048

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 524    caaaacttctaaagaagcctg 544
              |||||||||||||||||||||
Sbjct: 113963 caaaacttctaaagaagcctg 113943
to top
>gb|AC149283.2| Mus musculus BAC clone RP23-233O21 from 7, complete sequence
          Length = 223763

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 192  agatggagatgtcactgggga 212
            |||||||||||||||||||||
Sbjct: 8264 agatggagatgtcactgggga 8284
to top
>emb|CT010435.4| Mouse DNA sequence from clone RP23-445H9 on chromosome 12, complete
            sequence
          Length = 183240

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 367  ttctttactcaagcattcat 386
            ||||||||||||||||||||
Sbjct: 2896 ttctttactcaagcattcat 2877
to top
>emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 in linkage group 8,
           complete sequence
          Length = 195545

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 364 gagttctttactcaagcatt 383
           ||||||||||||||||||||
Sbjct: 211 gagttctttactcaagcatt 192
to top
>gb|AC122047.4| Mus musculus BAC clone RP24-456A9 from chromosome 2, complete sequence
          Length = 172110

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   gaatatatttggggtggaaa 484
             ||||||||||||||||||||
Sbjct: 11751 gaatatatttggggtggaaa 11770
to top
>gb|AC140134.2| Homo sapiens chromosome 5 clone RP11-1319K7, complete sequence
          Length = 217820

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    tgtctctcagactatatcta 315
              ||||||||||||||||||||
Sbjct: 216350 tgtctctcagactatatcta 216331



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   tgtctctcagactatatcta 315
             ||||||||||||||||||||
Sbjct: 26252 tgtctctcagactatatcta 26271
to top
>gb|AC138866.2| Homo sapiens chromosome 5 clone RP11-1415C14, complete sequence
          Length = 213824

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   tgtctctcagactatatcta 315
             ||||||||||||||||||||
Sbjct: 33019 tgtctctcagactatatcta 33000
to top
>gb|AC146949.1| Homo sapiens chromosome 5 clone RP11-1198D22, complete sequence
          Length = 205574

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    tgtctctcagactatatcta 315
              ||||||||||||||||||||
Sbjct: 172057 tgtctctcagactatatcta 172076
to top
>gb|AC145138.2| Homo sapiens chromosome 5 clone RP11-1280N14, complete sequence
          Length = 199372

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    tgtctctcagactatatcta 315
              ||||||||||||||||||||
Sbjct: 150981 tgtctctcagactatatcta 150962
to top
>gb|AC092729.3| Canis familiaris clone RP81-60B6, complete sequence
          Length = 165116

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   ggagatgtcactggggagga 215
             ||||||||||||||||||||
Sbjct: 36027 ggagatgtcactggggagga 36008
to top
>gb|AC145144.2| Homo sapiens chromosome 5 clone RP11-1432L1, complete sequence
          Length = 211638

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    tgtctctcagactatatcta 315
              ||||||||||||||||||||
Sbjct: 180763 tgtctctcagactatatcta 180782
to top
>gb|AC139510.3| Homo sapiens chromosome 5 clone RP11-977J23, complete sequence
          Length = 179309

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    tgtctctcagactatatcta 315
              ||||||||||||||||||||
Sbjct: 147542 tgtctctcagactatatcta 147561
to top
>gb|AC139778.2| Homo sapiens chromosome 5 clone RP11-1012N14, complete sequence
          Length = 180014

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   tgtctctcagactatatcta 315
             ||||||||||||||||||||
Sbjct: 11167 tgtctctcagactatatcta 11186
to top
>gb|AC146335.1| Homo sapiens chromosome 5 clone RP11-1305N21, complete sequence
          Length = 194399

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   tgtctctcagactatatcta 315
             ||||||||||||||||||||
Sbjct: 53984 tgtctctcagactatatcta 54003
to top
>gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, complete sequence
          Length = 199996

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    tgtctctcagactatatcta 315
              ||||||||||||||||||||
Sbjct: 120043 tgtctctcagactatatcta 120062
to top
>gb|AC138911.2| Homo sapiens chromosome 5 clone RP11-618O22, complete sequence
          Length = 191992

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   tgtctctcagactatatcta 315
             ||||||||||||||||||||
Sbjct: 10891 tgtctctcagactatatcta 10872
to top
>gb|AY324876.1| Homo sapiens lactoperoxidase (LPO) gene, complete cds
          Length = 33181

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   tattcacatgttgcacaatg 55
            ||||||||||||||||||||
Sbjct: 4247 tattcacatgttgcacaatg 4228
to top
>ref|XM_790178.1| PREDICTED: Strongylocentrotus purpuratus similar to integrase,
            catalytic domain containing protein family member (2N547)
            (LOC590581), mRNA
          Length = 5205

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   agcatatacttcagggaggt 117
            ||||||||||||||||||||
Sbjct: 1518 agcatatacttcagggaggt 1499
to top
>gb|AC132802.2| Homo sapiens chromosome 5 clone CTC-273M15, complete sequence
          Length = 162703

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   tgtctctcagactatatcta 315
             ||||||||||||||||||||
Sbjct: 17804 tgtctctcagactatatcta 17785
to top
>gb|AC109487.3| Homo sapiens chromosome 5 clone RP11-551B22, complete sequence
          Length = 155249

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   tgtctctcagactatatcta 315
             ||||||||||||||||||||
Sbjct: 30965 tgtctctcagactatatcta 30984
to top
>emb|AL590153.9| Zebrafish DNA sequence from clone RP71-71M17 in linkage group 8 Contains
              a novel gene and part of a novel gene for a protein similar
              to mouse silencing mediator of retinoic acid and thyroid
              hormone receptor (SMRT), complete sequence
          Length = 133947

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    gttctttactcaagcattca 385
              ||||||||||||||||||||
Sbjct: 110842 gttctttactcaagcattca 110861
to top
>gb|AC182492.2| Pan troglodytes BAC clone CH251-294F23 from chromosome 5, complete
              sequence
          Length = 179551

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    tgtctctcagactatatcta 315
              ||||||||||||||||||||
Sbjct: 179429 tgtctctcagactatatcta 179448
to top
>gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, complete sequence
          Length = 169137

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    tgtctctcagactatatcta 315
              ||||||||||||||||||||
Sbjct: 127398 tgtctctcagactatatcta 127379
to top
>gb|AC157353.2| Mus musculus BAC clone RP24-236H23 from chromosome 12, complete
             sequence
          Length = 188463

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   ttctttactcaagcattcat 386
             ||||||||||||||||||||
Sbjct: 90012 ttctttactcaagcattcat 90031
to top
>gb|AC010237.8|AC010237 Homo sapiens chromosome 5 clone CTC-348J20, complete sequence
          Length = 168814

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    tgtctctcagactatatcta 315
              ||||||||||||||||||||
Sbjct: 106358 tgtctctcagactatatcta 106377
to top
>gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F17, complete sequence
          Length = 155974

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    tgtctctcagactatatcta 315
              ||||||||||||||||||||
Sbjct: 114314 tgtctctcagactatatcta 114295
to top
>gb|AC138940.3| Homo sapiens chromosome 5 clone RP11-704G19, complete sequence
          Length = 182305

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   tgtctctcagactatatcta 315
             ||||||||||||||||||||
Sbjct: 32132 tgtctctcagactatatcta 32113
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 277      tgtattccttgtccagaatt 296
                ||||||||||||||||||||
Sbjct: 24217160 tgtattccttgtccagaatt 24217179
to top
>gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, complete sequence
          Length = 185457

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   tgtctctcagactatatcta 315
             ||||||||||||||||||||
Sbjct: 88719 tgtctctcagactatatcta 88738
to top
>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete sequence
          Length = 198374

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     gatgttgaagatcttatgta 88
              ||||||||||||||||||||
Sbjct: 156713 gatgttgaagatcttatgta 156694
to top
>gb|AC139494.2| Homo sapiens chromosome 5 clone RP11-846E15, complete sequence
          Length = 210288

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   tgtctctcagactatatcta 315
             ||||||||||||||||||||
Sbjct: 30984 tgtctctcagactatatcta 31003
to top
>gb|AC118459.2| Homo sapiens chromosome 5 clone RP11-124L9, complete sequence
          Length = 146061

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    tgtctctcagactatatcta 315
              ||||||||||||||||||||
Sbjct: 119447 tgtctctcagactatatcta 119466
to top
>gb|AE004562.1| Pseudomonas aeruginosa PAO1, section 123 of 529 of the complete
           genome
          Length = 10602

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 541 cctgatcaatgccgggcagt 560
           ||||||||||||||||||||
Sbjct: 208 cctgatcaatgccgggcagt 227
to top
>gb|AC008783.5|AC008783 Homo sapiens chromosome 5 clone CTD-2027E7, complete sequence
          Length = 100184

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   tgtctctcagactatatcta 315
             ||||||||||||||||||||
Sbjct: 58496 tgtctctcagactatatcta 58515
to top
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2055_H10
          Length = 119290

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   tgtattccttgtccagaatt 296
             ||||||||||||||||||||
Sbjct: 17548 tgtattccttgtccagaatt 17567
to top
>emb|BX247873.15| Zebrafish DNA sequence from clone CH211-198O12 in linkage group 8,
            complete sequence
          Length = 139803

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 364  gagttctttactcaagcatt 383
            ||||||||||||||||||||
Sbjct: 1790 gagttctttactcaagcatt 1809
to top
>emb|AL592077.8| Zebrafish DNA sequence from clone XX-DZ35C18, complete sequence
          Length = 53352

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   tttactcaagcattcatctt 389
             ||||||||||||||||||||
Sbjct: 18518 tttactcaagcattcatctt 18499
to top
>emb|AL928956.11| Mouse DNA sequence from clone RP23-74G16 on chromosome 2, complete
              sequence
          Length = 174347

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    gaatatatttggggtggaaa 484
              ||||||||||||||||||||
Sbjct: 146119 gaatatatttggggtggaaa 146138
to top
>gb|AC004687.1|AC004687 Homo sapiens chromosome 17, clone hRPC.1171_I_10, complete sequence
          Length = 175120

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     tattcacatgttgcacaatg 55
              ||||||||||||||||||||
Sbjct: 172555 tattcacatgttgcacaatg 172574
to top
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 540     gcctgatcaatgccgggcag 559
               ||||||||||||||||||||
Sbjct: 5051747 gcctgatcaatgccgggcag 5051766


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,713,038
Number of Sequences: 3902068
Number of extensions: 4713038
Number of successful extensions: 79383
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79144
Number of HSP's gapped (non-prelim): 227
length of query: 570
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 547
effective length of database: 17,143,297,704
effective search space: 9377383844088
effective search space used: 9377383844088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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